19-10788005-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10788005
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10788005
    reference: chr 19
allele count: 1
allele frequency: 8.322375538873816e-6
allele num: 120158
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.559+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.559+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*141+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.559+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*141+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.559+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.559+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.559+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.559+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.203+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.559+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.98-1324G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.559+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.833+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.559+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.106+19G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.360+19G>A
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9838
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

19-10788007-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10788007
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10788007
    reference: chr 19
allele count: 8
allele frequency: 6.663002015558109e-5
allele num: 120066
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.833+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.203+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.559+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*141+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.106+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.559+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*141+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.559+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.559+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.559+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.559+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.360+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.559+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.559+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.559+21C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.98-1322C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.559+21C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8044
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6081
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9778
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

19-10788008-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10788008
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10788008
    reference: chr 19
allele count: 6
allele frequency: 4.99850044986504e-5
allele num: 120036
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.559+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.98-1321G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.559+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.559+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.559+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.203+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.559+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*141+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.559+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.559+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.559+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.360+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*141+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.106+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.833+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.559+22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.559+22G>A
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

19-10788012-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10788012
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10788012
    reference: chr 19
allele count: 1
allele frequency: 8.338753523123364e-6
allele num: 119922
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.559+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.559+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.360+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.559+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.559+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.559+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.559+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.559+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.559+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.559+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.203+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*141+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.833+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*141+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.559+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.106+26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.98-1317G>A
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4084
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6076
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-10788026-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10788026
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10788026
    reference: chr 19
allele count: 1
allele frequency: 8.377314233056882e-6
allele num: 119370
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*141+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.559+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.559+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.203+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.559+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.106+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.360+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.559+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.559+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.98-1303T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.559+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.559+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.559+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*141+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.559+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.833+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.559+40T>C
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6057
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8003
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-10788033-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10788033
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10788033
    reference: chr 19
allele count: 1
allele frequency: 8.414533582403528e-6
allele num: 118842
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.559+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.98-1296C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.203+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.559+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.360+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.559+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.559+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*141+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.833+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.559+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.559+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.559+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.559+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.559+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.559+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*141+47C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.106+47C>A
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2746
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6047
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

19-10788033-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10788033
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10788033
    reference: chr 19
allele count: 4
allele frequency: 3.365813432961411e-5
allele num: 118842
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.559+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.559+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.559+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.559+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.98-1296C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.360+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.559+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*141+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.559+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.833+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.203+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.559+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*141+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.559+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.559+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.106+47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.559+47C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

19-10788035-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10788035
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10788035
    reference: chr 19
allele count: 3
allele frequency: 2.52674134591089e-5
allele num: 118730
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.98-1294C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.559+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.559+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.559+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.106+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.559+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.559+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.833+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*141+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.559+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.559+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.559+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.203+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.559+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.559+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.360+49C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*141+49C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6039
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

19-10789259-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789259
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789259
    reference: chr 19
allele count: 33
allele frequency: 2.726731887890005e-4
allele num: 121024
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*142-30G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.560-30G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.560-30G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.560-30G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.834-30G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-514G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-514G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.98-70G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.560-30G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.204-30G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.560-30G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.560-30G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.560-30G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.560-30G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-514G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.560-30G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.560-30G>A
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13468
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

19-10789281-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789281
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789281
    reference: chr 19
allele count: 2
allele frequency: 1.649402916144356e-5
allele num: 121256
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.560-8A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.204-8A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.560-8A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.560-8A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.560-8A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.560-8A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.98-48A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.560-8A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.560-8A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.560-8A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.560-8A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*142-8A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-492A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.834-8A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-492A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.560-8A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-492A>G
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.560-8A>G
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-10789313-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789313
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789313
    reference: chr 19
allele count: 3
allele frequency: 2.472147142197904e-5
allele num: 121352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.584C>T
  hgvsp: ENSP00000465515.1:p.Pro195Leu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.584C>T
  hgvsp: ENSP00000468156.1:p.Pro195Leu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.584C>T
  hgvsp: ENSP00000315205.3:p.Pro195Leu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.228C>T
  hgvsp: ENSP00000467950.1:p.Pro77Leu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-460C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.584C>T
  hgvsp: ENSP00000465654.1:p.Pro195Leu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-460C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.584C>T
  hgvsp: ENSP00000405436.1:p.Pro195Leu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.584C>T
  hgvsp: ENSP00000468181.1:p.Pro195Leu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.584C>T
  hgvsp: ENSP00000250241.8:p.Pro195Leu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.584C>T
  hgvsp: ENSP00000384660.2:p.Pro195Leu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.584C>T
  hgvsp: ENSP00000404121.1:p.Pro195Leu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.98-16C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-460C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.858C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.584C>T
  hgvsp: ENSP00000465219.1:p.Pro195Leu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*166C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5355
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23055
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro195Leu
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

19-10789317-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789317
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789317
    reference: chr 19
allele count: 4
allele frequency: 3.296087544085171e-5
allele num: 121356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.862C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.588C>T
  hgvsp: ENST00000588657.1:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.232C>T
  hgvsp: ENST00000585835.1:c.232C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.588C>T
  hgvsp: ENST00000590261.1:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.588C>T
  hgvsp: ENST00000590009.1:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-456C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.588C>T
  hgvsp: ENST00000420083.1:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.588C>T
  hgvsp: ENST00000250241.8:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.588C>T
  hgvsp: ENST00000318511.3:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.588C>T
  hgvsp: ENST00000589998.1:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.588C>T
  hgvsp: ENST00000449870.1:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.588C>T
  hgvsp: ENST00000592763.1:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.98-12C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.588C>T
  hgvsp: ENST00000407004.3:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-456C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*170C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-456C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp196Asp
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP

19-10789319-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789319
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789319
    reference: chr 19
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.590T>G
  hgvsp: ENSP00000468156.1:p.Val197Gly
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.590T>G
  hgvsp: ENSP00000465219.1:p.Val197Gly
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.590T>G
  hgvsp: ENSP00000384660.2:p.Val197Gly
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.590T>G
  hgvsp: ENSP00000465654.1:p.Val197Gly
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.234T>G
  hgvsp: ENSP00000467950.1:p.Val79Gly
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*172T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.590T>G
  hgvsp: ENSP00000250241.8:p.Val197Gly
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-454T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-454T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.590T>G
  hgvsp: ENSP00000404121.1:p.Val197Gly
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.590T>G
  hgvsp: ENSP00000465515.1:p.Val197Gly
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.590T>G
  hgvsp: ENSP00000315205.3:p.Val197Gly
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.864T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-454T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.98-10T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.590T>G
  hgvsp: ENSP00000405436.1:p.Val197Gly
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.590T>G
  hgvsp: ENSP00000468181.1:p.Val197Gly
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23069
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5354
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val197Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-10789333-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789333
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789333
    reference: chr 19
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*186A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.604A>G
  hgvsp: ENSP00000315205.3:p.Lys202Glu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.604A>G
  hgvsp: ENSP00000465219.1:p.Lys202Glu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.604A>G
  hgvsp: ENSP00000405436.1:p.Lys202Glu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-440A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-440A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.878A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.604A>G
  hgvsp: ENSP00000468156.1:p.Lys202Glu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.604A>G
  hgvsp: ENSP00000465654.1:p.Lys202Glu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.248A>G
  hgvsp: ENSP00000467950.1:p.Lys84Glu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.604A>G
  hgvsp: ENSP00000384660.2:p.Lys202Glu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.604A>G
  hgvsp: ENSP00000404121.1:p.Lys202Glu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.102A>G
  hgvsp: ENST00000587840.1:c.102A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.604A>G
  hgvsp: ENSP00000250241.8:p.Lys202Glu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.604A>G
  hgvsp: ENSP00000465515.1:p.Lys202Glu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-440A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.604A>G
  hgvsp: ENSP00000468181.1:p.Lys202Glu
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23082
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys202Glu
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

19-10789339-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789339
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789339
    reference: chr 19
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.610C>T
  hgvsp: ENSP00000315205.3:p.Leu204Phe
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.610C>T
  hgvsp: ENSP00000468181.1:p.Leu204Phe
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.610C>T
  hgvsp: ENSP00000465219.1:p.Leu204Phe
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-434C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-434C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.610C>T
  hgvsp: ENSP00000384660.2:p.Leu204Phe
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.610C>T
  hgvsp: ENSP00000250241.8:p.Leu204Phe
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.884C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.610C>T
  hgvsp: ENSP00000468156.1:p.Leu204Phe
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.610C>T
  hgvsp: ENSP00000465654.1:p.Leu204Phe
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.610C>T
  hgvsp: ENSP00000405436.1:p.Leu204Phe
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.610C>T
  hgvsp: ENSP00000465515.1:p.Leu204Phe
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.610C>T
  hgvsp: ENSP00000404121.1:p.Leu204Phe
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-434C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.108C>T
  hgvsp: ENST00000587840.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.254C>T
  hgvsp: ENSP00000467950.1:p.Leu86Phe
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*192C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu204Phe
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

19-10789356-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789356
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789356
    reference: chr 19
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.627C>T
  hgvsp: ENST00000592763.1:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.125C>T
  hgvsp: ENSP00000467704.1:p.Pro42Leu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.627C>T
  hgvsp: ENST00000250241.8:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-417C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.627C>T
  hgvsp: ENST00000420083.1:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.627C>T
  hgvsp: ENST00000318511.3:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.627C>T
  hgvsp: ENST00000590261.1:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.901C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.627C>T
  hgvsp: ENST00000588657.1:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.627C>T
  hgvsp: ENST00000590009.1:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-417C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-417C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.627C>T
  hgvsp: ENST00000407004.3:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.627C>T
  hgvsp: ENST00000449870.1:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*209C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.627C>T
  hgvsp: ENST00000589998.1:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.271C>T
  hgvsp: ENST00000585835.1:c.271C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5345
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro42Leu
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-10789359-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789359
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789359
    reference: chr 19
allele count: 5
allele frequency: 4.122215443467937e-5
allele num: 121294
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.630C>G
  hgvsp: ENST00000250241.8:c.630C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-414C>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.630C>G
  hgvsp: ENST00000318511.3:c.630C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.630C>G
  hgvsp: ENST00000407004.3:c.630C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.630C>G
  hgvsp: ENST00000449870.1:c.630C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.128C>G
  hgvsp: ENSP00000467704.1:p.Ser43Cys
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.274C>G
  hgvsp: ENST00000585835.1:c.274C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*212C>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.630C>G
  hgvsp: ENST00000590261.1:c.630C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.630C>G
  hgvsp: ENST00000590009.1:c.630C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.630C>G
  hgvsp: ENST00000592763.1:c.630C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-414C>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.630C>G
  hgvsp: ENST00000588657.1:c.630C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.630C>G
  hgvsp: ENST00000589998.1:c.630C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.630C>G
  hgvsp: ENST00000420083.1:c.630C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.904C>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-414C>G
  variant of: http://identifiers.org/hgnc/6038
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser43Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum

19-10789365-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789365
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789365
    reference: chr 19
allele count: 1
allele frequency: 8.248239000973292e-6
allele num: 121238
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.636C>G
  hgvsp: ENSP00000468156.1:p.His212Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.636C>G
  hgvsp: ENSP00000315205.3:p.His212Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.134C>G
  hgvsp: ENSP00000467704.1:p.Thr45Arg
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.636C>G
  hgvsp: ENSP00000468181.1:p.His212Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.636C>G
  hgvsp: ENSP00000465654.1:p.His212Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.636C>G
  hgvsp: ENSP00000384660.2:p.His212Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.636C>G
  hgvsp: ENSP00000250241.8:p.His212Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-408C>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.636C>G
  hgvsp: ENSP00000465515.1:p.His212Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.910C>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.636C>G
  hgvsp: ENSP00000404121.1:p.His212Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.636C>G
  hgvsp: ENSP00000405436.1:p.His212Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.636C>G
  hgvsp: ENSP00000465219.1:p.His212Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*218C>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.280C>G
  hgvsp: ENSP00000467950.1:p.His94Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-408C>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-408C>G
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His212Gln
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ

19-10789400-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789400
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789400
    reference: chr 19
allele count: 2
allele frequency: 1.658704883227176e-5
allele num: 120576
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.651+20A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-373A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.651+20A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.651+20A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.651+20A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.651+20A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.925+20A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-373A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.149+20A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.651+20A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.651+20A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.295+20A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.651+20A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-373A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.651+20A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.651+20A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*233+20A>G
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13334
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

19-10789406-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789406
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789406
    reference: chr 19
allele count: 1
allele frequency: 8.307165761185599e-6
allele num: 120378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.651+26C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.925+26C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.149+26C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.651+26C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.651+26C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-367C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-367C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.651+26C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.651+26C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.651+26C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.651+26C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*233+26C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.651+26C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.295+26C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-367C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.651+26C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.651+26C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2573
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

19-10789420-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789420
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789420
    reference: chr 19
allele count: 4
allele frequency: 3.3406270356946e-5
allele num: 119738
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.925+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-353T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.651+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*233+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.295+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.651+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.651+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.651+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-353T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.651+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.651+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.651+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.651+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.651+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.149+40T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-353T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.651+40T>C
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8809
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

19-10789422-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789422
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789422
    reference: chr 19
allele count: 3
allele frequency: 2.507229177461681e-5
allele num: 119654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.651+42C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.295+42C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-351C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.651+42C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.651+42C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-351C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.149+42C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.925+42C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.651+42C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.651+42C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.651+42C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.651+42C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.651+42C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*233+42C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.651+42C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.651+42C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-351C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8632
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8792
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

19-10789430-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789430
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789430
    reference: chr 19
allele count: 1
allele frequency: 8.416233230655287e-6
allele num: 118818
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.651+50T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.149+50T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-343T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.651+50T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.295+50T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.651+50T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.925+50T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*233+50T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-343T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.651+50T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.651+50T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.651+50T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.651+50T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.651+50T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-343T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.651+50T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.651+50T>C
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3567
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9477
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

19-10789430-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789430
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789430
    reference: chr 19
allele count: 1
allele frequency: 8.416233230655287e-6
allele num: 118818
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-343T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.651+50T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-343T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.651+50T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.651+50T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.925+50T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.651+50T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-343T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.149+50T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.651+50T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.295+50T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.651+50T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.651+50T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*233+50T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.651+50T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.651+50T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.651+50T>G
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ

19-10789727-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789727
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789727
    reference: chr 19
allele count: 1
allele frequency: 8.258865892535638e-6
allele num: 121082
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.652-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.652-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.296-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.652-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.652-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.652-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.926-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.652-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.652-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.652-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.652-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.150-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*234-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-46C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.652-46C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

19-10789729-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789729
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789729
    reference: chr 19
allele count: 1
allele frequency: 8.257774694875225e-6
allele num: 121098
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.652-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.652-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.652-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.652-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.652-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*234-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.652-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.926-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.150-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.652-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.652-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.296-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.652-44T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.652-44T>C
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13854
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD

19-10789733-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789733
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789733
    reference: chr 19
allele count: 87
allele frequency: 7.186756542426646e-4
allele num: 121056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.652-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.652-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.652-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.652-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.296-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.652-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.652-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.652-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.652-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*234-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.652-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.926-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.652-40C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.150-40C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 26274
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13923
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
num of homozygotes: 1
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

19-10789734-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789734
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789734
    reference: chr 19
allele count: 4
allele frequency: 3.303437226434105e-5
allele num: 121086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.296-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.652-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.652-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.652-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.652-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.652-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.652-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.926-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.652-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*234-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.652-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.652-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.150-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-39G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.652-39G>A
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4072
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

19-10789735-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789735
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789735
    reference: chr 19
allele count: 1
allele frequency: 8.257638315441784e-6
allele num: 121100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.296-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.652-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.652-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.652-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.652-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.926-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.652-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.652-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.652-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.652-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.652-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.652-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*234-38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.150-38G>A
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26435
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

19-10789737-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789737
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789737
    reference: chr 19
allele count: 1
allele frequency: 8.256547442121603e-6
allele num: 121116
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*234-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.652-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.926-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.652-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.652-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.652-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.150-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.652-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.296-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.652-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.652-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.652-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.652-36G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.652-36G>C
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

19-10789741-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789741
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789741
    reference: chr 19
allele count: 1
allele frequency: 8.256138438929344e-6
allele num: 121122
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.652-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.296-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.652-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.926-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.652-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*234-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.652-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.652-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.150-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.652-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.652-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.652-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.652-32C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.652-32C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

19-10789747-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789747
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789747
    reference: chr 19
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.652-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.652-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.652-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.296-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.652-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.652-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.652-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.652-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.926-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.652-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.652-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.150-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.652-26G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*234-26G>A
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13939
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

19-10789750-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789750
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789750
    reference: chr 19
allele count: 2
allele frequency: 1.650491846570278e-5
allele num: 121176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.652-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.652-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*234-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.652-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.926-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.150-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.652-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.652-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.652-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.652-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.652-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.652-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.296-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-23G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.652-23G>A
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum

19-10789752-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789752
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789752
    reference: chr 19
allele count: 3
allele frequency: 2.475615190374808e-5
allele num: 121182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.652-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.926-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.652-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.652-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.652-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*234-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.150-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.652-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.296-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.652-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.652-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.652-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.652-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-21G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.652-21G>A
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD

19-10789752-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789752
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789752
    reference: chr 19
allele count: 1
allele frequency: 8.252050634582693e-6
allele num: 121182
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.652-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.652-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.150-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.652-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.652-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.652-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.652-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.926-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.652-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.652-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.652-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.652-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*234-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.296-21G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-21G>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

19-10789761-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789761
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789761
    reference: chr 19
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.652-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.652-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.150-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.652-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.652-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.652-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.652-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.926-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.652-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.652-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.296-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*234-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.652-12T>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.652-12T>G
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10873
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

19-10789766-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789766
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789766
    reference: chr 19
allele count: 3
allele frequency: 2.474675817467912e-5
allele num: 121228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.652-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.652-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.150-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.652-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.652-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.652-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.652-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.652-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.926-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.296-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.652-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*234-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.652-7C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.652-7C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.652-7C>T
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-10789767-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789767
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789767
    reference: chr 19
allele count: 1
allele frequency: 8.248919391559706e-6
allele num: 121228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.652-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.296-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.652-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.652-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.652-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.652-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.652-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.652-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.652-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*234-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.652-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.107-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.150-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.926-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.361-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*142-6C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.652-6C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13957
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.652-6C>T
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum

19-10789784-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789784
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789784
    reference: chr 19
allele count: 5
allele frequency: 4.123983438082513e-5
allele num: 121242
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.663C>T
  hgvsp: ENST00000420083.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.118C>T
  hgvsp: ENSP00000467372.1:p.Arg40Trp
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.663C>T
  hgvsp: ENST00000250241.8:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.161C>T
  hgvsp: ENSP00000467704.1:p.Thr54Met
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.372C>T
  hgvsp: ENSP00000465831.1:p.Arg125Trp
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.663C>T
  hgvsp: ENST00000592763.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.663C>T
  hgvsp: ENST00000407004.3:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.663C>T
  hgvsp: ENST00000589998.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.663C>T
  hgvsp: ENST00000590261.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.663C>T
  hgvsp: ENST00000588657.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.937C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.307C>T
  hgvsp: ENST00000585835.1:c.307C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.663C>T
  hgvsp: ENST00000318511.3:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*153C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.663C>T
  hgvsp: ENST00000590009.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*245C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.663C>T
  hgvsp: ENST00000449870.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg125Trp
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

19-10789802-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789802
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789802
    reference: chr 19
allele count: 1
allele frequency: 8.249191579225235e-6
allele num: 121224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.390C>T
  hgvsp: ENSP00000465831.1:p.His131Tyr
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.681C>T
  hgvsp: ENST00000318511.3:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.325C>T
  hgvsp: ENST00000585835.1:c.325C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.681C>T
  hgvsp: ENST00000588657.1:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.681C>T
  hgvsp: ENST00000592763.1:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.955C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.136C>T
  hgvsp: ENSP00000467372.1:p.His46Tyr
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*11C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.681C>T
  hgvsp: ENST00000589998.1:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.681C>T
  hgvsp: ENST00000449870.1:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.681C>T
  hgvsp: ENST00000590009.1:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*171C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.681C>T
  hgvsp: ENST00000250241.8:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.681C>T
  hgvsp: ENST00000590261.1:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.681C>T
  hgvsp: ENST00000420083.1:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.681C>T
  hgvsp: ENST00000407004.3:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*263C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27011
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His46Tyr
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-10789811-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789811
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789811
    reference: chr 19
allele count: 1
allele frequency: 8.249599894405122e-6
allele num: 121218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.690C>A
  hgvsp: ENST00000592763.1:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.690C>A
  hgvsp: ENST00000588657.1:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.690C>A
  hgvsp: ENST00000590009.1:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.334C>A
  hgvsp: ENST00000585835.1:c.334C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*272C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*180C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.399C>A
  hgvsp: ENSP00000465831.1:p.Pro134Thr
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.145C>A
  hgvsp: ENSP00000467372.1:p.Pro49Thr
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.690C>A
  hgvsp: ENST00000318511.3:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.690C>A
  hgvsp: ENST00000449870.1:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.690C>A
  hgvsp: ENST00000589998.1:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*20C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.964C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.690C>A
  hgvsp: ENST00000420083.1:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.690C>A
  hgvsp: ENST00000407004.3:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.690C>A
  hgvsp: ENST00000590261.1:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.690C>A
  hgvsp: ENST00000250241.8:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro49Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

19-10789813-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789813
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789813
    reference: chr 19
allele count: 1
allele frequency: 8.250961236984109e-6
allele num: 121198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*182G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.692G>A
  hgvsp: ENSP00000465515.1:p.Arg231Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.692G>A
  hgvsp: ENSP00000468181.1:p.Arg231Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.692G>A
  hgvsp: ENSP00000250241.8:p.Arg231Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.401G>A
  hgvsp: ENST00000589416.1:c.401G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.692G>A
  hgvsp: ENSP00000405436.1:p.Arg231Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.692G>A
  hgvsp: ENSP00000315205.3:p.Arg231Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.692G>A
  hgvsp: ENSP00000404121.1:p.Arg231Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.336G>A
  hgvsp: ENSP00000467950.1:p.Arg113Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.692G>A
  hgvsp: ENSP00000468156.1:p.Arg231Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.147G>A
  hgvsp: ENST00000589485.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*274G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.692G>A
  hgvsp: ENSP00000465654.1:p.Arg231Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.692G>A
  hgvsp: ENSP00000384660.2:p.Arg231Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*22G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.692G>A
  hgvsp: ENSP00000465219.1:p.Arg231Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.966G>A
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg231Gln
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

19-10789826-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789826
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789826
    reference: chr 19
allele count: 3
allele frequency: 2.476269087907552e-5
allele num: 121150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.705C>T
  hgvsp: ENST00000318511.3:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.705C>T
  hgvsp: ENST00000420083.1:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.705C>T
  hgvsp: ENST00000590009.1:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.414C>T
  hgvsp: ENSP00000465831.1:p.Pro139Ser
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*287C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.705C>T
  hgvsp: ENST00000407004.3:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*35C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.705C>T
  hgvsp: ENST00000449870.1:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.705C>T
  hgvsp: ENST00000589998.1:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.705C>T
  hgvsp: ENST00000588657.1:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.705C>T
  hgvsp: ENST00000592763.1:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.160C>T
  hgvsp: ENSP00000467372.1:p.Pro54Ser
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.349C>T
  hgvsp: ENST00000585835.1:c.349C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.705C>T
  hgvsp: ENST00000250241.8:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.705C>T
  hgvsp: ENST00000590261.1:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.979C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*195C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro54Ser
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

19-10789829-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789829
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789829
    reference: chr 19
allele count: 1
allele frequency: 8.256683785524381e-6
allele num: 121114
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*290G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.982G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.708G>A
  hgvsp: ENST00000592763.1:c.708G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.708G>A
  hgvsp: ENST00000590261.1:c.708G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.708G>A
  hgvsp: ENST00000589998.1:c.708G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.708G>A
  hgvsp: ENST00000590009.1:c.708G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.163G>A
  hgvsp: ENSP00000467372.1:p.Val55Met
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.708G>A
  hgvsp: ENST00000588657.1:c.708G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.708G>A
  hgvsp: ENST00000449870.1:c.708G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*198G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.352G>A
  hgvsp: ENST00000585835.1:c.352G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.417G>A
  hgvsp: ENSP00000465831.1:p.Val140Met
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.708G>A
  hgvsp: ENST00000318511.3:c.708G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.708G>A
  hgvsp: ENST00000407004.3:c.708G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.708G>A
  hgvsp: ENST00000420083.1:c.708G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.708G>A
  hgvsp: ENST00000250241.8:c.708G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val55Met
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum

19-10789836-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789836
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789836
    reference: chr 19
allele count: 1
allele frequency: 8.259002312520648e-6
allele num: 121080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.989C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.424C>T
  hgvsp: ENSP00000465831.1:p.Ser142Leu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.715C>T
  hgvsp: ENSP00000468156.1:p.Arg239Cys
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.715C>T
  hgvsp: ENSP00000468181.1:p.Arg239Cys
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.715C>T
  hgvsp: ENSP00000465515.1:p.Arg239Cys
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.715C>T
  hgvsp: ENSP00000405436.1:p.Arg239Cys
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.715C>T
  hgvsp: ENSP00000404121.1:p.Arg239Cys
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.170C>T
  hgvsp: ENSP00000467372.1:p.Ser57Leu
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.715C>T
  hgvsp: ENSP00000384660.2:p.Arg239Cys
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.715C>T
  hgvsp: ENSP00000465219.1:p.Arg239Cys
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*205C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.715C>T
  hgvsp: ENSP00000315205.3:p.Arg239Cys
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.715C>T
  hgvsp: ENSP00000250241.8:p.Arg239Cys
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*45C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.715C>T
  hgvsp: ENSP00000465654.1:p.Arg239Cys
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.359C>T
  hgvsp: ENSP00000467950.1:p.Arg121Cys
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*297C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg239Cys
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

19-10789838-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789838
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789838
    reference: chr 19
allele count: 14
allele frequency: 1.156374929791522e-4
allele num: 121068
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.717C>T
  hgvsp: ENST00000420083.1:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.361C>T
  hgvsp: ENST00000585835.1:c.361C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*299C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.717C>T
  hgvsp: ENST00000318511.3:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.717C>T
  hgvsp: ENST00000250241.8:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.717C>T
  hgvsp: ENST00000588657.1:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.717C>T
  hgvsp: ENST00000407004.3:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.426C>T
  hgvsp: ENSP00000465831.1:p.Arg143Cys
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.717C>T
  hgvsp: ENST00000590261.1:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.717C>T
  hgvsp: ENST00000590009.1:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.172C>T
  hgvsp: ENSP00000467372.1:p.Arg58Cys
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.717C>T
  hgvsp: ENST00000589998.1:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.717C>T
  hgvsp: ENST00000592763.1:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.717C>T
  hgvsp: ENST00000449870.1:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*207C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*47C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.991C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg58Cys
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-10789844-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789844
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789844
    reference: chr 19
allele count: 1
allele frequency: 8.264189613566494e-6
allele num: 121004
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.178C>A
  hgvsp: ENSP00000467372.1:p.His60Asn
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.723C>A
  hgvsp: ENST00000318511.3:c.723C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.367C>A
  hgvsp: ENST00000585835.1:c.367C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.723C>A
  hgvsp: ENST00000589998.1:c.723C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.432C>A
  hgvsp: ENSP00000465831.1:p.His145Asn
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.723C>A
  hgvsp: ENST00000420083.1:c.723C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.723C>A
  hgvsp: ENST00000588657.1:c.723C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*53C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.723C>A
  hgvsp: ENST00000407004.3:c.723C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.723C>A
  hgvsp: ENST00000592763.1:c.723C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.723C>A
  hgvsp: ENST00000590261.1:c.723C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.723C>A
  hgvsp: ENST00000590009.1:c.723C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.723C>A
  hgvsp: ENST00000250241.8:c.723C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.997C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.723C>A
  hgvsp: ENST00000449870.1:c.723C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*213C>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468092
  ensembl transcript: ENST00000589052
  gene symbol: ILF3
  hgvsc: ENST00000589052.1:c.*305C>A
  variant of: http://identifiers.org/hgnc/6038
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His60Asn
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

19-10789847-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789847
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789847
    reference: chr 19
allele count: 2
allele frequency: 1.653357141676174e-5
allele num: 120966
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.435C>G
  hgvsp: ENSP00000465831.1:p.Leu146Val
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.726C>G
  hgvsp: ENST00000592763.1:c.726C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.726C>G
  hgvsp: ENST00000590261.1:c.726C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.726C>G
  hgvsp: ENST00000449870.1:c.726C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.726C>G
  hgvsp: ENST00000590009.1:c.726C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.726C>G
  hgvsp: ENST00000407004.3:c.726C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.726C>G
  hgvsp: ENST00000250241.8:c.726C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.726C>G
  hgvsp: ENST00000589998.1:c.726C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1000C>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*56C>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*216C>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.181C>G
  hgvsp: ENSP00000467372.1:p.Leu61Val
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.726C>G
  hgvsp: ENST00000588657.1:c.726C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.726C>G
  hgvsp: ENST00000420083.1:c.726C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.370C>G
  hgvsp: ENST00000585835.1:c.370C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.726C>G
  hgvsp: ENST00000318511.3:c.726C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10600
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu61Val
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

19-10789851-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789851
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789851
    reference: chr 19
allele count: 4
allele frequency: 3.308902602451897e-5
allele num: 120886
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.730G>C
  hgvsp: ENSP00000468181.1:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.439G>C
  hgvsp: ENSP00000465831.1:p.Gly147Ala
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.730G>C
  hgvsp: ENSP00000405436.1:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.730G>C
  hgvsp: ENSP00000465219.1:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.730G>C
  hgvsp: ENSP00000404121.1:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.374G>C
  hgvsp: ENSP00000467950.1:p.Gly126Arg
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.730G>C
  hgvsp: ENSP00000465654.1:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.730G>C
  hgvsp: ENSP00000465515.1:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.185G>C
  hgvsp: ENSP00000467372.1:p.Gly62Ala
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1004G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.730G>C
  hgvsp: ENSP00000250241.8:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.730G>C
  hgvsp: ENSP00000384660.2:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.730G>C
  hgvsp: ENSP00000315205.3:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*220G>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.730G>C
  hgvsp: ENSP00000468156.1:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*60G>C
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly244Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

19-10789852-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789852
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789852
    reference: chr 19
allele count: 1
allele frequency: 8.272119647938589e-6
allele num: 120888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.731G>T
  hgvsp: ENSP00000250241.8:p.Gly244Val
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*61G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.186G>T
  hgvsp: ENST00000589485.1:c.186G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.731G>T
  hgvsp: ENSP00000465654.1:p.Gly244Val
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.731G>T
  hgvsp: ENSP00000468181.1:p.Gly244Val
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.440G>T
  hgvsp: ENST00000589416.1:c.440G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.375G>T
  hgvsp: ENSP00000467950.1:p.Gly126Val
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.731G>T
  hgvsp: ENSP00000404121.1:p.Gly244Val
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.731G>T
  hgvsp: ENSP00000315205.3:p.Gly244Val
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.731G>T
  hgvsp: ENSP00000465219.1:p.Gly244Val
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.731G>T
  hgvsp: ENSP00000405436.1:p.Gly244Val
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*221G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.731G>T
  hgvsp: ENSP00000465515.1:p.Gly244Val
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.731G>T
  hgvsp: ENSP00000384660.2:p.Gly244Val
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.731G>T
  hgvsp: ENSP00000468156.1:p.Gly244Val
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1005G>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13879
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly244Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum

19-10789854-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789854
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789854
    reference: chr 19
allele count: 1
allele frequency: 8.274857672448034e-6
allele num: 120848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.733C>T
  hgvsp: ENSP00000468156.1:p.Pro245Ser
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.733C>T
  hgvsp: ENSP00000405436.1:p.Pro245Ser
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.733C>T
  hgvsp: ENSP00000465219.1:p.Pro245Ser
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.733C>T
  hgvsp: ENSP00000250241.8:p.Pro245Ser
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.733C>T
  hgvsp: ENSP00000468181.1:p.Pro245Ser
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.188C>T
  hgvsp: ENSP00000467372.1:p.Ser63Phe
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.733C>T
  hgvsp: ENSP00000315205.3:p.Pro245Ser
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.733C>T
  hgvsp: ENSP00000404121.1:p.Pro245Ser
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.733C>T
  hgvsp: ENSP00000384660.2:p.Pro245Ser
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.733C>T
  hgvsp: ENSP00000465515.1:p.Pro245Ser
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.377C>T
  hgvsp: ENSP00000467950.1:p.Pro127Ser
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1007C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*63C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.442C>T
  hgvsp: ENSP00000465831.1:p.Ser148Phe
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*223C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.733C>T
  hgvsp: ENSP00000465654.1:p.Pro245Ser
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro245Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

19-10789861-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789861
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789861
    reference: chr 19
allele count: 1
allele frequency: 8.284866862189524e-6
allele num: 120702
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.740G>A
  hgvsp: ENSP00000315205.3:p.Arg247Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*230G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.740G>A
  hgvsp: ENSP00000465219.1:p.Arg247Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.740G>A
  hgvsp: ENSP00000465515.1:p.Arg247Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.384G>A
  hgvsp: ENSP00000467950.1:p.Arg129Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.740G>A
  hgvsp: ENSP00000404121.1:p.Arg247Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.449G>A
  hgvsp: ENST00000589416.1:c.449G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.195G>A
  hgvsp: ENST00000589485.1:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.740G>A
  hgvsp: ENSP00000468156.1:p.Arg247Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.740G>A
  hgvsp: ENSP00000405436.1:p.Arg247Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.740G>A
  hgvsp: ENSP00000384660.2:p.Arg247Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.740G>A
  hgvsp: ENSP00000250241.8:p.Arg247Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1014G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*70G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.740G>A
  hgvsp: ENSP00000465654.1:p.Arg247Gln
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000589173
  gene symbol: ILF3
  hgvsc: ENST00000589173.1:n.1G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.740G>A
  hgvsp: ENSP00000468181.1:p.Arg247Gln
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg247Gln
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-10789877-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789877
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789877
    reference: chr 19
allele count: 1
allele frequency: 8.320159747067144e-6
allele num: 120190
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*77+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000589173
  gene symbol: ILF3
  hgvsc: ENST00000589173.1:n.8+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.747+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1021+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*237+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.747+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.747+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.456+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.747+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.747+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.202+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.391+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.747+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.747+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.747+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.747+9T>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.747+9T>C
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

19-10789881-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789881
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789881
    reference: chr 19
allele count: 3
allele frequency: 2.501208917643528e-5
allele num: 119942
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*77+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.747+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.747+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.747+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1021+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.747+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.202+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.391+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.747+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000589173
  gene symbol: ILF3
  hgvsc: ENST00000589173.1:n.8+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.747+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.747+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.747+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*237+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.456+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.747+13G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.747+13G>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum

19-10789884-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789884
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789884
    reference: chr 19
allele count: 1
allele frequency: 8.351428094204109e-6
allele num: 119740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.391+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.747+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.747+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.747+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.747+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*237+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.747+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1021+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.747+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.747+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*77+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000589173
  gene symbol: ILF3
  hgvsc: ENST00000589173.1:n.8+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.747+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.456+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.747+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.202+16G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.747+16G>A
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-10789887-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789887
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789886
    reference: chr 19
allele count: 2
allele frequency: 1.673304106288277e-5
allele num: 119524
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*77+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.747+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.747+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.202+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.747+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.747+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.747+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.747+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*237+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.747+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.747+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.747+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.456+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1021+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.391+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.747+20delC
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000589173
  gene symbol: ILF3
  hgvsc: ENST00000589173.1:n.8+20delC
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12717
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24467
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: GC
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/19-10789890-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789890
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789890
    reference: chr 19
allele count: 3
allele frequency: 2.513278488011661e-5
allele num: 119366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.747+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.747+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.747+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.747+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1021+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.747+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.747+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.747+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*77+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.202+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000589173
  gene symbol: ILF3
  hgvsc: ENST00000589173.1:n.8+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.747+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.747+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.747+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.391+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.456+22A>C
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*237+22A>C
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12404
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

19-10789890-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789890
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789890
    reference: chr 19
allele count: 1
allele frequency: 8.377594960038872e-6
allele num: 119366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.202+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000589173
  gene symbol: ILF3
  hgvsc: ENST00000589173.1:n.8+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.747+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.747+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.747+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*77+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*237+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.747+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.747+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.391+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1021+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.456+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.747+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.747+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.747+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.747+22A>G
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.747+22A>G
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

19-10789891-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789891
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789891
    reference: chr 19
allele count: 162
allele frequency: 1.359288471220003e-3
allele num: 119180
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.391+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.747+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.747+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.747+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.747+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.747+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.747+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000589173
  gene symbol: ILF3
  hgvsc: ENST00000589173.1:n.8+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.747+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*77+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1021+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.747+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.456+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*237+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.747+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.202+23C>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.747+23C>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12316
  bin: 3.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 4.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

19-10789894-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789894
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789894
    reference: chr 19
allele count: 2
allele frequency: 1.679261125104954e-5
allele num: 119100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1021+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.391+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.747+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.747+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.747+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.202+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.747+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.747+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.747+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000589173
  gene symbol: ILF3
  hgvsc: ENST00000589173.1:n.8+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.747+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.747+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*77+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.747+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.747+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*237+26G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.456+26G>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8779
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD

19-10789902-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789902
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789902
    reference: chr 19
allele count: 1044
allele frequency: 8.807599507314356e-3
allele num: 118534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.747+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.747+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.747+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*237+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.202+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.747+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.747+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.747+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.456+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.747+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*77+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.747+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.391+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1021+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000589173
  gene symbol: ILF3
  hgvsc: ENST00000589173.1:n.8+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.747+34G>T
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.747+34G>T
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 19215
  bin: 2.75e1
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 6743
  bin: 1.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 68
genotype quality: GenotypeQuality
num of homozygotes: 50
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum

19-10789906-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789906
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789906
    reference: chr 19
allele count: 1
allele frequency: 8.472996559963397e-6
allele num: 118022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.391+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1021+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*237+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.747+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.747+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.747+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.747+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.747+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000589173
  gene symbol: ILF3
  hgvsc: ENST00000589173.1:n.8+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.456+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.747+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.747+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.747+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.747+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*77+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.747+38G>A
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.202+38G>A
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7630
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP

19-10789907-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10789907
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10789905
    reference: chr 19
allele count: 2
allele frequency: 1.698686915014694e-5
allele num: 117738
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000315205
  ensembl transcript: ENST00000318511
  gene symbol: ILF3
  hgvsc: ENST00000318511.3:c.747+42_747+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000405436
  ensembl transcript: ENST00000420083
  gene symbol: ILF3
  hgvsc: ENST00000420083.1:c.747+42_747+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000466991
  ensembl transcript: ENST00000587505
  gene symbol: ILF3
  hgvsc: ENST00000587505.1:c.*237+42_*237+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000587928
  gene symbol: ILF3
  hgvsc: ENST00000587928.1:n.1021+42_1021+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465515
  ensembl transcript: ENST00000592763
  gene symbol: ILF3
  hgvsc: ENST00000592763.1:c.747+42_747+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000384660
  ensembl transcript: ENST00000407004
  gene symbol: ILF3
  hgvsc: ENST00000407004.3:c.747+42_747+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468156
  ensembl transcript: ENST00000590261
  gene symbol: ILF3
  hgvsc: ENST00000590261.1:c.747+42_747+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000404121
  ensembl transcript: ENST00000449870
  gene symbol: ILF3
  hgvsc: ENST00000449870.1:c.747+42_747+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465219
  ensembl transcript: ENST00000589998
  gene symbol: ILF3
  hgvsc: ENST00000589998.1:c.747+42_747+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467950
  ensembl transcript: ENST00000585835
  gene symbol: ILF3
  hgvsc: ENST00000585835.1:c.391+42_391+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465831
  ensembl transcript: ENST00000589416
  gene symbol: ILF3
  hgvsc: ENST00000589416.1:c.456+42_456+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl transcript: ENST00000589173
  gene symbol: ILF3
  hgvsc: ENST00000589173.1:n.8+42_8+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000465654
  ensembl transcript: ENST00000590009
  gene symbol: ILF3
  hgvsc: ENST00000590009.1:c.747+42_747+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467704
  ensembl transcript: ENST00000587840
  gene symbol: ILF3
  hgvsc: ENST00000587840.1:c.*77+42_*77+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000468181
  ensembl transcript: ENST00000588657
  gene symbol: ILF3
  hgvsc: ENST00000588657.1:c.747+42_747+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000467372
  ensembl transcript: ENST00000589485
  gene symbol: ILF3
  hgvsc: ENST00000589485.1:c.202+42_202+43delAG
  variant of: http://identifiers.org/hgnc/6038
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000129351
  ensembl protein: ENSP00000250241
  ensembl transcript: ENST00000250241
  gene symbol: ILF3
  hgvsc: ENST00000250241.8:c.747+42_747+43delAG
  variant of: http://identifiers.org/hgnc/6038
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10992
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9246
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
reference allele: CAG

GenotypeDepth
all individuals: 4088
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9355
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4081
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 686
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 977
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 275
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 903
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 361
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1420
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6081
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 460
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8515
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4237
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4884
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1537
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22076
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4368
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11601
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2564
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4619
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2480
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.301991429291656e-5
allele num: 15868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66298
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.35363e6

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 2.521e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.334e0

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

QD
type: SiteQuality
SIO_000300: 1.321e1

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 3.25e1
variant carriers: 0

African
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allele count: 6
allele frequency: 5.81170089112747e-4
allele num: 10324
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66264
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.264222503160556e-4
allele num: 15820
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.458e0

QD
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SIO_000300: 7.92e0

ClippingRankSum
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SIO_000300: -3.28e-1

VQSLOD
type: SiteQuality
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MQRankSum
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SIO_000300: -4.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.92e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.349572e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22067
bin: 9.75e1
variant carriers: 6

European (Non-Finnish)
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allele count: 4
allele frequency: 6.035913686434284e-5
allele num: 66270
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.331518298087882e-5
allele num: 15794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.03e-1

DP
type: SiteQuality
SIO_000300: 2.346844e6

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-1

QD
type: SiteQuality
SIO_000300: 1.057e1

FS
type: SiteQuality
SIO_000300: 3.071e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

GenotypeDepth
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509980974239725e-5
allele num: 66226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.1e-1

ClippingRankSum
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SIO_000300: -3.8e-1

MQ
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SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.037e1

MQRankSum
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SIO_000300: 1.08e0

InbreedingCoeff
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SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.338524e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.514004542013626e-5
allele num: 66050
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15400
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.379e0

InbreedingCoeff
type: SiteQuality
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MQRankSum
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VQSLOD
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DP
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FS
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QD
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MQ
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ReadPosRankSum
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162520344106022e-4
allele num: 8602
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

InbreedingCoeff
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SIO_000300: 3.5e-3

VQSLOD
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BaseQRankSum
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SIO_000300: -9.429999999999999e-1

FS
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SIO_000300: 1.7861e1

ClippingRankSum
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SIO_000300: -1.98e-1

MQ
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DP
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QD
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 3.475842891901286e-4
allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65884
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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QD
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MQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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SIO_000300: 3.5e-3

DP
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SIO_000300: 2.296236e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

Latino
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allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.64982045484772e-5
allele num: 15038
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQ
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SIO_000300: 6.0e1

ReadPosRankSum
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MQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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QD
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DP
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.5092439500977e-5
allele num: 66530
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 29
allele frequency: 1.766354001705445e-3
allele num: 16418
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-1

DP
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SIO_000300: 1.836851e6

FS
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SIO_000300: 0.0e0

MQRankSum
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ClippingRankSum
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QD
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VQSLOD
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InbreedingCoeff
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SIO_000300: 4.15e-2

MQ
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SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -3.926e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
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allele num: 66642
num of homozygotes: 0

South Asian
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East Asian
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Latino
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Other
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DP
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MQ
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ClippingRankSum
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MQRankSum
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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Other
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East Asian
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South Asian
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Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.998410842253606e-5
allele num: 66702
num of homozygotes: 0

MQ
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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FS
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QD
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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QD
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DP
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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VQSLOD
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DP
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FS
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MQRankSum
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QD
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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South Asian
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VQSLOD
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FS
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QD
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MQ
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MQRankSum
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BaseQRankSum
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DP
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African
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Latino
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South Asian
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European (Non-Finnish)
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MQ
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BaseQRankSum
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DP
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African
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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African
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East Asian
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Latino
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European (Non-Finnish)
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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FS
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MQRankSum
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ClippingRankSum
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QD
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DP
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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East Asian
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African
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South Asian
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Latino
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InbreedingCoeff
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FS
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DP
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ReadPosRankSum
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MQ
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VQSLOD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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Other
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African
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South Asian
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European (Non-Finnish)
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DP
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ClippingRankSum
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VQSLOD
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QD
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MQRankSum
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ReadPosRankSum
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MQ
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FS
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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South Asian
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InbreedingCoeff
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MQRankSum
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FS
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QD
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MQ
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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African
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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DP
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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QD
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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South Asian
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Other
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European (Non-Finnish)
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num of homozygotes: 0

East Asian
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African
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allele frequency: 9.801999607920016e-5
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VQSLOD
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ClippingRankSum
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FS
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DP
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MQ
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QD
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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SIO_000300: -4.1e-2

ReadPosRankSum
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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African
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InbreedingCoeff
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QD
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DP
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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FS
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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East Asian
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Other
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQ
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SIO_000300: 5.961e1

BaseQRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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ClippingRankSum
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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East Asian
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Latino
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Other
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European (Non-Finnish)
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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DP
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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allele frequency: 3.464403256539061e-4
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European (Finnish)
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South Asian
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Other
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European (Non-Finnish)
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MQRankSum
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FS
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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DP
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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South Asian
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African
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Latino
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European (Finnish)
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Other
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QD
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ReadPosRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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MQ
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DP
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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European (Finnish)
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African
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MQ
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FS
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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QD
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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African
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Other
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East Asian
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ClippingRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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FS
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QD
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MQ
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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African
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South Asian
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Latino
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Other
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InbreedingCoeff
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MQRankSum
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MQ
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BaseQRankSum
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VQSLOD
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FS
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DP
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Non-Finnish)
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South Asian
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African
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European (Finnish)
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Other
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FS
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ReadPosRankSum
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QD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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DP
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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African
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Other
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European (Finnish)
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East Asian
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European (Non-Finnish)
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BaseQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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DP
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ClippingRankSum
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VQSLOD
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FS
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QD
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MQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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DP
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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QD
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South Asian
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European (Non-Finnish)
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MQ
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VQSLOD
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DP
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GenotypeQuality
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African
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Latino
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South Asian
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European (Non-Finnish)
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East Asian
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VQSLOD
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BaseQRankSum
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FS
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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QD
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DP
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African
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East Asian
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European (Finnish)
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Other
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DP
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VQSLOD
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African
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South Asian
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VQSLOD
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African
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GenotypeQuality
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European (Non-Finnish)
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African
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DP
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VQSLOD
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MQ
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QD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Finnish)
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FS
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InbreedingCoeff
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QD
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MQ
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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East Asian
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FS
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VQSLOD
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InbreedingCoeff
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MQ
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DP
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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VQSLOD
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FS
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DP
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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VQSLOD
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DP
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FS
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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VQSLOD
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QD
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MQ
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BaseQRankSum
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ReadPosRankSum
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FS
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ClippingRankSum
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DP
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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QD
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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MQ
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DP
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FS
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Latino
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Other
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European (Non-Finnish)
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European (Finnish)
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African
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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FS
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VQSLOD
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MQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Non-Finnish)
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East Asian
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European (Finnish)
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African
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South Asian
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MQ
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MQRankSum
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FS
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DP
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QD
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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South Asian
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Other
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European (Finnish)
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African
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European (Non-Finnish)
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ClippingRankSum
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QD
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MQ
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FS
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQRankSum
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DP
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Latino
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African
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South Asian
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East Asian
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MQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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QD
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MQ
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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African
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Latino
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East Asian
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ReadPosRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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BaseQRankSum
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FS
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MQRankSum
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DP
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QD
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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South Asian
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Other
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African
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FS
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MQRankSum
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MQ
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DP
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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South Asian
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Other
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European (Finnish)
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European (Non-Finnish)
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QD
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BaseQRankSum
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MQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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DP
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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East Asian
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MQRankSum
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ReadPosRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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FS
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QD
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DP
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Latino
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South Asian
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European (Finnish)
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East Asian
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DP
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MQ
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MQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.518602885345482e-5
allele num: 65850
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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South Asian
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InbreedingCoeff
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FS
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QD
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MQRankSum
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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DP
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BaseQRankSum
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MQ
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SIO_000300: 6.032e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 886
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.04062271953296e-5
allele num: 65776
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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InbreedingCoeff
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BaseQRankSum
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DP
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ReadPosRankSum
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VQSLOD
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FS
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ClippingRankSum
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SIO_000300: -2.67e-1

MQRankSum
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MQ
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SIO_000300: 6.0e1

QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65776
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.252344629235963e-5
allele num: 15994
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.993e0

VQSLOD
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ClippingRankSum
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SIO_000300: -2.67e-1

InbreedingCoeff
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SIO_000300: 7.0e-4

DP
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SIO_000300: 1.717239e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

BaseQRankSum
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SIO_000300: 2.27e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.09e-1

QD
type: SiteQuality
SIO_000300: 1.254e1

GenotypeDepth
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variant carriers: 16

GenotypeDepth
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variant carriers: 12

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 2
allele frequency: 3.116235587410408e-4
allele num: 6418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 145
allele frequency: 2.207606345726378e-3
allele num: 65682
num of homozygotes: 0

Latino
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allele count: 5
allele frequency: 4.373687893631911e-4
allele num: 11432
num of homozygotes: 0

African
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allele count: 9
allele frequency: 8.820070560564484e-4
allele num: 10204
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.133786848072562e-3
allele num: 882
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South Asian
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: 1.26e-1

MQ
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QD
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DP
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FS
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.165772907437631e-4
allele num: 8578
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15952
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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African
type: Population
allele count: 1
allele frequency: 9.782821365681862e-5
allele num: 10222
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65620
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11414
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BaseQRankSum
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SIO_000300: -2.832e0

MQ
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 3
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allele num: 874
num of homozygotes: 0

East Asian
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African
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allele count: 869
allele frequency: 8.54978354978355e-2
allele num: 10164
num of homozygotes: 48

Latino
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allele count: 55
allele frequency: 4.844961240310077e-3
allele num: 11352
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 52
allele frequency: 3.286563013525471e-3
allele num: 15822
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European (Non-Finnish)
type: Population
allele count: 65
allele frequency: 9.937926184142127e-4
allele num: 65406
num of homozygotes: 1

ClippingRankSum
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SIO_000300: -6.7e-2

MQRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.78e0

DP
type: SiteQuality
SIO_000300: 1.603262e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.84e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.53e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.902e0

GenotypeDepth
all individuals: 1227
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 278
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 142
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10096
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17584
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 470
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 217
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1550
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4054
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4339
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2713
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2614
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1695
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21155
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2234
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4778
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3704
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1639
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6444
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535626535626536e-5
allele num: 65120
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10140
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.360000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.121e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.813e0

FS
type: SiteQuality
SIO_000300: 3.093e0

MQRankSum
type: SiteQuality
SIO_000300: 6.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.561061e6

GenotypeDepth
all individuals: 7692
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 278
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16927
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 147
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 147
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 471
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7050
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1540
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 747
bin: 5.25e1
variant carriers: 0