17-7535277-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535277
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535277
    reference: chr 17
allele count: 2
allele frequency: 1.651200422707308e-5
allele num: 121124
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+211C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.424C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.622C>G
  hgvsp: ENSP00000458559.1:p.Leu208Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.622C>G
  hgvsp: ENSP00000458181.1:p.Leu208Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.796C>G
  hgvsp: ENSP00000369816.4:p.Leu266Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.460C>G
  hgvsp: ENSP00000459620.1:p.Leu154Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1090C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.553C>G
  hgvsp: ENSP00000458858.1:p.Leu185Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.460C>G
  hgvsp: ENSP00000459999.1:p.Leu154Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.622C>G
  hgvsp: ENSP00000345675.5:p.Leu208Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+211C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.796C>G
  hgvsp: ENSP00000388867.3:p.Leu266Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.742C>G
  hgvsp: ENSP00000458973.1:p.Leu248Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+211C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+211C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1090C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*158C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+211C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*754C>G
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu266Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

17-7535289-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535289
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535289
    reference: chr 17
allele count: 1
allele frequency: 8.263779852904718e-6
allele num: 121010
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.634A>G
  hgvsp: ENSP00000345675.5:p.Thr212Ala
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1102A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.565A>G
  hgvsp: ENSP00000458858.1:p.Thr189Ala
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.634A>G
  hgvsp: ENSP00000458559.1:p.Thr212Ala
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.808A>G
  hgvsp: ENSP00000388867.3:p.Thr270Ala
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.436A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+223A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.634A>G
  hgvsp: ENSP00000458181.1:p.Thr212Ala
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.472A>G
  hgvsp: ENSP00000459999.1:p.Thr158Ala
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.472A>G
  hgvsp: ENSP00000459620.1:p.Thr158Ala
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+223A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.754A>G
  hgvsp: ENSP00000458973.1:p.Thr252Ala
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*170A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+223A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.808A>G
  hgvsp: ENSP00000369816.4:p.Thr270Ala
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1102A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+223A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*766A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+223A>G
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr270Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

17-7535295-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535295
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535295
    reference: chr 17
allele count: 1
allele frequency: 8.267469162340024e-6
allele num: 120956
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*176G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+229G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.814G>A
  hgvsp: ENSP00000388867.3:p.Glu272Lys
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.640G>A
  hgvsp: ENSP00000458181.1:p.Glu214Lys
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1108G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.478G>A
  hgvsp: ENSP00000459999.1:p.Glu160Lys
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1108G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.442G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.478G>A
  hgvsp: ENSP00000459620.1:p.Glu160Lys
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+229G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+229G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.640G>A
  hgvsp: ENSP00000345675.5:p.Glu214Lys
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*772G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.814G>A
  hgvsp: ENSP00000369816.4:p.Glu272Lys
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.640G>A
  hgvsp: ENSP00000458559.1:p.Glu214Lys
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.760G>A
  hgvsp: ENSP00000458973.1:p.Glu254Lys
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+229G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+229G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.571G>A
  hgvsp: ENSP00000458858.1:p.Glu191Lys
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu272Lys
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-7535295-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535295
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535295
    reference: chr 17
allele count: 1
allele frequency: 8.267469162340024e-6
allele num: 120956
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.814G>C
  hgvsp: ENSP00000388867.3:p.Glu272Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.478G>C
  hgvsp: ENSP00000459999.1:p.Glu160Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.478G>C
  hgvsp: ENSP00000459620.1:p.Glu160Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.640G>C
  hgvsp: ENSP00000458181.1:p.Glu214Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*176G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+229G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+229G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+229G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1108G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+229G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1108G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.640G>C
  hgvsp: ENSP00000345675.5:p.Glu214Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.571G>C
  hgvsp: ENSP00000458858.1:p.Glu191Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.760G>C
  hgvsp: ENSP00000458973.1:p.Glu254Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.640G>C
  hgvsp: ENSP00000458559.1:p.Glu214Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+229G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.814G>C
  hgvsp: ENSP00000369816.4:p.Glu272Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*772G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.442G>C
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu272Gln
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

17-7535306-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535306
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535306
    reference: chr 17
allele count: 1
allele frequency: 8.276638360563474e-6
allele num: 120822
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1119T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+240T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+240T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.651T>C
  hgvsp: ENST00000574539.1:c.651T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*783T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.825T>C
  hgvsp: ENST00000380450.4:c.825T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.582T>C
  hgvsp: ENST00000571153.1:c.582T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.825T>C
  hgvsp: ENST00000416273.3:c.825T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*187T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.489T>C
  hgvsp: ENST00000576728.1:c.489T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.651T>C
  hgvsp: ENST00000340624.5:c.651T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.489T>C
  hgvsp: ENST00000572262.1:c.489T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+240T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.771T>C
  hgvsp: ENST00000575903.1:c.771T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.453T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+240T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+240T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.651T>C
  hgvsp: ENST00000575314.1:c.651T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1119T>C
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16710
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser275Ser
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/17-7535310-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535310
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535310
    reference: chr 17
allele count: 3
allele frequency: 2.484801298722812e-5
allele num: 120734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+244C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1123C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.457C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*787C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.775C>A
  hgvsp: ENSP00000458973.1:p.Leu259Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*191C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+244C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.655C>A
  hgvsp: ENSP00000458559.1:p.Leu219Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.829C>A
  hgvsp: ENSP00000388867.3:p.Leu277Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1123C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.586C>A
  hgvsp: ENSP00000458858.1:p.Leu196Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.655C>A
  hgvsp: ENSP00000345675.5:p.Leu219Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+244C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+244C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.493C>A
  hgvsp: ENSP00000459620.1:p.Leu165Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.829C>A
  hgvsp: ENSP00000369816.4:p.Leu277Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.493C>A
  hgvsp: ENSP00000459999.1:p.Leu165Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.655C>A
  hgvsp: ENSP00000458181.1:p.Leu219Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+244C>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu277Ile
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

17-7535314-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535314
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535314
    reference: chr 17
allele count: 43
allele frequency: 3.564559984083825e-4
allele num: 120632
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*195G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.659G>A
  hgvsp: ENSP00000458181.1:p.Ser220Asn
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.833G>A
  hgvsp: ENSP00000388867.3:p.Ser278Asn
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1127G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.659G>A
  hgvsp: ENSP00000345675.5:p.Ser220Asn
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1127G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.779G>A
  hgvsp: ENSP00000458973.1:p.Ser260Asn
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.497G>A
  hgvsp: ENSP00000459999.1:p.Ser166Asn
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.659G>A
  hgvsp: ENSP00000458559.1:p.Ser220Asn
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.497G>A
  hgvsp: ENSP00000459620.1:p.Ser166Asn
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+248G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.590G>A
  hgvsp: ENSP00000458858.1:p.Ser197Asn
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+248G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.461G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+248G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*791G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+248G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+248G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.833G>A
  hgvsp: ENSP00000369816.4:p.Ser278Asn
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser278Asn
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP

17-7535319-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535319
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535319
    reference: chr 17
allele count: 3
allele frequency: 2.489130795526202e-5
allele num: 120524
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.595C>T
  hgvsp: ENSP00000458858.1:p.His199Tyr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+253C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+253C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.838C>T
  hgvsp: ENSP00000369816.4:p.His280Tyr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.664C>T
  hgvsp: ENSP00000345675.5:p.His222Tyr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.502C>T
  hgvsp: ENSP00000459620.1:p.His168Tyr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.466C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.664C>T
  hgvsp: ENSP00000458559.1:p.His222Tyr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+253C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.838C>T
  hgvsp: ENSP00000388867.3:p.His280Tyr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*796C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.784C>T
  hgvsp: ENSP00000458973.1:p.His262Tyr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*200C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.502C>T
  hgvsp: ENSP00000459999.1:p.His168Tyr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.664C>T
  hgvsp: ENSP00000458181.1:p.His222Tyr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+253C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+253C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1132C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1132C>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4818
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His280Tyr
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/17-7535321-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535321
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535321
    reference: chr 17
allele count: 1
allele frequency: 8.301786544464368e-6
allele num: 120456
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.666C>A
  hgvsp: ENSP00000458559.1:p.His222Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+255C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.666C>A
  hgvsp: ENSP00000458181.1:p.His222Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+255C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*798C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.504C>A
  hgvsp: ENSP00000459999.1:p.His168Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.786C>A
  hgvsp: ENSP00000458973.1:p.His262Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.504C>A
  hgvsp: ENSP00000459620.1:p.His168Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.468C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1134C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+255C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.840C>A
  hgvsp: ENSP00000369816.4:p.His280Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.597C>A
  hgvsp: ENSP00000458858.1:p.His199Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1134C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.666C>A
  hgvsp: ENSP00000345675.5:p.His222Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.840C>A
  hgvsp: ENSP00000388867.3:p.His280Gln
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+255C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*202C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+255C>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His280Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

17-7535321-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535321
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535321
    reference: chr 17
allele count: 2
allele frequency: 1.660357308892874e-5
allele num: 120456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.468C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*202C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1134C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.666C>T
  hgvsp: ENST00000340624.5:c.666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*798C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+255C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1134C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+255C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.786C>T
  hgvsp: ENST00000575903.1:c.786C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.597C>T
  hgvsp: ENST00000571153.1:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.666C>T
  hgvsp: ENST00000575314.1:c.666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.504C>T
  hgvsp: ENST00000572262.1:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.504C>T
  hgvsp: ENST00000576728.1:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.666C>T
  hgvsp: ENST00000574539.1:c.666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.840C>T
  hgvsp: ENST00000416273.3:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+255C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+255C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+255C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.840C>T
  hgvsp: ENST00000380450.4:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His280His
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

17-7535330-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535330
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535329
    reference: chr 17
allele count: 1
allele frequency: 8.311032063961702e-6
allele num: 120322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+265delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.514delC
  hgvsp: ENSP00000459620.1:p.Gln172LysfsTer31
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+265delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.850delC
  hgvsp: ENSP00000369816.4:p.Gln284LysfsTer25
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.676delC
  hgvsp: ENSP00000458181.1:p.Gln226LysfsTer31
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1144delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.676delC
  hgvsp: ENSP00000458559.1:p.Gln226LysfsTer25
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+265delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.676delC
  hgvsp: ENSP00000345675.5:p.Gln226LysfsTer31
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1144delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.796delC
  hgvsp: ENSP00000458973.1:p.Gln266LysfsTer25
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+265delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.478delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.514delC
  hgvsp: ENSP00000459999.1:p.Gln172LysfsTer25
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*212delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*808delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.850delC
  hgvsp: ENSP00000388867.3:p.Gln284LysfsTer31
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+265delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.607delC
  hgvsp: ENSP00000458858.1:p.Gln203LysfsTer31
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gln284LysfsTer25
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: TC
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

17-7535333-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535333
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535333
    reference: chr 17
allele count: 1
allele frequency: 8.313381218409152e-6
allele num: 120288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.678A>T
  hgvsp: ENSP00000345675.5:p.Gln226His
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1146A>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.678A>T
  hgvsp: ENSP00000458559.1:p.Gln226His
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+267A>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1146A>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+267A>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+267A>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.516A>T
  hgvsp: ENSP00000459999.1:p.Gln172His
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.798A>T
  hgvsp: ENSP00000458973.1:p.Gln266His
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.852A>T
  hgvsp: ENSP00000369816.4:p.Gln284His
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+267A>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.852A>T
  hgvsp: ENSP00000388867.3:p.Gln284His
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.678A>T
  hgvsp: ENSP00000458181.1:p.Gln226His
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.516A>T
  hgvsp: ENSP00000459620.1:p.Gln172His
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.480A>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*810A>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.609A>T
  hgvsp: ENSP00000458858.1:p.Gln203His
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+267A>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*214A>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gln284His
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

17-7535335-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535335
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535336
    reference: chr 17
allele count: 2
allele frequency: 1.663312320154355e-5
allele num: 120242
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.678+5dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.678+5dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.485dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.678+5dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1151dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.516+5dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.852+5dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.516+5dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+272dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*810+5dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+272dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1151dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*214+5dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+272dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+272dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+272dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.609+5dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.852+5dupA
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.798+5dupA
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.852+5dupA
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

17-7535340-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535340
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535340
    reference: chr 17
allele count: 1
allele frequency: 8.322652595835345e-6
allele num: 120154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*810+7G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.852+7G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+274G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.678+7G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.609+7G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+274G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.678+7G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.852+7G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+274G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.798+7G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.516+7G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*214+7G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.678+7G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.516+7G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1153G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1153G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.487G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+274G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+274G>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.852+7G>A
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum

17-7535341-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535341
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535341
    reference: chr 17
allele count: 1
allele frequency: 8.323761008173934e-6
allele num: 120138
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1154G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+275G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.488G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.516+8G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*810+8G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.678+8G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.678+8G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*214+8G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+275G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.516+8G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.609+8G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+275G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.852+8G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.852+8G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+275G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1154G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+275G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.798+8G>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.678+8G>C
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.852+8G>C
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

17-7535343-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535343
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535343
    reference: chr 17
allele count: 1
allele frequency: 8.324592511196577e-6
allele num: 120126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*214+10G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*810+10G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+277G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.678+10G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.678+10G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1156G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.490G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.516+10G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+277G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.516+10G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+277G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1156G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.678+10G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+277G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.852+10G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.852+10G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.609+10G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.798+10G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+277G>T
  variant of: http://identifiers.org/hgnc/10839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/17-7535345-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535345
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535345
    reference: chr 17
allele count: 1
allele frequency: 8.327920185212944e-6
allele num: 120078
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1158C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*214+12C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.678+12C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*810+12C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.852+12C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+279C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.492C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.516+12C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+279C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.852+12C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+279C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.678+12C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.678+12C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1158C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.798+12C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.609+12C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+279C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+279C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.516+12C>A
  variant of: http://identifiers.org/hgnc/10839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4679
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

17-7535346-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535346
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535346
    reference: chr 17
allele count: 1
allele frequency: 8.326949338840222e-6
allele num: 120092
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1159A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*810+13A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+280A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+280A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.798+13A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.678+13A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.609+13A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+280A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.493A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1159A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.678+13A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+280A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*214+13A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.516+13A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.516+13A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.852+13A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.678+13A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+280A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.852+13A>G
  variant of: http://identifiers.org/hgnc/10839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

17-7535352-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535352
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535352
    reference: chr 17
allele count: 2
allele frequency: 1.667722891164404e-5
allele num: 119924
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+286G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.678+19G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.499G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.852+19G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+286G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1165G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.852+19G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.678+19G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1165G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+286G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*810+19G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.516+19G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.516+19G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*214+19G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+286G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+286G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.609+19G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.798+19G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.678+19G>A
  variant of: http://identifiers.org/hgnc/10839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

17-7535354-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535354
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535354
    reference: chr 17
allele count: 3
allele frequency: 2.503421342501419e-5
allele num: 119836
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.678+21A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+288A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*214+21A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+288A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.678+21A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.516+21A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+288A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.501A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.798+21A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.852+21A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.219+1167A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.852+21A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*810+21A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+288A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.516+21A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+288A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.678+21A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.312+1167A>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.609+21A>G
  variant of: http://identifiers.org/hgnc/10839
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4679
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

17-7535360-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535360
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535360
    reference: chr 17
allele count: 11
allele frequency: 9.184576591019154e-5
allele num: 119766
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.516+27T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-1162T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+294T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+294T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.852+27T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.507T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-1162T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.516+27T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+294T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*810+27T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.678+27T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*214+27T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.852+27T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.678+27T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+294T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.609+27T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+294T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.798+27T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.678+27T>A
  variant of: http://identifiers.org/hgnc/10839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP

17-7535366-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535366
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535366
    reference: chr 17
allele count: 3
allele frequency: 2.507019655034095e-5
allele num: 119664
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*810+33C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+300C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.678+33C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.609+33C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+300C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.852+33C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-1156C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.513C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-1156C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.678+33C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+300C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*214+33C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+300C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.852+33C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.516+33C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.678+33C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.516+33C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+300C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.798+33C>G
  variant of: http://identifiers.org/hgnc/10839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-7535370-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7535370
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7535370
    reference: chr 17
allele count: 1
allele frequency: 8.366800535475235e-6
allele num: 119520
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*214+37G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129214
  ensembl transcript: ENST00000576747
  gene symbol: SHBG
  hgvsc: ENST00000576747.1:n.517G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-1152G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.472+304G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.379+304G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-1152G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.715+304G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.852+37G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*810+37G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.852+37G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.678+37G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.678+37G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.609+37G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.541+304G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.678+37G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.798+37G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.634+304G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.516+37G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.516+37G>A
  variant of: http://identifiers.org/hgnc/10839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16674
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

17-7536019-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536019
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536019
    reference: chr 17
allele count: 8
allele frequency: 6.638343069569835e-5
allele num: 120512
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-503C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-503C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-503C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.679-51C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*215-51C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-503C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-503C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*811-51C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.853-51C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-503C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.799-51C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-503C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-503C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-503C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-503C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.517-51C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-503C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-503C>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2477
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

17-7536020-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536020
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536020
    reference: chr 17
allele count: 2
allele frequency: 1.659420530350801e-5
allele num: 120524
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-502G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.853-50G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-502G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-502G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-502G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-502G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.517-50G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*811-50G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-502G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-502G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.799-50G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*215-50G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-502G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-502G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-502G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-502G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-502G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.679-50G>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

17-7536037-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536037
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536037
    reference: chr 17
allele count: 1
allele frequency: 8.273077750384698e-6
allele num: 120874
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.679-33C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-485C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-485C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-485C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*215-33C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.853-33C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-485C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-485C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-485C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*811-33C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-485C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-485C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-485C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.517-33C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-485C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-485C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-485C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.799-33C>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/17-7536045-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536045
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536045
    reference: chr 17
allele count: 2
allele frequency: 1.654013463669594e-5
allele num: 120918
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*215-25C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.853-25C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-477C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-477C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-477C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-477C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-477C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*811-25C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.679-25C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-477C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-477C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-477C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.799-25C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-477C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-477C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-477C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-477C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.517-25C>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

17-7536045-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536045
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536045
    reference: chr 17
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-477C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*215-25C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-477C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-477C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-477C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-477C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-477C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-477C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.799-25C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-477C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*811-25C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-477C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.517-25C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.853-25C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-477C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-477C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.679-25C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-477C>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

17-7536046-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536046
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536046
    reference: chr 17
allele count: 4
allele frequency: 3.307042346677249e-5
allele num: 120954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-476G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*811-24G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*215-24G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-476G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-476G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-476G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-476G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-476G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.679-24G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.517-24G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-476G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-476G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-476G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-476G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-476G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-476G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.799-24G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.853-24G>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16235
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

17-7536054-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536054
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536054
    reference: chr 17
allele count: 1
allele frequency: 8.262823902696986e-6
allele num: 121024
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-468C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-468C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.517-16C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-468C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-468C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-468C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-468C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*811-16C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-468C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.853-16C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-468C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.679-16C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.799-16C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-468C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*215-16C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-468C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-468C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-468C>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

17-7536073-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536073
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536073
    reference: chr 17
allele count: 3
allele frequency: 2.475737769855417e-5
allele num: 121176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-449G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-449G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-449G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*218G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-449G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.682G>A
  hgvsp: ENSP00000458559.1:p.Val228Met
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.856G>A
  hgvsp: ENSP00000369816.4:p.Val286Met
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*814G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.802G>A
  hgvsp: ENSP00000458973.1:p.Val268Met
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-449G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-449G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-449G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-449G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-449G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.520G>A
  hgvsp: ENSP00000459999.1:p.Val174Met
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-449G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-449G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-449G>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val286Met
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

17-7536076-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536076
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536076
    reference: chr 17
allele count: 1
allele frequency: 8.251097395953662e-6
allele num: 121196
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.859G>T
  hgvsp: ENSP00000369816.4:p.Val287Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-446G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-446G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.805G>T
  hgvsp: ENSP00000458973.1:p.Val269Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-446G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.685G>T
  hgvsp: ENSP00000458559.1:p.Val229Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-446G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.523G>T
  hgvsp: ENSP00000459999.1:p.Val175Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-446G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*221G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-446G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-446G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-446G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*817G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-446G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-446G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-446G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-446G>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val287Leu
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

17-7536079-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536079
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536079
    reference: chr 17
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-443T>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.862T>G
  hgvsp: ENSP00000369816.4:p.Leu288Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.526T>G
  hgvsp: ENSP00000459999.1:p.Leu176Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-443T>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-443T>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-443T>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-443T>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-443T>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-443T>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-443T>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-443T>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.808T>G
  hgvsp: ENSP00000458973.1:p.Leu270Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.688T>G
  hgvsp: ENSP00000458559.1:p.Leu230Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*820T>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-443T>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-443T>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*224T>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-443T>G
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16539
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu288Val
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-7536084-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536084
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536084
    reference: chr 17
allele count: 16
allele frequency: 1.319326483830005e-4
allele num: 121274
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.693T>C
  hgvsp: ENST00000575314.1:c.693T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*229T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-438T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.531T>C
  hgvsp: ENST00000572262.1:c.531T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-438T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-438T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-438T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-438T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-438T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-438T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.867T>C
  hgvsp: ENST00000380450.4:c.867T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.813T>C
  hgvsp: ENST00000575903.1:c.813T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-438T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-438T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-438T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*825T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-438T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-438T>C
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16572
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser289Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

17-7536092-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536092
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536092
    reference: chr 17
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-430C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-430C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-430C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.701C>T
  hgvsp: ENSP00000458559.1:p.Ser234Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-430C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.875C>T
  hgvsp: ENSP00000369816.4:p.Ser292Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-430C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-430C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-430C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.539C>T
  hgvsp: ENSP00000459999.1:p.Ser180Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*237C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-430C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*833C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-430C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.821C>T
  hgvsp: ENSP00000458973.1:p.Ser274Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-430C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-430C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-430C>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser292Leu
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum

17-7536093-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536093
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536093
    reference: chr 17
allele count: 2
allele frequency: 1.648614339647526e-5
allele num: 121314
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*834G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-429G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-429G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-429G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-429G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-429G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-429G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.822G>A
  hgvsp: ENST00000575903.1:c.822G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.876G>A
  hgvsp: ENST00000380450.4:c.876G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-429G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.702G>A
  hgvsp: ENST00000575314.1:c.702G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.540G>A
  hgvsp: ENST00000572262.1:c.540G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-429G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*238G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-429G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-429G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-429G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-429G>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser292Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

17-7536093-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536093
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536093
    reference: chr 17
allele count: 12
allele frequency: 9.891686037885158e-5
allele num: 121314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-429G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.876G>T
  hgvsp: ENST00000380450.4:c.876G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-429G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-429G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*238G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-429G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*834G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-429G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-429G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-429G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-429G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.540G>T
  hgvsp: ENST00000572262.1:c.540G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-429G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-429G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-429G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.822G>T
  hgvsp: ENST00000575903.1:c.822G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.702G>T
  hgvsp: ENST00000575314.1:c.702G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-429G>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser292Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

17-7536101-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536101
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536101
    reference: chr 17
allele count: 2
allele frequency: 1.648152421135907e-5
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-421G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.548G>A
  hgvsp: ENSP00000459999.1:p.Gly183Glu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-421G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.710G>A
  hgvsp: ENSP00000458559.1:p.Gly237Glu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-421G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-421G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.830G>A
  hgvsp: ENSP00000458973.1:p.Gly277Glu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-421G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*246G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.884G>A
  hgvsp: ENSP00000369816.4:p.Gly295Glu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-421G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*842G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-421G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-421G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-421G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-421G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-421G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-421G>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly295Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

17-7536102-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536102
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536101
    reference: chr 17
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-419delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-419delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.886delC
  hgvsp: ENSP00000369816.4:p.Leu296TrpfsTer13
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-419delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.550delC
  hgvsp: ENSP00000459999.1:p.Leu184TrpfsTer13
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-419delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-419delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-419delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.832delC
  hgvsp: ENSP00000458973.1:p.Leu278TrpfsTer13
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-419delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*248delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-419delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-419delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-419delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-419delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*844delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-419delC
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.712delC
  hgvsp: ENSP00000458559.1:p.Leu238TrpfsTer13
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu296TrpfsTer13
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: GC
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

17-7536127-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536127
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536127
    reference: chr 17
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.910C>T
  hgvsp: ENSP00000369816.4:p.Leu304Phe
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*868C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-395C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-395C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.736C>T
  hgvsp: ENSP00000458559.1:p.Leu246Phe
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-395C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-395C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*272C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-395C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.574C>T
  hgvsp: ENSP00000459999.1:p.Leu192Phe
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.856C>T
  hgvsp: ENSP00000458973.1:p.Leu286Phe
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-395C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-395C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-395C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-395C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-395C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-395C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-395C>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu304Phe
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/17-7536130-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536130
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536130
    reference: chr 17
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*871C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-392C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.859C>A
  hgvsp: ENSP00000458973.1:p.Pro287Thr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-392C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-392C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-392C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.739C>A
  hgvsp: ENSP00000458559.1:p.Pro247Thr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*275C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-392C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-392C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.577C>A
  hgvsp: ENSP00000459999.1:p.Pro193Thr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.913C>A
  hgvsp: ENSP00000369816.4:p.Pro305Thr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-392C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-392C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-392C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-392C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-392C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-392C>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16605
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro305Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/17-7536143-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536143
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536143
    reference: chr 17
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-379A>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.872A>C
  hgvsp: ENSP00000458973.1:p.Lys291Thr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*884A>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.752A>C
  hgvsp: ENSP00000458559.1:p.Lys251Thr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-379A>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*288A>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.590A>C
  hgvsp: ENSP00000459999.1:p.Lys197Thr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-379A>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-379A>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-379A>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-379A>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.926A>C
  hgvsp: ENSP00000369816.4:p.Lys309Thr
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-379A>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-379A>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-379A>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-379A>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-379A>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-379A>C
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys309Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-7536153-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536153
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536153
    reference: chr 17
allele count: 2
allele frequency: 1.64774506088418e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-369G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.936G>A
  hgvsp: ENSP00000369816.4:p.Met312Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-369G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-369G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.882G>A
  hgvsp: ENSP00000458973.1:p.Met294Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-369G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-369G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*894G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-369G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-369G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*298G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.600G>A
  hgvsp: ENSP00000459999.1:p.Met200Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-369G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-369G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-369G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-369G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.762G>A
  hgvsp: ENSP00000458559.1:p.Met254Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-369G>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met312Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

17-7536159-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536159
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536159
    reference: chr 17
allele count: 500
allele frequency: 4.119498409873613e-3
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.942G>A
  hgvsp: ENST00000380450.4:c.942G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-363G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-363G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*304G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-363G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.768G>A
  hgvsp: ENST00000575314.1:c.768G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-363G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-363G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-363G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-363G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-363G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.606G>A
  hgvsp: ENST00000572262.1:c.606G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-363G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-363G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.888G>A
  hgvsp: ENST00000575903.1:c.888G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-363G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*900G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-363G>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8270
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg314Arg
num of homozygotes: 11
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

17-7536162-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536162
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536162
    reference: chr 17
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.609G>T
  hgvsp: ENST00000572262.1:c.609G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-360G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-360G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.945G>T
  hgvsp: ENST00000380450.4:c.945G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-360G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-360G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-360G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-360G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.891G>T
  hgvsp: ENST00000575903.1:c.891G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.771G>T
  hgvsp: ENST00000575314.1:c.771G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-360G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-360G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-360G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*307G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-360G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-360G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*903G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-360G>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val315Val
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ

17-7536180-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536180
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536180
    reference: chr 17
allele count: 1
allele frequency: 8.241848811525402e-6
allele num: 121332
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-342G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-342G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-342G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*921G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.963G>A
  hgvsp: ENST00000380450.4:c.963G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*325G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-342G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.627G>A
  hgvsp: ENST00000572262.1:c.627G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.789G>A
  hgvsp: ENST00000575314.1:c.789G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-342G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-342G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-342G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-342G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-342G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-342G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-342G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.909G>A
  hgvsp: ENST00000575903.1:c.909G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-342G>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser321Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/17-7536191-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536191
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536191
    reference: chr 17
allele count: 4
allele frequency: 3.297609233305853e-5
allele num: 121300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-331C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.800C>A
  hgvsp: ENSP00000458559.1:p.Ala267Asp
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.920C>A
  hgvsp: ENSP00000458973.1:p.Ala307Asp
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*336C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-331C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-331C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.638C>A
  hgvsp: ENSP00000459999.1:p.Ala213Asp
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-331C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-331C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-331C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-331C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-331C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.974C>A
  hgvsp: ENSP00000369816.4:p.Ala325Asp
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-331C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*932C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-331C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-331C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-331C>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala325Asp
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

17-7536197-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536197
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536197
    reference: chr 17
allele count: 2
allele frequency: 1.649294102124291e-5
allele num: 121264
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-325C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-325C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-325C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-325C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.644C>T
  hgvsp: ENSP00000459999.1:p.Ala215Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.980C>T
  hgvsp: ENSP00000369816.4:p.Ala327Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-325C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-325C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-325C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-325C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-325C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.806C>T
  hgvsp: ENSP00000458559.1:p.Ala269Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-325C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.926C>T
  hgvsp: ENSP00000458973.1:p.Ala309Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*938C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-325C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-325C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*342C>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala327Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff

17-7536201-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536201
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536201
    reference: chr 17
allele count: 1
allele frequency: 8.248783304462591e-6
allele num: 121230
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-321G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-321G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-321G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-321G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-321G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-321G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-321G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-321G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.984G>A
  hgvsp: ENST00000380450.4:c.984G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.810G>A
  hgvsp: ENST00000575314.1:c.810G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*942G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-321G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-321G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.648G>A
  hgvsp: ENST00000572262.1:c.648G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*346G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.930G>A
  hgvsp: ENST00000575903.1:c.930G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-321G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-321G>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8314
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu328Leu
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

17-7536205-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536205
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536205
    reference: chr 17
allele count: 1
allele frequency: 8.250280509537325e-6
allele num: 121208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.934C>T
  hgvsp: ENSP00000458973.1:p.Pro312Ser
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-317C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-317C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-317C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.988C>T
  hgvsp: ENSP00000369816.4:p.Pro330Ser
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*350C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-317C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-317C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-317C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-317C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.652C>T
  hgvsp: ENSP00000459999.1:p.Pro218Ser
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-317C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-317C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-317C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.814C>T
  hgvsp: ENSP00000458559.1:p.Pro272Ser
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*946C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-317C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-317C>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro330Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

17-7536207-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536207
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536207
    reference: chr 17
allele count: 1
allele frequency: 8.252459232851389e-6
allele num: 121176
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-315C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-315C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*352C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.654C>G
  hgvsp: ENST00000572262.1:c.654C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-315C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.816C>G
  hgvsp: ENST00000575314.1:c.816C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-315C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-315C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-315C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.990C>G
  hgvsp: ENST00000380450.4:c.990C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-315C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-315C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-315C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-315C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.936C>G
  hgvsp: ENST00000575903.1:c.936C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*948C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-315C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-315C>G
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro330Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-7536220-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536220
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536220
    reference: chr 17
allele count: 3
allele frequency: 2.478806206930742e-5
allele num: 121026
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.667C>G
  hgvsp: ENSP00000459999.1:p.Pro223Ala
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*961C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-302C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-302C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-302C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-302C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.949C>G
  hgvsp: ENSP00000458973.1:p.Pro317Ala
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-302C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-302C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-302C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.829C>G
  hgvsp: ENSP00000458559.1:p.Pro277Ala
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.1003C>G
  hgvsp: ENSP00000369816.4:p.Pro335Ala
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-302C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*365C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-302C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-302C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-302C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-302C>G
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro335Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

17-7536221-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536221
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536221
    reference: chr 17
allele count: 1
allele frequency: 8.265555775970376e-6
allele num: 120984
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-301C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.950C>T
  hgvsp: ENSP00000458973.1:p.Pro317Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.668C>T
  hgvsp: ENSP00000459999.1:p.Pro223Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.1004C>T
  hgvsp: ENSP00000369816.4:p.Pro335Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-301C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*962C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-301C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-301C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-301C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-301C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.830C>T
  hgvsp: ENSP00000458559.1:p.Pro277Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-301C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-301C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-301C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-301C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-301C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-301C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*366C>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro335Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

17-7536225-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536225
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536225
    reference: chr 17
allele count: 1
allele frequency: 8.267059076404159e-6
allele num: 120962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*966C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.834C>T
  hgvsp: ENST00000575314.1:c.834C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-297C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-297C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.954C>T
  hgvsp: ENST00000575903.1:c.954C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.672C>T
  hgvsp: ENST00000572262.1:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*370C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-297C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.1008C>T
  hgvsp: ENST00000380450.4:c.1008C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-297C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-297C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-297C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-297C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-297C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-297C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-297C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-297C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-297C>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu336Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

17-7536231-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536231
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536231
    reference: chr 17
allele count: 1
allele frequency: 8.274994621253496e-6
allele num: 120846
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-291C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.1014C>T
  hgvsp: ENST00000380450.4:c.1014C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-291C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*972C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-291C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-291C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-291C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.678C>T
  hgvsp: ENST00000572262.1:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.840C>T
  hgvsp: ENST00000575314.1:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.960C>T
  hgvsp: ENST00000575903.1:c.960C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*376C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-291C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-291C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-291C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-291C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-291C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-291C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-291C>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn338Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/17-7536232-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536232
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536232
    reference: chr 17
allele count: 1
allele frequency: 8.278145695364238e-6
allele num: 120800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.841C>A
  hgvsp: ENSP00000458559.1:p.Leu281Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-290C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-290C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.961C>A
  hgvsp: ENSP00000458973.1:p.Leu321Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-290C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.679C>A
  hgvsp: ENSP00000459999.1:p.Leu227Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*973C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*377C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-290C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.1015C>A
  hgvsp: ENSP00000369816.4:p.Leu339Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-290C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-290C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-290C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-290C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-290C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-290C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-290C>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-290C>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu339Ile
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-7536235-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536235
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536235
    reference: chr 17
allele count: 1
allele frequency: 8.286239870071759e-6
allele num: 120682
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-287T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.1018T>C
  hgvsp: ENSP00000369816.4:p.Trp340Arg
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-287T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-287T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.844T>C
  hgvsp: ENSP00000458559.1:p.Trp282Arg
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-287T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-287T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*380T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.682T>C
  hgvsp: ENSP00000459999.1:p.Trp228Arg
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.964T>C
  hgvsp: ENSP00000458973.1:p.Trp322Arg
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-287T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-287T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-287T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-287T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-287T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-287T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-287T>C
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*976T>C
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp340Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

17-7536253-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536253
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536253
    reference: chr 17
allele count: 1
allele frequency: 8.384056877441857e-6
allele num: 119274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-269C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-269C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-269C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-269C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-269C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*398C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.700C>T
  hgvsp: ENSP00000459999.1:p.Arg234Cys
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-269C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.862C>T
  hgvsp: ENSP00000458559.1:p.Arg288Cys
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.982C>T
  hgvsp: ENSP00000458973.1:p.Arg328Cys
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-269C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-269C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-269C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.1036C>T
  hgvsp: ENSP00000369816.4:p.Arg346Cys
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-269C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-269C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-269C>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*994C>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg346Cys
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD

17-7536254-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536254
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536254
    reference: chr 17
allele count: 9
allele frequency: 7.561754327003865e-5
allele num: 119020
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-268G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.701G>A
  hgvsp: ENSP00000459999.1:p.Arg234His
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-268G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-268G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-268G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-268G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.863G>A
  hgvsp: ENSP00000458559.1:p.Arg288His
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-268G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-268G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-268G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.1037G>A
  hgvsp: ENSP00000369816.4:p.Arg346His
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-268G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.983G>A
  hgvsp: ENSP00000458973.1:p.Arg328His
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*399G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-268G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*995G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-268G>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-268G>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg346His
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

17-7536254-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536254
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536254
    reference: chr 17
allele count: 2
allele frequency: 1.680389850445303e-5
allele num: 119020
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-268G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-268G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.1037G>T
  hgvsp: ENSP00000369816.4:p.Arg346Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.701G>T
  hgvsp: ENSP00000459999.1:p.Arg234Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-268G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-268G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-268G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.863G>T
  hgvsp: ENSP00000458559.1:p.Arg288Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-268G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-268G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*399G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-268G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*995G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.983G>T
  hgvsp: ENSP00000458973.1:p.Arg328Leu
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-268G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-268G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-268G>T
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-268G>T
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27105
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg346Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

17-7536259-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536259
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536259
    reference: chr 17
allele count: 1
allele frequency: 8.439673215853081e-6
allele num: 118488
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.988T>A
  hgvsp: ENSP00000458973.1:p.Phe330Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-263T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-263T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-263T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*404T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.1042T>A
  hgvsp: ENSP00000369816.4:p.Phe348Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-263T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.706T>A
  hgvsp: ENSP00000459999.1:p.Phe236Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-263T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-263T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.868T>A
  hgvsp: ENSP00000458559.1:p.Phe290Ile
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-263T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-263T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*1000T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-263T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-263T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-263T>A
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-263T>A
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15288
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe348Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

17-7536262-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7536262
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7536262
    reference: chr 17
allele count: 8
allele frequency: 6.77621548365238e-5
allele num: 118060
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459999
  ensembl transcript: ENST00000572262
  gene symbol: SHBG
  hgvsc: ENST00000572262.1:c.709C>G
  hgvsp: ENSP00000459999.1:p.Leu237Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000369816
  ensembl transcript: ENST00000380450
  gene symbol: SHBG
  hgvsc: ENST00000380450.4:c.1045C>G
  hgvsp: ENSP00000369816.4:p.Leu349Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458973
  ensembl transcript: ENST00000575903
  gene symbol: SHBG
  hgvsc: ENST00000575903.1:c.991C>G
  hgvsp: ENSP00000458973.1:p.Leu331Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000393426
  ensembl transcript: ENST00000441599
  gene symbol: SHBG
  hgvsc: ENST00000441599.2:c.716-260C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461133
  ensembl transcript: ENST00000576478
  gene symbol: SHBG
  hgvsc: ENST00000576478.1:c.380-260C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458816
  ensembl transcript: ENST00000572182
  gene symbol: SHBG
  hgvsc: ENST00000572182.1:c.220-260C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458181
  ensembl transcript: ENST00000574539
  gene symbol: SHBG
  hgvsc: ENST00000574539.1:c.679-260C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000345675
  ensembl transcript: ENST00000340624
  gene symbol: SHBG
  hgvsc: ENST00000340624.5:c.679-260C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458199
  ensembl transcript: ENST00000570353
  gene symbol: SHBG
  hgvsc: ENST00000570353.1:c.*407C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458559
  ensembl transcript: ENST00000575314
  gene symbol: SHBG
  hgvsc: ENST00000575314.1:c.871C>G
  hgvsp: ENSP00000458559.1:p.Leu291Val
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461162
  ensembl transcript: ENST00000570527
  gene symbol: SHBG
  hgvsc: ENST00000570527.1:c.*1003C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458875
  ensembl transcript: ENST00000570547
  gene symbol: SHBG
  hgvsc: ENST00000570547.1:c.542-260C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000461743
  ensembl transcript: ENST00000576152
  gene symbol: SHBG
  hgvsc: ENST00000576152.1:c.473-260C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459826
  ensembl transcript: ENST00000575618
  gene symbol: SHBG
  hgvsc: ENST00000575618.1:c.313-260C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000388867
  ensembl transcript: ENST00000416273
  gene symbol: SHBG
  hgvsc: ENST00000416273.3:c.853-260C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000459620
  ensembl transcript: ENST00000576728
  gene symbol: SHBG
  hgvsc: ENST00000576728.1:c.517-260C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000460219
  ensembl transcript: ENST00000576830
  gene symbol: SHBG
  hgvsc: ENST00000576830.1:c.635-260C>G
  variant of: http://identifiers.org/hgnc/10839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129214
  ensembl protein: ENSP00000458858
  ensembl transcript: ENST00000571153
  gene symbol: SHBG
  hgvsc: ENST00000571153.1:c.610-260C>G
  variant of: http://identifiers.org/hgnc/10839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu349Val
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 140
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 625
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1402
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1050
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3868
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 870
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3213
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4099
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4207
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4815
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2012
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4596
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4675
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 126
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1221
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16713
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 2245
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54539
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3038
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 760
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.003003003003003e-5
allele num: 66600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.09e-1

DP
type: SiteQuality
SIO_000300: 4.864783e6

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

MQRankSum
type: SiteQuality
SIO_000300: -3.42e-1

FS
type: SiteQuality
SIO_000300: 3.272e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.874e0

QD
type: SiteQuality
SIO_000300: 1.401e1

MQ
type: SiteQuality
SIO_000300: 5.981e1

GenotypeDepth
all individuals: 200
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 625
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4596
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 871
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4675
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4815
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2245
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4764
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 192
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1032
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1163
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1952
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4099
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16712
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1402
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4206
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3213
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2900
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54539
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 428
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503216884132043e-5
allele num: 66524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.776e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.931e1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.5e-2

DP
type: SiteQuality
SIO_000300: 4.86243e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.02e-1

QD
type: SiteQuality
SIO_000300: 1.167e1

GenotypeDepth
all individuals: 76
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1158
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1911
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 231
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1403
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4596
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16711
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4815
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4764
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 623
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 217
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4206
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1018
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4675
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4099
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3213
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2245
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2876
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54538
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163873370577281e-4
allele num: 8592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.398e0

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

FS
type: SiteQuality
SIO_000300: 2.57e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

QD
type: SiteQuality
SIO_000300: 1.308e1

DP
type: SiteQuality
SIO_000300: 4.861096e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-1

GenotypeDepth
all individuals: 1158
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2245
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 231
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4815
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 217
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4764
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4596
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3213
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1911
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4675
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 870
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4206
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4099
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 623
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1018
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16711
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2876
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54538
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

DP
type: SiteQuality
SIO_000300: 4.861096e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.398e0

VQSLOD
type: SiteQuality
SIO_000300: 2.6e0

FS
type: SiteQuality
SIO_000300: 2.57e0

QD
type: SiteQuality
SIO_000300: 1.308e1

GenotypeDepth
all individuals: 278
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3213
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4815
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4100
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4596
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1404
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2245
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 330
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1107
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1827
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 995
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 868
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4206
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4675
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4764
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 611
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54538
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 68
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2750
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505888022166672e-5
allele num: 66406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e0

FS
type: SiteQuality
SIO_000300: 2.775e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

DP
type: SiteQuality
SIO_000300: 4.857966e6

QD
type: SiteQuality
SIO_000300: 1.4e1

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

GenotypeDepth
all individuals: 3213
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16710
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 1773
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2245
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1071
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variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 9.25e1
variant carriers: 0

GenotypeDepth
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bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 867
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 406
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4206
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 609
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variant carriers: 0

GenotypeDepth
all individuals: 4100
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4596
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variant carriers: 0

GenotypeDepth
all individuals: 1402
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4815
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4675
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
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variant carriers: 0

GenotypeQuality
all individuals: 420
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variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2644
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54538
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 434
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.522431259044862e-5
allele num: 66336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.855849e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 1.198e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.514e0

FS
type: SiteQuality
SIO_000300: 5.669999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeDepth
all individuals: 519
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1679
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 123
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3868
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variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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Latino
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European (Non-Finnish)
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Other
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South Asian
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InbreedingCoeff
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MQ
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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ReadPosRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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VQSLOD
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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East Asian
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European (Finnish)
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African
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MQ
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FS
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QD
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DP
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MQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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South Asian
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African
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BaseQRankSum
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MQ
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FS
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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Latino
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European (Non-Finnish)
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DP
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MQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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FS
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MQ
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MQ
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South Asian
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Latino
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African
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FS
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VQSLOD
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MQRankSum
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Latino
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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East Asian
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European (Finnish)
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MQ
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ClippingRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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MQRankSum
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QD
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FS
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ReadPosRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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Other
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Latino
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East Asian
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FS
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MQRankSum
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BaseQRankSum
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VQSLOD
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MQ
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QD
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DP
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ReadPosRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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South Asian
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African
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Other
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East Asian
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FS
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InbreedingCoeff
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MQ
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ClippingRankSum
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QD
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MQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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South Asian
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East Asian
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European (Finnish)
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Latino
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FS
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VQSLOD
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MQ
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QD
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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South Asian
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East Asian
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European (Non-Finnish)
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African
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QD
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MQ
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 3.531904874028726e-4
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Other
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MQRankSum
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FS
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QD
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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DP
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MQ
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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Other
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European (Non-Finnish)
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allele num: 65570
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African
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Latino
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East Asian
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South Asian
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MQ
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ReadPosRankSum
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QD
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VQSLOD
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FS
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 6.081245439065921e-5
allele num: 16444
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African
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allele frequency: 1.953125e-4
allele num: 10240
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Latino
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allele frequency: 8.70170553428472e-5
allele num: 11492
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 6.038647342995169e-5
allele num: 66240
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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QD
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FS
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SIO_000300: 2.564e0

MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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VQSLOD
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ClippingRankSum
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SIO_000300: -2.59e-1

MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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Latino
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Other
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European (Non-Finnish)
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allele num: 66262
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South Asian
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QD
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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FS
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MQ
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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Other
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European (Finnish)
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African
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Latino
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European (Non-Finnish)
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MQRankSum
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DP
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BaseQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

South Asian
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Latino
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Other
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African
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East Asian
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European (Non-Finnish)
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allele num: 66484
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ReadPosRankSum
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MQRankSum
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FS
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DP
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BaseQRankSum
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QD
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ClippingRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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Other
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African
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East Asian
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Latino
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MQ
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ReadPosRankSum
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QD
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VQSLOD
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MQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Other
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European (Finnish)
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African
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Latino
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InbreedingCoeff
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BaseQRankSum
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QD
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FS
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ClippingRankSum
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MQ
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MQRankSum
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DP
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ReadPosRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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Other
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European (Non-Finnish)
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South Asian
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DP
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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FS
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QD
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MQ
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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East Asian
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European (Non-Finnish)
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European (Finnish)
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VQSLOD
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FS
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BaseQRankSum
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QD
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MQ
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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European (Non-Finnish)
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East Asian
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African
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South Asian
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MQ
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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DP
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VQSLOD
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11566
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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FS
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InbreedingCoeff
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MQRankSum
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DP
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BaseQRankSum
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MQ
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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Latino
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African
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allele num: 10354
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQ
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MQRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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QD
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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European (Non-Finnish)
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allele count: 0
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allele num: 66700
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African
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East Asian
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BaseQRankSum
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SIO_000300: 5.1e-2

MQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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FS
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InbreedingCoeff
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DP
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

Latino
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Other
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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FS
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VQSLOD
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QD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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MQ
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DP
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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European (Finnish)
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European (Non-Finnish)
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allele num: 66700
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African
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East Asian
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Latino
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Other
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QD
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FS
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InbreedingCoeff
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MQRankSum
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MQ
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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MQ
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QD
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VQSLOD
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FS
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VQSLOD
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InbreedingCoeff
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MQ
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African
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VQSLOD
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DP
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MQRankSum
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FS
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MQ
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 2
allele frequency: 2.212389380530973e-3
allele num: 904
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 8
allele frequency: 1.198861081972126e-4
allele num: 66730
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 12
allele frequency: 1.037344398340249e-3
allele num: 11568
num of homozygotes: 0

African
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allele count: 478
allele frequency: 4.597037891902289e-2
allele num: 10398
num of homozygotes: 11

MQRankSum
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SIO_000300: 3.84e-1

FS
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SIO_000300: 0.0e0

DP
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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MQ
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.52e-1

ReadPosRankSum
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SIO_000300: 5.85e-1

QD
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SIO_000300: 1.378e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
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SIO_000300: 8.28e-1

BaseQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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InbreedingCoeff
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DP
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ClippingRankSum
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QD
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 14
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
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BaseQRankSum
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SIO_000300: -5.69e-1

QD
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MQRankSum
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SIO_000300: 1.17e0

MQ
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SIO_000300: 6.0e1

VQSLOD
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ClippingRankSum
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InbreedingCoeff
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FS
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SIO_000300: 1.505e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.48e-1

DP
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SIO_000300: 1.728307e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.059871530723549e-5
allele num: 16502
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.312138728323699e-4
allele num: 8650
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European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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African
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allele count: 1
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allele num: 10396
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FS
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InbreedingCoeff
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BaseQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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QD
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MQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.999490086685263e-5
allele num: 66678
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
type: Population
allele count: 0
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Latino
type: Population
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQ
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DP
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QD
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FS
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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European (Non-Finnish)
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MQRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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FS
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MQ
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BaseQRankSum
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QD
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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African
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South Asian
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European (Non-Finnish)
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Other
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DP
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BaseQRankSum
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MQRankSum
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FS
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ClippingRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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South Asian
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East Asian
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European (Finnish)
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Other
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QD
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MQRankSum
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FS
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MQ
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VQSLOD
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DP
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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European (Finnish)
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Other
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African
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Latino
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ReadPosRankSum
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VQSLOD
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MQ
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ClippingRankSum
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FS
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MQRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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Other
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European (Non-Finnish)
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African
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East Asian
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FS
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ClippingRankSum
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QD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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DP
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MQ
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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European (Finnish)
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South Asian
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ClippingRankSum
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QD
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MQRankSum
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FS
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VQSLOD
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DP
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MQ
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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Latino
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East Asian
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South Asian
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QD
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VQSLOD
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MQ
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FS
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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South Asian
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European (Non-Finnish)
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Other
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FS
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MQ
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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African
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Other
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East Asian
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South Asian
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FS
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DP
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BaseQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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QD
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ReadPosRankSum
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South Asian
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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VQSLOD
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DP
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Latino
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East Asian
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African
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European (Finnish)
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MQ
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VQSLOD
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FS
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GenotypeDepth
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bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1151
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1894
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1488
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 701
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4675
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1947
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2297
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38319
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1133
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6496
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.043954705953975e-5
allele num: 65704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.670521e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.44e-1

FS
type: SiteQuality
SIO_000300: 3.838e0

MQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.333e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.259e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.629999999999999e-1

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2419
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7353
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26633
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 947
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 60
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1412
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1047
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 37
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2138
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 299
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1479
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 701
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 501
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37815
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2845
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4661
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 266
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6341
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1912
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528257480820369e-5
allele num: 65434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11092
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.39e-1

DP
type: SiteQuality
SIO_000300: 1.655366e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.932e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.14e-1

QD
type: SiteQuality
SIO_000300: 1.239e1

MQRankSum
type: SiteQuality
SIO_000300: -9.27e-1

GenotypeDepth
all individuals: 26168
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1480
bin: 4.25e1
variant carriers: 3

GenotypeDepth
all individuals: 60
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 701
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 300
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 37
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7233
bin: 3.25e1
variant carriers: 1