X-18198803-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018198803
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018198803
    reference: chr 0
allele count: 3
allele frequency: 4.066307927945023e-5
allele num: 73777
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1289-33T>C
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.1016-33T>C
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5478
  num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

X-18209076-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209076
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018209076
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 80864
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.1015+45A>G
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1288+45A>G
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4477
  num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

X-18209092-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209092
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018209092
    reference: chr 0
allele count: 1
allele frequency: 1.224979787833501e-5
allele num: 81634
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.1015+29T>C
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1288+29T>C
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
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  allele frequency: 0.0e0
  allele num: 45755
  num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

X-18209093-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209093
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018209093
    reference: chr 0
allele count: 2
allele frequency: 2.449299500342902e-5
allele num: 81656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.1015+28G>T
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1288+28G>T
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 947
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
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  allele num: 9094
  num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

X-18209099-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209099
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018209099
    reference: chr 0
allele count: 4
allele frequency: 4.852896572641796e-5
allele num: 82425
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.1015+22T>G
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1288+22T>G
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: Latino
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population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: A
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X-18209109-T-C
type: Variant
location: Region
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    type: ExactPosition
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    reference: chr 0
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    position: 24018209109
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allele count: 1
allele frequency: 1.197146003926639e-5
allele num: 83532
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
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  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.1015+12A>G
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1288+12A>G
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
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  allele num: 6576
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population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: T
site quality: MQ
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X-18209127-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209127
    reference: chr 0
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    type: ExactPosition
    position: 24018209127
    reference: chr 0
allele count: 1
allele frequency: 1.170617500731636e-5
allele num: 85425
alternate allele: T
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1282G>A
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
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  hgvsc: ENST00000380030.3:c.1009G>A
  hgvsp: ENSP00000369369.3:p.Asp337Asn
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
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site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
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X-18209128-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209128
    reference: chr 0
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    type: ExactPosition
    position: 24018209128
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allele count: 3
allele frequency: 3.502995060776964e-5
allele num: 85641
alternate allele: A
annotation: Annotation
  canonical: false
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  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.1008C>T
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1281C>T
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  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: synonymous
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hgvs: p.Pro427Pro
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population: African
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X-18209130-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209130
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018209130
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allele num: 85792
alternate allele: C
annotation: Annotation
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  gene symbol: BEND2
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  hgvsp: ENSP00000369369.3:p.Pro336Ala
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
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  ensembl protein: ENSP00000369372
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1279C>G
  hgvsp: ENSP00000369372.4:p.Pro427Ala
  variant of: http://identifiers.org/hgnc/28509
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genotype quality: GenotypeQuality
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hgvs: p.Pro427Ala
num of homozygotes: 0
population: African
  type: Population
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  allele frequency: 0.0e0
  allele num: 8478
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population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: QD
site quality: FS
site quality: MQ
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site quality: DP
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X-18209146-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209146
    reference: chr 0
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    type: ExactPosition
    position: 24018209146
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allele count: 1
allele frequency: 1.153868343621993e-5
allele num: 86665
alternate allele: C
annotation: Annotation
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  consequence: synonymous_variant
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  ensembl protein: ENSP00000369372
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  gene symbol: BEND2
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
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  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.990A>G
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  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ala421Ala
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population: African
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population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
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site quality: VQSLOD
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X-18209155-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
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    type: ExactPosition
    position: 24018209155
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allele count: 1
allele frequency: 1.149491350077591e-5
allele num: 86995
alternate allele: T
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
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  variant of: http://identifiers.org/hgnc/28509
canonical: true
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population: African
population: Other
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population: East Asian
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site quality: InbreedingCoeff
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X-18209192-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
  end: Position
    type: ExactPosition
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allele count: 21
allele frequency: 2.412157272654177e-4
allele num: 87059
alternate allele: C
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000177324
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  variant of: http://identifiers.org/hgnc/28509
canonical: true
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X-18209197-C-T
type: Variant
location: Region
  begin: Position
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    reference: chr 0
  end: Position
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alternate allele: T
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
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genotype quality: GenotypeQuality
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hgvs: p.Met404Ile
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population: East Asian
  type: Population
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  allele frequency: 0.0e0
  allele num: 6633
  num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
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site quality: DP
site quality: ReadPosRankSum
site quality: MQ
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X-18209199-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209199
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018209199
    reference: chr 0
allele count: 1
allele frequency: 1.150218541522889e-5
allele num: 86940
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.937A>G
  hgvsp: ENSP00000369369.3:p.Met313Val
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1210A>G
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  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Met404Val
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population: European (Finnish)
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population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: FS
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site quality: QD
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X-18209212-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209212
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018209212
    reference: chr 0
allele count: 1
allele frequency: 1.155882284948101e-5
allele num: 86514
alternate allele: T
annotation: Annotation
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  hgvsc: ENST00000380030.3:c.924G>A
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
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  hgvsc: ENST00000380033.4:c.1197G>A
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  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Non-Finnish)
  type: Population
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  allele num: 47693
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population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
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site quality: ReadPosRankSum
site quality: DP
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X-18209214-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209214
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018209214
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allele count: 1
allele frequency: 1.156336725254394e-5
allele num: 86480
alternate allele: C
annotation: Annotation
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  consequence: missense_variant
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  ensembl protein: ENSP00000369369
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  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.922A>G
  hgvsp: ENSP00000369369.3:p.Met308Val
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
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  gene symbol: BEND2
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  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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hgvs: p.Met399Val
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population: European (Non-Finnish)
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population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
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reference allele: T
site quality: InbreedingCoeff
site quality: FS
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X-18209224-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209224
    reference: chr 0
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    type: ExactPosition
    position: 24018209224
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allele count: 1
allele frequency: 1.163264119118246e-5
allele num: 85965
alternate allele: C
annotation: Annotation
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  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.912T>G
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
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  variant of: http://identifiers.org/hgnc/28509
canonical: true
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site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

X-18209239-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209239
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018209239
    reference: chr 0
allele count: 1
allele frequency: 1.177066045175795e-5
allele num: 84957
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1181-11G>T
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-11G>T
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
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  allele frequency: 0.0e0
  allele num: 6607
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
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X-18209242-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209242
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018209242
    reference: chr 0
allele count: 1
allele frequency: 1.178911628784306e-5
allele num: 84824
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-14G>A
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1181-14G>A
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
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  allele num: 609
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP

X-18209250-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209250
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018209250
    reference: chr 0
allele count: 2
allele frequency: 2.368405471016638e-5
allele num: 84445
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1181-22A>G
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-22A>G
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
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site quality: DP
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X-18209251-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209251
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018209251
    reference: chr 0
allele count: 1
allele frequency: 1.185424026174163e-5
allele num: 84358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-23T>C
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1181-23T>C
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  allele num: 4508
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population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
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site quality: DP
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site quality: QD
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X-18209252-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209252
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018209252
    reference: chr 0
allele count: 2
allele frequency: 2.372648112558426e-5
allele num: 84294
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-24A>G
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1181-24A>G
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  allele num: 7998
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population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
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site quality: FS
site quality: DP
site quality: MQ
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X-18209253-G-A
type: Variant
location: Region
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allele count: 1
allele frequency: 1.186535198566665e-5
allele num: 84279
alternate allele: A
annotation: Annotation
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  gene symbol: BEND2
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000177324
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1181-25C>T
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: South Asian
population: Other
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X-18209258-AC-A
type: Variant
location: Region
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    reference: chr 0
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allele count: 1
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allele num: 84013
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annotation: Annotation
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
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  ensembl gene: ENSG00000177324
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  variant of: http://identifiers.org/hgnc/28509
canonical: true
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population: Latino
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X-18209265-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209265
    reference: chr 0
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allele num: 83497
alternate allele: T
annotation: Annotation
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  gene symbol: BEND2
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
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  ensembl gene: ENSG00000177324
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  variant of: http://identifiers.org/hgnc/28509
canonical: true
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X-18209269-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018209269
    reference: chr 0
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allele count: 2
allele frequency: 2.402171563093036e-5
allele num: 83258
alternate allele: C
annotation: Annotation
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  ensembl protein: ENSP00000369369
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  gene symbol: BEND2
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
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  gene symbol: BEND2
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  variant of: http://identifiers.org/hgnc/28509
canonical: true
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X-18209271-C-T
type: Variant
location: Region
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annotation: Annotation
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annotation: Annotation
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canonical: true
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X-18209277-G-T
type: Variant
location: Region
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X-18209278-A-C
type: Variant
location: Region
  begin: Position
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X-18213372-C-T
type: Variant
location: Region
  begin: Position
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6580
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
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site quality: DP
site quality: MQ

X-18213376-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213376
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213376
    reference: chr 0
allele count: 3
allele frequency: 3.583629978259311e-5
allele num: 83714
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1180+40T>C
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4148T>C
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
  type: Population
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  allele num: 594
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population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

X-18213382-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213382
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213382
    reference: chr 0
allele count: 272
allele frequency: 3.245939592109503e-3
allele num: 83797
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1180+34C>T
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4154C>T
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 15
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 3
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4515
  num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

X-18213384-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213384
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213384
    reference: chr 0
allele count: 2
allele frequency: 2.386606365079176e-5
allele num: 83801
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1180+32G>T
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4156G>T
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 691
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
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  allele num: 9252
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

X-18213384-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213384
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213384
    reference: chr 0
allele count: 1
allele frequency: 1.193303182539588e-5
allele num: 83801
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1180+32G>A
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4156G>A
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17423
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genotype depth: GenotypeDepth
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population: Latino
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population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
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site quality: DP

X-18213400-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213400
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213400
    reference: chr 0
allele count: 1
allele frequency: 1.183515989301015e-5
allele num: 84494
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4172T>C
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1180+16T>C
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canonical: true
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num of homozygotes: 0
population: South Asian
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population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: QD
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X-18213421-T-C
type: Variant
location: Region
  begin: Position
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    position: 24018213421
    reference: chr 0
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    type: ExactPosition
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    reference: chr 0
allele count: 1
allele frequency: 1.166588894073728e-5
allele num: 85720
alternate allele: C
annotation: Annotation
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  ensembl protein: ENSP00000369369
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  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4193A>G
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1175A>G
  hgvsp: ENSP00000369372.4:p.Asn392Ser
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: African
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population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
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X-18213434-G-T
type: Variant
location: Region
  begin: Position
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    position: 24018213434
    reference: chr 0
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    type: ExactPosition
    position: 24018213434
    reference: chr 0
allele count: 4
allele frequency: 4.622140050843541e-5
allele num: 86540
alternate allele: T
annotation: Annotation
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1162C>A
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
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  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4206C>A
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
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population: South Asian
population: African
population: European (Non-Finnish)
population: Other
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X-18213447-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213447
    reference: chr 0
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allele count: 1
allele frequency: 1.147302119067014e-5
allele num: 87161
alternate allele: A
annotation: Annotation
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  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
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  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4219C>T
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177324
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1149C>T
  hgvsp: ENST00000380033.4:c.1149C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: synonymous
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genotype depth: GenotypeDepth
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hgvs: p.Ala383Ala
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population: Other
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population: Latino
population: European (Non-Finnish)
population: African
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X-18213465-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213465
    reference: chr 0
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    position: 24018213465
    reference: chr 0
allele count: 1
allele frequency: 1.142478492842372e-5
allele num: 87529
alternate allele: T
annotation: Annotation
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  ensembl protein: ENSP00000369369
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  gene symbol: BEND2
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1131G>A
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  variant of: http://identifiers.org/hgnc/28509
canonical: true
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1797
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr377Thr
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4527
  num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

X-18213466-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213466
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213466
    reference: chr 0
allele count: 1
allele frequency: 1.142334932602239e-5
allele num: 87540
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1130C>G
  hgvsp: ENSP00000369372.4:p.Thr377Arg
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4238C>G
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Thr377Arg
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6636
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD

X-18213474-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213474
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213474
    reference: chr 0
allele count: 8
allele frequency: 9.132837115850038e-5
allele num: 87596
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1122G>A
  hgvsp: ENST00000380033.4:c.1122G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4246G>A
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser374Ser
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 8
  allele frequency: 1.205727204220045e-3
  allele num: 6635
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

X-18213495-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213495
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213495
    reference: chr 0
allele count: 12
allele frequency: 1.369722288805945e-4
allele num: 87609
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4267A>G
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1101A>G
  hgvsp: ENST00000380033.4:c.1101A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 965
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Thr367Thr
num of homozygotes: 0
population: Other
  type: Population
  allele count: 1
  allele frequency: 1.584786053882726e-3
  allele num: 631
  num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

X-18213500-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213500
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213500
    reference: chr 0
allele count: 1
allele frequency: 1.141552511415525e-5
allele num: 87600
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1096C>G
  hgvsp: ENSP00000369372.4:p.Gln366Glu
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4272C>G
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gln366Glu
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10081
  num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
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site quality: InbreedingCoeff
site quality: VQSLOD
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site quality: FS
site quality: MQ
site quality: QD

X-18213515-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213515
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213515
    reference: chr 0
allele count: 1
allele frequency: 1.142922452711583e-5
allele num: 87495
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1081G>A
  hgvsp: ENSP00000369372.4:p.Val361Met
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4287G>A
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Val361Met
num of homozygotes: 0
population: Other
  type: Population
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  allele num: 628
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
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site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
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X-18213516-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213516
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213516
    reference: chr 0
allele count: 1
allele frequency: 1.143772160585611e-5
allele num: 87430
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4288C>G
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1080C>G
  hgvsp: ENSP00000369372.4:p.Asn360Lys
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Finnish)
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  allele num: 4520
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population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
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site quality: FS
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X-18213535-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213535
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213535
    reference: chr 0
allele count: 1
allele frequency: 1.14980855687528e-5
allele num: 86971
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4307C>T
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1061C>T
  hgvsp: ENSP00000369372.4:p.Pro354Leu
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Finnish)
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population: European (Non-Finnish)
population: Latino
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X-18213549-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213549
    reference: chr 0
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    type: ExactPosition
    position: 24018213549
    reference: chr 0
allele count: 3
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allele num: 85901
alternate allele: C
annotation: Annotation
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  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4321A>G
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1047A>G
  hgvsp: ENSP00000369372.4:p.Ile349Met
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile349Met
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 47027
  num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum

X-18213550-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213550
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213550
    reference: chr 0
allele count: 1
allele frequency: 1.164266337567382e-5
allele num: 85891
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1046T>C
  hgvsp: ENSP00000369372.4:p.Ile349Thr
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4322T>C
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ile349Thr
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9222
  num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

X-18213570-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213570
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213571
    reference: chr 0
allele count: 9
allele frequency: 1.23634865031939e-4
allele num: 72795
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4343dupT
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1034-9dupT
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 533
  num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

X-18213570-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213570
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213569
    reference: chr 0
allele count: 74
allele frequency: 1.016553334707054e-3
allele num: 72795
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4343delT
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1034-9delT
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
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  allele num: 7836
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: GA
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
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X-18213571-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213571
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213571
    reference: chr 0
allele count: 22
allele frequency: 2.986290213112529e-4
allele num: 73670
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1034-9T>C
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4343T>C
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 3.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
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  allele num: 4124
  num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
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site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ

X-18213579-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213579
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213579
    reference: chr 0
allele count: 1
allele frequency: 1.252693290574736e-5
allele num: 79828
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1034-17T>C
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
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canonical: true
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num of homozygotes: 0
population: Other
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  allele num: 576
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population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: QD
site quality: BaseQRankSum
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X-18213583-T-C
type: Variant
location: Region
  begin: Position
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    position: 24018213583
    reference: chr 0
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    type: ExactPosition
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allele count: 8
allele frequency: 1.011800118886514e-4
allele num: 79067
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1034-21A>G
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
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  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4355A>G
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: East Asian
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population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: FS
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X-18213600-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213600
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213600
    reference: chr 0
allele count: 16
allele frequency: 2.106399504996116e-4
allele num: 75959
alternate allele: C
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1034-38A>G
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
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  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4372A>G
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
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population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
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site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
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X-18213600-T-TTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213600
    reference: chr 0
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    position: 24018213602
    reference: chr 0
allele count: 1
allele frequency: 1.316499690622573e-5
allele num: 75959
alternate allele: TTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4373_908-4372insTA
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1034-39_1034-38insTA
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
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population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
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reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
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X-18213602-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213602
    reference: chr 0
  end: Position
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    position: 24018213602
    reference: chr 0
allele count: 1
allele frequency: 1.32763336077109e-5
allele num: 75322
alternate allele: T
annotation: Annotation
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  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4374G>A
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1034-40G>A
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
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  allele frequency: 0.0e0
  allele num: 4257
  num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

X-18213603-A-ATTAATTCTTAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213603
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213614
    reference: chr 0
allele count: 1
allele frequency: 1.327668613913967e-5
allele num: 75320
alternate allele: ATTAATTCTTAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
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  allele num: 8001
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

X-18213604-T-TTAATTCTTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213604
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213613
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 75455
alternate allele: TTAATTCTTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
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  bin: 1.75e1
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genotype depth: GenotypeDepth
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  allele num: 5845
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population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
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X-18213606-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018213606
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018213606
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 74576
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.908-4378T>A
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1034-44T>A
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
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population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
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site quality: InbreedingCoeff
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X-18219888-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018219888
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018219888
    reference: chr 0
allele count: 2
allele frequency: 2.356184394990752e-5
allele num: 84883
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
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  gene symbol: BEND2
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1033+47G>A
  variant of: http://identifiers.org/hgnc/28509
canonical: true
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filter: PASS
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
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  allele frequency: 1.076889941847943e-4
  allele num: 9286
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

X-18219891-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018219891
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018219891
    reference: chr 0
allele count: 3
allele frequency: 3.528830545557202e-5
allele num: 85014
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1730C>T
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1033+44C>T
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
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  allele num: 6610
  num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
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site quality: DP
site quality: MQ
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site quality: MQRankSum

X-18219904-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018219904
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018219904
    reference: chr 0
allele count: 6
allele frequency: 7.03226638225056e-5
allele num: 85321
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1717G>A
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1033+31G>A
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 807
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
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  allele num: 8381
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population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: FS
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site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
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site quality: QD

X-18219905-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018219905
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018219905
    reference: chr 0
allele count: 2
allele frequency: 2.341536516261971e-5
allele num: 85414
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1033+30C>T
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1716C>T
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1527
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genotype depth: GenotypeDepth
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population: African
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population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
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site quality: MQRankSum
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X-18219915-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018219915
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018219915
    reference: chr 0
allele count: 3
allele frequency: 3.490320178704393e-5
allele num: 85952
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1033+20T>C
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1706T>C
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10113
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genotype depth: GenotypeDepth
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population: East Asian
population: Latino
population: African
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population: European (Non-Finnish)
population: Other
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site quality: BaseQRankSum
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site quality: QD
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X-18219929-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018219929
    reference: chr 0
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    position: 24018219929
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allele count: 1
allele frequency: 1.15492111888758e-5
allele num: 86586
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
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  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1033+6T>A
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
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  hgvsc: ENST00000380030.3:c.907+1692T>A
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.1033+6T>A
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4530
  num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
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site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
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site quality: QD

X-18219930-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018219930
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018219930
    reference: chr 0
allele count: 1
allele frequency: 1.154441135046524e-5
allele num: 86622
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
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  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1691G>A
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1033+5G>A
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: c.1033+5G>A
num of homozygotes: 0
population: Other
  type: Population
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  allele num: 622
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
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X-18219932-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018219932
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018219932
    reference: chr 0
allele count: 8
allele frequency: 9.220201461401931e-5
allele num: 86766
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
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  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1033+3G>T
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1689G>T
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: c.1033+3G>T
num of homozygotes: 0
population: East Asian
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population: African
population: Other
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population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

X-18219934-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018219934
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018219934
    reference: chr 0
allele count: 1
allele frequency: 1.15115864117234e-5
allele num: 86869
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1687G>C
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1033+1G>C
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: c.1033+1G>C
num of homozygotes: 0
population: Latino
  type: Population
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  allele num: 9308
  num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

X-18219934-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018219934
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018219934
    reference: chr 0
allele count: 1
allele frequency: 1.15115864117234e-5
allele num: 86869
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1033+1G>A
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1687G>A
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
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  allele num: 624
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population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
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X-18219956-C-T
type: Variant
location: Region
  begin: Position
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    position: 24018219956
    reference: chr 0
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    position: 24018219956
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allele count: 1
allele frequency: 1.141591607018505e-5
allele num: 87597
alternate allele: T
annotation: Annotation
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  gene symbol: BEND2
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
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  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1665G>A
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Val338Ile
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population: Other
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population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
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site quality: ClippingRankSum
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X-18219966-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018219966
    reference: chr 0
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    type: ExactPosition
    position: 24018219966
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allele count: 1
allele frequency: 1.140302864440795e-5
allele num: 87696
alternate allele: A
annotation: Annotation
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  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1655C>T
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.1002C>T
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  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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population: Latino
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  allele num: 9316
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population: African
population: Other
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population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
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site quality: VQSLOD
site quality: FS
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X-18219982-T-C
type: Variant
location: Region
  begin: Position
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    position: 24018219982
    reference: chr 0
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    type: ExactPosition
    position: 24018219982
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allele count: 4
allele frequency: 4.559287839239511e-5
allele num: 87733
alternate allele: C
annotation: Annotation
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  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1639A>G
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
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  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.986A>G
  hgvsp: ENSP00000369372.4:p.Asn329Ser
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: South Asian
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population: European (Finnish)
population: Latino
population: East Asian
population: Other
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site quality: BaseQRankSum
site quality: DP
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X-18219993-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018219993
    reference: chr 0
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    reference: chr 0
allele count: 1
allele frequency: 1.139705044334526e-5
allele num: 87742
alternate allele: T
annotation: Annotation
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  ensembl protein: ENSP00000369369
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  gene symbol: BEND2
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  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
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  gene symbol: BEND2
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  hgvsp: ENSP00000369372.4:p.Met325Ile
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2373
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1888
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5442
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  variant carriers: 1
hgvs: p.Met325Ile
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10119
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD

X-18220011-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018220011
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018220011
    reference: chr 0
allele count: 4
allele frequency: 4.558924093913836e-5
allele num: 87740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1610G>A
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.957G>A
  hgvsp: ENST00000380033.4:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ala319Ala
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4529
  num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP

X-18220012-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018220012
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018220012
    reference: chr 0
allele count: 2
allele frequency: 2.279462046956918e-5
allele num: 87740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1609C>T
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.956C>T
  hgvsp: ENSP00000369372.4:p.Ala319Val
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1324
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala319Val
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 9.881422924901186e-5
  allele num: 10120
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD

X-18220012-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018220012
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018220012
    reference: chr 0
allele count: 1
allele frequency: 1.139731023478459e-5
allele num: 87740
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1609C>G
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.956C>G
  hgvsp: ENSP00000369372.4:p.Ala319Gly
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10456
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala319Gly
num of homozygotes: 0
population: Other
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  allele count: 0
  allele frequency: 0.0e0
  allele num: 633
  num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

X-18220024-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018220024
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018220024
    reference: chr 0
allele count: 1
allele frequency: 1.140146850914398e-5
allele num: 87708
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1597G>T
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.944G>T
  hgvsp: ENSP00000369372.4:p.Ser315Ile
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5439
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser315Ile
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9316
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

X-18220047-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24018220047
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24018220047
    reference: chr 0
allele count: 2
allele frequency: 2.28835570201032e-5
allele num: 87399
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369369
  ensembl transcript: ENST00000380030
  gene symbol: BEND2
  hgvsc: ENST00000380030.3:c.907+1574A>T
  variant of: http://identifiers.org/hgnc/28509
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177324
  ensembl protein: ENSP00000369372
  ensembl transcript: ENST00000380033
  gene symbol: BEND2
  hgvsc: ENST00000380033.4:c.921A>T
  hgvsp: ENSP00000369372.4:p.Arg307Ser
  variant of: http://identifiers.org/hgnc/28509
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23512
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg307Ser
num of homozygotes: 0
reference allele: T

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7521
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.502250675202561e-5
allele num: 39988
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4076
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-1

QD
type: SiteQuality
SIO_000300: 1.642e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

DP
type: SiteQuality
SIO_000300: 1.321153e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6395
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9038
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8253
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45339
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6792
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.663e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.779633e6

VQSLOD
type: SiteQuality
SIO_000300: 4.53e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4489
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8286
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6974
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.099868015838099e-4
allele num: 9092
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.332e1

DP
type: SiteQuality
SIO_000300: 1.870464e6

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQ
type: SiteQuality
SIO_000300: 5.817e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.693e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6955
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6465
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8289
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.368338284116722e-5
allele num: 45784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4491
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.072e1

DP
type: SiteQuality
SIO_000300: 1.876743e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -8.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.05e0

VQSLOD
type: SiteQuality
SIO_000300: -2.586e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQ
type: SiteQuality
SIO_000300: 5.893e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 581
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6527
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.659883091578263e-5
allele num: 46190
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8327
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4505
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

DP
type: SiteQuality
SIO_000300: 1.909696e6

QD
type: SiteQuality
SIO_000300: 1.826e1

MQ
type: SiteQuality
SIO_000300: 5.993e1

FS
type: SiteQuality
SIO_000300: 4.284e0

VQSLOD
type: SiteQuality
SIO_000300: 6.820000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7517
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4513
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8385
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.138717197424984e-5
allele num: 46757
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 591
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9193
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.78e-2

DP
type: SiteQuality
SIO_000300: 1.946542e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.139e1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e-2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4521
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 611
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.4e-2

FS
type: SiteQuality
SIO_000300: 1.905e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.736e0

DP
type: SiteQuality
SIO_000300: 1.991526e6

QD
type: SiteQuality
SIO_000300: 9.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.33e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.76e-1

Latino
type: Population
allele count: 2
allele frequency: 2.155636990730761e-4
allele num: 9278
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8477
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4521
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.105750805449683e-5
allele num: 47489
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8641
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.77e-1

QD
type: SiteQuality
SIO_000300: 1.705e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.65e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.34e-1

FS
type: SiteQuality
SIO_000300: 5.232e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

VQSLOD
type: SiteQuality
SIO_000300: -3.03e-2

DP
type: SiteQuality
SIO_000300: 1.99501e6

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6627
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 613
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4521
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.143772160585611e-4
allele num: 8743
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9282
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.731e1

FS
type: SiteQuality
SIO_000300: 1.162e0

MQ
type: SiteQuality
SIO_000300: 5.889e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.123e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.75e-1

DP
type: SiteQuality
SIO_000300: 1.997324e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.328e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.043e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9377
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6629
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.095513505584544e-5
allele num: 47721
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4523
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.74e-2

QD
type: SiteQuality
SIO_000300: 2.835e1

VQSLOD
type: SiteQuality
SIO_000300: 8.28e-1

DP
type: SiteQuality
SIO_000300: 2.014827e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.074922068150059e-4
allele num: 9303
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47795
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.405e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.02e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

FS
type: SiteQuality
SIO_000300: 3.38e0

VQSLOD
type: SiteQuality
SIO_000300: 3.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.019e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e0

DP
type: SiteQuality
SIO_000300: 2.021415e6

African
type: Population
allele count: 20
allele frequency: 2.350452462098954e-3
allele num: 8509
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.074460083807887e-4
allele num: 9307
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47818
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.767e1

FS
type: SiteQuality
SIO_000300: 5.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.869999999999999e0

DP
type: SiteQuality
SIO_000300: 2.024048e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.87e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9305
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47791
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.175502527330434e-4
allele num: 8507
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9563
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.499000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.12e1

DP
type: SiteQuality
SIO_000300: 2.019554e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.23e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.908e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.964e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9306
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.507613447911955e-4
allele num: 6633
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8507
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: -4.73e-1

MQ
type: SiteQuality
SIO_000300: 5.876e1

FS
type: SiteQuality
SIO_000300: 7.549e0

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.066e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.47e0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 9296
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African
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allele frequency: 0.0e0
allele num: 8500
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4524
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Other
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allele num: 618
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South Asian
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.446e0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-2

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.047e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

DP
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QD
type: SiteQuality
SIO_000300: 1.578e1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4523
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African
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allele frequency: 0.0e0
allele num: 8497
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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allele num: 618
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Latino
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allele frequency: 0.0e0
allele num: 9294
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.33e-2

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 3.311e1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8482
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 615
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9286
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South Asian
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allele frequency: 1.124732875941964e-4
allele num: 8891
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4521
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47542
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.66e-1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.25e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.672e0

FS
type: SiteQuality
SIO_000300: 1.4312e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.93e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.549e0

QD
type: SiteQuality
SIO_000300: 1.679e1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.118599182220716e-5
allele num: 47201
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8437
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4515
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
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Latino
type: Population
allele count: 0
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South Asian
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allele count: 0
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.95954e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.931e1

MQRankSum
type: SiteQuality
SIO_000300: -4.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.32e0

QD
type: SiteQuality
SIO_000300: 4.23e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47152
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9257
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South Asian
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allele count: 0
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allele num: 8255
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African
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allele count: 1
allele frequency: 1.185677021579322e-4
allele num: 8434
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4513
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.155e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.026e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.19e0

VQSLOD
type: SiteQuality
SIO_000300: -2.807e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

QD
type: SiteQuality
SIO_000300: 2.23e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.953786e6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4507
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8069
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.253328229339458e-5
allele num: 47022
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African
type: Population
allele count: 0
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Other
type: Population
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allele num: 603
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East Asian
type: Population
allele count: 0
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.02e0

FS
type: SiteQuality
SIO_000300: 1.013e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.81e-1

MQ
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.19e-1

QD
type: SiteQuality
SIO_000300: 1.569e1

East Asian
type: Population
allele count: 0
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African
type: Population
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allele num: 8412
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South Asian
type: Population
allele count: 0
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allele num: 8023
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.127931225262799e-5
allele num: 46994
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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allele num: 603
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQ
type: SiteQuality
SIO_000300: 5.91e1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.769e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8407
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.258490365165549e-5
allele num: 46965
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4506
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 603
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.920576e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 3.076e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.16e-2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46965
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East Asian
type: Population
allele count: 0
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allele num: 6579
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African
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allele count: 1
allele frequency: 1.189343482397717e-4
allele num: 8408
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4508
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FS
type: SiteQuality
SIO_000300: 5.271e0

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.4e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

South Asian
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allele count: 0
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Latino
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allele count: 1
allele frequency: 1.083775875149019e-4
allele num: 9227
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46894
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East Asian
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allele count: 0
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African
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European (Finnish)
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allele count: 0
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allele num: 4504
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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Other
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East Asian
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South Asian
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European (Non-Finnish)
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African
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Latino
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.944e1

MQRankSum
type: SiteQuality
SIO_000300: -9.49e-1

African
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East Asian
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Other
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allele count: 0
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Latino
type: Population
allele count: 0
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South Asian
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European (Finnish)
type: Population
allele count: 0
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allele num: 4490
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QD
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
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DP
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

European (Finnish)
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allele count: 0
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allele num: 4482
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46479
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Latino
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allele count: 0
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South Asian
type: Population
allele count: 0
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African
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allele frequency: 2.39377618192699e-4
allele num: 8355
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Other
type: Population
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DP
type: SiteQuality
SIO_000300: 1.843838e6

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.279e0

European (Finnish)
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Other
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Latino
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South Asian
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allele frequency: 4.137360364087712e-4
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European (Non-Finnish)
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allele count: 0
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East Asian
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MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQ
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.863e0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.744e0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.353e1

South Asian
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Other
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European (Non-Finnish)
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allele count: 0
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African
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Latino
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European (Finnish)
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -7.76e-1

European (Finnish)
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allele count: 0
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Latino
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African
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Other
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allele frequency: 1.689189189189189e-3
allele num: 592
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46961
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7264
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.351e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.699e0

MQRankSum
type: SiteQuality
SIO_000300: -4.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.45e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.867199e6

MQ
type: SiteQuality
SIO_000300: 5.946e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9248
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.550295857988166e-4
allele num: 8450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7307
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e0

FS
type: SiteQuality
SIO_000300: 7.736e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

MQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

DP
type: SiteQuality
SIO_000300: 1.876792e6

QD
type: SiteQuality
SIO_000300: 1.478e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 256
allele frequency: 3.028868906767629e-2
allele num: 8452
num of homozygotes: 3

Latino
type: Population
allele count: 12
allele frequency: 1.297437560817386e-3
allele num: 9249
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7356
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European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.502859086367792e-5
allele num: 47043
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.146e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

FS
type: SiteQuality
SIO_000300: 1.771e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.588e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.368e1

QD
type: SiteQuality
SIO_000300: 1.75e1

DP
type: SiteQuality
SIO_000300: 1.892882e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7345
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 2
allele frequency: 2.364345667336565e-4
allele num: 8459
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47043
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.073e0

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

QD
type: SiteQuality
SIO_000300: 1.79e1

DP
type: SiteQuality
SIO_000300: 1.889513e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-2

FS
type: SiteQuality
SIO_000300: 7.876e0

VQSLOD
type: SiteQuality
SIO_000300: -8.112e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.38e-2

MQ
type: SiteQuality
SIO_000300: 5.94e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7345
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6589
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8459
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.125714771591948e-5
allele num: 47043
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.79e1

FS
type: SiteQuality
SIO_000300: 7.876e0

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.073e0

VQSLOD
type: SiteQuality
SIO_000300: -8.112e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.38e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

DP
type: SiteQuality
SIO_000300: 1.889513e6

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.116939751894661e-5
allele num: 47238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6609
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4523
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9262
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8477
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 601
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ReadPosRankSum
type: SiteQuality
SIO_000300: -9.95e-1

QD
type: SiteQuality
SIO_000300: 2.813e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e0

VQSLOD
type: SiteQuality
SIO_000300: -2.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.82e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.919322e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.893e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 611
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6623
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9281
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.155935729973414e-4
allele num: 8651
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

DP
type: SiteQuality
SIO_000300: 1.947578e6

QD
type: SiteQuality
SIO_000300: 1.271e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

FS
type: SiteQuality
SIO_000300: 2.637e0

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 1
allele frequency: 1.175364362952515e-4
allele num: 8508
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European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.289176327540304e-5
allele num: 47701
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
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VQSLOD
type: SiteQuality
SIO_000300: 8.6e-1

DP
type: SiteQuality
SIO_000300: 1.966042e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.138e0

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.98e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.185e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.5e-1

QD
type: SiteQuality
SIO_000300: 1.328e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.090869174315763e-5
allele num: 47827
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9742
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.51e0

DP
type: SiteQuality
SIO_000300: 1.98e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.94e-2

QD
type: SiteQuality
SIO_000300: 3.322e1

VQSLOD
type: SiteQuality
SIO_000300: -4.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.288e0

MQ
type: SiteQuality
SIO_000300: 5.853e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.89e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.174674027957242e-4
allele num: 8513
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47914
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 10013
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.869e0

MQRankSum
type: SiteQuality
SIO_000300: -1.827e0

QD
type: SiteQuality
SIO_000300: 8.07e0

FS
type: SiteQuality
SIO_000300: 1.396e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: -1.516e0

DP
type: SiteQuality
SIO_000300: 1.989487e6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47917
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.983028850953379e-5
allele num: 10017
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Other
type: Population
allele count: 0
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allele num: 631
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MQ
type: SiteQuality
SIO_000300: 5.941e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.11e-2

QD
type: SiteQuality
SIO_000300: 2.964e1

DP
type: SiteQuality
SIO_000300: 1.990043e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.36e0

South Asian
type: Population
allele count: 0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4527
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47926
num of homozygotes: 0

African
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allele count: 0
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Latino
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allele count: 0
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Other
type: Population
allele count: 0
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allele num: 630
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MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

QD
type: SiteQuality
SIO_000300: 1.759e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 1.73e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.13e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.809e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.96e-1

DP
type: SiteQuality
SIO_000300: 1.992114e6

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 2.295252999478352e-4
allele num: 47925
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9297
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.125e0

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.37e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.489e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

VQSLOD
type: SiteQuality
SIO_000300: 4.95e0

DP
type: SiteQuality
SIO_000300: 1.992233e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.235e-1

African
type: Population
allele count: 0
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allele num: 8514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.086680716983494e-5
allele num: 47923
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
num of homozygotes: 0

Latino
type: Population
allele count: 0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
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allele num: 6631
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.991318e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.713e0

MQRankSum
type: SiteQuality
SIO_000300: 2.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.708e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 9.035e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

QD
type: SiteQuality
SIO_000300: 1.481e1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.088729217144289e-5
allele num: 47876
num of homozygotes: 0

South Asian
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allele count: 0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8511
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4523
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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allele num: 6624
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DP
type: SiteQuality
SIO_000300: 1.988752e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.818e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e0

MQRankSum
type: SiteQuality
SIO_000300: -1.106e0

VQSLOD
type: SiteQuality
SIO_000300: 5.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.173e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e0

FS
type: SiteQuality
SIO_000300: 3.772e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

South Asian
type: Population
allele count: 0
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allele num: 10021
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6623
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9285
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.090082558261051e-5
allele num: 47845
num of homozygotes: 0

African
type: Population
allele count: 0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 626
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.986532e6

VQSLOD
type: SiteQuality
SIO_000300: 3.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.026e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
type: SiteQuality
SIO_000300: 1.28e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4515
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8503
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.100399075824407e-5
allele num: 47610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9263
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9852
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 1.969762e6

VQSLOD
type: SiteQuality
SIO_000300: 6.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: 5.44e-1

MQ
type: SiteQuality
SIO_000300: 5.884e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.437e0

QD
type: SiteQuality
SIO_000300: 1.154e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.904e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8461
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.155901535872081e-4
allele num: 9506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9223
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6565
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 619
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.85e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e0

VQSLOD
type: SiteQuality
SIO_000300: -2.172e-1

DP
type: SiteQuality
SIO_000300: 1.923799e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.37e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.378e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.66e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 619
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9494
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African
type: Population
allele count: 1
allele frequency: 1.181614084839891e-4
allele num: 8463
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4501
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47028
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 1.923176e6

FS
type: SiteQuality
SIO_000300: 4.592e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.03e-1

QD
type: SiteQuality
SIO_000300: 1.407e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

African
type: Population
allele count: 1
allele frequency: 1.276161306789178e-4
allele num: 7836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4055
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South Asian
type: Population
allele count: 3
allele frequency: 4.307250538406317e-4
allele num: 6965
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.261383990514392e-4
allele num: 39639
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5699
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.44e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.83e-1

FS
type: SiteQuality
SIO_000300: 3.083e0

DP
type: SiteQuality
SIO_000300: 1.798908e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-2

QD
type: SiteQuality
SIO_000300: 1.55e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 533
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.466091245376079e-4
allele num: 4055
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 1.228285664151606e-3
allele num: 5699
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South Asian
type: Population
allele count: 1
allele frequency: 1.435750179468773e-4
allele num: 6965
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 6.197322756569162e-4
allele num: 8068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 55
allele frequency: 1.387522389565832e-3
allele num: 39639
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.083e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.798908e6

VQSLOD
type: SiteQuality
SIO_000300: 8.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.44e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.4e-1

QD
type: SiteQuality
SIO_000300: 1.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.31e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 543
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5815
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.000500050005001e-5
allele num: 39996
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 5.063291139240507e-4
allele num: 7900
num of homozygotes: 0

South Asian
type: Population
allele count: 16
allele frequency: 2.270791938688618e-3
allele num: 7046
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e0

DP
type: SiteQuality
SIO_000300: 1.751126e6

FS
type: SiteQuality
SIO_000300: 1.941e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.002e0

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.23e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

QD
type: SiteQuality
SIO_000300: 1.111e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8175
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African
type: Population
allele count: 1
allele frequency: 1.21654501216545e-4
allele num: 8220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43509
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4356
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QD
type: SiteQuality
SIO_000300: 3.004e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.685e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.588767e6

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

Latino
type: Population
allele count: 3
allele frequency: 3.422703936109526e-4
allele num: 8765
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8173
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.161089566449156e-4
allele num: 43063
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 571
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VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.57e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.317e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.29e-2

QD
type: SiteQuality
SIO_000300: 1.471e1

DP
type: SiteQuality
SIO_000300: 1.543548e6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7377
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4282
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.115e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.25e-1

FS
type: SiteQuality
SIO_000300: 9.35e0

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

DP
type: SiteQuality
SIO_000300: 1.408261e6

VQSLOD
type: SiteQuality
SIO_000300: 1.29e-1

QD
type: SiteQuality
SIO_000300: 8.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.424007368982402e-5
allele num: 41254
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8044
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4282
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

DP
type: SiteQuality
SIO_000300: 1.408261e6

QD
type: SiteQuality
SIO_000300: 8.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.25e-1

FS
type: SiteQuality
SIO_000300: 9.35e0

MQ
type: SiteQuality
SIO_000300: 4.115e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7997
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7261
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.44355390479914e-5
allele num: 40924
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 543
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DP
type: SiteQuality
SIO_000300: 1.402353e6

MQRankSum
type: SiteQuality
SIO_000300: -1.283e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.072e0

QD
type: SiteQuality
SIO_000300: 2.98e0

MQ
type: SiteQuality
SIO_000300: 3.498e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 6.645e0

VQSLOD
type: SiteQuality
SIO_000300: -4.695e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.306e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7290
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4257
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.445705341420466e-5
allele num: 40888
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.453e0

DP
type: SiteQuality
SIO_000300: 1.394393e6

QD
type: SiteQuality
SIO_000300: 5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.261e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.856e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.365e0

VQSLOD
type: SiteQuality
SIO_000300: -1.346e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

MQ
type: SiteQuality
SIO_000300: 3.397e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7306
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4261
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8011
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 545
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40974
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.04e0

MQ
type: SiteQuality
SIO_000300: 3.55e1

MQRankSum
type: SiteQuality
SIO_000300: -1.297e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.371e0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.477e0

DP
type: SiteQuality
SIO_000300: 1.393737e6

QD
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7150
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7967
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4242
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Other
type: Population
allele count: 0
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East Asian
type: Population
allele count: 0
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allele num: 5787
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.372e0

FS
type: SiteQuality
SIO_000300: 2.273e0

VQSLOD
type: SiteQuality
SIO_000300: -4.936e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 3.523e1

DP
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SIO_000300: 1.384308e6

MQRankSum
type: SiteQuality
SIO_000300: -1.507e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.504e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8120
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

East Asian
type: Population
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African
type: Population
allele count: 1
allele frequency: 1.183011948420679e-4
allele num: 8453
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47283
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.31e1

MQRankSum
type: SiteQuality
SIO_000300: -1.107e0

QD
type: SiteQuality
SIO_000300: 8.970000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -1.339e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.325e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.71e-1

DP
type: SiteQuality
SIO_000300: 1.838995e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47334
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.665689149560117e-4
allele num: 8184
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.49e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.352e0

FS
type: SiteQuality
SIO_000300: 6.586e0

QD
type: SiteQuality
SIO_000300: 2.45e1

VQSLOD
type: SiteQuality
SIO_000300: -1.851e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.213e0

DP
type: SiteQuality
SIO_000300: 1.844807e6

MQ
type: SiteQuality
SIO_000300: 5.911e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.44e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 617
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.076194575979337e-4
allele num: 9292
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.360439041661749e-4
allele num: 8473
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.327111673521038e-5
allele num: 47415
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.874059e6

MQRankSum
type: SiteQuality
SIO_000300: -7.72e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-2

MQ
type: SiteQuality
SIO_000300: 5.632e1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.319e0

QD
type: SiteQuality
SIO_000300: 1.803e1

African
type: Population
allele count: 1
allele frequency: 1.180219520830875e-4
allele num: 8473
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6621
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 617
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.71e-1

FS
type: SiteQuality
SIO_000300: 5.772e0

QD
type: SiteQuality
SIO_000300: 1.71e1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e-1

DP
type: SiteQuality
SIO_000300: 1.877813e6

MQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.73e-2

MQ
type: SiteQuality
SIO_000300: 5.635e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.305435285215857e-5
allele num: 47578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.48e0

MQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.429e1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.26e-1

FS
type: SiteQuality
SIO_000300: 1.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.5e-2

DP
type: SiteQuality
SIO_000300: 1.898772e6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.175226231049477e-4
allele num: 8509
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47719
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9305
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9268
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.98e1

FS
type: SiteQuality
SIO_000300: 1.793e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e0

DP
type: SiteQuality
SIO_000300: 1.917005e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

VQSLOD
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.573e0

QD
type: SiteQuality
SIO_000300: 1.364e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.094986696834475e-5
allele num: 47733
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9305
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.918584e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.92e-2

MQ
type: SiteQuality
SIO_000300: 5.922e1

VQSLOD
type: SiteQuality
SIO_000300: -5.82e-2

QD
type: SiteQuality
SIO_000300: 3.073e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 8.51063829787234e-4
allele num: 9400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47764
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.922418e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.951e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.669e0

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

QD
type: SiteQuality
SIO_000300: 1.75e1

MQ
type: SiteQuality
SIO_000300: 5.963e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47782
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.054741061069507e-4
allele num: 9481
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

DP
type: SiteQuality
SIO_000300: 1.925228e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.28e-1

QD
type: SiteQuality
SIO_000300: 1.086e1

MQ
type: SiteQuality
SIO_000300: 5.971e1

FS
type: SiteQuality
SIO_000300: 3.119e0

VQSLOD
type: SiteQuality
SIO_000300: 9.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.13e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.507386192342478e-4
allele num: 6634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9481
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47782
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.119e0

VQSLOD
type: SiteQuality
SIO_000300: 9.17e-1

DP
type: SiteQuality
SIO_000300: 1.925228e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.13e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.28e-1

QD
type: SiteQuality
SIO_000300: 1.086e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.85e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9313
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47939
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.174536058256989e-4
allele num: 8514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10034
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.052e0

QD
type: SiteQuality
SIO_000300: 7.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e-1

FS
type: SiteQuality
SIO_000300: 3.158e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.942635e6

VQSLOD
type: SiteQuality
SIO_000300: -2.787e0

MQ
type: SiteQuality
SIO_000300: 5.807e1

MQRankSum
type: SiteQuality
SIO_000300: 2.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.5e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.904912836767037e-5
allele num: 10096
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47971
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.944978e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.15e-1

FS
type: SiteQuality
SIO_000300: 7.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.214e0

QD
type: SiteQuality
SIO_000300: 1.229e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.336112037345781e-5
allele num: 47984
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

DP
type: SiteQuality
SIO_000300: 1.94645e6

VQSLOD
type: SiteQuality
SIO_000300: 9.130000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.119e-1

FS
type: SiteQuality
SIO_000300: 4.84e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.76e-1

MQ
type: SiteQuality
SIO_000300: 5.908e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.76e-1

QD
type: SiteQuality
SIO_000300: 2.149e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8517
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.08385429690756e-5
allele num: 47988
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.524e-1

DP
type: SiteQuality
SIO_000300: 1.946618e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

QD
type: SiteQuality
SIO_000300: 3.134e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.506704836522525e-4
allele num: 6637
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.251823448505815e-5
allele num: 47986
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

FS
type: SiteQuality
SIO_000300: 5.768e0

MQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.175e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.895e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

QD
type: SiteQuality
SIO_000300: 2.047e1

MQ
type: SiteQuality
SIO_000300: 5.89e1

DP
type: SiteQuality
SIO_000300: 1.946548e6

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47987
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.073191672032625e-4
allele num: 9318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.0e-1

FS
type: SiteQuality
SIO_000300: 5.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.748e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.146e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

DP
type: SiteQuality
SIO_000300: 1.94656e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.116e0

QD
type: SiteQuality
SIO_000300: 1.402e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.08389772229979e-5
allele num: 47987
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.0e-1

FS
type: SiteQuality
SIO_000300: 5.51e-1

DP
type: SiteQuality
SIO_000300: 1.94656e6

MQ
type: SiteQuality
SIO_000300: 5.983e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.748e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.146e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.116e0

QD
type: SiteQuality
SIO_000300: 1.402e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084897006087899e-5
allele num: 47964
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10117
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e0

DP
type: SiteQuality
SIO_000300: 1.94569e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

MQ
type: SiteQuality
SIO_000300: 5.875e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQRankSum
type: SiteQuality
SIO_000300: 9.45e-1

QD
type: SiteQuality
SIO_000300: 2.875e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.729e-1