X-17743963-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017743963
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017743963
    reference: chr 0
allele count: 1
allele frequency: 1.14100545400607e-5
allele num: 87642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1206G>A
  hgvsp: ENST00000398097.3:c.1206G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1674G>A
  hgvsp: ENST00000380060.3:c.1674G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
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  variant carriers: 0
hgvs: p.Arg558Arg
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9321
  num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-17743964-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017743964
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017743964
    reference: chr 0
allele count: 1
allele frequency: 1.140940363047223e-5
allele num: 87647
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1207G>C
  hgvsp: ENSP00000381170.3:p.Gly403Arg
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1675G>C
  hgvsp: ENSP00000369400.3:p.Gly559Arg
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2342
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  variant carriers: 0
hgvs: p.Gly559Arg
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9321
  num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD

X-17743973-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017743973
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017743973
    reference: chr 0
allele count: 7
allele frequency: 7.985762526238934e-5
allele num: 87656
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1684C>T
  hgvsp: ENSP00000369400.3:p.Arg562Cys
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1216C>T
  hgvsp: ENSP00000381170.3:p.Arg406Cys
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg562Cys
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9322
  num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS

X-17743974-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017743974
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017743974
    reference: chr 0
allele count: 13
allele frequency: 1.483036345798444e-4
allele num: 87658
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1685G>A
  hgvsp: ENSP00000369400.3:p.Arg562His
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1217G>A
  hgvsp: ENSP00000381170.3:p.Arg406His
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12344
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Arg562His
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6630
  num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

X-17743983-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017743983
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017743983
    reference: chr 0
allele count: 2
allele frequency: 2.281568350083848e-5
allele num: 87659
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1226G>A
  hgvsp: ENSP00000381170.3:p.Arg409Gln
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1694G>A
  hgvsp: ENSP00000369400.3:p.Arg565Gln
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 35032
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  variant carriers: 0
hgvs: p.Arg565Gln
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10119
  num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

X-17743986-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017743986
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017743986
    reference: chr 0
allele count: 52
allele frequency: 5.931739368497901e-4
allele num: 87664
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1697T>C
  hgvsp: ENSP00000369400.3:p.Met566Thr
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1229T>C
  hgvsp: ENSP00000381170.3:p.Met410Thr
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Met566Thr
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8508
  num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

X-17744009-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744009
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744009
    reference: chr 0
allele count: 1
allele frequency: 1.140810203406459e-5
allele num: 87657
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1252G>A
  hgvsp: ENSP00000381170.3:p.Asp418Asn
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1720G>A
  hgvsp: ENSP00000369400.3:p.Asp574Asn
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asp574Asn
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9321
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

X-17744013-TCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744013
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744010
    reference: chr 0
allele count: 1
allele frequency: 1.140706097074089e-5
allele num: 87665
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1729_1731delTCC
  hgvsp: ENSP00000369400.3:p.Ser577del
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1261_1263delTCC
  hgvsp: ENSP00000381170.3:p.Ser421del
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 10202
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  variant carriers: 0
hgvs: p.Ser577del
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6631
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: TCTC
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

X-17744022-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744022
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744022
    reference: chr 0
allele count: 7
allele frequency: 7.984123001117777e-5
allele num: 87674
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1733A>G
  hgvsp: ENSP00000369400.3:p.Asn578Ser
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1265A>G
  hgvsp: ENSP00000381170.3:p.Asn422Ser
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1713
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asn578Ser
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8506
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
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X-17744031-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744031
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744031
    reference: chr 0
allele count: 3
allele frequency: 3.421845058855735e-5
allele num: 87672
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1274C>T
  hgvsp: ENSP00000381170.3:p.Thr425Met
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1742C>T
  hgvsp: ENSP00000369400.3:p.Thr581Met
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Thr581Met
num of homozygotes: 0
population: South Asian
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  allele num: 10118
  num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
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site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
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X-17744032-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744032
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744032
    reference: chr 0
allele count: 20
allele frequency: 2.281256059586408e-4
allele num: 87671
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1275G>A
  hgvsp: ENST00000398097.3:c.1275G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1743G>A
  hgvsp: ENST00000380060.3:c.1743G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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hgvs: p.Thr581Thr
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population: Latino
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  allele num: 9322
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population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
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site quality: ClippingRankSum
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site quality: DP
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X-17744046-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744046
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744046
    reference: chr 0
allele count: 1
allele frequency: 1.140406897180914e-5
allele num: 87688
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1289T>C
  hgvsp: ENSP00000381170.3:p.Ile430Thr
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1757T>C
  hgvsp: ENSP00000369400.3:p.Ile586Thr
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Ile586Thr
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
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  allele num: 8506
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population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
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site quality: FS
site quality: MQ
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X-17744050-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744050
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744050
    reference: chr 0
allele count: 1
allele frequency: 1.140458920669678e-5
allele num: 87684
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1761C>T
  hgvsp: ENST00000380060.3:c.1761C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1293C>T
  hgvsp: ENST00000398097.3:c.1293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.His587His
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8505
  num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
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site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

X-17744056-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744056
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744056
    reference: chr 0
allele count: 2
allele frequency: 2.281230039237157e-5
allele num: 87672
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1299C>A
  hgvsp: ENST00000398097.3:c.1299C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1767C>A
  hgvsp: ENST00000380060.3:c.1767C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ile589Ile
num of homozygotes: 0
population: East Asian
  type: Population
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  allele frequency: 3.01568154402895e-4
  allele num: 6632
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
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site quality: MQ
site quality: ClippingRankSum
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site quality: InbreedingCoeff
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X-17744061-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744061
    reference: chr 0
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    type: ExactPosition
    position: 24017744061
    reference: chr 0
allele count: 1
allele frequency: 1.140914328743055e-5
allele num: 87649
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1772C>T
  hgvsp: ENSP00000369400.3:p.Thr591Met
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1304C>T
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  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Finnish)
  type: Population
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  allele num: 4528
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population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
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site quality: VQSLOD
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site quality: MQ
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X-17744068-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744068
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744068
    reference: chr 0
allele count: 2
allele frequency: 2.285087518851972e-5
allele num: 87524
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1779C>T
  hgvsp: ENST00000380060.3:c.1779C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1311C>T
  hgvsp: ENST00000398097.3:c.1311C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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hgvs: p.Gly593Gly
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population: African
  type: Population
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  allele num: 8479
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population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
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X-17744069-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744069
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744069
    reference: chr 0
allele count: 1
allele frequency: 1.141200771451722e-5
allele num: 87627
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1312G>A
  hgvsp: ENSP00000381170.3:p.Val438Ile
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  ensembl protein: ENSP00000369400
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  gene symbol: NHS
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  variant of: http://identifiers.org/hgnc/7820
canonical: true
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Val594Ile
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 9.882399446585631e-5
  allele num: 10119
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

X-17744084-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744084
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744084
    reference: chr 0
allele count: 1
allele frequency: 1.141083572960884e-5
allele num: 87636
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1795C>T
  hgvsp: ENSP00000369400.3:p.His599Tyr
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1327C>T
  hgvsp: ENSP00000381170.3:p.His443Tyr
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.His599Tyr
num of homozygotes: 0
population: European (Finnish)
  type: Population
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  allele num: 4530
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population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

X-17744086-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744086
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744086
    reference: chr 0
allele count: 1
allele frequency: 1.140992435220155e-5
allele num: 87643
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1797C>A
  hgvsp: ENSP00000369400.3:p.His599Gln
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1329C>A
  hgvsp: ENSP00000381170.3:p.His443Gln
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.His599Gln
num of homozygotes: 0
population: East Asian
  type: Population
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  allele num: 6633
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
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site quality: VQSLOD
site quality: ReadPosRankSum
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site quality: DP
site quality: FS
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X-17744103-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744103
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744103
    reference: chr 0
allele count: 1
allele frequency: 1.140810203406459e-5
allele num: 87657
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1814A>G
  hgvsp: ENSP00000369400.3:p.Asp605Gly
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1346A>G
  hgvsp: ENSP00000381170.3:p.Asp449Gly
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Asp605Gly
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
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  allele num: 47915
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population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: A
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site quality: QD
site quality: ReadPosRankSum
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site quality: InbreedingCoeff
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site quality: MQ
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X-17744121-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744121
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744121
    reference: chr 0
allele count: 2
allele frequency: 2.281178000319365e-5
allele num: 87674
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1832G>C
  hgvsp: ENSP00000369400.3:p.Gly611Ala
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
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  gene symbol: NHS
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  hgvsp: ENSP00000381170.3:p.Gly455Ala
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
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hgvs: p.Gly611Ala
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6633
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

X-17744145-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744145
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744145
    reference: chr 0
allele count: 7
allele frequency: 7.983667696939974e-5
allele num: 87679
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1856C>T
  hgvsp: ENSP00000369400.3:p.Thr619Met
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1388C>T
  hgvsp: ENSP00000381170.3:p.Thr463Met
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Thr619Met
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 47934
  num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum

X-17744146-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744146
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744146
    reference: chr 0
allele count: 3
allele frequency: 3.421649919591227e-5
allele num: 87677
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1389G>A
  hgvsp: ENST00000398097.3:c.1389G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1857G>A
  hgvsp: ENST00000380060.3:c.1857G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Thr619Thr
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 633
  num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
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X-17744146-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744146
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744146
    reference: chr 0
allele count: 3
allele frequency: 3.421649919591227e-5
allele num: 87677
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1857G>C
  hgvsp: ENST00000380060.3:c.1857G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1389G>C
  hgvsp: ENST00000398097.3:c.1389G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
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genotype depth: GenotypeDepth
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hgvs: p.Thr619Thr
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population: Latino
  type: Population
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  allele frequency: 0.0e0
  allele num: 9322
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population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
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X-17744155-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744155
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744155
    reference: chr 0
allele count: 5
allele frequency: 5.70203448590457e-5
allele num: 87688
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1866G>A
  hgvsp: ENST00000380060.3:c.1866G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
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  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1398G>A
  hgvsp: ENST00000398097.3:c.1398G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ser622Ser
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9322
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: FS
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site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
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site quality: DP
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X-17744161-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744161
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744161
    reference: chr 0
allele count: 1
allele frequency: 1.140172850204091e-5
allele num: 87706
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1872C>T
  hgvsp: ENST00000380060.3:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1404C>T
  hgvsp: ENST00000398097.3:c.1404C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35518
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2359
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr624Thr
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 47950
  num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

X-17744167-A-AACC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744167
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744170
    reference: chr 0
allele count: 1
allele frequency: 1.140120852810398e-5
allele num: 87710
alternate allele: AACC
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1412_1414dupCCA
  hgvsp: ENSP00000381170.3:p.Thr471dup
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1880_1882dupCCA
  hgvsp: ENSP00000369400.3:p.Thr627dup
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2313
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr627dup
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9322
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

X-17744167-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744167
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744167
    reference: chr 0
allele count: 1
allele frequency: 1.140120852810398e-5
allele num: 87710
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1410A>C
  hgvsp: ENSP00000381170.3:p.Glu470Asp
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1878A>C
  hgvsp: ENSP00000369400.3:p.Glu626Asp
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8952
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 3.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 51
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2364
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu626Asp
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 633
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

X-17744181-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744181
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744181
    reference: chr 0
allele count: 1
allele frequency: 1.139873929943348e-5
allele num: 87729
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1424C>T
  hgvsp: ENSP00000381170.3:p.Ala475Val
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1892C>T
  hgvsp: ENSP00000369400.3:p.Ala631Val
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12461
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genotype depth: GenotypeDepth
  all individuals: 78
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 739
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 739
  bin: 8.25e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 720
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 35620
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 13
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2362
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala631Val
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 47971
  num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

X-17744191-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744191
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744191
    reference: chr 0
allele count: 17
allele frequency: 1.937763592841673e-4
allele num: 87730
alternate allele: G
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1434T>G
  hgvsp: ENST00000398097.3:c.1434T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1902T>G
  hgvsp: ENST00000380060.3:c.1902T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro634Pro
num of homozygotes: 1
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
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X-17744221-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744221
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744221
    reference: chr 0
allele count: 8
allele frequency: 9.117952107956553e-5
allele num: 87739
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1932G>A
  hgvsp: ENST00000380060.3:c.1932G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1464G>A
  hgvsp: ENST00000398097.3:c.1464G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser644Ser
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10125
  num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
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X-17744223-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744223
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744223
    reference: chr 0
allele count: 1
allele frequency: 1.139731023478459e-5
allele num: 87740
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1466A>G
  hgvsp: ENSP00000381170.3:p.Glu489Gly
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1934A>G
  hgvsp: ENSP00000369400.3:p.Glu645Gly
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1716
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Glu645Gly
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4530
  num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS

X-17744254-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744254
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744254
    reference: chr 0
allele count: 1
allele frequency: 1.139627114008296e-5
allele num: 87748
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1497T>C
  hgvsp: ENST00000398097.3:c.1497T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1965T>C
  hgvsp: ENST00000380060.3:c.1965T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 713
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Asn655Asn
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6637
  num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

X-17744258-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744258
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744258
    reference: chr 0
allele count: 1
allele frequency: 1.139640101655897e-5
allele num: 87747
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1501G>A
  hgvsp: ENSP00000381170.3:p.Asp501Asn
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1969G>A
  hgvsp: ENSP00000369400.3:p.Asp657Asn
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 856
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asp657Asn
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.083941149501938e-5
  allele num: 47986
  num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
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site quality: MQRankSum
site quality: FS
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X-17744267-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744267
    reference: chr 0
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    type: ExactPosition
    position: 24017744267
    reference: chr 0
allele count: 1
allele frequency: 1.13960113960114e-5
allele num: 87750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  gene symbol: NHS
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  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1978G>A
  hgvsp: ENSP00000369400.3:p.Val660Ile
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Val660Ile
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population: South Asian
  type: Population
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  allele num: 10125
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population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
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X-17744273-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744273
    reference: chr 0
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    type: ExactPosition
    position: 24017744273
    reference: chr 0
allele count: 5
allele frequency: 5.698005698005698e-5
allele num: 87750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
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  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1516G>A
  hgvsp: ENSP00000381170.3:p.Val506Met
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1984G>A
  hgvsp: ENSP00000369400.3:p.Val662Met
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Non-Finnish)
  type: Population
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  allele num: 47987
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population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
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site quality: ReadPosRankSum
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site quality: ClippingRankSum
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X-17744278-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744278
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744278
    reference: chr 0
allele count: 1
allele frequency: 1.139627114008296e-5
allele num: 87748
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1989A>G
  hgvsp: ENST00000380060.3:c.1989A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1521A>G
  hgvsp: ENST00000398097.3:c.1521A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: African
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population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
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population: European (Finnish)
reference allele: A
site quality: VQSLOD
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X-17744286-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744286
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744286
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allele count: 1
allele frequency: 1.139614126656714e-5
allele num: 87749
alternate allele: G
annotation: Annotation
  canonical: true
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  ensembl protein: ENSP00000369400
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  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.1997A>G
  hgvsp: ENSP00000369400.3:p.Tyr666Cys
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
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  gene symbol: NHS
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  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Tyr666Cys
num of homozygotes: 0
population: Other
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  allele num: 632
  num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
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site quality: QD
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site quality: InbreedingCoeff

X-17744293-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744293
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744293
    reference: chr 0
allele count: 1
allele frequency: 1.139588152841563e-5
allele num: 87751
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2004C>T
  hgvsp: ENST00000380060.3:c.2004C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1536C>T
  hgvsp: ENST00000398097.3:c.1536C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Asp668Asp
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population: Latino
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  allele num: 9323
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population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
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site quality: BaseQRankSum
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site quality: FS
site quality: DP
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X-17744294-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744294
    reference: chr 0
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    type: ExactPosition
    position: 24017744294
    reference: chr 0
allele count: 3
allele frequency: 3.418725499133923e-5
allele num: 87752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1537C>T
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  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
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  gene symbol: NHS
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  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
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genotype depth: GenotypeDepth
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population: Latino
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population: Other
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population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
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X-17744304-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744304
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744304
    reference: chr 0
allele count: 1
allele frequency: 1.139575166377974e-5
allele num: 87752
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
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  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2015A>C
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  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
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  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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X-17744307-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744307
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744307
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allele count: 1
allele frequency: 1.139666077839193e-5
allele num: 87745
alternate allele: G
annotation: Annotation
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  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
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  hgvsp: ENSP00000369400.3:p.Val673Gly
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  gene symbol: NHS
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  variant of: http://identifiers.org/hgnc/7820
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val673Gly
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 632
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

X-17744314-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744314
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744314
    reference: chr 0
allele count: 1
allele frequency: 1.139679066374909e-5
allele num: 87744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1557C>T
  hgvsp: ENST00000398097.3:c.1557C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2025C>T
  hgvsp: ENST00000380060.3:c.2025C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 654
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Gly675Gly
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4530
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP

X-17744319-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744319
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744319
    reference: chr 0
allele count: 16
allele frequency: 1.823486506199854e-4
allele num: 87744
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2030G>A
  hgvsp: ENSP00000369400.3:p.Arg677Gln
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1562G>A
  hgvsp: ENSP00000381170.3:p.Arg521Gln
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Arg677Gln
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6638
  num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

X-17744322-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744322
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744322
    reference: chr 0
allele count: 5
allele frequency: 5.698785019033942e-5
allele num: 87738
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1565C>T
  hgvsp: ENSP00000381170.3:p.Ala522Val
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2033C>T
  hgvsp: ENSP00000369400.3:p.Ala678Val
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12402
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala678Val
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10125
  num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-17744324-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744324
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744324
    reference: chr 0
allele count: 1
allele frequency: 1.139886923217217e-5
allele num: 87728
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2035A>G
  hgvsp: ENSP00000369400.3:p.Asn679Asp
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1567A>G
  hgvsp: ENSP00000381170.3:p.Asn523Asp
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asn679Asp
num of homozygotes: 0
population: East Asian
  type: Population
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  allele frequency: 0.0e0
  allele num: 6638
  num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

X-17744345-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744345
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744345
    reference: chr 0
allele count: 2
allele frequency: 2.280423702723966e-5
allele num: 87703
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2056G>A
  hgvsp: ENSP00000369400.3:p.Ala686Thr
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1588G>A
  hgvsp: ENSP00000381170.3:p.Ala530Thr
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 6
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  variant carriers: 0
hgvs: p.Ala686Thr
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6637
  num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ

X-17744345-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744345
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744345
    reference: chr 0
allele count: 29
allele frequency: 3.306614368949751e-4
allele num: 87703
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2056G>T
  hgvsp: ENSP00000369400.3:p.Ala686Ser
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1588G>T
  hgvsp: ENSP00000381170.3:p.Ala530Ser
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8989
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala686Ser
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4530
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

X-17744358-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744358
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744358
    reference: chr 0
allele count: 1
allele frequency: 1.140719109326519e-5
allele num: 87664
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2069A>T
  hgvsp: ENSP00000369400.3:p.Asp690Val
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1601A>T
  hgvsp: ENSP00000381170.3:p.Asp534Val
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asp690Val
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 633
  num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

X-17744377-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744377
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744377
    reference: chr 0
allele count: 2
allele frequency: 2.282219229979232e-5
allele num: 87634
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2088C>T
  hgvsp: ENST00000380060.3:c.2088C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1620C>T
  hgvsp: ENST00000398097.3:c.1620C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8980
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asn696Asn
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4530
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ

X-17744390-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744390
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744390
    reference: chr 0
allele count: 1
allele frequency: 1.141708909896333e-5
allele num: 87588
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2101G>A
  hgvsp: ENSP00000369400.3:p.Glu701Lys
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
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  hgvsp: ENSP00000381170.3:p.Glu545Lys
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Glu701Lys
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8497
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
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site quality: QD

X-17744406-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744406
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744406
    reference: chr 0
allele count: 1
allele frequency: 1.143105360021033e-5
allele num: 87481
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2117A>G
  hgvsp: ENSP00000369400.3:p.His706Arg
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1649A>G
  hgvsp: ENSP00000381170.3:p.His550Arg
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 707
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.His706Arg
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
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  allele num: 8491
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
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site quality: FS
site quality: QD
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X-17744429-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744429
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744429
    reference: chr 0
allele count: 1
allele frequency: 1.145226124898361e-5
allele num: 87319
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1672C>T
  hgvsp: ENSP00000381170.3:p.Arg558Cys
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2140C>T
  hgvsp: ENSP00000369400.3:p.Arg714Cys
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Arg714Cys
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 633
  num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-17744430-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744430
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744430
    reference: chr 0
allele count: 9
allele frequency: 1.030880601117933e-4
allele num: 87304
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1673G>A
  hgvsp: ENSP00000381170.3:p.Arg558His
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2141G>A
  hgvsp: ENSP00000369400.3:p.Arg714His
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Arg714His
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

X-17744444-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744444
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744444
    reference: chr 0
allele count: 1
allele frequency: 1.145645972481584e-5
allele num: 87287
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1687C>T
  hgvsp: ENSP00000381170.3:p.Pro563Ser
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2155C>T
  hgvsp: ENSP00000369400.3:p.Pro719Ser
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Pro719Ser
num of homozygotes: 0
population: Latino
  type: Population
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  allele num: 9323
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population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: MQ
site quality: DP
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X-17744451-G-A
type: Variant
location: Region
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    reference: chr 0
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    type: ExactPosition
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allele count: 3
allele frequency: 3.437449870522721e-5
allele num: 87274
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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population: East Asian
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population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
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X-17744454-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744454
    reference: chr 0
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    type: ExactPosition
    position: 24017744454
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allele count: 1
allele frequency: 1.145842882024017e-5
allele num: 87272
alternate allele: T
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/7820
canonical: true
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hgvs: p.Pro722Leu
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population: African
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population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
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reference allele: C
site quality: FS
site quality: DP
site quality: MQ
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X-17744460-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744460
    reference: chr 0
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allele count: 1
allele frequency: 1.145816623507574e-5
allele num: 87274
alternate allele: A
annotation: Annotation
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  consequence: missense_variant
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  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2171C>A
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  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  ensembl protein: ENSP00000381170
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  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1703C>A
  hgvsp: ENSP00000381170.3:p.Ala568Glu
  variant of: http://identifiers.org/hgnc/7820
canonical: true
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filter: PASS
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hgvs: p.Ala724Glu
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population: East Asian
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population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
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site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
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X-17744460-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744460
    reference: chr 0
  end: Position
    type: ExactPosition
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    reference: chr 0
allele count: 2
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allele num: 87274
alternate allele: T
annotation: Annotation
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  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2171C>T
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  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
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  consequence: missense_variant
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  variant of: http://identifiers.org/hgnc/7820
canonical: true
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ala724Val
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 2
  allele frequency: 4.203976962206247e-5
  allele num: 47574
  num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

X-17744467-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744467
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744467
    reference: chr 0
allele count: 3
allele frequency: 3.437252947444403e-5
allele num: 87279
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2178C>T
  hgvsp: ENST00000380060.3:c.2178C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1710C>T
  hgvsp: ENST00000398097.3:c.1710C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser726Ser
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6634
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

X-17744487-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744487
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744487
    reference: chr 0
allele count: 2
allele frequency: 2.291318195357789e-5
allele num: 87286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1730C>T
  hgvsp: ENSP00000381170.3:p.Thr577Ile
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2198C>T
  hgvsp: ENSP00000369400.3:p.Thr733Ile
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Thr733Ile
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 631
  num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

X-17744490-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744490
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744490
    reference: chr 0
allele count: 1
allele frequency: 1.145527859237537e-5
allele num: 87296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1733G>A
  hgvsp: ENSP00000381170.3:p.Ser578Asn
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2201G>A
  hgvsp: ENSP00000369400.3:p.Ser734Asn
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 576
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genotype depth: GenotypeDepth
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hgvs: p.Ser734Asn
num of homozygotes: 0
population: Latino
  type: Population
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  allele num: 9320
  num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD

X-17744493-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744493
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744493
    reference: chr 0
allele count: 1
allele frequency: 1.145475372279496e-5
allele num: 87300
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2204T>C
  hgvsp: ENSP00000369400.3:p.Met735Thr
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1736T>C
  hgvsp: ENSP00000381170.3:p.Met579Thr
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Met735Thr
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 1.180916391119509e-4
  allele num: 8468
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

X-17744500-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744500
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744500
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 87301
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2211T>G
  hgvsp: ENST00000380060.3:c.2211T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1743T>G
  hgvsp: ENST00000398097.3:c.1743T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Thr737Thr
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4530
  num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
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site quality: DP

X-17744522-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744522
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744522
    reference: chr 0
allele count: 1
allele frequency: 1.144649336675709e-5
allele num: 87363
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1765T>A
  hgvsp: ENSP00000381170.3:p.Ser589Thr
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2233T>A
  hgvsp: ENSP00000369400.3:p.Ser745Thr
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ser745Thr
num of homozygotes: 0
population: East Asian
  type: Population
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  allele frequency: 0.0e0
  allele num: 6630
  num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP

X-17744522-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744522
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744522
    reference: chr 0
allele count: 1
allele frequency: 1.144649336675709e-5
allele num: 87363
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1765T>C
  hgvsp: ENSP00000381170.3:p.Ser589Pro
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2233T>C
  hgvsp: ENSP00000369400.3:p.Ser745Pro
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Ser745Pro
num of homozygotes: 0
population: European (Finnish)
  type: Population
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  allele num: 4530
  num of homozygotes: 0
population: Latino
population: South Asian
population: Other
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population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
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site quality: DP
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X-17744523-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744523
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744523
    reference: chr 0
allele count: 2
allele frequency: 2.289062857666072e-5
allele num: 87372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1766C>T
  hgvsp: ENSP00000381170.3:p.Ser589Phe
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2234C>T
  hgvsp: ENSP00000369400.3:p.Ser745Phe
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Ser745Phe
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10120
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

X-17744538-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744538
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744538
    reference: chr 0
allele count: 1
allele frequency: 1.143615196358729e-5
allele num: 87442
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2249C>T
  hgvsp: ENSP00000369400.3:p.Ala750Val
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1781C>T
  hgvsp: ENSP00000381170.3:p.Ala594Val
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ala750Val
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9319
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ

X-17744539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744539
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744539
    reference: chr 0
allele count: 3
allele frequency: 3.429394483247408e-5
allele num: 87479
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1782G>A
  hgvsp: ENST00000398097.3:c.1782G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2250G>A
  hgvsp: ENST00000380060.3:c.2250G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ala750Ala
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4530
  num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

X-17744556-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744556
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744556
    reference: chr 0
allele count: 80
allele frequency: 9.132628598826457e-4
allele num: 87598
alternate allele: C
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1799T>C
  hgvsp: ENSP00000381170.3:p.Phe600Ser
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2267T>C
  hgvsp: ENSP00000369400.3:p.Phe756Ser
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 79
hgvs: p.Phe756Ser
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

X-17744568-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744568
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744568
    reference: chr 0
allele count: 5
allele frequency: 5.704441478134876e-5
allele num: 87651
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2279C>T
  hgvsp: ENSP00000369400.3:p.Thr760Met
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1811C>T
  hgvsp: ENSP00000381170.3:p.Thr604Met
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8994
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Thr760Met
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9318
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

X-17744569-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744569
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744569
    reference: chr 0
allele count: 1
allele frequency: 1.140836232958759e-5
allele num: 87655
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1812G>A
  hgvsp: ENST00000398097.3:c.1812G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2280G>A
  hgvsp: ENST00000380060.3:c.2280G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 55
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
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  variant carriers: 0
hgvs: p.Thr760Thr
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9317
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

X-17744577-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744577
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744577
    reference: chr 0
allele count: 1
allele frequency: 1.140445914352512e-5
allele num: 87685
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2288A>G
  hgvsp: ENSP00000369400.3:p.Tyr763Cys
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1820A>G
  hgvsp: ENSP00000381170.3:p.Tyr607Cys
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 10070
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hgvs: p.Tyr763Cys
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8509
  num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

X-17744616-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744616
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744616
    reference: chr 0
allele count: 2
allele frequency: 2.280449704681763e-5
allele num: 87702
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2327A>G
  hgvsp: ENSP00000369400.3:p.Asn776Ser
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1859A>G
  hgvsp: ENSP00000381170.3:p.Asn620Ser
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asn776Ser
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8512
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

X-17744625-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744625
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744625
    reference: chr 0
allele count: 1
allele frequency: 1.140146850914398e-5
allele num: 87708
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2336A>G
  hgvsp: ENSP00000369400.3:p.Tyr779Cys
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1868A>G
  hgvsp: ENSP00000381170.3:p.Tyr623Cys
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 17
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hgvs: p.Tyr779Cys
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4530
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-17744655-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744655
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744655
    reference: chr 0
allele count: 1
allele frequency: 1.139912910653626e-5
allele num: 87726
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1898A>G
  hgvsp: ENSP00000381170.3:p.Glu633Gly
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2366A>G
  hgvsp: ENSP00000369400.3:p.Glu789Gly
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12368
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 788
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35413
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu789Gly
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9320
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD

X-17744659-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744659
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744659
    reference: chr 0
allele count: 6
allele frequency: 6.839633395649993e-5
allele num: 87724
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1902T>C
  hgvsp: ENST00000398097.3:c.1902T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2370T>C
  hgvsp: ENST00000380060.3:c.2370T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 4
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 724
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asn790Asn
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8516
  num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

X-17744664-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24017744664
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24017744664
    reference: chr 0
allele count: 1
allele frequency: 1.140068860159154e-5
allele num: 87714
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000369400
  ensembl transcript: ENST00000380060
  gene symbol: NHS
  hgvsc: ENST00000380060.3:c.2375A>G
  hgvsp: ENSP00000369400.3:p.Gln792Arg
  variant of: http://identifiers.org/hgnc/7820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188158
  ensembl protein: ENSP00000381170
  ensembl transcript: ENST00000398097
  gene symbol: NHS
  hgvsc: ENST00000398097.3:c.1907A>G
  hgvsp: ENSP00000381170.3:p.Gln636Arg
  variant of: http://identifiers.org/hgnc/7820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
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genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2479
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln792Arg
num of homozygotes: 0
reference allele: A

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.175640724194686e-4
allele num: 8506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6629
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47903
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

VQSLOD
type: SiteQuality
SIO_000300: 2.82e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.170939e6

QD
type: SiteQuality
SIO_000300: 1.478e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8505
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.882399446585631e-5
allele num: 10119
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.37e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.81e-2

DP
type: SiteQuality
SIO_000300: 2.170957e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8507
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47915
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 6.918363312907689e-4
allele num: 10118
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.421e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.42e-1

DP
type: SiteQuality
SIO_000300: 2.171293e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.850000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.34e-1

FS
type: SiteQuality
SIO_000300: 1.134e0

Latino
type: Population
allele count: 1
allele frequency: 1.072616110693983e-4
allele num: 9323
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 1.293052780063477e-3
allele num: 8507
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.884353069091628e-5
allele num: 10117
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47918
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

FS
type: SiteQuality
SIO_000300: 2.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.889e-1

QD
type: SiteQuality
SIO_000300: 1.658e1

DP
type: SiteQuality
SIO_000300: 2.171344e6

MQ
type: SiteQuality
SIO_000300: 5.983e1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8507
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.173622704507513e-5
allele num: 47920
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.14e-2

DP
type: SiteQuality
SIO_000300: 2.171159e6

MQ
type: SiteQuality
SIO_000300: 5.91e1

VQSLOD
type: SiteQuality
SIO_000300: -1.308e0

MQRankSum
type: SiteQuality
SIO_000300: -7.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

QD
type: SiteQuality
SIO_000300: 1.229e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

Latino
type: Population
allele count: 52
allele frequency: 5.578202102553101e-3
allele num: 9322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6629
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47922
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.686e1

VQSLOD
type: SiteQuality
SIO_000300: 1.404e1

DP
type: SiteQuality
SIO_000300: 2.17211e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.362e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.968e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47919
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.175640724194686e-4
allele num: 8506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.168293e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.25e-2

QD
type: SiteQuality
SIO_000300: 2.639e1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.086680716983494e-5
allele num: 47923
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10119
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8507
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.398e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.266e0

MQ
type: SiteQuality
SIO_000300: 5.325e1

VQSLOD
type: SiteQuality
SIO_000300: -2.734e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.31e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.797e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

QD
type: SiteQuality
SIO_000300: 3.293e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 2.168386e6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.460402236501711e-4
allele num: 47932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.39e0

VQSLOD
type: SiteQuality
SIO_000300: 3.69e0

FS
type: SiteQuality
SIO_000300: 1.804e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.320000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 2.054e1

DP
type: SiteQuality
SIO_000300: 2.168753e6

African
type: Population
allele count: 3
allele frequency: 3.527336860670194e-4
allele num: 8505
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47931
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.33e-1

FS
type: SiteQuality
SIO_000300: 1.815e0

DP
type: SiteQuality
SIO_000300: 2.168626e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.269e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.68e-2

QD
type: SiteQuality
SIO_000300: 1.857e1

VQSLOD
type: SiteQuality
SIO_000300: 5.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.75e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 19
allele frequency: 2.234242709313264e-3
allele num: 8504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.086245384182088e-5
allele num: 47933
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.99e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

MQRankSum
type: SiteQuality
SIO_000300: 4.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.91e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-1

DP
type: SiteQuality
SIO_000300: 2.169175e6

QD
type: SiteQuality
SIO_000300: 1.394e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10119
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47945
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.507840772014475e-4
allele num: 6632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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ReadPosRankSum
type: SiteQuality
SIO_000300: -5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

QD
type: SiteQuality
SIO_000300: 1.371e1

DP
type: SiteQuality
SIO_000300: 2.168911e6

MQRankSum
type: SiteQuality
SIO_000300: 1.48e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.83e-2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.085810232985003e-5
allele num: 47943
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.85e-2

DP
type: SiteQuality
SIO_000300: 2.168168e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.81e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.469e0

QD
type: SiteQuality
SIO_000300: 2.949e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8503
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10119
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47933
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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DP
type: SiteQuality
SIO_000300: 2.167343e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 3.935e0

VQSLOD
type: SiteQuality
SIO_000300: -1.741e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.325e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.534e0

MQRankSum
type: SiteQuality
SIO_000300: 9.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.87e-2

QD
type: SiteQuality
SIO_000300: 2.001e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.087029114056141e-5
allele num: 47915
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10119
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.49e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

QD
type: SiteQuality
SIO_000300: 2.432e1

FS
type: SiteQuality
SIO_000300: 1.84e0

VQSLOD
type: SiteQuality
SIO_000300: -2.137e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.01e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

DP
type: SiteQuality
SIO_000300: 2.16785e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10117
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.091044058298308e-5
allele num: 47823
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.251e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.53e-2

DP
type: SiteQuality
SIO_000300: 2.165346e6

MQ
type: SiteQuality
SIO_000300: 5.895e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.209e0

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

FS
type: SiteQuality
SIO_000300: 2.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.227e0

QD
type: SiteQuality
SIO_000300: 2.416e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.55e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-2

DP
type: SiteQuality
SIO_000300: 2.163723e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.26e-1

FS
type: SiteQuality
SIO_000300: 5.698e0

QD
type: SiteQuality
SIO_000300: 2.115e1

MQ
type: SiteQuality
SIO_000300: 5.936e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.703e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.28e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.176747469992939e-4
allele num: 8498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.846e0

QD
type: SiteQuality
SIO_000300: 7.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.23e0

VQSLOD
type: SiteQuality
SIO_000300: -2.783e0

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQ
type: SiteQuality
SIO_000300: 5.895e1

DP
type: SiteQuality
SIO_000300: 2.165735e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.833e0

FS
type: SiteQuality
SIO_000300: 2.624e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47909
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.072961373390558e-4
allele num: 9320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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BaseQRankSum
type: SiteQuality
SIO_000300: -6.661e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.147e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.733e0

MQRankSum
type: SiteQuality
SIO_000300: 1.44e0

DP
type: SiteQuality
SIO_000300: 2.166087e6

FS
type: SiteQuality
SIO_000300: 3.856e0

QD
type: SiteQuality
SIO_000300: 1.49e1

MQ
type: SiteQuality
SIO_000300: 5.902e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9321
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.174e0

QD
type: SiteQuality
SIO_000300: 1.326e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.458e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.86e-1

MQ
type: SiteQuality
SIO_000300: 5.781e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.37e0

DP
type: SiteQuality
SIO_000300: 2.167267e6

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47932
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.351005054660868e-4
allele num: 8507
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

QD
type: SiteQuality
SIO_000300: 1.662e1

DP
type: SiteQuality
SIO_000300: 2.168474e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.237e0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

African
type: Population
allele count: 6
allele frequency: 7.052186177715092e-4
allele num: 8508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.207505518763797e-4
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 10117
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.264e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.47e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.71e-1

QD
type: SiteQuality
SIO_000300: 2.134e1

DP
type: SiteQuality
SIO_000300: 2.169876e6

MQ
type: SiteQuality
SIO_000300: 5.939e1

FS
type: SiteQuality
SIO_000300: 4.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

MQRankSum
type: SiteQuality
SIO_000300: -8.9e-2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8511
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.172490768364175e-5
allele num: 47933
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.072731173567904e-4
allele num: 9322
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.761e0

MQRankSum
type: SiteQuality
SIO_000300: 1.79e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.992e1

FS
type: SiteQuality
SIO_000300: 1.115e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.76e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.75e-1

DP
type: SiteQuality
SIO_000300: 2.170016e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10117
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.258736152546263e-5
allele num: 47933
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8511
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.992e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.76e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.761e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.75e-1

FS
type: SiteQuality
SIO_000300: 1.115e0

MQRankSum
type: SiteQuality
SIO_000300: 1.79e0

DP
type: SiteQuality
SIO_000300: 2.170016e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.12e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.344459279038718e-5
allele num: 47936
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.506931886678722e-4
allele num: 6636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.121e1

FS
type: SiteQuality
SIO_000300: 1.145e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.320000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.84e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: 2.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.95e-1

DP
type: SiteQuality
SIO_000300: 2.170403e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.174950064622254e-4
allele num: 8511
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.236e0

DP
type: SiteQuality
SIO_000300: 2.170767e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.304e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.215e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.405e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.45e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47953
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.174812030075188e-4
allele num: 8512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.594e0

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

DP
type: SiteQuality
SIO_000300: 2.171209e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e0

QD
type: SiteQuality
SIO_000300: 1.477e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47953
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.072731173567904e-4
allele num: 9322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 2.171209e6

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e0

FS
type: SiteQuality
SIO_000300: 2.594e0

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.84e-1

QD
type: SiteQuality
SIO_000300: 1.477e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.506931886678722e-4
allele num: 6636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.172167e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.73e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.284e0

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

FS
type: SiteQuality
SIO_000300: 9.176e0

VQSLOD
type: SiteQuality
SIO_000300: -3.257e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.97e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.911e0

QD
type: SiteQuality
SIO_000300: 1.866e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

African
type: Population
allele count: 17
allele frequency: 1.997180451127819e-3
allele num: 8512
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47971
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.9e-2

DP
type: SiteQuality
SIO_000300: 2.173484e6

FS
type: SiteQuality
SIO_000300: 5.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.08e0

MQRankSum
type: SiteQuality
SIO_000300: 1.14e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.619e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.612e-1

QD
type: SiteQuality
SIO_000300: 1.653e1

African
type: Population
allele count: 1
allele frequency: 1.174674027957242e-4
allele num: 8513
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.45900204260286e-4
allele num: 47978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.944e1

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.96e-1

DP
type: SiteQuality
SIO_000300: 2.174342e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 5.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.393e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.72e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47979
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.072616110693983e-4
allele num: 9323
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.115e1

DP
type: SiteQuality
SIO_000300: 2.173239e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.17e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: -2.462e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.029e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.85e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.174398120963006e-4
allele num: 8515
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.943e0

FS
type: SiteQuality
SIO_000300: 1.867e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.34e-1

DP
type: SiteQuality
SIO_000300: 2.173562e6

QD
type: SiteQuality
SIO_000300: 2.353e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

QD
type: SiteQuality
SIO_000300: 2.637e1

VQSLOD
type: SiteQuality
SIO_000300: 1.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.3e-2

FS
type: SiteQuality
SIO_000300: 2.302e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.04e-1

DP
type: SiteQuality
SIO_000300: 2.173716e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.663e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47987
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 3.285e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.117e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

DP
type: SiteQuality
SIO_000300: 2.173789e6

FS
type: SiteQuality
SIO_000300: 0.0e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 4.938271604938272e-4
allele num: 10125
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.004e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 1.697e1

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.164e-1

DP
type: SiteQuality
SIO_000300: 2.174451e6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084028009336445e-5
allele num: 47984
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 1.1902e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.695e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 2.173777e6

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e0

QD
type: SiteQuality
SIO_000300: 1.307e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084071441969031e-5
allele num: 47983
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.03e0

DP
type: SiteQuality
SIO_000300: 2.173676e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

QD
type: SiteQuality
SIO_000300: 3.083e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.655e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47985
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.876543209876543e-5
allele num: 10125
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.098e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

QD
type: SiteQuality
SIO_000300: 1.226e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.964e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e0

FS
type: SiteQuality
SIO_000300: 9.628e0

DP
type: SiteQuality
SIO_000300: 2.173816e6

MQRankSum
type: SiteQuality
SIO_000300: 7.5e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.441e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.251823448505815e-5
allele num: 47986
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.074e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.185e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.223e0

FS
type: SiteQuality
SIO_000300: 5.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

QD
type: SiteQuality
SIO_000300: 1.761e1

VQSLOD
type: SiteQuality
SIO_000300: -8.275e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

DP
type: SiteQuality
SIO_000300: 2.174281e6

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.083941149501938e-5
allele num: 47986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.68e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.75e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.82e-1

FS
type: SiteQuality
SIO_000300: 3.676e0

DP
type: SiteQuality
SIO_000300: 2.174027e6

QD
type: SiteQuality
SIO_000300: 1.767e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.927e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084028009336445e-5
allele num: 47984
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.34e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.39e0

QD
type: SiteQuality
SIO_000300: 1.244e1

DP
type: SiteQuality
SIO_000300: 2.173962e6

FS
type: SiteQuality
SIO_000300: 4.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

VQSLOD
type: SiteQuality
SIO_000300: 7.48e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47982
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.072616110693983e-4
allele num: 9323
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.994e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.929e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

FS
type: SiteQuality
SIO_000300: 6.003e0

QD
type: SiteQuality
SIO_000300: 1.075e1

DP
type: SiteQuality
SIO_000300: 2.174011e6

African
type: Population
allele count: 12
allele frequency: 1.409443269908386e-3
allele num: 8514
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.217848332081948e-4
allele num: 9323
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.08415831266543e-5
allele num: 47981
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.649e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.551e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

QD
type: SiteQuality
SIO_000300: 1.794e1

DP
type: SiteQuality
SIO_000300: 2.175657e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.08437552109388e-5
allele num: 47976
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.290464442775931e-4
allele num: 9323
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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DP
type: SiteQuality
SIO_000300: 2.174389e6

FS
type: SiteQuality
SIO_000300: 4.067e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.55e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.653e0

QD
type: SiteQuality
SIO_000300: 1.405e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084636230977694e-5
allele num: 47970
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.173595e6

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.06e0

FS
type: SiteQuality
SIO_000300: 2.048e0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.9e-2

QD
type: SiteQuality
SIO_000300: 1.287e1

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.17e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8507
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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South Asian
type: Population
allele count: 2
allele frequency: 1.975308641975309e-4
allele num: 10125
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47948
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.176611e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.639e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.766e1

MQRankSum
type: SiteQuality
SIO_000300: -2.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.718e-1

FS
type: SiteQuality
SIO_000300: 5.35e-1

QD
type: SiteQuality
SIO_000300: 2.004e1

MQ
type: SiteQuality
SIO_000300: 5.952e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47948
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8507
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

East Asian
type: Population
allele count: 29
allele frequency: 4.369444025915323e-3
allele num: 6637
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.639e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

DP
type: SiteQuality
SIO_000300: 2.176611e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.718e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

FS
type: SiteQuality
SIO_000300: 5.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.766e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

QD
type: SiteQuality
SIO_000300: 2.004e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.087203356222997e-5
allele num: 47911
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.171713e6

VQSLOD
type: SiteQuality
SIO_000300: -2.691e0

MQRankSum
type: SiteQuality
SIO_000300: 6.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.082e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.15e-1

QD
type: SiteQuality
SIO_000300: 3.258e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.217e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47883
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.145232221387965e-4
allele num: 9323
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.170633e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.75e-1

QD
type: SiteQuality
SIO_000300: 1.157e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.756e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

FS
type: SiteQuality
SIO_000300: 2.586e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.09003887472307e-5
allele num: 47846
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

DP
type: SiteQuality
SIO_000300: 2.169309e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.14e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.68e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.526e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 1.287e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.877518767285657e-5
allele num: 10124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47746
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.85e-2

DP
type: SiteQuality
SIO_000300: 2.167709e6

MQ
type: SiteQuality
SIO_000300: 5.883e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

VQSLOD
type: SiteQuality
SIO_000300: -2.487e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.07e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.897e1

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10123
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.508068164681044e-4
allele num: 6631
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47611
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.166366e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.58e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.716e0

QD
type: SiteQuality
SIO_000300: 2.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.52e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.06e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10119
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 9.047044632086852e-4
allele num: 6632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.361275088547816e-4
allele num: 8470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.100884472362865e-5
allele num: 47599
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.291e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.426e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.77e-1

FS
type: SiteQuality
SIO_000300: 1.769e0

DP
type: SiteQuality
SIO_000300: 2.166814e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.88e-2

QD
type: SiteQuality
SIO_000300: 1.961e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10121
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.101458412138024e-5
allele num: 47586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.165162e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.45e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.559e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.23e-1

QD
type: SiteQuality
SIO_000300: 1.751e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.975503753457131e-4
allele num: 10124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.101988481103124e-5
allele num: 47574
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

QD
type: SiteQuality
SIO_000300: 2.685e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.1e-1

FS
type: SiteQuality
SIO_000300: 1.9731e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.94e-1

DP
type: SiteQuality
SIO_000300: 2.164966e6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.878494517435543e-5
allele num: 10123
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.164727e6

MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 3.224e1

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.64e-2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47574
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.879470460383324e-5
allele num: 10122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.992e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.254e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

QD
type: SiteQuality
SIO_000300: 1.736e1

DP
type: SiteQuality
SIO_000300: 2.164858e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

MQ
type: SiteQuality
SIO_000300: 5.992e1

VQSLOD
type: SiteQuality
SIO_000300: 5.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.254e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e-1

DP
type: SiteQuality
SIO_000300: 2.164858e6

QD
type: SiteQuality
SIO_000300: 1.736e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47578
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South Asian
type: Population
allele count: 3
allele frequency: 2.963841138114997e-4
allele num: 10122
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

FS
type: SiteQuality
SIO_000300: 3.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.340000000000001e-1

QD
type: SiteQuality
SIO_000300: 2.067e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.98e-2

DP
type: SiteQuality
SIO_000300: 2.164625e6

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.976089319237229e-4
allele num: 10121
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.81e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.164928e6

QD
type: SiteQuality
SIO_000300: 3.148e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.91e-2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.101149328682789e-5
allele num: 47593
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10123
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.73e0

FS
type: SiteQuality
SIO_000300: 2.4587e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.598e0

DP
type: SiteQuality
SIO_000300: 2.165147e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.902e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 1.681e1

MQ
type: SiteQuality
SIO_000300: 5.803e1

VQSLOD
type: SiteQuality
SIO_000300: -5.893e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47597
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10123
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

FS
type: SiteQuality
SIO_000300: 1.293e0

VQSLOD
type: SiteQuality
SIO_000300: 4.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.299e0

DP
type: SiteQuality
SIO_000300: 2.164966e6

QD
type: SiteQuality
SIO_000300: 1.476e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10123
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8467
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47599
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.211e0

MQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.05e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

VQSLOD
type: SiteQuality
SIO_000300: -3.255e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 1.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.87e-1

DP
type: SiteQuality
SIO_000300: 2.164696e6

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8469
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.098019469620678e-5
allele num: 47664
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.08e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

VQSLOD
type: SiteQuality
SIO_000300: -1.459e0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

FS
type: SiteQuality
SIO_000300: 8.635e0

QD
type: SiteQuality
SIO_000300: 2.16e1

DP
type: SiteQuality
SIO_000300: 2.165398e6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
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Other
type: Population
allele count: 1
allele frequency: 1.584786053882726e-3
allele num: 631
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8469
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47664
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.16e1

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

FS
type: SiteQuality
SIO_000300: 8.635e0

VQSLOD
type: SiteQuality
SIO_000300: -1.459e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.08e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

DP
type: SiteQuality
SIO_000300: 2.165398e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.05e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47670
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.01659125188537e-4
allele num: 6630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.057e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.165347e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.83e-1

QD
type: SiteQuality
SIO_000300: 1.346e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.38e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
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allele count: 0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.179523472517103e-4
allele num: 8478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.657e0

QD
type: SiteQuality
SIO_000300: 1.201e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.127e0

DP
type: SiteQuality
SIO_000300: 2.166431e6

VQSLOD
type: SiteQuality
SIO_000300: 5.72e-1

FS
type: SiteQuality
SIO_000300: 1.105e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

Other
type: Population
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allele num: 631
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9317
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.093276396215356e-5
allele num: 47772
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.976284584980237e-4
allele num: 10120
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

FS
type: SiteQuality
SIO_000300: 7.383e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.461e-1

DP
type: SiteQuality
SIO_000300: 2.166861e6

QD
type: SiteQuality
SIO_000300: 2.997e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.352387673488591e-4
allele num: 8502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.2927666881305e-4
allele num: 9318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 8.830022075055188e-4
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 70
allele frequency: 1.462446464013371e-3
allele num: 47865
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.942e1

DP
type: SiteQuality
SIO_000300: 2.173729e6

VQSLOD
type: SiteQuality
SIO_000300: 2.082e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.19e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.938e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.92e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.881422924901186e-5
allele num: 10120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.351005054660868e-4
allele num: 8507
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.174406712445993e-5
allele num: 47911
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.554e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.74e-1

DP
type: SiteQuality
SIO_000300: 2.165348e6

QD
type: SiteQuality
SIO_000300: 1.307e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.47e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.086767805346299e-5
allele num: 47921
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8505
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

MQ
type: SiteQuality
SIO_000300: 5.991e1

DP
type: SiteQuality
SIO_000300: 2.165448e6

QD
type: SiteQuality
SIO_000300: 1.337e1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.61e-1

FS
type: SiteQuality
SIO_000300: 1.102e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.26e-2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.085853739935756e-5
allele num: 47942
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 2.165688e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.1e0

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.35e0

FS
type: SiteQuality
SIO_000300: 5.947e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.93e-1

QD
type: SiteQuality
SIO_000300: 1.243e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47956
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.976284584980237e-4
allele num: 10120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.460000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -1.324e0

QD
type: SiteQuality
SIO_000300: 2.058e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.47e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

DP
type: SiteQuality
SIO_000300: 2.165941e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.88e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.62e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47957
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.174812030075188e-4
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 1.672e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.98e-1

DP
type: SiteQuality
SIO_000300: 2.165984e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.62e0

VQSLOD
type: SiteQuality
SIO_000300: 1.27e-1

FS
type: SiteQuality
SIO_000300: 1.151e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47970
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.878494517435543e-5
allele num: 10123
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.166823e6

MQ
type: SiteQuality
SIO_000300: 5.92e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.759999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.455e1

VQSLOD
type: SiteQuality
SIO_000300: 4.95e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10123
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.250859966226781e-4
allele num: 47967
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.345e1

VQSLOD
type: SiteQuality
SIO_000300: 4.99e0

FS
type: SiteQuality
SIO_000300: 3.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.23e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.35e-1

DP
type: SiteQuality
SIO_000300: 2.167236e6

MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.193e-1