19-51918103-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918103
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918103
    reference: chr 19
allele count: 112
allele frequency: 9.441915359973024e-4
allele num: 118620
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1416G>C
  hgvsp: ENSP00000389132.2:p.Gln472His
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.376C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+332G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1478G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+332G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+332G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+332G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+332G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1590G>C
  hgvsp: ENSP00000345243.4:p.Gln530His
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1590G>C
  hgvsp: ENSP00000348646.5:p.Gln530His
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+332G>C
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21169
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7240
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9281
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13870
  bin: 9.75e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gln530His
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

19-51918105-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918105
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918105
    reference: chr 19
allele count: 2
allele frequency: 1.685686833100147e-5
allele num: 118646
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+330C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1588C>T
  hgvsp: ENSP00000345243.4:p.Gln530Ter
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1588C>T
  hgvsp: ENSP00000348646.5:p.Gln530Ter
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+330C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+330C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1414C>T
  hgvsp: ENSP00000389132.2:p.Gln472Ter
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+330C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.378G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+330C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1476C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+330C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13863
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18483
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Gln530Ter
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-51918108-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918108
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918108
    reference: chr 19
allele count: 1
allele frequency: 8.426445556735258e-6
allele num: 118674
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.381C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+327G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+327G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+327G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1473G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+327G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+327G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1585G>T
  hgvsp: ENSP00000345243.4:p.Ala529Ser
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1585G>T
  hgvsp: ENSP00000348646.5:p.Ala529Ser
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1411G>T
  hgvsp: ENSP00000389132.2:p.Ala471Ser
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+327G>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7223
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21202
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13863
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala529Ser
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

19-51918112-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918112
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918112
    reference: chr 19
allele count: 21278
allele frequency: 1.783062664454388e-1
allele num: 119334
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.385A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1407T>C
  hgvsp: ENST00000439889.2:c.1407T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+323T>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+323T>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+323T>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+323T>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1581T>C
  hgvsp: ENST00000339313.5:c.1581T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1581T>C
  hgvsp: ENST00000356298.5:c.1581T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1469T>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+323T>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+323T>C
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 185
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 7.5e0
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.75e1
  variant carriers: 249
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 224
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 273
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 145
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.25e1
  variant carriers: 246
genotype depth: GenotypeDepth
  all individuals: 9245
  bin: 3.25e1
  variant carriers: 147
genotype depth: GenotypeDepth
  all individuals: 21065
  bin: 2.75e1
  variant carriers: 160
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 262
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.25e1
  variant carriers: 175
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 4.75e1
  variant carriers: 149
genotype depth: GenotypeDepth
  all individuals: 6903
  bin: 2.25e1
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 3.75e1
  variant carriers: 173
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.75e1
  variant carriers: 180
genotype depth: GenotypeDepth
  all individuals: 15939
  bin: 9.75e1
  variant carriers: 15889
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 160
genotype quality: GenotypeQuality
  all individuals: 6333
  bin: 6.75e1
  variant carriers: 17
hgvs: p.His527His
num of homozygotes: 2141
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS

19-51918113-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918113
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918113
    reference: chr 19
allele count: 1
allele frequency: 8.381527114240214e-6
allele num: 119310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+322A>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1580A>T
  hgvsp: ENSP00000345243.4:p.His527Leu
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1580A>T
  hgvsp: ENSP00000348646.5:p.His527Leu
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+322A>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.386T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+322A>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1468A>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1406A>T
  hgvsp: ENSP00000389132.2:p.His469Leu
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+322A>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+322A>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+322A>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12361
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His527Leu
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

19-51918113-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918113
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918113
    reference: chr 19
allele count: 1
allele frequency: 8.381527114240214e-6
allele num: 119310
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+322A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+322A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+322A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1406A>G
  hgvsp: ENSP00000389132.2:p.His469Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1468A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.386T>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1580A>G
  hgvsp: ENSP00000348646.5:p.His527Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1580A>G
  hgvsp: ENSP00000345243.4:p.His527Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+322A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+322A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+322A>G
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12361
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His527Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

19-51918118-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918118
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918118
    reference: chr 19
allele count: 1
allele frequency: 8.375910880308233e-6
allele num: 119390
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.391G>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1575C>T
  hgvsp: ENST00000356298.5:c.1575C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+317C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+317C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1401C>T
  hgvsp: ENST00000439889.2:c.1401C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+317C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+317C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+317C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1575C>T
  hgvsp: ENST00000339313.5:c.1575C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1463C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+317C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2282
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12359
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27327
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn525Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

19-51918118-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918118
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918118
    reference: chr 19
allele count: 2
allele frequency: 1.675182176061647e-5
allele num: 119390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+317C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.391G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+317C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1575C>A
  hgvsp: ENSP00000348646.5:p.Asn525Lys
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+317C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1463C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1575C>A
  hgvsp: ENSP00000345243.4:p.Asn525Lys
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+317C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1401C>A
  hgvsp: ENSP00000389132.2:p.Asn467Lys
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+317C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+317C>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12359
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2282
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn525Lys
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

19-51918125-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918125
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918125
    reference: chr 19
allele count: 1
allele frequency: 8.372544751251695e-6
allele num: 119438
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+310C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1394C>T
  hgvsp: ENSP00000389132.2:p.Ala465Val
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+310C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1568C>T
  hgvsp: ENSP00000348646.5:p.Ala523Val
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1456C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+310C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+310C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+310C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+310C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.398G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1568C>T
  hgvsp: ENSP00000345243.4:p.Ala523Val
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12358
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala523Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

19-51918127-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918127
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918127
    reference: chr 19
allele count: 1
allele frequency: 8.371002846140968e-6
allele num: 119460
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.400C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1392G>A
  hgvsp: ENST00000439889.2:c.1392G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+308G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+308G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+308G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+308G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1566G>A
  hgvsp: ENST00000356298.5:c.1566G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1454G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1566G>A
  hgvsp: ENST00000339313.5:c.1566G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+308G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+308G>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21120
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12358
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu522Glu
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

19-51918134-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918134
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918134
    reference: chr 19
allele count: 1
allele frequency: 8.373386029842748e-6
allele num: 119426
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+301G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+301G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.407C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1385G>A
  hgvsp: ENSP00000389132.2:p.Arg462His
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+301G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1559G>A
  hgvsp: ENSP00000345243.4:p.Arg520His
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1447G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1559G>A
  hgvsp: ENSP00000348646.5:p.Arg520His
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+301G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+301G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+301G>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg520His
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

19-51918135-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918135
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918135
    reference: chr 19
allele count: 1
allele frequency: 8.364840900726069e-6
allele num: 119548
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1558C>T
  hgvsp: ENSP00000348646.5:p.Arg520Cys
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1558C>T
  hgvsp: ENSP00000345243.4:p.Arg520Cys
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+300C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+300C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+300C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+300C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1446C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+300C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1384C>T
  hgvsp: ENSP00000389132.2:p.Arg462Cys
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.408G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+300C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12061
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21112
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg520Cys
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

19-51918135-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918135
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918135
    reference: chr 19
allele count: 21296
allele frequency: 1.781376518218623e-1
allele num: 119548
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+300C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.408G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+300C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1558C>A
  hgvsp: ENSP00000345243.4:p.Arg520Ser
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+300C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+300C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+300C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1558C>A
  hgvsp: ENSP00000348646.5:p.Arg520Ser
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1384C>A
  hgvsp: ENSP00000389132.2:p.Arg462Ser
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+300C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1446C>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.75e1
  variant carriers: 235
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 8.25e1
  variant carriers: 820
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 1.25e1
  variant carriers: 220
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.75e1
  variant carriers: 319
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.25e1
  variant carriers: 222
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 254
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 8.75e1
  variant carriers: 906
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 9.25e1
  variant carriers: 998
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 377
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 7.5e0
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 9250
  bin: 3.25e1
  variant carriers: 165
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 7.75e1
  variant carriers: 660
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.25e1
  variant carriers: 563
genotype depth: GenotypeDepth
  all individuals: 21112
  bin: 2.75e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 6955
  bin: 2.25e1
  variant carriers: 199
genotype depth: GenotypeDepth
  all individuals: 12061
  bin: 9.75e1
  variant carriers: 12027
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.75e1
  variant carriers: 459
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.25e1
  variant carriers: 313
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 3.75e1
  variant carriers: 208
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 7.75e1
  variant carriers: 20
hgvs: p.Arg520Ser
num of homozygotes: 2143
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

19-51918147-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918147
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918147
    reference: chr 19
allele count: 2
allele frequency: 1.678302900107411e-5
allele num: 119168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1372G>A
  hgvsp: ENSP00000389132.2:p.Gly458Ser
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+288G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+288G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1434G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+288G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+288G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+288G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1546G>A
  hgvsp: ENSP00000348646.5:p.Gly516Ser
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+288G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.420C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1546G>A
  hgvsp: ENSP00000345243.4:p.Gly516Ser
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly516Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

19-51918148-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918148
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918148
    reference: chr 19
allele count: 15
allele frequency: 1.258452606674833e-4
allele num: 119194
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+287C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1371C>T
  hgvsp: ENST00000439889.2:c.1371C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1545C>T
  hgvsp: ENST00000339313.5:c.1545C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+287C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+287C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1545C>T
  hgvsp: ENST00000356298.5:c.1545C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+287C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+287C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1433C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.421G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+287C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13179
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 30543
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser515Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/19-51918157-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918157
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918157
    reference: chr 19
allele count: 2
allele frequency: 1.679204728640516e-5
allele num: 119104
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+278G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1536G>T
  hgvsp: ENST00000356298.5:c.1536G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1362G>T
  hgvsp: ENST00000439889.2:c.1362G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+278G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+278G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.430C>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1536G>T
  hgvsp: ENST00000339313.5:c.1536G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1424G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+278G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+278G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+278G>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30483
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly512Gly
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

19-51918164-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918164
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918164
    reference: chr 19
allele count: 1
allele frequency: 8.409580193756727e-6
allele num: 118912
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1529A>G
  hgvsp: ENSP00000348646.5:p.His510Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+271A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1529A>G
  hgvsp: ENSP00000345243.4:p.His510Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+271A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+271A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1417A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+271A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1355A>G
  hgvsp: ENSP00000389132.2:p.His452Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+271A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.437T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+271A>G
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30432
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1197
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His510Arg
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-51918185-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918185
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918185
    reference: chr 19
allele count: 2
allele frequency: 1.687906152417926e-5
allele num: 118490
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1334C>G
  hgvsp: ENSP00000389132.2:p.Ala445Gly
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1396C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+250C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.458G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+250C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+250C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1508C>G
  hgvsp: ENSP00000345243.4:p.Ala503Gly
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+250C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1508C>G
  hgvsp: ENSP00000348646.5:p.Ala503Gly
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+250C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+250C>G
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10048
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12834
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala503Gly
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-51918193-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918193
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918193
    reference: chr 19
allele count: 7
allele frequency: 5.915659596044959e-5
allele num: 118330
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1500G>T
  hgvsp: ENST00000356298.5:c.1500G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1326G>T
  hgvsp: ENST00000439889.2:c.1326G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+242G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+242G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.466C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+242G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+242G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1388G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+242G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1500G>T
  hgvsp: ENST00000339313.5:c.1500G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+242G>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12667
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8764
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly500Gly
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff

19-51918195-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918195
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918195
    reference: chr 19
allele count: 6
allele frequency: 5.072108475493262e-5
allele num: 118294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1386G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+240G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+240G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+240G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+240G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1324G>A
  hgvsp: ENSP00000389132.2:p.Gly442Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.468C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1498G>A
  hgvsp: ENSP00000345243.4:p.Gly500Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1498G>A
  hgvsp: ENSP00000348646.5:p.Gly500Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+240G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+240G>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly500Arg
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

19-51918196-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918196
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918196
    reference: chr 19
allele count: 7
allele frequency: 5.919561614179887e-5
allele num: 118252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+239C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1323C>T
  hgvsp: ENST00000439889.2:c.1323C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1497C>T
  hgvsp: ENST00000356298.5:c.1497C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+239C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1497C>T
  hgvsp: ENST00000339313.5:c.1497C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+239C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1385C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.469G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+239C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+239C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+239C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29843
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 10284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala499Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

19-51918199-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918199
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918199
    reference: chr 19
allele count: 2
allele frequency: 1.691160305085319e-5
allele num: 118262
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+236A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.472T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+236A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1382A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1320A>G
  hgvsp: ENST00000439889.2:c.1320A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+236A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+236A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+236A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1494A>G
  hgvsp: ENST00000339313.5:c.1494A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1494A>G
  hgvsp: ENST00000356298.5:c.1494A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+236A>G
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12522
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser498Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

19-51918202-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918202
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918202
    reference: chr 19
allele count: 52
allele frequency: 4.399993230779645e-4
allele num: 118182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+233C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+233C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1317C>T
  hgvsp: ENST00000439889.2:c.1317C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1491C>T
  hgvsp: ENST00000339313.5:c.1491C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1491C>T
  hgvsp: ENST00000356298.5:c.1491C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+233C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.475G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1379C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+233C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+233C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+233C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2811
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29707
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12488
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 10473
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser497Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

19-51918204-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918204
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918203
    reference: chr 19
allele count: 1
allele frequency: 8.464676903282601e-6
allele num: 118138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+230delC
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+230delC
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.482delG
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1488delC
  hgvsp: ENSP00000348646.5:p.Ser497AlafsTer11
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+230delC
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1314delC
  hgvsp: ENSP00000389132.2:p.Ser439AlafsTer11
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+230delC
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1488delC
  hgvsp: ENSP00000345243.4:p.Ser497AlafsTer11
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1376delC
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+230delC
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+230delC
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12447
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8681
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser497AlafsTer11
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: TG
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

19-51918205-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918205
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918205
    reference: chr 19
allele count: 2
allele frequency: 1.693824316541888e-5
allele num: 118076
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1488C>A
  hgvsp: ENST00000356298.5:c.1488C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1314C>A
  hgvsp: ENST00000439889.2:c.1314C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.478G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1376C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+230C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1488C>A
  hgvsp: ENST00000339313.5:c.1488C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+230C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+230C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+230C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+230C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+230C>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10497
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro496Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum

19-51918207-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918207
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918207
    reference: chr 19
allele count: 1
allele frequency: 8.480901010923401e-6
allele num: 117912
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.480G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1486C>T
  hgvsp: ENSP00000345243.4:p.Pro496Ser
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+228C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1312C>T
  hgvsp: ENSP00000389132.2:p.Pro438Ser
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+228C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+228C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+228C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+228C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1486C>T
  hgvsp: ENSP00000348646.5:p.Pro496Ser
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1374C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+228C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1288
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro496Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

19-51918208-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918208
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918208
    reference: chr 19
allele count: 1
allele frequency: 8.479462741240714e-6
allele num: 117932
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1373C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1311C>T
  hgvsp: ENST00000439889.2:c.1311C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+227C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.481G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+227C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+227C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1485C>T
  hgvsp: ENST00000356298.5:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+227C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+227C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+227C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1485C>T
  hgvsp: ENST00000339313.5:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38964
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr495Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

19-51918210-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918210
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918210
    reference: chr 19
allele count: 2
allele frequency: 1.696784593195894e-5
allele num: 117870
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+225A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+225A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+225A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1483A>G
  hgvsp: ENSP00000348646.5:p.Thr495Ala
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+225A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1483A>G
  hgvsp: ENSP00000345243.4:p.Thr495Ala
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+225A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1309A>G
  hgvsp: ENSP00000389132.2:p.Thr437Ala
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.483T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+225A>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1371A>G
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr495Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: T
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

19-51918216-C-CGTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918216
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918219
    reference: chr 19
allele count: 1
allele frequency: 8.512232077495362e-6
allele num: 117478
alternate allele: CGTG
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.490_491insTGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+218_1330+219insCAC
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+218_1156+219insCAC
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1364_1365insCAC
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+218_886+219insCAC
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1302_1303insCAC
  hgvsp: ENSP00000389132.2:p.Phe434_Glu435insHis
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1476_1477insCAC
  hgvsp: ENSP00000348646.5:p.Phe492_Glu493insHis
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1476_1477insCAC
  hgvsp: ENSP00000345243.4:p.Phe492_Glu493insHis
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+218_1060+219insCAC
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+218_1186+219insCAC
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+218_1081+219insCAC
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe492_Glu493insHis
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

19-51918216-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918216
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918216
    reference: chr 19
allele count: 66
allele frequency: 5.618073171146938e-4
allele num: 117478
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+219G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+219G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1477G>A
  hgvsp: ENSP00000348646.5:p.Glu493Lys
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1477G>A
  hgvsp: ENSP00000345243.4:p.Glu493Lys
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1365G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1303G>A
  hgvsp: ENSP00000389132.2:p.Glu435Lys
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+219G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+219G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+219G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+219G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.489C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10326
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 3.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29151
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12103
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu493Lys
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

19-51918217-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918217
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918217
    reference: chr 19
allele count: 6
allele frequency: 5.10673067102441e-5
allele num: 117492
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1364C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1302C>T
  hgvsp: ENST00000439889.2:c.1302C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+218C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1476C>T
  hgvsp: ENST00000339313.5:c.1476C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+218C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1476C>T
  hgvsp: ENST00000356298.5:c.1476C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254760
  ensembl transcript: ENST00000532473
  gene symbol: CTD-2616J11.3
  hgvsc: ENST00000532473.1:n.490G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+218C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+218C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+218C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+218C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12062
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Phe492Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

19-51918220-G-GCATGGCCCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918220
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918229
    reference: chr 19
allele count: 1
allele frequency: 8.530676312018017e-6
allele num: 117224
alternate allele: GCATGGCCCA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2552
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser491_Phe492insGlyProCys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

19-51918222-A-ACACTCACCAGGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918222
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918234
    reference: chr 19
allele count: 1
allele frequency: 8.551832657738554e-6
allele num: 116934
alternate allele: ACACTCACCAGGG
annotation: Annotation
  canonical: true
  consequence: stop_gained
  consequence: inframe_insertion
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: inframe_insertion
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: inframe_insertion
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: stop gained
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37626
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp490_Ser491insProTrpTerVal
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum

19-51918224-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918224
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918224
    reference: chr 19
allele count: 1
allele frequency: 8.579125272387228e-6
allele num: 116562
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+211A>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+211A>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1469A>C
  hgvsp: ENSP00000348646.5:p.Asp490Ala
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1295A>C
  hgvsp: ENSP00000389132.2:p.Asp432Ala
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1469A>C
  hgvsp: ENSP00000345243.4:p.Asp490Ala
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+211A>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+211A>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1357A>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+211A>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+211A>C
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11655
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2338
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp490Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

19-51918225-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918225
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918225
    reference: chr 19
allele count: 11
allele frequency: 9.437523593808984e-5
allele num: 116556
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+210G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+210G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1356G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1468G>C
  hgvsp: ENSP00000348646.5:p.Asp490His
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+210G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1468G>C
  hgvsp: ENSP00000345243.4:p.Asp490His
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1294G>C
  hgvsp: ENSP00000389132.2:p.Asp432His
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+210G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+210G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+210G>C
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9918
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2493
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp490His
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-51918227-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918227
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918227
    reference: chr 19
allele count: 1
allele frequency: 8.604074889867842e-6
allele num: 116224
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+208A>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1466A>T
  hgvsp: ENSP00000345243.4:p.Gln489Leu
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1354A>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1292A>T
  hgvsp: ENSP00000389132.2:p.Gln431Leu
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1466A>T
  hgvsp: ENSP00000348646.5:p.Gln489Leu
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+208A>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+208A>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+208A>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+208A>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+208A>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27806
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln489Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

19-51918229-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918229
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918229
    reference: chr 19
allele count: 1
allele frequency: 8.615342201392239e-6
allele num: 116072
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1464C>T
  hgvsp: ENST00000356298.5:c.1464C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+206C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+206C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+206C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+206C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1290C>T
  hgvsp: ENST00000439889.2:c.1290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+206C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1464C>T
  hgvsp: ENST00000339313.5:c.1464C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1352C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+206C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3769
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4793
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2453
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser488Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

19-51918229-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918229
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918229
    reference: chr 19
allele count: 1
allele frequency: 8.615342201392239e-6
allele num: 116072
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1290C>G
  hgvsp: ENSP00000389132.2:p.Ser430Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1464C>G
  hgvsp: ENSP00000348646.5:p.Ser488Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+206C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+206C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+206C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1352C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+206C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1464C>G
  hgvsp: ENSP00000345243.4:p.Ser488Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+206C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+206C>G
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27602
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3769
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser488Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-51918230-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918230
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918230
    reference: chr 19
allele count: 1
allele frequency: 8.632447644205037e-6
allele num: 115842
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1463G>T
  hgvsp: ENSP00000345243.4:p.Ser488Ile
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+205G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+205G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1351G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1289G>T
  hgvsp: ENSP00000389132.2:p.Ser430Ile
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+205G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1463G>T
  hgvsp: ENSP00000348646.5:p.Ser488Ile
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+205G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+205G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+205G>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11089
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5085
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 923
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser488Ile
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

19-51918238-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918238
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918238
    reference: chr 19
allele count: 1
allele frequency: 8.735150244584206e-6
allele num: 114480
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+197G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+197G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+197G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1455G>A
  hgvsp: ENST00000356298.5:c.1455G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1455G>A
  hgvsp: ENST00000339313.5:c.1455G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+197G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1281G>A
  hgvsp: ENST00000439889.2:c.1281G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1343G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+197G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+197G>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5934
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly485Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

19-51918239-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918239
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918239
    reference: chr 19
allele count: 1
allele frequency: 8.746610688358261e-6
allele num: 114330
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+196G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+196G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+196G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1454G>C
  hgvsp: ENSP00000348646.5:p.Gly485Ala
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1342G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+196G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1454G>C
  hgvsp: ENSP00000345243.4:p.Gly485Ala
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+196G>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1280G>C
  hgvsp: ENSP00000389132.2:p.Gly427Ala
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+196G>C
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24819
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7297
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6729
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly485Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-51918240-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918240
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918240
    reference: chr 19
allele count: 1
allele frequency: 8.773315084837957e-6
allele num: 113982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+195G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1341G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+195G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1453G>A
  hgvsp: ENSP00000345243.4:p.Gly485Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+195G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+195G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1453G>A
  hgvsp: ENSP00000348646.5:p.Gly485Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+195G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+195G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1279G>A
  hgvsp: ENSP00000389132.2:p.Gly427Arg
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6681
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly485Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

19-51918256-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918256
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918256
    reference: chr 19
allele count: 1
allele frequency: 9.019572472264815e-6
allele num: 110870
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1437G>A
  hgvsp: ENST00000356298.5:c.1437G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1437G>A
  hgvsp: ENST00000339313.5:c.1437G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+179G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1325G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+179G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+179G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+179G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1263G>A
  hgvsp: ENST00000439889.2:c.1263G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+179G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+179G>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9636
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4867
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20155
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5827
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly479Gly
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

19-51918257-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918257
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918257
    reference: chr 19
allele count: 1
allele frequency: 9.035056017347308e-6
allele num: 110680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+178G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1436G>A
  hgvsp: ENSP00000345243.4:p.Gly479Glu
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1436G>A
  hgvsp: ENSP00000348646.5:p.Gly479Glu
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+178G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1324G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+178G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1262G>A
  hgvsp: ENSP00000389132.2:p.Gly421Glu
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+178G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+178G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+178G>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19779
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2067
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5753
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly479Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-51918258-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918258
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918258
    reference: chr 19
allele count: 2
allele frequency: 1.811430124082963e-5
allele num: 110410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+177G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1323G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1435G>T
  hgvsp: ENSP00000345243.4:p.Gly479Trp
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+177G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+177G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1261G>T
  hgvsp: ENSP00000389132.2:p.Gly421Trp
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+177G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1435G>T
  hgvsp: ENSP00000348646.5:p.Gly479Trp
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+177G>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+177G>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9521
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7792
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly479Trp
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

19-51918261-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918261
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918261
    reference: chr 19
allele count: 1
allele frequency: 9.114773224442176e-6
allele num: 109712
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1320C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+174C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1432C>T
  hgvsp: ENSP00000348646.5:p.Leu478Phe
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+174C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1432C>T
  hgvsp: ENSP00000345243.4:p.Leu478Phe
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+174C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+174C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1258C>T
  hgvsp: ENSP00000389132.2:p.Leu420Phe
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+174C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+174C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8698
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3147
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu478Phe
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

19-51918269-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918269
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918269
    reference: chr 19
allele count: 1
allele frequency: 9.217779252622458e-6
allele num: 108486
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+166G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+166G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+166G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1250G>A
  hgvsp: ENSP00000389132.2:p.Arg417His
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+166G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1312G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1424G>A
  hgvsp: ENSP00000348646.5:p.Arg475His
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+166G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+166G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1424G>A
  hgvsp: ENSP00000345243.4:p.Arg475His
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8622
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11140
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9779
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg475His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

19-51918270-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918270
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918270
    reference: chr 19
allele count: 1
allele frequency: 9.26509283623022e-6
allele num: 107932
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+165C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+165C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1423C>A
  hgvsp: ENSP00000348646.5:p.Arg475Ser
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+165C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+165C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1423C>A
  hgvsp: ENSP00000345243.4:p.Arg475Ser
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1311C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+165C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+165C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1249C>A
  hgvsp: ENSP00000389132.2:p.Arg417Ser
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15027
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3725
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg475Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum

19-51918271-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918271
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918271
    reference: chr 19
allele count: 5
allele frequency: 4.622011869326481e-5
allele num: 108178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+164G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1422G>A
  hgvsp: ENST00000356298.5:c.1422G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+164G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+164G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+164G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1248G>A
  hgvsp: ENST00000439889.2:c.1248G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+164G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1310G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1422G>A
  hgvsp: ENST00000339313.5:c.1422G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+164G>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8779
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15056
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1456
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3778
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu474Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

19-51918275-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918275
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918275
    reference: chr 19
allele count: 1
allele frequency: 9.371719898035687e-6
allele num: 106704
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1244C>G
  hgvsp: ENSP00000389132.2:p.Ser415Cys
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1306C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+160C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+160C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1418C>G
  hgvsp: ENSP00000348646.5:p.Ser473Cys
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1418C>G
  hgvsp: ENSP00000345243.4:p.Ser473Cys
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+160C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+160C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+160C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+160C>G
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11760
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11187
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5792
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15266
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1461
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1825
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser473Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

19-51918276-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918276
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918276
    reference: chr 19
allele count: 1
allele frequency: 9.368910208364564e-6
allele num: 106736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+159T>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1417T>A
  hgvsp: ENSP00000345243.4:p.Ser473Thr
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1243T>A
  hgvsp: ENSP00000389132.2:p.Ser415Thr
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+159T>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1417T>A
  hgvsp: ENSP00000348646.5:p.Ser473Thr
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+159T>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1305T>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+159T>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+159T>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+159T>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4976
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11782
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12721
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10202
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser473Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

19-51918277-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918277
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918277
    reference: chr 19
allele count: 2
allele frequency: 1.877969539334072e-5
allele num: 106498
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1242C>G
  hgvsp: ENST00000439889.2:c.1242C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1416C>G
  hgvsp: ENST00000356298.5:c.1416C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+158C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+158C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+158C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1416C>G
  hgvsp: ENST00000339313.5:c.1416C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+158C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+158C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+158C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1304C>G
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11323
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5060
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11789
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10306
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5449
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro472Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

19-51918281-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918281
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918281
    reference: chr 19
allele count: 1
allele frequency: 9.535797383377198e-6
allele num: 104868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+154C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1238C>A
  hgvsp: ENSP00000389132.2:p.Ala413Asp
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+154C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+154C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1412C>A
  hgvsp: ENSP00000345243.4:p.Ala471Asp
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1412C>A
  hgvsp: ENSP00000348646.5:p.Ala471Asp
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1300C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+154C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+154C>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+154C>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11003
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12018
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5697
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2171
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala471Asp
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

19-51918283-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918283
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918283
    reference: chr 19
allele count: 2
allele frequency: 1.909417245856564e-5
allele num: 104744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1298G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1410G>A
  hgvsp: ENST00000339313.5:c.1410G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1410G>A
  hgvsp: ENST00000356298.5:c.1410G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+152G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+152G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+152G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+152G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+152G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1236G>A
  hgvsp: ENST00000439889.2:c.1236G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+152G>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11886
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5755
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11872
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11178
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10620
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro470Pro
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

19-51918288-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918288
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918288
    reference: chr 19
allele count: 1
allele frequency: 9.603933771272713e-6
allele num: 104124
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1405A>C
  hgvsp: ENSP00000348646.5:p.Ser469Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1405A>C
  hgvsp: ENSP00000345243.4:p.Ser469Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+147A>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1293A>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+147A>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+147A>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+147A>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1231A>C
  hgvsp: ENSP00000389132.2:p.Ser411Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+147A>C
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+147A>C
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12096
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11546
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10479
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4332
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5652
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser469Arg
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-51918290-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918290
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918290
    reference: chr 19
allele count: 1
allele frequency: 9.650460326957597e-6
allele num: 103622
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1403C>G
  hgvsp: ENSP00000345243.4:p.Ala468Gly
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+145C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+145C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1291C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1403C>G
  hgvsp: ENSP00000348646.5:p.Ala468Gly
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1229C>G
  hgvsp: ENSP00000389132.2:p.Ala410Gly
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+145C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+145C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+145C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+145C>G
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11415
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6504
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4307
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11611
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala468Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

19-51918292-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918292
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918292
    reference: chr 19
allele count: 2
allele frequency: 1.939788950962135e-5
allele num: 103104
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1289G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+143G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1401G>A
  hgvsp: ENST00000356298.5:c.1401G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+143G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1401G>A
  hgvsp: ENST00000339313.5:c.1401G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+143G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+143G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1227G>A
  hgvsp: ENST00000439889.2:c.1227G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+143G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+143G>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11387
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6733
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1435
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2225
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln467Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

19-51918301-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918301
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918301
    reference: chr 19
allele count: 2
allele frequency: 1.952133682114551e-5
allele num: 102452
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+134C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+134C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1280C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1392C>T
  hgvsp: ENST00000356298.5:c.1392C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1392C>T
  hgvsp: ENST00000339313.5:c.1392C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+134C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1218C>T
  hgvsp: ENST00000439889.2:c.1218C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+134C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+134C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+134C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13185
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3646
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1448
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Cys464Cys
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ

19-51918307-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918307
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918307
    reference: chr 19
allele count: 1
allele frequency: 9.796622124691406e-6
allele num: 102076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1386C>T
  hgvsp: ENST00000339313.5:c.1386C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1386C>T
  hgvsp: ENST00000356298.5:c.1386C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1212C>T
  hgvsp: ENST00000439889.2:c.1212C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+128C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+128C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1274C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+128C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+128C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+128C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+128C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11883
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8715
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15061
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3894
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys462Cys
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

19-51918308-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918308
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918308
    reference: chr 19
allele count: 2
allele frequency: 1.964404981731034e-5
allele num: 101812
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+127G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1385G>A
  hgvsp: ENSP00000348646.5:p.Cys462Tyr
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1385G>A
  hgvsp: ENSP00000345243.4:p.Cys462Tyr
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+127G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+127G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1211G>A
  hgvsp: ENSP00000389132.2:p.Cys404Tyr
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+127G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+127G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1273G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+127G>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11821
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8802
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys462Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-51918310-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918310
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918310
    reference: chr 19
allele count: 2
allele frequency: 1.960861210243539e-5
allele num: 101996
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+125C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+125C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1383C>G
  hgvsp: ENSP00000345243.4:p.His461Gln
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+125C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1271C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1383C>G
  hgvsp: ENSP00000348646.5:p.His461Gln
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1209C>G
  hgvsp: ENSP00000389132.2:p.His403Gln
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+125C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+125C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+125C>G
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15883
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8048
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3284
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His461Gln
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

19-51918338-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918338
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918338
    reference: chr 19
allele count: 1
allele frequency: 9.607993850883936e-6
allele num: 104080
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+97C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+97C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+97C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+97C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1181C>T
  hgvsp: ENSP00000389132.2:p.Ser394Phe
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1243C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1355C>T
  hgvsp: ENSP00000345243.4:p.Ser452Phe
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1355C>T
  hgvsp: ENSP00000348646.5:p.Ser452Phe
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+97C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+97C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7017
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6052
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1759
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser452Phe
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD

19-51918340-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918340
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918340
    reference: chr 19
allele count: 1
allele frequency: 9.571209800918836e-6
allele num: 104480
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+95C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1179C>T
  hgvsp: ENST00000439889.2:c.1179C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+95C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+95C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1353C>T
  hgvsp: ENST00000356298.5:c.1353C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1353C>T
  hgvsp: ENST00000339313.5:c.1353C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+95C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1241C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+95C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+95C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6888
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5725
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8996
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro451Pro
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

19-51918344-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918344
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918344
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 104920
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1175G>A
  hgvsp: ENSP00000389132.2:p.Gly392Asp
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+91G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1349G>A
  hgvsp: ENSP00000348646.5:p.Gly450Asp
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+91G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+91G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1237G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+91G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1349G>A
  hgvsp: ENSP00000345243.4:p.Gly450Asp
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+91G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+91G>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6670
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1562
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gly450Asp
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

19-51918349-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918349
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918349
    reference: chr 19
allele count: 3
allele frequency: 2.831951970094587e-5
allele num: 105934
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1170G>A
  hgvsp: ENST00000439889.2:c.1170G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+86G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+86G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+86G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1344G>A
  hgvsp: ENST00000356298.5:c.1344G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+86G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+86G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1344G>A
  hgvsp: ENST00000339313.5:c.1344G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1232G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+86G>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6097
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12657
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25307
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1403
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2832
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu448Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

19-51918355-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918355
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918355
    reference: chr 19
allele count: 4
allele frequency: 3.739645855537481e-5
allele num: 106962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+80G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1338G>A
  hgvsp: ENST00000356298.5:c.1338G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+80G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1338G>A
  hgvsp: ENST00000339313.5:c.1338G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1226G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1164G>A
  hgvsp: ENST00000439889.2:c.1164G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+80G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+80G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+80G>A
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+80G>A
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25613
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6258
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro446Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP

19-51918356-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918356
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918356
    reference: chr 19
allele count: 3
allele frequency: 2.789815314226198e-5
allele num: 107534
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1163C>T
  hgvsp: ENSP00000389132.2:p.Pro388Leu
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+79C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+79C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+79C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+79C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1225C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1337C>T
  hgvsp: ENSP00000348646.5:p.Pro446Leu
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1337C>T
  hgvsp: ENSP00000345243.4:p.Pro446Leu
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+79C>T
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+79C>T
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6669
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3270
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5983
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro446Leu
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

19-51918356-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918356
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918356
    reference: chr 19
allele count: 1
allele frequency: 9.299384380753994e-6
allele num: 107534
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000342389
  ensembl transcript: ENST00000353836
  gene symbol: SIGLEC10
  hgvsc: ENST00000353836.5:c.1330+79C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142512
  ensembl transcript: ENST00000357375
  gene symbol: SIGLEC10
  hgvsc: ENST00000357375.4:n.1225C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000345243
  ensembl transcript: ENST00000339313
  gene symbol: SIGLEC10
  hgvsc: ENST00000339313.5:c.1337C>G
  hgvsp: ENSP00000345243.4:p.Pro446Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000431444
  ensembl transcript: ENST00000525998
  gene symbol: SIGLEC10
  hgvsc: ENST00000525998.1:c.1060+79C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000414324
  ensembl transcript: ENST00000436984
  gene symbol: SIGLEC10
  hgvsc: ENST00000436984.2:c.1186+79C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000389132
  ensembl transcript: ENST00000439889
  gene symbol: SIGLEC10
  hgvsc: ENST00000439889.2:c.1163C>G
  hgvsp: ENSP00000389132.2:p.Pro388Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000408387
  ensembl transcript: ENST00000441969
  gene symbol: SIGLEC10
  hgvsc: ENST00000441969.3:c.1156+79C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000348646
  ensembl transcript: ENST00000356298
  gene symbol: SIGLEC10
  hgvsc: ENST00000356298.5:c.1337C>G
  hgvsp: ENSP00000348646.5:p.Pro446Arg
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000396742
  ensembl transcript: ENST00000432469
  gene symbol: SIGLEC10
  hgvsc: ENST00000432469.2:c.1081+79C>G
  variant of: http://identifiers.org/hgnc/15620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142512
  ensembl protein: ENSP00000395475
  ensembl transcript: ENST00000442846
  gene symbol: SIGLEC10
  hgvsc: ENST00000442846.3:c.886+79C>G
  variant of: http://identifiers.org/hgnc/15620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6669
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5983
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro446Arg
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP

19-51918360-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51918360
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51918360
allele count: 19707
allele frequency: 1.792425372455569e-1
allele num: 109946
alternate allele: G
canonical: true
consequence: missense
filter: PASS
hgvs: p.Ser445Pro
num of homozygotes: 1941
reference allele: A

GenotypeQuality
all individuals: 118
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27455
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1039
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2037
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1264
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18496
bin: 9.75e1
variant carriers: 112

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6490
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2051
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.05999576001696e-4
allele num: 9434
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.193905817174516e-4
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.128668171557562e-3
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 87
allele frequency: 1.338049830821286e-3
allele num: 65020
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 9.085402786190188e-4
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.127e0

QD
type: SiteQuality
SIO_000300: 1.536e1

FS
type: SiteQuality
SIO_000300: 1.162e0

VQSLOD
type: SiteQuality
SIO_000300: 3.39e-1

DP
type: SiteQuality
SIO_000300: 3.510305e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQ
type: SiteQuality
SIO_000300: 5.774e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1261
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6488
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27448
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2053
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2038
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1039
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.075882009166129e-5
allele num: 65022
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.779e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.836e-1

FS
type: SiteQuality
SIO_000300: 1.93e0

DP
type: SiteQuality
SIO_000300: 3.509194e6

QD
type: SiteQuality
SIO_000300: 1.669e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.428e0

GenotypeQuality
all individuals: 1248
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18484
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6486
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27430
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2058
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2041
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65046
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162250116225012e-4
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.851e1

FS
type: SiteQuality
SIO_000300: 3.62e0

DP
type: SiteQuality
SIO_000300: 3.509592e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

QD
type: SiteQuality
SIO_000300: 1.386e1

VQSLOD
type: SiteQuality
SIO_000300: -7.645999999999999e-1

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.25e1
variant carriers: 15

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 15

GenotypeQuality
all individuals: 95
bin: 2.75e1
variant carriers: 8

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 22

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 7

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 17

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 18

GenotypeQuality
all individuals: 116
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 28

GenotypeQuality
all individuals: 986
bin: 8.25e1
variant carriers: 24

GenotypeQuality
all individuals: 20001
bin: 9.75e1
variant carriers: 18972

GenotypeQuality
all individuals: 839
bin: 2.25e1
variant carriers: 17

GenotypeQuality
all individuals: 471
bin: 9.25e1
variant carriers: 20

GenotypeQuality
all individuals: 1957
bin: 7.75e1
variant carriers: 23

GenotypeQuality
all individuals: 1992
bin: 7.25e1
variant carriers: 13

GenotypeQuality
all individuals: 27011
bin: 6.25e1
variant carriers: 21

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 11

GenotypeQuality
all individuals: 438
bin: 8.75e1
variant carriers: 16

African
type: Population
allele count: 3609
allele frequency: 3.664703493095045e-1
allele num: 9848
num of homozygotes: 654

European (Finnish)
type: Population
allele count: 1005
allele frequency: 1.519504082249773e-1
allele num: 6614
num of homozygotes: 66

South Asian
type: Population
allele count: 3533
allele frequency: 2.139656007751938e-1
allele num: 16512
num of homozygotes: 381

Other
type: Population
allele count: 143
allele frequency: 1.599552572706935e-1
allele num: 894
num of homozygotes: 11

European (Non-Finnish)
type: Population
allele count: 9783
allele frequency: 1.498116443600502e-1
allele num: 65302
num of homozygotes: 737

East Asian
type: Population
allele count: 1585
allele frequency: 1.841310408921933e-1
allele num: 8608
num of homozygotes: 162

Latino
type: Population
allele count: 1620
allele frequency: 1.401869158878505e-1
allele num: 11556
num of homozygotes: 130

MQ
type: SiteQuality
SIO_000300: 5.697e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

QD
type: SiteQuality
SIO_000300: 1.577e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.68e-1

DP
type: SiteQuality
SIO_000300: 3.904768e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.15e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.91e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2039
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2019
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27230
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6438
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18824
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 493
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531862745098039e-5
allele num: 65280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.58e-1

MQ
type: SiteQuality
SIO_000300: 5.824e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.62e-1

FS
type: SiteQuality
SIO_000300: 6.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.92e-1

DP
type: SiteQuality
SIO_000300: 3.339365e6

QD
type: SiteQuality
SIO_000300: 1.431e1

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6438
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27230
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18824
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 162
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1000
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2019
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2039
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531862745098039e-5
allele num: 65280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.72e-1

FS
type: SiteQuality
SIO_000300: 6.04e-1

DP
type: SiteQuality
SIO_000300: 3.339365e6

MQ
type: SiteQuality
SIO_000300: 5.824e1

QD
type: SiteQuality
SIO_000300: 1.431e1

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6439
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2036
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18823
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1069
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530643482520051e-5
allele num: 65332
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

DP
type: SiteQuality
SIO_000300: 3.33984e6

FS
type: SiteQuality
SIO_000300: 1.101e0

VQSLOD
type: SiteQuality
SIO_000300: -4.905e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.1e-1

QD
type: SiteQuality
SIO_000300: 1.289e1

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

MQ
type: SiteQuality
SIO_000300: 5.642e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

GenotypeQuality
all individuals: 1032
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2036
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27327
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6439
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1069
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18823
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.101e0

VQSLOD
type: SiteQuality
SIO_000300: -4.905e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

QD
type: SiteQuality
SIO_000300: 1.289e1

DP
type: SiteQuality
SIO_000300: 3.33984e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.1e-1

MQ
type: SiteQuality
SIO_000300: 5.642e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

GenotypeQuality
all individuals: 220
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6435
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2012
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27272
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1022
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18820
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1071
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530128224745234e-5
allele num: 65354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.242e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.37e-1

MQ
type: SiteQuality
SIO_000300: 5.855e1

QD
type: SiteQuality
SIO_000300: 1.659e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.29e-1

FS
type: SiteQuality
SIO_000300: 5.928e0

DP
type: SiteQuality
SIO_000300: 3.339257e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27309
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6439
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1070
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18819
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2013
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9918
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529940944279551e-5
allele num: 65362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.437e-1

FS
type: SiteQuality
SIO_000300: 2.157e0

QD
type: SiteQuality
SIO_000300: 1.244e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.82e-1

DP
type: SiteQuality
SIO_000300: 3.339303e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.366e0

MQ
type: SiteQuality
SIO_000300: 5.867e1

GenotypeQuality
all individuals: 133
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2033
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27166
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6430
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1068
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18818
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 491
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2010
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65334
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9918
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.52e-1

MQ
type: SiteQuality
SIO_000300: 5.749e1

FS
type: SiteQuality
SIO_000300: 8.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.17e0

DP
type: SiteQuality
SIO_000300: 3.338316e6

QD
type: SiteQuality
SIO_000300: 8.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.38e-1

GenotypeQuality
all individuals: 136
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19979
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 440
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1948
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
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GenotypeQuality
all individuals: 832
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
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variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 991
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26976
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1991
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6324
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65394
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9998
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e-1

DP
type: SiteQuality
SIO_000300: 3.324307e6

MQ
type: SiteQuality
SIO_000300: 5.578e1

FS
type: SiteQuality
SIO_000300: 6.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.36e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-2

QD
type: SiteQuality
SIO_000300: 1.658e1

GenotypeQuality
all individuals: 991
bin: 8.25e1
variant carriers: 27

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 11

GenotypeQuality
all individuals: 832
bin: 2.25e1
variant carriers: 11

GenotypeQuality
all individuals: 19979
bin: 9.75e1
variant carriers: 18970

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 28

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 24

GenotypeQuality
all individuals: 99
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 16

GenotypeQuality
all individuals: 440
bin: 8.75e1
variant carriers: 19

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 11

GenotypeQuality
all individuals: 1991
bin: 7.25e1
variant carriers: 16

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 9

GenotypeQuality
all individuals: 136
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 6324
bin: 6.75e1
variant carriers: 15

GenotypeQuality
all individuals: 468
bin: 9.25e1
variant carriers: 19

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 19

GenotypeQuality
all individuals: 26976
bin: 6.25e1
variant carriers: 18

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 4

European (Finnish)
type: Population
allele count: 1005
allele frequency: 1.522265980006059e-1
allele num: 6602
num of homozygotes: 66

African
type: Population
allele count: 3640
allele frequency: 3.640728145629126e-1
allele num: 9998
num of homozygotes: 656

European (Non-Finnish)
type: Population
allele count: 9778
allele frequency: 1.495244212007218e-1
allele num: 65394
num of homozygotes: 739

Other
type: Population
allele count: 143
allele frequency: 1.595982142857143e-1
allele num: 896
num of homozygotes: 11

East Asian
type: Population
allele count: 1581
allele frequency: 1.839227547696603e-1
allele num: 8596
num of homozygotes: 160

Latino
type: Population
allele count: 1620
allele frequency: 1.402597402597403e-1
allele num: 11550
num of homozygotes: 130

South Asian
type: Population
allele count: 3529
allele frequency: 2.137233527131783e-1
allele num: 16512
num of homozygotes: 381

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.36e-2

FS
type: SiteQuality
SIO_000300: 6.22e-1

MQ
type: SiteQuality
SIO_000300: 5.578e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.38e-1

DP
type: SiteQuality
SIO_000300: 3.324307e6

QD
type: SiteQuality
SIO_000300: 1.658e1

VQSLOD
type: SiteQuality
SIO_000300: 3.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e-1

GenotypeQuality
all individuals: 1212
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.021835826930853e-4
allele num: 9892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.699693e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.065e0

ClippingRankSum
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SIO_000300: -3.19e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.31e-1

MQ
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SIO_000300: 5.148e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.394e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 16

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65156
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 1.413855786709756e-3
allele num: 9902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

DP
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SIO_000300: 1.699541e6

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

FS
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.437e1

QD
type: SiteQuality
SIO_000300: 1.433e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.580000000000001e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211680600993578e-4
allele num: 16506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.66e-1

DP
type: SiteQuality
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ClippingRankSum
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SIO_000300: -3.06e-1

QD
type: SiteQuality
SIO_000300: 1.445e1

MQRankSum
type: SiteQuality
SIO_000300: 9.67e-1

BaseQRankSum
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SIO_000300: -3.757e0

VQSLOD
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SIO_000300: -1.383e0

InbreedingCoeff
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQ
type: SiteQuality
SIO_000300: 5.065e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.01461038961039e-4
allele num: 9856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64978
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

DP
type: SiteQuality
SIO_000300: 1.692359e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

FS
type: SiteQuality
SIO_000300: 6.8e-1

MQ
type: SiteQuality
SIO_000300: 5.275e1

VQSLOD
type: SiteQuality
SIO_000300: -1.254e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.91e-1

QD
type: SiteQuality
SIO_000300: 1.184e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.77e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64732
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213444970270598e-4
allele num: 16482
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.628e0

VQSLOD
type: SiteQuality
SIO_000300: -1.492e0

ReadPosRankSum
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SIO_000300: -7.59e-1

QD
type: SiteQuality
SIO_000300: 1.552e1

DP
type: SiteQuality
SIO_000300: 1.682505e6

MQ
type: SiteQuality
SIO_000300: 5.169e1

InbreedingCoeff
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SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.43e0

BaseQRankSum
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SIO_000300: -4.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.53e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.10394140216254e-4
allele num: 11468
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.93e-1

VQSLOD
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SIO_000300: -7.922e-1

MQ
type: SiteQuality
SIO_000300: 5.179e1

BaseQRankSum
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SIO_000300: -3.425e0

MQRankSum
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.675883e6

FS
type: SiteQuality
SIO_000300: 1.033e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.03210729526519e-4
allele num: 9842
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.821272462360369e-4
allele num: 16472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169864295741694e-4
allele num: 8548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.76e-1

MQ
type: SiteQuality
SIO_000300: 5.27e1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
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MQRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: -4.0e-4

BaseQRankSum
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SIO_000300: 2.95e0

DP
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SIO_000300: 1.675355e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 39019
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variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214771622934888e-4
allele num: 16464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.736584762022653e-5
allele num: 64628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9832
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -7.0e-4

DP
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SIO_000300: 1.67332e6

ReadPosRankSum
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SIO_000300: 3.65e-1

BaseQRankSum
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SIO_000300: 1.48e0

VQSLOD
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SIO_000300: -1.289e0

MQRankSum
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SIO_000300: 6.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.38e-1

MQ
type: SiteQuality
SIO_000300: 5.022e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
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allele count: 2
allele frequency: 3.094442381482857e-5
allele num: 64632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9842
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East Asian
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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DP
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MQRankSum
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BaseQRankSum
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SIO_000300: -2.462e0

VQSLOD
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.074596039363382e-5
allele num: 16462
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.747640685075148e-4
allele num: 11444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64598
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African
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allele count: 49
allele frequency: 4.979674796747968e-3
allele num: 9840
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InbreedingCoeff
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SIO_000300: 2.0e-4

FS
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SIO_000300: 0.0e0

ReadPosRankSum
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DP
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VQSLOD
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MQ
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SIO_000300: 5.058e1

MQRankSum
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.548227279764669e-5
allele num: 64590
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9836
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.44e0

MQRankSum
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SIO_000300: -7.92e-1

QD
type: SiteQuality
SIO_000300: 1.119e1

DP
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MQ
type: SiteQuality
SIO_000300: 5.421e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64558
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9830
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.215214485356665e-4
allele num: 16458
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.79e-1

FS
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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QD
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InbreedingCoeff
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SIO_000300: -9.0e-4

DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 876
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 1.018537380321858e-4
allele num: 9818
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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QD
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FS
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DP
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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Other
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South Asian
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African
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East Asian
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European (Non-Finnish)
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allele count: 1
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allele num: 64490
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FS
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MQ
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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QD
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InbreedingCoeff
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

East Asian
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Other
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European (Finnish)
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Latino
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South Asian
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African
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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DP
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FS
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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allele frequency: 1.022285831118381e-4
allele num: 9782
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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FS
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QD
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InbreedingCoeff
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DP
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele num: 64254
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 5.71780436312456e-3
allele num: 11368
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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DP
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BaseQRankSum
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QD
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MQ
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.555790652809758e-5
allele num: 64276
num of homozygotes: 0

Other
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allele count: 0
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African
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allele count: 5
allele frequency: 5.111429155591903e-4
allele num: 9782
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East Asian
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Latino
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allele frequency: 0.0e0
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQ
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MQRankSum
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VQSLOD
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FS
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DP
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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South Asian
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num of homozygotes: 0

Latino
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East Asian
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allele frequency: 0.0e0
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African
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Other
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FS
type: SiteQuality
SIO_000300: 1.6143e1

MQRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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DP
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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allele num: 9728
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Latino
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South Asian
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European (Non-Finnish)
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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FS
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QD
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ClippingRankSum
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VQSLOD
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DP
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MQ
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BaseQRankSum
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SIO_000300: 6.6e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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African
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Other
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South Asian
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FS
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MQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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European (Finnish)
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South Asian
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African
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Other
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European (Non-Finnish)
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VQSLOD
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ClippingRankSum
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MQ
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BaseQRankSum
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FS
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InbreedingCoeff
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DP
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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African
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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FS
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QD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11200
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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MQ
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InbreedingCoeff
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QD
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ClippingRankSum
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ReadPosRankSum
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FS
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BaseQRankSum
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VQSLOD
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 1.035840066293764e-4
allele num: 9654
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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ReadPosRankSum
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SIO_000300: 1.74e0

DP
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FS
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MQRankSum
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MQ
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QD
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele num: 16358
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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FS
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ClippingRankSum
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VQSLOD
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 62566
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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MQRankSum
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QD
type: SiteQuality
SIO_000300: 2.711e1

FS
type: SiteQuality
SIO_000300: 8.016999999999999e0

ReadPosRankSum
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BaseQRankSum
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DP
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MQ
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VQSLOD
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SIO_000300: -2.419e0

ClippingRankSum
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SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 62476
num of homozygotes: 0

European (Finnish)
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Other
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Latino
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allele frequency: 0.0e0
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African
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South Asian
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East Asian
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DP
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VQSLOD
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InbreedingCoeff
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FS
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MQRankSum
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QD
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MQ
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 62246
num of homozygotes: 0

European (Finnish)
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South Asian
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Other
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African
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East Asian
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Latino
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ClippingRankSum
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FS
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QD
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InbreedingCoeff
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DP
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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European (Non-Finnish)
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African
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South Asian
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Latino
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East Asian
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InbreedingCoeff
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QD
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VQSLOD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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African
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Other
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South Asian
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MQ
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InbreedingCoeff
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FS
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VQSLOD
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ReadPosRankSum
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DP
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BaseQRankSum
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QD
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16152
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.323142363418849e-5
allele num: 60184
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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East Asian
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

MQ
type: SiteQuality
SIO_000300: 5.291e1

MQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.75e-1

DP
type: SiteQuality
SIO_000300: 1.386523e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8004
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.208866261020738e-5
allele num: 16106
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 59824
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Other
type: Population
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MQRankSum
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InbreedingCoeff
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DP
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FS
type: SiteQuality
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.21e-1

MQ
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SIO_000300: 5.079e1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 59104
num of homozygotes: 0

African
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allele frequency: 1.190759704691593e-4
allele num: 8398
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 4.828e1

InbreedingCoeff
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SIO_000300: -4.1e-3

VQSLOD
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FS
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QD
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 58854
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.29009938357026e-5
allele num: 15898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5764
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
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Latino
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: -1.309e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.87e-1

BaseQRankSum
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SIO_000300: 2.95e-1

MQ
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SIO_000300: 4.929e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

DP
type: SiteQuality
SIO_000300: 1.288111e6

FS
type: SiteQuality
SIO_000300: 4.579e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 7878
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 8.482051978014521e-5
allele num: 58948
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South Asian
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 4.707e1

ReadPosRankSum
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SIO_000300: 1.01e0

QD
type: SiteQuality
SIO_000300: 1.385e1

FS
type: SiteQuality
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VQSLOD
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DP
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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num of homozygotes: 0

East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele num: 10364
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BaseQRankSum
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InbreedingCoeff
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FS
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MQRankSum
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QD
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MQ
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele num: 7792
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Latino
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Other
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South Asian
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FS
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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QD
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ReadPosRankSum
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MQ
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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African
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European (Finnish)
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South Asian
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Other
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European (Non-Finnish)
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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MQRankSum
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DP
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FS
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BaseQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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African
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East Asian
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European (Non-Finnish)
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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MQ
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FS
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InbreedingCoeff
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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Latino
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African
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South Asian
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VQSLOD
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MQ
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QD
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ReadPosRankSum
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MQRankSum
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DP
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FS
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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QD
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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MQ
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FS
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MQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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African
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Other
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DP
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ReadPosRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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FS
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MQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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South Asian
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Other
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Latino
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European (Non-Finnish)
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ClippingRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQRankSum
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QD
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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East Asian
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South Asian
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European (Finnish)
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ReadPosRankSum
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BaseQRankSum
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DP
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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QD
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Other
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African
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European (Finnish)
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Latino
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European (Non-Finnish)
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InbreedingCoeff
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DP
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FS
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQ
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BaseQRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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South Asian
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European (Finnish)
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East Asian
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Latino
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Other
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MQ
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VQSLOD
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BaseQRankSum
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QD
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ReadPosRankSum
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FS
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DP
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12498
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1615
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.848335631278314e-5
allele num: 10154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7984
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.768346595932803e-5
allele num: 56550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5778
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.65e-1

FS
type: SiteQuality
SIO_000300: 6.349e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.7e-2

QD
type: SiteQuality
SIO_000300: 1.357e1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

VQSLOD
type: SiteQuality
SIO_000300: -2.357e0

MQ
type: SiteQuality
SIO_000300: 4.581e1

DP
type: SiteQuality
SIO_000300: 1.181231e6

GenotypeQuality
all individuals: 1493
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10694
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.311170212765957e-5
allele num: 12032
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.310341e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.186e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 4.215e1

VQSLOD
type: SiteQuality
SIO_000300: -2.383e0

QD
type: SiteQuality
SIO_000300: 6.51e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6168
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.311170212765957e-5
allele num: 12032
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10756
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.482e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e-1

QD
type: SiteQuality
SIO_000300: 1.691e1

MQRankSum
type: SiteQuality
SIO_000300: 1.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.166e0

DP
type: SiteQuality
SIO_000300: 1.320371e6

FS
type: SiteQuality
SIO_000300: 3.174e0

VQSLOD
type: SiteQuality
SIO_000300: -1.384e0

GenotypeQuality
all individuals: 1395
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1830
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variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7934
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6216
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10820
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

MQ
type: SiteQuality
SIO_000300: 5.763e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.565e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.337607e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.22e-1

QD
type: SiteQuality
SIO_000300: 4.82e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10954
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.728560775540641e-4
allele num: 8046
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

QD
type: SiteQuality
SIO_000300: 1.103e1

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQ
type: SiteQuality
SIO_000300: 5.371e1

DP
type: SiteQuality
SIO_000300: 1.36363e6

FS
type: SiteQuality
SIO_000300: 1.117e0

VQSLOD
type: SiteQuality
SIO_000300: -1.117e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.768853034023149e-5
allele num: 11404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11084
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8180
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.967380865648906e-5
allele num: 60394
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

QD
type: SiteQuality
SIO_000300: 1.199e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.11e-1

MQ
type: SiteQuality
SIO_000300: 5.829e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.911e-1

FS
type: SiteQuality
SIO_000300: 7.256e0

MQRankSum
type: SiteQuality
SIO_000300: 4.69e-1

DP
type: SiteQuality
SIO_000300: 1.391166e6

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 798
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8236
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.634814684700509e-4
allele num: 11386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60736
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.871e1

DP
type: SiteQuality
SIO_000300: 1.402595e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.05e0

FS
type: SiteQuality
SIO_000300: 7.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

QD
type: SiteQuality
SIO_000300: 1.403e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11106
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.646469968387776e-5
allele num: 60736
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

MQ
type: SiteQuality
SIO_000300: 5.871e1

VQSLOD
type: SiteQuality
SIO_000300: -1.038e-1

QD
type: SiteQuality
SIO_000300: 1.403e1

DP
type: SiteQuality
SIO_000300: 1.402595e6