19-18119231-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119231
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119231
    reference: chr 19
allele count: 1
allele frequency: 1.097213078779899e-5
allele num: 91140
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-289C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-289C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.112C>G
  hgvsp: ENSP00000222250.3:p.Leu38Val
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.60-32C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-289C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.253C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.253C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.112C>G
  hgvsp: ENSP00000477100.1:p.Leu38Val
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18887
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8644
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1538
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17529
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu38Val
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-18119235-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119235
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119235
    reference: chr 19
allele count: 1
allele frequency: 1.133195838904879e-5
allele num: 88246
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-285C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.60-28C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-285C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.257C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.116C>G
  hgvsp: ENSP00000477100.1:p.Ser39Ter
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.116C>G
  hgvsp: ENSP00000222250.3:p.Ser39Ter
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-285C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.257C>G
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4146
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20970
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5067
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser39Ter
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

19-18119241-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119241
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119241
    reference: chr 19
allele count: 2
allele frequency: 2.402748744563781e-5
allele num: 83238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.122C>T
  hgvsp: ENSP00000477100.1:p.Ala41Val
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-279C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.122C>T
  hgvsp: ENSP00000222250.3:p.Ala41Val
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.263C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.60-22C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.263C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-279C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-279C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10064
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22562
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4906
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29713
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1673
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2616
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala41Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS

19-18119243-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119243
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119243
    reference: chr 19
allele count: 2
allele frequency: 2.497689637085696e-5
allele num: 80074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.265G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.265G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-277G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-277G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.124G>A
  hgvsp: ENSP00000477100.1:p.Ala42Thr
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-277G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.124G>A
  hgvsp: ENSP00000222250.3:p.Ala42Thr
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.60-20G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22583
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10535
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7809
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2677
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala42Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS

19-18119247-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119247
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119247
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 76276
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.128G>A
  hgvsp: ENSP00000222250.3:p.Arg43His
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-273G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.60-16G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.128G>A
  hgvsp: ENSP00000477100.1:p.Arg43His
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-273G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.269G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.269G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-273G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11448
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7006
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30255
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2575
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg43His
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum

19-18119249-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119249
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119249
    reference: chr 19
allele count: 1
allele frequency: 1.334044823906083e-5
allele num: 74960
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.130G>C
  hgvsp: ENSP00000222250.3:p.Val44Leu
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-271G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.271G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.60-14G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.130G>C
  hgvsp: ENSP00000477100.1:p.Val44Leu
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-271G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-271G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.271G>C
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11715
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6960
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val44Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

19-18119253-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119253
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119253
    reference: chr 19
allele count: 1
allele frequency: 1.526251526251526e-5
allele num: 65520
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.60-10G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-267G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.275G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-267G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.134G>A
  hgvsp: ENSP00000477100.1:p.Gly45Asp
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.134G>A
  hgvsp: ENSP00000222250.3:p.Gly45Asp
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.275G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-267G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13032
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9690
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14769
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1354
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2368
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gly45Asp
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

19-18119262-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119262
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119262
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 38398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-258G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-258G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.284G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.60-1G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.143G>A
  hgvsp: ENSP00000477100.1:p.Arg48Lys
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.143G>A
  hgvsp: ENSP00000222250.3:p.Arg48Lys
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-258G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.284G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: splice acceptor
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13424
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18570
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23395
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15020
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1511
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
hgvs: n.60-1G>A
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

19-18119265-TGCGCGCGCGGGGCCGCGCCCACGTGCACTGGACCGAGTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119265
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119226
    reference: chr 19
allele count: 1
allele frequency: 2.975127930501012e-5
allele num: 33612
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsp: ENSP00000477100.1:p.Ala51_Arg63del
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsp: ENSP00000222250.3:p.Ala51_Arg63del
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20783
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12959
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala51_Arg63del
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: TGCGCGCGCGGGGCCGCGCCCACGTGCACTGGACCGAGTC
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

19-18119268-GCGCGCGGGGC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119268
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119258
    reference: chr 19
allele count: 1
allele frequency: 3.949447077409162e-5
allele num: 25320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsp: ENSP00000222250.3:p.Arg52ProfsTer28
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsp: ENSP00000477100.1:p.Arg52ProfsTer28
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.71_80delGGGGCCGCGC
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24741
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6709
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25152
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1177
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2333
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2689
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg52ProfsTer28
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: GCGCGCGGGGC
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

19-18119270-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119270
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119270
    reference: chr 19
allele count: 5
allele frequency: 2.874885004599816e-4
allele num: 17392
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.151G>A
  hgvsp: ENSP00000222250.3:p.Ala51Thr
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.292G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.292G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-250G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-250G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.67G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-250G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.151G>A
  hgvsp: ENSP00000477100.1:p.Ala51Thr
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10916
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28295
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24683
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2068
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5994
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6878
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2620
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Ala51Thr
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-18119275-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119275
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119275
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 17440
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.297G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.156G>A
  hgvsp: ENST00000593560.2:c.156G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-245G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.297G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.72G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.156G>A
  hgvsp: ENST00000222250.4:c.156G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-245G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-245G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 10573
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3605
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29985
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4987
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg52Arg
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

19-18119277-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119277
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119277
    reference: chr 19
allele count: 1
allele frequency: 6.055468087683178e-5
allele num: 16514
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.74G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-243G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.158G>C
  hgvsp: ENSP00000222250.3:p.Gly53Ala
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.299G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.158G>C
  hgvsp: ENSP00000477100.1:p.Gly53Ala
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-243G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.299G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-243G>C
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30513
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6836
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2680
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly53Ala
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

19-18119294-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119294
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119294
    reference: chr 19
allele count: 1
allele frequency: 6.853070175438596e-5
allele num: 14592
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.316T>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.316T>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-226T>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.175T>C
  hgvsp: ENSP00000477100.1:p.Trp59Arg
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.91T>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-226T>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.175T>C
  hgvsp: ENSP00000222250.3:p.Trp59Arg
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-226T>C
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33774
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10603
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31018
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Trp59Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

19-18119296-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119296
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119296
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 14338
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.177G>A
  hgvsp: ENSP00000222250.3:p.Trp59Ter
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.318G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.93G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.177G>A
  hgvsp: ENSP00000477100.1:p.Trp59Ter
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.318G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-224G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-224G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-224G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: stop gained
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10698
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33956
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1859
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2615
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31057
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Trp59Ter
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP

19-18119313-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119313
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119313
    reference: chr 19
allele count: 3
allele frequency: 2.082465639316951e-4
allele num: 14406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-207C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.194C>G
  hgvsp: ENSP00000222250.3:p.Ala65Gly
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-207C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.194C>G
  hgvsp: ENSP00000477100.1:p.Ala65Gly
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.335C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.110C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-207C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.335C>G
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33442
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14520
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31415
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10603
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala65Gly
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-18119314-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119314
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119314
    reference: chr 19
allele count: 6
allele frequency: 4.115790917821375e-4
allele num: 14578
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-206G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-206G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.111G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.336G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.195G>A
  hgvsp: ENST00000593560.2:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-206G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.336G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.195G>A
  hgvsp: ENST00000222250.4:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33024
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1961
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2203
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3545
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1845
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala65Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-18119315-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119315
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119315
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 14716
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.112G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.196G>A
  hgvsp: ENSP00000477100.1:p.Gly66Ser
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.337G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-205G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-205G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-205G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.337G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.196G>A
  hgvsp: ENSP00000222250.3:p.Gly66Ser
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32855
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15493
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3594
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12038
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly66Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD

19-18119317-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119317
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119317
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 14796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-203C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-203C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.339C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-203C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.114C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.339C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.198C>T
  hgvsp: ENST00000222250.4:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.198C>T
  hgvsp: ENST00000593560.2:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16306
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 32364
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30743
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2109
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly66Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff

19-18119324-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119324
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119324
    reference: chr 19
allele count: 1
allele frequency: 6.3403499873193e-5
allele num: 15772
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-196A>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-196A>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.205A>G
  hgvsp: ENSP00000222250.3:p.Thr69Ala
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.346A>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.346A>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-196A>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.121A>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.205A>G
  hgvsp: ENSP00000477100.1:p.Thr69Ala
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28871
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17441
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3896
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr69Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

19-18119328-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119328
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119328
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 16536
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.350C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.125C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.209C>T
  hgvsp: ENSP00000477100.1:p.Ala70Val
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-192C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.350C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.209C>T
  hgvsp: ENSP00000222250.3:p.Ala70Val
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-192C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-192C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26421
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23499
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1896
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25566
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala70Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP

19-18119332-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119332
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119332
    reference: chr 19
allele count: 1
allele frequency: 5.8459020226821e-5
allele num: 17106
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.213C>T
  hgvsp: ENST00000593560.2:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-188C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.213C>T
  hgvsp: ENST00000222250.4:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.354C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.354C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.129C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-188C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-188C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25955
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24036
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1429
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23301
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Tyr71Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-18119334-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119334
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119334
    reference: chr 19
allele count: 2
allele frequency: 1.148897058823529e-4
allele num: 17408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.356C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-186C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.215C>T
  hgvsp: ENSP00000477100.1:p.Thr72Met
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.215C>T
  hgvsp: ENSP00000222250.3:p.Thr72Met
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.356C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.131C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-186C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-186C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26789
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr72Met
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

19-18119344-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119344
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119344
    reference: chr 19
allele count: 1
allele frequency: 5.04693650953871e-5
allele num: 19814
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.366C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.225C>T
  hgvsp: ENST00000593560.2:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.366C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.225C>T
  hgvsp: ENST00000222250.4:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.141C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-176C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-176C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-176C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31313
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17992
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17498
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4561
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2223
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr75Tyr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ

19-18119352-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119352
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119352
    reference: chr 19
allele count: 1
allele frequency: 4.49802087081684e-5
allele num: 22232
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.233G>T
  hgvsp: ENSP00000222250.3:p.Arg78Leu
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-168G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.149G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-168G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.233G>T
  hgvsp: ENSP00000477100.1:p.Arg78Leu
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.374G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.374G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-168G>T
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33689
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14661
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14252
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30584
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4739
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg78Leu
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

19-18119362-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119362
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119362
    reference: chr 19
allele count: 1
allele frequency: 3.622400927334638e-5
allele num: 27606
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.159C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-158C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.243C>T
  hgvsp: ENST00000222250.4:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-158C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.384C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-158C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.384C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.243C>T
  hgvsp: ENST00000593560.2:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5018
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10297
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1751
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5527
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1742
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val81Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum

19-18119368-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119368
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119368
    reference: chr 19
allele count: 1
allele frequency: 3.163355687713527e-5
allele num: 31612
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-152C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.249C>T
  hgvsp: ENST00000593560.2:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.165C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-152C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.390C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.249C>T
  hgvsp: ENST00000222250.4:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-152C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.390C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5648
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7984
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33788
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser83Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

19-18119374-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119374
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119374
    reference: chr 19
allele count: 3
allele frequency: 8.026541095890411e-5
allele num: 37376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.171C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.396C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-146C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.396C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.255C>T
  hgvsp: ENST00000593560.2:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-146C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.255C>T
  hgvsp: ENST00000222250.4:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-146C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34948
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7067
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1183
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33855
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7868
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6127
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg85Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

19-18119375-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119375
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119375
    reference: chr 19
allele count: 1
allele frequency: 2.592957527355702e-5
allele num: 38566
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.397G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-145G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-145G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.172G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-145G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.256G>A
  hgvsp: ENSP00000477100.1:p.Ala86Thr
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.256G>A
  hgvsp: ENSP00000222250.3:p.Ala86Thr
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.397G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6277
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34579
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7623
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5865
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33887
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2098
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala86Thr
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

19-18119380-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119380
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119380
    reference: chr 19
allele count: 58
allele frequency: 1.330885727397889e-3
allele num: 43580
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.261G>A
  hgvsp: ENST00000593560.2:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.177G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.261G>A
  hgvsp: ENST00000222250.4:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-140G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.402G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-140G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-140G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.402G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6577
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33318
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4782
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9235
  bin: 2.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 9.75e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2207
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 9791
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32896
  bin: 2.25e1
  variant carriers: 1
hgvs: p.Thr87Thr
num of homozygotes: 1
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

19-18119388-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119388
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119388
    reference: chr 19
allele count: 4
allele frequency: 7.967810047408469e-5
allele num: 50202
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.269C>T
  hgvsp: ENSP00000222250.3:p.Ala90Val
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.410C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-132C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-132C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.185C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.410C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.269C>T
  hgvsp: ENSP00000477100.1:p.Ala90Val
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-132C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6885
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11568
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2527
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2365
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala90Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS

19-18119389-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119389
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119389
    reference: chr 19
allele count: 54
allele frequency: 1.043276661514683e-3
allele num: 51760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.411G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.270G>A
  hgvsp: ENST00000593560.2:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.186G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-131G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.270G>A
  hgvsp: ENST00000222250.4:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-131G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-131G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.411G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6941
  bin: 1.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12028
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 1.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3006
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 30379
  bin: 7.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30169
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11351
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.75e1
  variant carriers: 1
hgvs: p.Ala90Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

19-18119395-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119395
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119396
    reference: chr 19
allele count: 54
allele frequency: 9.16683642289672e-4
allele num: 58908
alternate allele: TA
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.274+3dupA
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.277dupA
  hgvsp: ENSP00000477100.1:p.Thr93AsnfsTer55
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.190+3dupA
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.418dupA
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-124dupA
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-124dupA
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-124dupA
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.415+3dupA
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27616
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7017
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14785
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1813
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2328
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2940
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1168
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 5.75e1
  variant carriers: 1
hgvs: p.Thr93AsnfsTer55
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/19-18119396-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119396
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119396
    reference: chr 19
allele count: 1
allele frequency: 1.663948883490299e-5
allele num: 60098
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-124A>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.190+3A>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.277A>C
  hgvsp: ENSP00000477100.1:p.Thr93Pro
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.274+3A>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.418A>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-124A>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.415+3A>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-124A>C
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6928
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1817
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1037
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14424
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27446
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr93Pro
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

19-18119397-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119397
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119397
    reference: chr 19
allele count: 1
allele frequency: 1.636125654450262e-5
allele num: 61120
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.415+4C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.274+4C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.419C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-123C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-123C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-123C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.278C>T
  hgvsp: ENSP00000477100.1:p.Thr93Met
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.190+4C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6946
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2375
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1873
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr93Met
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

19-18119398-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119398
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119398
    reference: chr 19
allele count: 1
allele frequency: 1.582128278960858e-5
allele num: 63206
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.274+5G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-122G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.415+5G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-122G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-122G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.190+5G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.279G>A
  hgvsp: ENST00000593560.2:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.420G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16640
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25755
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6836
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15886
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2342
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 9.75e1
  variant carriers: 1
hgvs: c.274+5G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

19-18119399-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119399
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119399
    reference: chr 19
allele count: 15502
allele frequency: 2.061545826905687e-1
allele num: 75196
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-121G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.274+6G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.421G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.415+6G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.190+6G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.280G>A
  hgvsp: ENSP00000477100.1:p.Asp94Asn
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-121G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-121G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.75e1
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 2.5e0
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 3.25e1
  variant carriers: 943
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 8329
  bin: 1.25e1
  variant carriers: 3181
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 1.75e1
  variant carriers: 4047
genotype depth: GenotypeDepth
  all individuals: 19741
  bin: 7.5e0
  variant carriers: 1293
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 4916
  bin: 2.75e1
  variant carriers: 1992
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 15576
  bin: 2.25e1
  variant carriers: 3291
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 3.75e1
  variant carriers: 457
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.25e1
  variant carriers: 261
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 7.5e0
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 3.25e1
  variant carriers: 117
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 9.25e1
  variant carriers: 230
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 1.75e1
  variant carriers: 86
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 2.5e0
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 4.75e1
  variant carriers: 172
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 7.75e1
  variant carriers: 192
hgvs: p.Asp94Asn
num of homozygotes: 1155
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

19-18119428-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119428
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119428
    reference: chr 19
allele count: 1
allele frequency: 9.82858940084919e-6
allele num: 101744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.309G>A
  hgvsp: ENST00000593560.2:c.309G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.190+35G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-92G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-92G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.450G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-92G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.274+35G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.415+35G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1762
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1673
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2078
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu103Leu
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ

19-18119428-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119428
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119428
    reference: chr 19
allele count: 1
allele frequency: 9.82858940084919e-6
allele num: 101744
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.309G>C
  hgvsp: ENSP00000477100.1:p.Leu103Phe
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-92G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.190+35G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.450G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.415+35G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.274+35G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-92G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-92G>C
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9952
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1762
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5143
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu103Phe
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

19-18119434-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119434
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119434
    reference: chr 19
allele count: 5
allele frequency: 4.771629797873762e-5
allele num: 104786
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-86C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.315C>T
  hgvsp: ENST00000593560.2:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-86C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.456C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.274+41C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-86C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.415+41C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.190+41C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32448
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9340
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1667
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30693
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5618
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala105Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

19-18119437-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119437
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119437
    reference: chr 19
allele count: 102
allele frequency: 9.565608822867432e-4
allele num: 106632
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.274+44C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.459C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.318C>T
  hgvsp: ENST00000593560.2:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.415+44C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-83C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-83C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.190+44C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-83C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 9885
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 6701
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3524
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33179
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5835
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1329
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser106Ser
num of homozygotes: 1
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-18119438-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119438
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119438
    reference: chr 19
allele count: 2
allele frequency: 1.864940974618153e-5
allele num: 107242
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.319C>A
  hgvsp: ENSP00000477100.1:p.His107Asn
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.274+45C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-82C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-82C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.460C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.415+45C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-82C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.190+45C>A
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10107
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33296
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7277
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1284
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2538
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 32730
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His107Asn
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-18119450-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119450
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119450
    reference: chr 19
allele count: 1
allele frequency: 8.911861687906604e-6
allele num: 112210
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.415+57G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.274+57G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.331G>C
  hgvsp: ENSP00000477100.1:p.Gly111Arg
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-70G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.472G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-70G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-70G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.190+57G>C
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11340
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35132
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4849
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6671
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35296
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2464
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly111Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

19-18119454-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119454
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119454
    reference: chr 19
allele count: 5
allele frequency: 4.395913558755781e-5
allele num: 113742
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.415+61G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.190+61G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.274+61G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.476G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-66G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.335G>A
  hgvsp: ENSP00000477100.1:p.Gly112Asp
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-66G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-66G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5065
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11885
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4093
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly112Asp
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

19-18119454-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119454
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119454
    reference: chr 19
allele count: 1
allele frequency: 8.791827117511561e-6
allele num: 113742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.335G>T
  hgvsp: ENSP00000477100.1:p.Gly112Val
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-66G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.274+61G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.415+61G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-66G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.476G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-66G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.190+61G>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4093
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35753
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly112Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

19-18119457-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119457
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119457
    reference: chr 19
allele count: 1
allele frequency: 8.724633129176919e-6
allele num: 114618
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.338C>T
  hgvsp: ENSP00000477100.1:p.Thr113Ile
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-63C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.479C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-63C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-63C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-63C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-63C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-63C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3637
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr113Ile
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

19-18119461-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119461
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119461
    reference: chr 19
allele count: 987
allele frequency: 8.527145177454469e-3
allele num: 115748
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.342C>T
  hgvsp: ENST00000593560.2:c.342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.483C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-59C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-59C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-59C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-59C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-59C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-59C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12345
  bin: 2.75e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 5464
  bin: 3.25e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 1.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 3.75e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 1.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 35406
  bin: 2.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.25e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 36138
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 927
genotype quality: GenotypeQuality
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3242
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3028
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Ser114Ser
num of homozygotes: 34
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

19-18119463-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119463
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119463
    reference: chr 19
allele count: 1
allele frequency: 8.597417335832316e-6
allele num: 116314
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-57T>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.344T>G
  hgvsp: ENSP00000477100.1:p.Val115Gly
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.485T>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-57T>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-57T>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-57T>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-57T>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-57T>G
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3346
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2185
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val115Gly
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

19-18119469-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119469
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119469
    reference: chr 19
allele count: 1
allele frequency: 8.510203734277399e-6
allele num: 117506
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-51C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-51C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.491C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-51C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-51C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.350C>T
  hgvsp: ENSP00000477100.1:p.Pro117Leu
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-51C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-51C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2149
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro117Leu
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS

19-18119475-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119475
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119475
    reference: chr 19
allele count: 1
allele frequency: 8.462384700008463e-6
allele num: 118170
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-45C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-45C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-45C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.497C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-45C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.356C>T
  hgvsp: ENSP00000477100.1:p.Thr119Ile
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-45C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-45C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2924
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1769
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr119Ile
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-18119486-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119486
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119486
    reference: chr 19
allele count: 1
allele frequency: 8.385181706887589e-6
allele num: 119258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-34C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.508C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-34C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-34C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-34C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-34C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.367C>A
  hgvsp: ENSP00000477100.1:p.Pro123Thr
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-34C>A
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36738
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3535
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39158
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2306
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro123Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

19-18119487-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119487
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119487
    reference: chr 19
allele count: 3
allele frequency: 2.514711059699241e-5
allele num: 119298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-33C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.509C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-33C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-33C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.368C>T
  hgvsp: ENSP00000477100.1:p.Pro123Leu
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-33C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-33C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-33C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3541
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39166
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7683
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Pro123Leu
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum

19-18119491-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119491
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119491
    reference: chr 19
allele count: 21
allele frequency: 1.754943089702663e-4
allele num: 119662
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-29C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.372C>T
  hgvsp: ENST00000593560.2:c.372C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-29C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-29C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-29C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.513C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-29C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-29C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13997
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39471
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3005
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1328
  bin: 9.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu124Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/19-18119495-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119495
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119495
    reference: chr 19
allele count: 2
allele frequency: 1.668502018887443e-5
allele num: 119868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-25C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.376C>A
  hgvsp: ENSP00000477100.1:p.Arg126Ser
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-25C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-25C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-25C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.517C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-25C>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-25C>A
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg126Ser
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

19-18119496-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119496
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119496
    reference: chr 19
allele count: 2
allele frequency: 1.6679454248257e-5
allele num: 119908
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-24G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-24G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-24G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-24G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.518G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-24G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.377G>A
  hgvsp: ENSP00000477100.1:p.Arg126His
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-24G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3016
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39740
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg126His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

19-18119496-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119496
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119496
    reference: chr 19
allele count: 1
allele frequency: 8.339727124128499e-6
allele num: 119908
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.377G>C
  hgvsp: ENSP00000477100.1:p.Arg126Pro
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-24G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.518G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-24G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-24G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-24G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-24G>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-24G>C
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7774
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg126Pro
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ

19-18119496-GCCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119496
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119493
    reference: chr 19
allele count: 1
allele frequency: 8.339727124128499e-6
allele num: 119908
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-20_416-18delCCT
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-20_191-18delCCT
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.381_383delCCT
  hgvsp: ENSP00000477100.1:p.Leu128del
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-20_386-18delCCT
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-20_275-18delCCT
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-20_-407-18delCCT
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-20_260-18delCCT
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.522_524delCCT
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7774
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu128del
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: GCCT
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum

19-18119497-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119497
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119497
    reference: chr 19
allele count: 1
allele frequency: 8.335973058135075e-6
allele num: 119962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-23C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-23C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-23C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-23C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-23C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.378C>T
  hgvsp: ENST00000593560.2:c.378C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.519C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-23C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37046
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14121
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3018
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3554
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg126Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

19-18119498-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119498
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119498
    reference: chr 19
allele count: 2
allele frequency: 1.666472244904761e-5
allele num: 120014
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-22C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-22C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-22C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.379C>T
  hgvsp: ENSP00000477100.1:p.Leu127Phe
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.520C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-22C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-22C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-22C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3555
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3016
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu127Phe
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-18119508-TCCTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119508
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119504
    reference: chr 19
allele count: 1
allele frequency: 8.313519445321983e-6
allele num: 120286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-8_-407-5delACCT
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-8_416-5delACCT
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-8_386-5delACCT
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-8_260-5delACCT
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.393_396delACCT
  hgvsp: ENSP00000477100.1:p.Pro132GlnfsTer27
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-8_275-5delACCT
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-8_191-5delACCT
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.534_537delACCT
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6095
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro132GlnfsTer27
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: TCCTA
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

19-18119510-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119510
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119510
    reference: chr 19
allele count: 1
allele frequency: 8.310203267571925e-6
allele num: 120334
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-10C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.532C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-10C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-10C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-10C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-10C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.391C>T
  hgvsp: ENST00000593560.2:c.391C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-10C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Leu131Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

19-18119512-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119512
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119512
    reference: chr 19
allele count: 14
allele frequency: 1.163119153249256e-4
allele num: 120366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-8A>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-8A>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-8A>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-8A>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-8A>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-8A>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.393A>G
  hgvsp: ENST00000593560.2:c.393A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.534A>G
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3020
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2320
  bin: 8.25e1
  variant carriers: 0
hgvs: c.275-8A>G
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

19-18119513-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119513
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119513
    reference: chr 19
allele count: 1
allele frequency: 8.305371914554334e-6
allele num: 120404
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-7C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-7C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-7C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-7C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.535C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.394C>T
  hgvsp: ENSP00000477100.1:p.Pro132Ser
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-7C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-7C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro132Ser
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

19-18119514-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119514
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119514
    reference: chr 19
allele count: 1
allele frequency: 8.303303053954863e-6
allele num: 120434
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-6C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-6C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-6C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-6C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.395C>T
  hgvsp: ENSP00000477100.1:p.Pro132Leu
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-6C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-6C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.536C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3574
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro132Leu
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

19-18119516-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119516
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119516
    reference: chr 19
allele count: 2
allele frequency: 1.660329741486659e-5
allele num: 120458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.538G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.397G>A
  hgvsp: ENSP00000477100.1:p.Ala133Thr
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-4G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-4G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-4G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-4G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-4G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-4G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala133Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS

19-18119516-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119516
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119516
    reference: chr 19
allele count: 1
allele frequency: 8.301648707433296e-6
allele num: 120458
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.416-4G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.191-4G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.275-4G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.260-4G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.386-4G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.397G>T
  hgvsp: ENSP00000477100.1:p.Ala133Ser
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.538G>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-407-4G>T
  variant of: http://identifiers.org/hgnc/25225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala133Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

19-18119521-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119521
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119521
    reference: chr 19
allele count: 2
allele frequency: 1.659035105182826e-5
allele num: 120552
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.261T>C
  hgvsp: ENST00000379656.3:c.261T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.192T>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.543T>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.402T>C
  hgvsp: ENST00000593560.2:c.402T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.276T>C
  hgvsp: ENST00000222250.4:c.276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.387T>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.417T>C
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-406T>C
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3574
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2324
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: c.276T>C
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

19-18119524-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119524
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119525
    reference: chr 19
allele count: 6
allele frequency: 4.976279733271406e-5
allele num: 120572
alternate allele: CG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.424dupG
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.199dupG
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.409dupG
  hgvsp: ENSP00000477100.1:p.Glu137GlyfsTer11
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.394dupG
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.283dupG
  hgvsp: ENSP00000222250.3:p.Glu95GlyfsTer11
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.550dupG
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.268dupG
  hgvsp: ENSP00000368977.1:p.Glu90GlyfsTer11
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-399dupG
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu95GlyfsTer11
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP

19-18119524-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119524
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119524
    reference: chr 19
allele count: 1
allele frequency: 8.293799555452344e-6
allele num: 120572
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-403C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.405C>G
  hgvsp: ENST00000593560.2:c.405C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.420C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.279C>G
  hgvsp: ENST00000222250.4:c.279C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.546C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.390C>G
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.264C>G
  hgvsp: ENST00000379656.3:c.264C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.195C>G
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3574
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7840
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr93Thr
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

19-18119524-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119524
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119524
    reference: chr 19
allele count: 4
allele frequency: 3.317519822180938e-5
allele num: 120572
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.264C>T
  hgvsp: ENST00000379656.3:c.264C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.279C>T
  hgvsp: ENST00000222250.4:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.405C>T
  hgvsp: ENST00000593560.2:c.405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-403C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.546C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.195C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.420C>T
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.390C>T
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3574
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr93Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

19-18119525-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18119525
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18119525
    reference: chr 19
allele count: 1
allele frequency: 8.294212298657997e-6
allele num: 120566
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000368977
  ensembl transcript: ENST00000379656
  gene symbol: ARRDC2
  hgvsc: ENST00000379656.3:c.265G>A
  hgvsp: ENSP00000368977.1:p.Gly89Arg
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000596105
  gene symbol: ARRDC2
  hgvsc: ENST00000596105.2:n.421G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000593460
  gene symbol: ARRDC2
  hgvsc: ENST00000593460.1:n.547G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000476804
  ensembl transcript: ENST00000595712
  gene symbol: ARRDC2
  hgvsc: ENST00000595712.1:c.-402G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000222250
  ensembl transcript: ENST00000222250
  gene symbol: ARRDC2
  hgvsc: ENST00000222250.4:c.280G>A
  hgvsp: ENSP00000222250.3:p.Gly94Arg
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105643
  ensembl protein: ENSP00000477100
  ensembl transcript: ENST00000593560
  gene symbol: ARRDC2
  hgvsc: ENST00000593560.2:c.406G>A
  hgvsp: ENSP00000477100.1:p.Gly136Arg
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000608009
  gene symbol: ARRDC2
  hgvsc: ENST00000608009.1:n.196G>A
  variant of: http://identifiers.org/hgnc/25225
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105643
  ensembl transcript: ENST00000600788
  gene symbol: ARRDC2
  hgvsc: ENST00000600788.2:n.391G>A
  variant of: http://identifiers.org/hgnc/25225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly94Arg
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 386
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3053
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4290
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25233
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.021590587474225e-5
allele num: 49466
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9016
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 634
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.399e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.506e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.23e-1

FS
type: SiteQuality
SIO_000300: 1.448e0

DP
type: SiteQuality
SIO_000300: 1.010909e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
all individuals: 2550
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6064
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47806
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.019514249613927e-5
allele num: 14246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4270
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8696
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.118e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.22e-1

DP
type: SiteQuality
SIO_000300: 9.40726e5

VQSLOD
type: SiteQuality
SIO_000300: 5.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.33e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

QD
type: SiteQuality
SIO_000300: 1.39e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.89e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5600
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.501876407305479e-4
allele num: 7994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45118
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

DP
type: SiteQuality
SIO_000300: 8.48655e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.61e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -9.916e-1

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.7e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-2

FS
type: SiteQuality
SIO_000300: 4.037e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.609781957313419e-5
allele num: 43386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5962
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5374
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.295e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.041e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.91e-2

DP
type: SiteQuality
SIO_000300: 8.13478e5

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 5.833e1

FS
type: SiteQuality
SIO_000300: 2.285e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 5026
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41304
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13342
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7016
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.19e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.87e0

QD
type: SiteQuality
SIO_000300: 9.699999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.307e0

DP
type: SiteQuality
SIO_000300: 7.71404e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4918
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.464146666009561e-5
allele num: 40582
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.636e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.32e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.496e-1

QD
type: SiteQuality
SIO_000300: 1.704e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.29e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 7.56142e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.76678445229682e-4
allele num: 5660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 34990
num of homozygotes: 0

FS
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e-1

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -3.17e-2

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2596
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1394
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 306
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Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

VQSLOD
type: SiteQuality
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FS
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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QD
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1930
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1164
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 6.273525721455458e-5
allele num: 15940
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.22e0

FS
type: SiteQuality
SIO_000300: 1.803e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.74e-2

MQ
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.62e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 8.999280057595392e-5
allele num: 11112
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1480
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1080
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
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VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -6.54e-2

FS
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QD
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 1.121076233183856e-2
allele num: 446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.42e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.422e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

FS
type: SiteQuality
SIO_000300: 9.11e-1

QD
type: SiteQuality
SIO_000300: 1.517e1

DP
type: SiteQuality
SIO_000300: 3.50657e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.83e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.932e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.11e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.40674e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

MQRankSum
type: SiteQuality
SIO_000300: -3.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.663e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 2381
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7812
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.646361540994402e-4
allele num: 6074
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.26e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.43e0

FS
type: SiteQuality
SIO_000300: 6.593e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

DP
type: SiteQuality
SIO_000300: 3.35396e5

VQSLOD
type: SiteQuality
SIO_000300: -1.861e0

GenotypeQuality
all individuals: 1710
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2667
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variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 990
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 256
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.317175974710221e-4
allele num: 7592
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.099999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.941e1

FS
type: SiteQuality
SIO_000300: 1.9656e1

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

DP
type: SiteQuality
SIO_000300: 3.27349e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

QD
type: SiteQuality
SIO_000300: 1.037e1

VQSLOD
type: SiteQuality
SIO_000300: -1.648e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.881e0

GenotypeQuality
all individuals: 6832
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 3.25e1
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GenotypeQuality
all individuals: 237
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GenotypeQuality
all individuals: 2700
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 976
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.13e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.3e1

VQSLOD
type: SiteQuality
SIO_000300: -1.559e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.27165e5

GenotypeQuality
all individuals: 77
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
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variant carriers: 0

GenotypeQuality
all individuals: 2180
bin: 2.5e0
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GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
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variant carriers: 1

GenotypeQuality
all individuals: 2322
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 455
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 335
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 4.098360655737705e-3
allele num: 244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.08997955010225e-4
allele num: 4890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 992
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 322
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.224e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-2

FS
type: SiteQuality
SIO_000300: 2.857e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.59488e5

VQSLOD
type: SiteQuality
SIO_000300: 4.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 239
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 452
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4992
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 7.822685788787483e-4
allele num: 7670
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1018
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.14e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

DP
type: SiteQuality
SIO_000300: 3.66032e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: -3.812e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

FS
type: SiteQuality
SIO_000300: 1.626e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.41e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-2

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 140
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5070
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1032
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

VQSLOD
type: SiteQuality
SIO_000300: -1.911e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.589e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.68331e5

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.279999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.354e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 301
bin: 7.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5104
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

DP
type: SiteQuality
SIO_000300: 3.74425e5

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.95e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.16e-2

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
all individuals: 629
bin: 2.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 234
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variant carriers: 1

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.758705592683785e-4
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num of homozygotes: 0

African
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num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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MQRankSum
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VQSLOD
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MQ
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DP
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QD
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FS
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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QD
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InbreedingCoeff
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FS
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 6442
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East Asian
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Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 8072
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DP
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FS
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ClippingRankSum
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QD
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MQ
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BaseQRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.507386192342478e-4
allele num: 6634
num of homozygotes: 0

South Asian
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allele frequency: 1.233045622688039e-4
allele num: 8110
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

DP
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

InbreedingCoeff
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FS
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 7.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-2

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.01e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 586
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.227897838899803e-4
allele num: 8144
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.392e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 1726
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.036914143508917e-4
allele num: 9644
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: 1.03e0

VQSLOD
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ClippingRankSum
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FS
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DP
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InbreedingCoeff
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1108
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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Other
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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FS
type: SiteQuality
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MQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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QD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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MQRankSum
type: SiteQuality
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FS
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BaseQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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QD
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DP
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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African
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Latino
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European (Finnish)
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East Asian
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South Asian
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VQSLOD
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InbreedingCoeff
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QD
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ClippingRankSum
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BaseQRankSum
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FS
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MQRankSum
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MQ
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.078204346942921e-5
allele num: 19692
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.69e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.78e-1

QD
type: SiteQuality
SIO_000300: 1.069e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.64982e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.65e-1

GenotypeQuality
all individuals: 2312
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1214
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4778
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1391
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 94
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 311
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1220
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 4.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1632
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 1.243781094527363e-3
allele num: 2412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

South Asian
type: Population
allele count: 23
allele frequency: 2.143522833178005e-3
allele num: 10730
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 32
allele frequency: 1.404494382022472e-3
allele num: 22784
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.733e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

QD
type: SiteQuality
SIO_000300: 1.325e1

MQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.12e-2

DP
type: SiteQuality
SIO_000300: 7.02291e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

GenotypeQuality
all individuals: 397
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30584
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3830
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1467
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10715
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1654
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 2.583979328165374e-4
allele num: 3870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2020
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.654397451778446e-4
allele num: 11302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3050
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.353e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.629e0

DP
type: SiteQuality
SIO_000300: 7.50638e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

FS
type: SiteQuality
SIO_000300: 4.608e0

GenotypeQuality
all individuals: 1386
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 612
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 9.75e1
variant carriers: 54

GenotypeQuality
all individuals: 3668
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2560
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 429
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2380
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1695
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 7.59988419224088e-4
allele num: 27632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2980
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 33
allele frequency: 1.543498596819457e-2
allele num: 2138
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4000
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.78e0

FS
type: SiteQuality
SIO_000300: 8.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e-1

QD
type: SiteQuality
SIO_000300: 1.38e1

DP
type: SiteQuality
SIO_000300: 7.62606e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

GenotypeQuality
all individuals: 630
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27711
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13729
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1685
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 291
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1152
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 9.75e1
variant carriers: 52

GenotypeQuality
all individuals: 2611
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 2.173913043478261e-3
allele num: 460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 48
allele frequency: 1.504607861576077e-3
allele num: 31902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4512
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 4.15973377703827e-4
allele num: 12020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3942
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3554
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.015e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

DP
type: SiteQuality
SIO_000300: 8.18198e5

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.61e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.86e-1

QD
type: SiteQuality
SIO_000300: 1.429e1

GenotypeQuality
all individuals: 538
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1820
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2846
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2380
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2670
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4646
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.269930532583527e-5
allele num: 12092
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4040
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32594
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.374e1

VQSLOD
type: SiteQuality
SIO_000300: 1.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.78e-1

DP
type: SiteQuality
SIO_000300: 8.2698e5

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 14527
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2672
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1085
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1819
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26892
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.234519104084322e-5
allele num: 12144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3772
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33230
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2638
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.94e-1

QD
type: SiteQuality
SIO_000300: 9.59e0

FS
type: SiteQuality
SIO_000300: 2.73e0

DP
type: SiteQuality
SIO_000300: 8.37981e5

VQSLOD
type: SiteQuality
SIO_000300: 5.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.093e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 554
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1071
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2647
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1833
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2609
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26247
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.902252147666589e-5
allele num: 34456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3912
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4918
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12314
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

QD
type: SiteQuality
SIO_000300: 1.714e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

DP
type: SiteQuality
SIO_000300: 8.56492e5

ClippingRankSum
type: SiteQuality
SIO_000300: -9.51e-1

GenotypeQuality
all individuals: 18789
bin: 2.25e1
variant carriers: 134

GenotypeQuality
all individuals: 1848
bin: 2.75e1
variant carriers: 93

GenotypeQuality
all individuals: 1413
bin: 3.75e1
variant carriers: 123

GenotypeQuality
all individuals: 431
bin: 8.25e1
variant carriers: 213

GenotypeQuality
all individuals: 567
bin: 1.25e1
variant carriers: 80

GenotypeQuality
all individuals: 843
bin: 5.25e1
variant carriers: 201

GenotypeQuality
all individuals: 1620
bin: 6.75e1
variant carriers: 207

GenotypeQuality
all individuals: 13211
bin: 9.75e1
variant carriers: 13117

GenotypeQuality
all individuals: 512
bin: 5.75e1
variant carriers: 143

GenotypeQuality
all individuals: 11979
bin: 6.25e1
variant carriers: 194

GenotypeQuality
all individuals: 277
bin: 8.75e1
variant carriers: 200

GenotypeQuality
all individuals: 672
bin: 4.25e1
variant carriers: 99

GenotypeQuality
all individuals: 569
bin: 7.25e1
variant carriers: 143

European (Non-Finnish)
type: Population
allele count: 8999
allele frequency: 2.167911346663454e-1
allele num: 41510
num of homozygotes: 663

European (Finnish)
type: Population
allele count: 924
allele frequency: 2.578125e-1
allele num: 3584
num of homozygotes: 77

South Asian
type: Population
allele count: 2187
allele frequency: 1.657069252917109e-1
allele num: 13198
num of homozygotes: 167

East Asian
type: Population
allele count: 908
allele frequency: 1.89324437030859e-1
allele num: 4796
num of homozygotes: 54

Other
type: Population
allele count: 118
allele frequency: 2.153284671532847e-1
allele num: 548
num of homozygotes: 11

African
type: Population
allele count: 1634
allele frequency: 2.600254614894971e-1
allele num: 6284
num of homozygotes: 160

Latino
type: Population
allele count: 732
allele frequency: 1.387414708112206e-1
allele num: 5276
num of homozygotes: 23

VQSLOD
type: SiteQuality
SIO_000300: 5.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-2

QD
type: SiteQuality
SIO_000300: 1.601e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e-1

DP
type: SiteQuality
SIO_000300: 9.49149e5

GenotypeQuality
all individuals: 674
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9952
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1900
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30574
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5143
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 414
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5092
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9522
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.659563132658497e-5
allele num: 15016
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56026
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.761e0

VQSLOD
type: SiteQuality
SIO_000300: -4.699e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

DP
type: SiteQuality
SIO_000300: 1.21284e6

QD
type: SiteQuality
SIO_000300: 1.232e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1234
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30574
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1900
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 578
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.784885588833756e-5
allele num: 56026
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5092
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.21284e6

VQSLOD
type: SiteQuality
SIO_000300: -4.699e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

FS
type: SiteQuality
SIO_000300: 1.761e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e0

QD
type: SiteQuality
SIO_000300: 1.232e1

GenotypeQuality
all individuals: 535
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2328
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.966439433665443e-4
allele num: 15256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.471257983893363e-5
allele num: 57616
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.655e0

QD
type: SiteQuality
SIO_000300: 1.311e1

DP
type: SiteQuality
SIO_000300: 1.254822e6

FS
type: SiteQuality
SIO_000300: 2.188e0

VQSLOD
type: SiteQuality
SIO_000300: 2.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 507
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 68
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 539
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variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32559
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GenotypeQuality
all individuals: 2100
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variant carriers: 0

GenotypeQuality
all individuals: 7585
bin: 2.25e1
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GenotypeQuality
all individuals: 756
bin: 9.75e1
variant carriers: 98

GenotypeQuality
all individuals: 1405
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
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variant carriers: 0

GenotypeQuality
all individuals: 2478
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.416350654231151e-5
allele num: 58542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15390
num of homozygotes: 0

African
type: Population
allele count: 96
allele frequency: 1.096140671386161e-2
allele num: 8758
num of homozygotes: 1

Other
type: Population
allele count: 1
allele frequency: 1.282051282051282e-3
allele num: 780
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5426
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.920560747663551e-4
allele num: 10272
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

FS
type: SiteQuality
SIO_000300: 2.423e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-2

DP
type: SiteQuality
SIO_000300: 1.282128e6

QD
type: SiteQuality
SIO_000300: 1.516e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.01e-1

GenotypeQuality
all individuals: 479
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 675
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variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
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GenotypeQuality
all individuals: 5925
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
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GenotypeQuality
all individuals: 2158
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1570
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.396162336559688e-5
allele num: 58890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8824
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7526
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.346e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.291153e6

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

QD
type: SiteQuality
SIO_000300: 1.584e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e0

GenotypeQuality
all individuals: 425
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
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variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
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variant carriers: 1

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
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variant carriers: 0

GenotypeQuality
all individuals: 256
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GenotypeQuality
all individuals: 2961
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variant carriers: 0

GenotypeQuality
all individuals: 1895
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variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61500
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.299609424215698e-5
allele num: 15874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5836
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10956
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.137e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

QD
type: SiteQuality
SIO_000300: 1.202e1

MQRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.359159e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e0

GenotypeQuality
all individuals: 693
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6938
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
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variant carriers: 0

GenotypeQuality
all individuals: 798
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variant carriers: 0

GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
all individuals: 292
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GenotypeQuality
all individuals: 3131
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 825
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 600
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35753
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variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2626
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11112
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 6.226650062266501e-4
allele num: 8030
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15956
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5938
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.688e0

VQSLOD
type: SiteQuality
SIO_000300: -7.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

QD
type: SiteQuality
SIO_000300: 1.268e1

FS
type: SiteQuality
SIO_000300: 1.2787e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e-2

DP
type: SiteQuality
SIO_000300: 1.381983e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeQuality
all individuals: 228
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 825
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2055
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6938
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2626
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3131
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62344
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.04887770086008e-4
allele num: 9534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15956
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8030
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5938
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.381983e6

VQSLOD
type: SiteQuality
SIO_000300: -7.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

FS
type: SiteQuality
SIO_000300: 1.2787e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.688e0

QD
type: SiteQuality
SIO_000300: 1.268e1

GenotypeQuality
all individuals: 749
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
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GenotypeQuality
all individuals: 203
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variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 5.25e1
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GenotypeQuality
all individuals: 35900
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GenotypeQuality
all individuals: 3209
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variant carriers: 0

GenotypeQuality
all individuals: 48
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GenotypeQuality
all individuals: 714
bin: 8.75e1
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GenotypeQuality
all individuals: 7071
bin: 6.75e1
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GenotypeQuality
all individuals: 2685
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2096
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5988
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.239081607187422e-5
allele num: 16028
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

QD
type: SiteQuality
SIO_000300: 1.033e1

MQRankSum
type: SiteQuality
SIO_000300: 2.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.625e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.03e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

DP
type: SiteQuality
SIO_000300: 1.393457e6

GenotypeQuality
all individuals: 7090
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 292
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
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GenotypeQuality
all individuals: 2725
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 742
bin: 9.25e1
variant carriers: 7

GenotypeQuality
all individuals: 223
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 623
bin: 2.75e1
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GenotypeQuality
all individuals: 166
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 247
bin: 5.75e1
variant carriers: 1

African
type: Population
allele count: 802
allele frequency: 8.17866612278197e-2
allele num: 9806
num of homozygotes: 32

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6070
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.86219739292365e-4
allele num: 16110
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8220
num of homozygotes: 0

Other
type: Population
allele count: 8
allele frequency: 9.456264775413711e-3
allele num: 846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 32
allele frequency: 5.048752011612129e-4
allele num: 63382
num of homozygotes: 0

Latino
type: Population
allele count: 142
allele frequency: 1.25508219904543e-2
allele num: 11314
num of homozygotes: 2

DP
type: SiteQuality
SIO_000300: 1.425572e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.522e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

GenotypeQuality
all individuals: 1263
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2784
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 4.25e1
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GenotypeQuality
all individuals: 773
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7255
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2798
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.570302440249992e-5
allele num: 63682
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.609e1

MQ
type: SiteQuality
SIO_000300: 5.938e1

VQSLOD
type: SiteQuality
SIO_000300: 9.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.41e-1

DP
type: SiteQuality
SIO_000300: 1.430451e6

GenotypeQuality
all individuals: 443
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37613
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2231
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2880
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.002204850671477e-4
allele num: 9978
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6266
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.03e-1

DP
type: SiteQuality
SIO_000300: 1.448072e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.092e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
SIO_000300: 7.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

QD
type: SiteQuality
SIO_000300: 1.355e1

FS
type: SiteQuality
SIO_000300: 3.189e0

GenotypeQuality
all individuals: 1286
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 200
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7516
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3490
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variant carriers: 0

GenotypeQuality
all individuals: 2267
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variant carriers: 0

GenotypeQuality
all individuals: 165
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variant carriers: 0

GenotypeQuality
all individuals: 341
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variant carriers: 0

GenotypeQuality
all individuals: 249
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544687818591863e-5
allele num: 64738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.63e-1

QD
type: SiteQuality
SIO_000300: 1.015e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

FS
type: SiteQuality
SIO_000300: 2.465e0

VQSLOD
type: SiteQuality
SIO_000300: 5.18e-1

DP
type: SiteQuality
SIO_000300: 1.459825e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.929e0

GenotypeQuality
all individuals: 56
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1310
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variant carriers: 1

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 2983
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variant carriers: 0

GenotypeQuality
all individuals: 131
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variant carriers: 0

GenotypeQuality
all individuals: 1169
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variant carriers: 0

GenotypeQuality
all individuals: 7679
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variant carriers: 0

GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531252871099133e-5
allele num: 65306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.329e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.404e0

VQSLOD
type: SiteQuality
SIO_000300: 7.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.85e-1

QD
type: SiteQuality
SIO_000300: 1.141e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.419999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

DP
type: SiteQuality
SIO_000300: 1.477514e6

GenotypeQuality
all individuals: 1120
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 2993
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 2307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.592352202798273e-5
allele num: 65326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.96e-1

QD
type: SiteQuality
SIO_000300: 1.45e1

MQ
type: SiteQuality
SIO_000300: 5.945e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.8e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

FS
type: SiteQuality
SIO_000300: 5.22e-1

DP
type: SiteQuality
SIO_000300: 1.478897e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.89e-1

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 933
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 2309
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GenotypeQuality
all individuals: 7744
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GenotypeQuality
all individuals: 830
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variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 71
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variant carriers: 0

GenotypeQuality
all individuals: 56
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variant carriers: 0

GenotypeQuality
all individuals: 3549
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.686587908269631e-5
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.578894349644372e-5
allele num: 65518
num of homozygotes: 0

African
type: Population
allele count: 17
allele frequency: 1.65983206404999e-3
allele num: 10242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.6e-2

QD
type: SiteQuality
SIO_000300: 1.337e1

VQSLOD
type: SiteQuality
SIO_000300: 4.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.208e0

DP
type: SiteQuality
SIO_000300: 1.484311e6

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3014
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7769
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variant carriers: 0

GenotypeQuality
all individuals: 30
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 833
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variant carriers: 0

GenotypeQuality
all individuals: 813
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variant carriers: 0

GenotypeQuality
all individuals: 2313
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3558
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.047758373716132e-5
allele num: 65622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.364e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.617e0

FS
type: SiteQuality
SIO_000300: 1.119e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

MQRankSum
type: SiteQuality
SIO_000300: 9.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.487077e6

GenotypeQuality
all individuals: 786
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 120
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GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 3551
bin: 7.75e1
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GenotypeQuality
all individuals: 1322
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 820
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variant carriers: 0

GenotypeQuality
all individuals: 2315
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.078288353999514e-5
allele num: 16452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166861143523921e-4
allele num: 8570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.083e0

VQSLOD
type: SiteQuality
SIO_000300: 4.48e0

DP
type: SiteQuality
SIO_000300: 1.487954e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

QD
type: SiteQuality
SIO_000300: 1.251e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e0

GenotypeQuality
all individuals: 1322
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 820
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GenotypeQuality
all individuals: 59
bin: 5.25e1
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GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39740
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 3551
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2315
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3016
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523229246001523e-5
allele num: 65650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

QD
type: SiteQuality
SIO_000300: 1.251e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.083e0

DP
type: SiteQuality
SIO_000300: 1.487954e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3551
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1322
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 835
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39740
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3016
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523229246001523e-5
allele num: 65650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.083e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

DP
type: SiteQuality
SIO_000300: 1.487954e6

VQSLOD
type: SiteQuality
SIO_000300: 4.48e0

QD
type: SiteQuality
SIO_000300: 1.251e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39787
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7781
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522394421946838e-5
allele num: 65686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.04e-2

FS
type: SiteQuality
SIO_000300: 2.901e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.391e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.66e0

DP
type: SiteQuality
SIO_000300: 1.488435e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: 6.27e-1

QD
type: SiteQuality
SIO_000300: 1.095e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39791
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7786
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.043584124665206e-5
allele num: 65712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.28e-1

FS
type: SiteQuality
SIO_000300: 6.71e0

DP
type: SiteQuality
SIO_000300: 1.489193e6

MQRankSum
type: SiteQuality
SIO_000300: -2.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.889e0

QD
type: SiteQuality
SIO_000300: 1.332e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 5.976e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.28e-1

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7811
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40031
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 824
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3025
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3565
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variant carriers: 0

GenotypeQuality
all individuals: 1323
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2321
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16333178222429e-4
allele num: 8596
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.53e-1

MQ
type: SiteQuality
SIO_000300: 5.746e1

DP
type: SiteQuality
SIO_000300: 1.492705e6

MQRankSum
type: SiteQuality
SIO_000300: -3.14e-1

FS
type: SiteQuality
SIO_000300: 1.421e0

QD
type: SiteQuality
SIO_000300: 1.19e1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

GenotypeQuality
all individuals: 573
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2320
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 3568
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40077
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3026
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7810
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.892e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.019e0

MQRankSum
type: SiteQuality
SIO_000300: -1.062e0

FS
type: SiteQuality
SIO_000300: 2.991e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.974e-1

DP
type: SiteQuality
SIO_000300: 1.493326e6

QD
type: SiteQuality
SIO_000300: 1.456e1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39986
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
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variant carriers: 0

GenotypeQuality
all individuals: 7816
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variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3566
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variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 825
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.164370269745779e-3
allele num: 10306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516760200212346e-5
allele num: 65930
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.494725e6

QD
type: SiteQuality
SIO_000300: 1.336e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e0

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 5.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.09e-1

GenotypeQuality
all individuals: 3572
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 825
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variant carriers: 0

GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7834
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40059
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.981e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.52e-1

DP
type: SiteQuality
SIO_000300: 1.494289e6

MQRankSum
type: SiteQuality
SIO_000300: -4.12e-1

FS
type: SiteQuality
SIO_000300: 4.749e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

QD
type: SiteQuality
SIO_000300: 1.22e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

GenotypeQuality
all individuals: 40076
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2323
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variant carriers: 0

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 7841
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variant carriers: 0

GenotypeQuality
all individuals: 540
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 1328
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3024
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65974
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.49459e6

VQSLOD
type: SiteQuality
SIO_000300: 5.11e-1

QD
type: SiteQuality
SIO_000300: 9.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3574
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7840
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 841
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variant carriers: 0

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 40095
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 2325
bin: 8.25e1
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GenotypeQuality
all individuals: 826
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3024
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.937984496124031e-4
allele num: 10320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.084e0

MQ
type: SiteQuality
SIO_000300: 5.926e1

QD
type: SiteQuality
SIO_000300: 1.134e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.159999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.49499e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.186e0

FS
type: SiteQuality
SIO_000300: 7.576e0

GenotypeQuality
all individuals: 3574
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2325
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40095
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3024
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515289268721399e-5
allele num: 65994
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.186e0

FS
type: SiteQuality
SIO_000300: 7.576e0

QD
type: SiteQuality
SIO_000300: 1.134e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.084e0

DP
type: SiteQuality
SIO_000300: 1.49499e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.159999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.926e1

GenotypeQuality
all individuals: 3028
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7852
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.936483346243222e-4
allele num: 10328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66056
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.97e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.245e0

DP
type: SiteQuality
SIO_000300: 1.495952e6

VQSLOD
type: SiteQuality
SIO_000300: 3.5e-3

FS
type: SiteQuality
SIO_000300: 4.634e0

MQRankSum
type: SiteQuality
SIO_000300: -1.134e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

QD
type: SiteQuality
SIO_000300: 1.074e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

GenotypeQuality
all individuals: 3574
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3031
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1341
bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7840
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40143
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.567731194187983e-5
allele num: 66070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

FS
type: SiteQuality
SIO_000300: 4.373e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

QD
type: SiteQuality
SIO_000300: 1.041e1

DP
type: SiteQuality
SIO_000300: 1.497204e6

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3031
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66070
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.373e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 1.041e1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

DP
type: SiteQuality
SIO_000300: 1.497204e6

GenotypeQuality
all individuals: 840
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7840
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1341
bin: 9.75e1
variant carriers: 4

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513546238837597e-5
allele num: 66070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.682416731216112e-5
allele num: 10328
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.321262766945218e-4
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.041e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 5.931e1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

FS
type: SiteQuality
SIO_000300: 4.373e0

DP
type: SiteQuality
SIO_000300: 1.497204e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1