17-80678227-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678227
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678227
    reference: chr 17
allele count: 1
allele frequency: 8.32209850035785e-6
allele num: 120162
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.373G>A
  hgvsp: ENSP00000269373.6:p.Ala125Thr
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*83G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.373G>A
  hgvsp: ENSP00000458550.1:p.Ala125Thr
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2453G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.223G>A
  hgvsp: ENSP00000459653.1:p.Ala75Thr
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.223G>A
  hgvsp: ENSP00000444994.1:p.Ala75Thr
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.121G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*330G>A
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45992
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala125Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

17-80678228-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678228
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678228
    reference: chr 17
allele count: 2
allele frequency: 1.6655008160954e-5
allele num: 120084
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.374C>T
  hgvsp: ENSP00000269373.6:p.Ala125Val
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2452C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*331C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.374C>T
  hgvsp: ENSP00000458550.1:p.Ala125Val
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.224C>T
  hgvsp: ENSP00000459653.1:p.Ala75Val
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.122C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*84C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.224C>T
  hgvsp: ENSP00000444994.1:p.Ala75Val
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45786
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala125Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

17-80678229-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678229
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678229
    reference: chr 17
allele count: 5
allele frequency: 4.166736112268538e-5
allele num: 119998
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.375G>A
  hgvsp: ENST00000574356.1:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*85G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.225G>A
  hgvsp: ENST00000577128.1:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.225G>A
  hgvsp: ENST00000535965.1:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*332G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.375G>A
  hgvsp: ENST00000269373.6:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2451G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.123G>A
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18348
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1680
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1153
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala125Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

17-80678229-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678229
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678229
    reference: chr 17
allele count: 1
allele frequency: 8.333472224537076e-6
allele num: 119998
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.225G>T
  hgvsp: ENST00000577128.1:c.225G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.225G>T
  hgvsp: ENST00000535965.1:c.225G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.375G>T
  hgvsp: ENST00000574356.1:c.375G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.123G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.375G>T
  hgvsp: ENST00000269373.6:c.375G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*85G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2451G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*332G>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala125Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

17-80678235-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678235
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678235
    reference: chr 17
allele count: 1
allele frequency: 8.348081610845828e-6
allele num: 119788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*338A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.381A>G
  hgvsp: ENST00000574356.1:c.381A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.231A>G
  hgvsp: ENST00000535965.1:c.231A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.231A>G
  hgvsp: ENST00000577128.1:c.231A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.129A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2445A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.381A>G
  hgvsp: ENST00000269373.6:c.381A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*91A>G
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr127Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

17-80678236-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678236
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678236
    reference: chr 17
allele count: 1
allele frequency: 8.353660574063554e-6
allele num: 119708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*339G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.382G>T
  hgvsp: ENSP00000458550.1:p.Val128Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.232G>T
  hgvsp: ENSP00000459653.1:p.Val78Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.232G>T
  hgvsp: ENSP00000444994.1:p.Val78Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.382G>T
  hgvsp: ENSP00000269373.6:p.Val128Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2444G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*92G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.130G>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32073
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1648
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6559
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val128Leu
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

17-80678243-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678243
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678243
    reference: chr 17
allele count: 1
allele frequency: 8.416658250008417e-6
allele num: 118812
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2437T>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+4T>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+4T>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+4T>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+4T>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+4T>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+4T>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+4T>A
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5094
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6303
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1645
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42588
  bin: 6.25e1
  variant carriers: 0
hgvs: c.385+4T>A
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

17-80678251-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678251
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678251
    reference: chr 17
allele count: 1
allele frequency: 8.515276405872134e-6
allele num: 117436
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+12C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+12C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+12C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+12C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2429C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+12C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+12C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+12C>G
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1549
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2257
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36035
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

17-80678252-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678252
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678252
    reference: chr 17
allele count: 5
allele frequency: 4.259596871752058e-5
allele num: 117382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2428G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+13G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+13G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+13G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+13G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+13G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+13G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+13G>A
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16159
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4813
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1146
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4931
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum

17-80678253-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678253
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678253
    reference: chr 17
allele count: 14
allele frequency: 1.195130696078264e-4
allele num: 117142
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+14C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+14C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2427C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+14C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+14C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+14C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+14C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+14C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4881
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25399
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16192
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5010
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1915
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

17-80678254-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678254
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678254
    reference: chr 17
allele count: 1
allele frequency: 8.529075618784437e-6
allele num: 117246
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+15G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+15G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+15G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+15G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+15G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+15G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+15G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2426G>A
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6516
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2440
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

17-80678255-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678255
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678255
    reference: chr 17
allele count: 6
allele frequency: 5.123825789923142e-5
allele num: 117100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+16G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2425G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+16G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+16G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+16G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+16G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+16G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+16G>A
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15678
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1146
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 5372
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1539
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2824
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

17-80678260-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678260
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678260
    reference: chr 17
allele count: 69
allele frequency: 5.937220348316927e-4
allele num: 116216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+21C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+21C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+21C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+21C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+21C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+21C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+21C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2420C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14802
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9218
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4539
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 21729
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5710
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6358
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1842
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28190
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

17-80678261-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678261
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678261
    reference: chr 17
allele count: 130
allele frequency: 1.117971827109957e-3
allele num: 116282
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+22G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+22G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2419G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+22G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+22G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+22G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+22G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+22G>A
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 14845
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 21899
  bin: 2.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9260
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 3.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5653
  bin: 1.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2716
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4580
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3861
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ

17-80678266-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678266
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678266
    reference: chr 17
allele count: 1
allele frequency: 8.635578583765113e-6
allele num: 115800
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+27C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+27C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2414C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+27C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+27C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+27C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+27C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+27C>G
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10595
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7027
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1354
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

17-80678268-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678268
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678268
    reference: chr 17
allele count: 1
allele frequency: 8.654262224145391e-6
allele num: 115550
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+29C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+29C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2412C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+29C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+29C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+29C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+29C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+29C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19579
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10927
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7918
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4259
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5011
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

17-80678269-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678269
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678269
    reference: chr 17
allele count: 4
allele frequency: 3.465243606625546e-5
allele num: 115432
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2411C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+30C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+30C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+30C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+30C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+30C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+30C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+30C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8297
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13351
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3825
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3882
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1408
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7247
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

17-80678270-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678270
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678270
    reference: chr 17
allele count: 2
allele frequency: 1.73550850399167e-5
allele num: 115240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2410C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+31C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+31C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+31C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+31C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+31C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+31C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+31C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8764
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11278
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5287
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4082
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum

17-80678271-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678271
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678271
    reference: chr 17
allele count: 1
allele frequency: 8.69943453675511e-6
allele num: 114950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+32G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+32G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+32G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+32G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2409G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+32G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+32G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+32G>A
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11557
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5583
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

17-80678278-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678278
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678278
    reference: chr 17
allele count: 1
allele frequency: 8.739272542953525e-6
allele num: 114426
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+39G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+39G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+39G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+39G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+39G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2402G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+39G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+39G>A
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11879
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2735
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2443
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3822
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

17-80678279-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678279
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678279
    reference: chr 17
allele count: 2
allele frequency: 1.750271292050268e-5
allele num: 114268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+40G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2401G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+40G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+40G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+40G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+40G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+40G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+40G>A
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11826
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3162
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15307
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3787
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2576
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

17-80678279-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678279
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678279
    reference: chr 17
allele count: 2
allele frequency: 1.750271292050268e-5
allele num: 114268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+40G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2401G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+40G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+40G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+40G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+40G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+40G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+40G>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11826
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15307
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6625
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2576
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2952
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19265
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum

17-80678283-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678283
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678283
    reference: chr 17
allele count: 1
allele frequency: 8.818964300832511e-6
allele num: 113392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+44A>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+44A>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+44A>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+44A>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2397A>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+44A>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+44A>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+44A>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11666
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15933
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14372
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3964
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3292
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

17-80678284-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678284
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678284
    reference: chr 17
allele count: 2
allele frequency: 1.77355278093076e-5
allele num: 112768
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+45C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+45C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+45C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2396C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+45C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+45C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+45C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+45C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15930
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11578
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5150
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6914
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum

17-80678287-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678287
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678286
    reference: chr 17
allele count: 139
allele frequency: 1.236324824335142e-3
allele num: 112430
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+49delC
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+49delC
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+49delC
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+49delC
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2392delC
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+49delC
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+49delC
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+49delC
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3573
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11532
  bin: 1.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7641
  bin: 2.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 16991
  bin: 2.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15792
  bin: 1.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 3327
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10780
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3985
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7016
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: TC
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

17-80678288-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678288
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678288
    reference: chr 17
allele count: 1
allele frequency: 8.93000660820489e-6
allele num: 111982
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+49C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+49C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.133+49C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+49C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2392C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+49C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+49C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.385+49C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16889
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15729
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3309
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6988
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3831
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6514
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum

17-80678628-C-CCTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678628
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678631
    reference: chr 17
allele count: 15
allele frequency: 5.0e-1
allele num: 30
alternate allele: CCTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+390_235+392dupCTT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.134-8_134-6dupCTT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+390_*95+392dupCTT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2051_-143-2049dupCTT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.386-8_386-6dupCTT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+390_235+392dupCTT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+390_*342+392dupCTT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+390_385+392dupCTT
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 140
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 2.5e0
  variant carriers: 199
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.25e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 2
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

17-80678671-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678671
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678671
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 8
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+432C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.420C>T
  hgvsp: ENST00000574356.1:c.420C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+432C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+432C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.168C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-2009C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+432C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+432C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2289
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser140Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

17-80678715-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80678715
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80678715
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 8
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*26A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*342+476A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.385+476A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.235+476A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*95+476A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-1965A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.212A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.235+476A>G
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
hgvs: n.212A>G
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

17-80680629-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680629
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680629
    reference: chr 17
allele count: 1
allele frequency: 8.337363058811759e-6
allele num: 119942
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-51G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-51G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-51G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-51G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-51G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-51G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.145G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-51G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-51G>T
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2378
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5652
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5034
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

17-80680630-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680630
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680630
    reference: chr 17
allele count: 5
allele frequency: 4.175853544464488e-5
allele num: 119736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-50C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-50C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-50C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-50C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-50C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-50C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.146C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-50C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-50C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10588
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8003
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3152
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

17-80680632-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680632
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680632
    reference: chr 17
allele count: 1
allele frequency: 8.333611120370679e-6
allele num: 119996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-48C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-48C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.148C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-48C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-48C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-48C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-48C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-48C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-48C>G
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8472
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10952
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4645
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

17-80680632-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680632
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680632
    reference: chr 17
allele count: 4
allele frequency: 3.333444448148272e-5
allele num: 119996
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-48C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-48C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-48C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.148C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-48C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-48C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-48C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-48C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-48C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10815
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10952
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8038
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

17-80680639-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680639
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680639
    reference: chr 17
allele count: 1
allele frequency: 8.325978718798394e-6
allele num: 120106
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-41C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.155C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-41C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-41C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-41C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-41C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-41C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-41C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-41C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8116
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6156
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

17-80680644-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680644
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680644
    reference: chr 17
allele count: 2
allele frequency: 1.66281447978849e-5
allele num: 120278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-36G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-36G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-36G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-36G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-36G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-36G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-36G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-36G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.160G>A
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6248
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-80680645-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680645
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680645
    reference: chr 17
allele count: 31
allele frequency: 2.576419939828128e-4
allele num: 120322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-35G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.161G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-35G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-35G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-35G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-35G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-35G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-35G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-35G>A
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5251
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8158
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11321
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11758
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5095
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6277
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-80680649-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680649
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680649
    reference: chr 17
allele count: 1
allele frequency: 8.299443937256203e-6
allele num: 120490
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-31T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.165T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-31T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-31T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-31T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-31T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-31T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-31T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-31T>G
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8168
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11410
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6356
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18668
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3325
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

17-80680660-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680660
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680660
    reference: chr 17
allele count: 1
allele frequency: 8.278968109414843e-6
allele num: 120788
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-20C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-20C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-20C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-20C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-20C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-20C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.176C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-20C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-20C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11476
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18666
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6402
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5116
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

17-80680663-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680663
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680663
    reference: chr 17
allele count: 1
allele frequency: 8.272530236098013e-6
allele num: 120882
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-17T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-17T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-17T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.179T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-17T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-17T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-17T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-17T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-17T>C
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5261
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3356
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4780
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-80680665-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680665
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680665
    reference: chr 17
allele count: 1
allele frequency: 8.270751315049459e-6
allele num: 120908
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-15A>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-15A>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-15A>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-15A>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-15A>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.181A>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-15A>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-15A>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-15A>C
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5113
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

17-80680665-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680665
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680665
    reference: chr 17
allele count: 1
allele frequency: 8.270751315049459e-6
allele num: 120908
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.181A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-15A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-15A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-15A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-15A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-15A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-15A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-15A>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-15A>G
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11495
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6424
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2434
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

17-80680666-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680666
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680665
    reference: chr 17
allele count: 1
allele frequency: 8.268836409340477e-6
allele num: 120936
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-10delT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-10delT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-10delT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-10delT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-10delT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.186delT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-10delT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-10delT
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-10delT
  variant of: http://identifiers.org/hgnc/25700
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12253
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
reference allele: CT
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-80680672-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680672
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680672
    reference: chr 17
allele count: 13
allele frequency: 1.073865419881379e-4
allele num: 121058
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-8C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-8C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-8C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-8C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.188C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-8C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-8C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-8C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-8C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11507
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
hgvs: c.386-8C>T
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

17-80680676-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680676
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680676
    reference: chr 17
allele count: 1
allele frequency: 8.257638315441784e-6
allele num: 121100
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.386-4C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*343-4C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.236-4C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*153-4C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.236-4C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*96-4C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.215-4C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.192C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-143-4C>G
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
hgvs: c.386-4C>G
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

17-80680682-AGAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680682
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680679
    reference: chr 17
allele count: 1
allele frequency: 8.252595441266279e-6
allele num: 121174
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*103_*105delAGG
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-136_-134delAGG
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*350_*352delAGG
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.222_224delAGG
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.203_205delAGG
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.243_245delAGG
  hgvsp: ENSP00000459653.1:p.Gly83del
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.393_395delAGG
  hgvsp: ENSP00000269373.6:p.Gly133del
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*160_*162delAGG
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.243_245delAGG
  hgvsp: ENSP00000444994.1:p.Gly83del
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12004
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3373
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly133del
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: AGAG
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

17-80680683-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680683
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680683
    reference: chr 17
allele count: 6
allele frequency: 4.951312097705892e-5
allele num: 121180
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-140G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.239G>C
  hgvsp: ENSP00000459653.1:p.Arg80Thr
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*346G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.389G>C
  hgvsp: ENSP00000269373.6:p.Arg130Thr
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.199G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.239G>C
  hgvsp: ENSP00000444994.1:p.Arg80Thr
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*99G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.218G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*156G>C
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg130Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

17-80680696-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680696
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680696
    reference: chr 17
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-127G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*169G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.252G>A
  hgvsp: ENST00000577128.1:c.252G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*359G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.402G>A
  hgvsp: ENST00000269373.6:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.231G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.252G>A
  hgvsp: ENST00000535965.1:c.252G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*112G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.212G>A
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4770
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18667
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln134Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum

17-80680703-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680703
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680703
    reference: chr 17
allele count: 5
allele frequency: 4.123099251245176e-5
allele num: 121268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.259C>T
  hgvsp: ENSP00000459653.1:p.Arg87Trp
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.259C>T
  hgvsp: ENSP00000444994.1:p.Arg87Trp
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*366C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.409C>T
  hgvsp: ENSP00000269373.6:p.Arg137Trp
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.238C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.219C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*176C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*119C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-120C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15957
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg137Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP

17-80680704-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680704
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680704
    reference: chr 17
allele count: 2
allele frequency: 1.64923970049807e-5
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*367G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.410G>A
  hgvsp: ENSP00000269373.6:p.Arg137Gln
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*120G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.220G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-119G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.260G>A
  hgvsp: ENSP00000459653.1:p.Arg87Gln
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.260G>A
  hgvsp: ENSP00000444994.1:p.Arg87Gln
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.239G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*177G>A
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8181
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3734
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18669
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg137Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

17-80680704-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680704
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680704
    reference: chr 17
allele count: 3
allele frequency: 2.473859550747106e-5
allele num: 121268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.260G>T
  hgvsp: ENSP00000444994.1:p.Arg87Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-119G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.260G>T
  hgvsp: ENSP00000459653.1:p.Arg87Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.239G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.410G>T
  hgvsp: ENSP00000269373.6:p.Arg137Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*367G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*120G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.220G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*177G>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8181
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11988
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg137Leu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum

17-80680709-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680709
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680709
    reference: chr 17
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.244T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.415T>C
  hgvsp: ENSP00000269373.6:p.Phe139Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*182T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.265T>C
  hgvsp: ENSP00000459653.1:p.Phe89Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.225T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.265T>C
  hgvsp: ENSP00000444994.1:p.Phe89Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*372T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*125T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-114T>C
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe139Leu
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

17-80680710-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680710
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680710
    reference: chr 17
allele count: 2
allele frequency: 1.649185302460584e-5
allele num: 121272
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.245T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*126T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*183T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.266T>G
  hgvsp: ENSP00000444994.1:p.Phe89Cys
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.266T>G
  hgvsp: ENSP00000459653.1:p.Phe89Cys
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*373T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.226T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.416T>G
  hgvsp: ENSP00000269373.6:p.Phe139Cys
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-113T>G
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe139Cys
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

17-80680718-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680718
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680718
    reference: chr 17
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*134C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*381C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.253C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.274C>G
  hgvsp: ENSP00000444994.1:p.Arg92Gly
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.274C>G
  hgvsp: ENSP00000459653.1:p.Arg92Gly
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.424C>G
  hgvsp: ENSP00000269373.6:p.Arg142Gly
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.234C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*191C>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-105C>G
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8178
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3733
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg142Gly
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

17-80680718-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680718
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680718
    reference: chr 17
allele count: 14
allele frequency: 1.154315490913888e-4
allele num: 121284
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.424C>T
  hgvsp: ENSP00000269373.6:p.Arg142Trp
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.234C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.274C>T
  hgvsp: ENSP00000444994.1:p.Arg92Trp
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*134C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*381C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.274C>T
  hgvsp: ENSP00000459653.1:p.Arg92Trp
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*191C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-105C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.253C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg142Trp
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP

17-80680719-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680719
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680719
    reference: chr 17
allele count: 2
allele frequency: 1.649049323065253e-5
allele num: 121282
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.235G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.254G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*382G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-104G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.425G>C
  hgvsp: ENSP00000269373.6:p.Arg142Pro
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.275G>C
  hgvsp: ENSP00000444994.1:p.Arg92Pro
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.275G>C
  hgvsp: ENSP00000459653.1:p.Arg92Pro
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*192G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*135G>C
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4771
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg142Pro
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

17-80680719-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680719
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680719
    reference: chr 17
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.425G>T
  hgvsp: ENSP00000269373.6:p.Arg142Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.275G>T
  hgvsp: ENSP00000444994.1:p.Arg92Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.235G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*382G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*192G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-104G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.275G>T
  hgvsp: ENSP00000459653.1:p.Arg92Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*135G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.254G>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8184
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3735
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3372
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg142Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

17-80680720-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680720
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680720
    reference: chr 17
allele count: 5
allele frequency: 4.122623307663132e-5
allele num: 121282
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*383G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*193G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.236G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*136G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.276G>A
  hgvsp: ENST00000577128.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.276G>A
  hgvsp: ENST00000535965.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-103G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.255G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.426G>A
  hgvsp: ENST00000269373.6:c.426G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8181
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg142Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

17-80680723-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680723
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680723
    reference: chr 17
allele count: 2
allele frequency: 1.648994937585542e-5
allele num: 121286
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*196T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.239T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*139T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.429T>G
  hgvsp: ENSP00000269373.6:p.Phe143Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.279T>G
  hgvsp: ENSP00000444994.1:p.Phe93Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-100T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.258T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*386T>G
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.279T>G
  hgvsp: ENSP00000459653.1:p.Phe93Leu
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3028
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5128
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Phe143Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

17-80680732-C-CGTGGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680732
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680737
    reference: chr 17
allele count: 3
allele frequency: 2.473777953690877e-5
allele num: 121272
alternate allele: CGTGGT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.250_254dupTGGTG
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*207_*211dupTGGTG
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.440_444dupTGGTG
  hgvsp: ENSP00000269373.6:p.Thr149TrpfsTer2
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.269_273dupTGGTG
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.290_294dupTGGTG
  hgvsp: ENSP00000459653.1:p.Thr99TrpfsTer2
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.290_294dupTGGTG
  hgvsp: ENSP00000444994.1:p.Thr99TrpfsTer2
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*397_*401dupTGGTG
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-89_-85dupTGGTG
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*150_*154dupTGGTG
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2439
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr149TrpfsTer2
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

17-80680732-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680732
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680732
    reference: chr 17
allele count: 32
allele frequency: 2.638696483936935e-4
allele num: 121272
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.438C>T
  hgvsp: ENST00000269373.6:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*205C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*395C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.288C>T
  hgvsp: ENST00000577128.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-91C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.288C>T
  hgvsp: ENST00000535965.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.267C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*148C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.248C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6471
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2439
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp146Asp
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

17-80680735-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680735
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680735
    reference: chr 17
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.441G>C
  hgvsp: ENST00000269373.6:c.441G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*151G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*398G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*208G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.270G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.291G>C
  hgvsp: ENST00000535965.1:c.291G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-88G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.251G>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.291G>C
  hgvsp: ENST00000577128.1:c.291G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val147Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

17-80680735-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680735
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680735
    reference: chr 17
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.291G>T
  hgvsp: ENST00000535965.1:c.291G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*151G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*208G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-88G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.251G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*398G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.270G>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.441G>T
  hgvsp: ENST00000269373.6:c.441G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.291G>T
  hgvsp: ENST00000577128.1:c.291G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5123
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val147Val
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

17-80680740-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680740
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680740
    reference: chr 17
allele count: 7
allele frequency: 5.772243753607652e-5
allele num: 121270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*156C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.296C>T
  hgvsp: ENSP00000444994.1:p.Thr99Met
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-83C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.275C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*213C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.446C>T
  hgvsp: ENSP00000269373.6:p.Thr149Met
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*403C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.296C>T
  hgvsp: ENSP00000459653.1:p.Thr99Met
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.256C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11883
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3032
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3370
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6476
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr149Met
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP

17-80680741-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680741
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680741
    reference: chr 17
allele count: 10
allele frequency: 8.246062505153789e-5
allele num: 121270
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.297G>A
  hgvsp: ENST00000577128.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*157G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.447G>A
  hgvsp: ENST00000269373.6:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.276G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*404G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*214G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.297G>A
  hgvsp: ENST00000535965.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-82G>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.257G>A
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3369
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr149Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum

17-80680751-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680751
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680751
    reference: chr 17
allele count: 1
allele frequency: 8.247286642694553e-6
allele num: 121252
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*167T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.457T>C
  hgvsp: ENSP00000269373.6:p.Tyr153His
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*224T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-72T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.267T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.307T>C
  hgvsp: ENSP00000459653.1:p.Tyr103His
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.307T>C
  hgvsp: ENSP00000444994.1:p.Tyr103His
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*414T>C
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.286T>C
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8186
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11812
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18656
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6467
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Tyr153His
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/17-80680756-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680756
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680756
    reference: chr 17
allele count: 1
allele frequency: 8.248647221855616e-6
allele num: 121232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*229C>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.312C>A
  hgvsp: ENST00000535965.1:c.312C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*172C>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.462C>A
  hgvsp: ENST00000269373.6:c.462C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.291C>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.272C>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.312C>A
  hgvsp: ENST00000577128.1:c.312C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*419C>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-67C>A
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18656
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3740
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu154Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: C
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

17-80680756-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680756
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680756
    reference: chr 17
allele count: 1
allele frequency: 8.248647221855616e-6
allele num: 121232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.312C>T
  hgvsp: ENST00000577128.1:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.462C>T
  hgvsp: ENST00000269373.6:c.462C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.272C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-67C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*419C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.312C>T
  hgvsp: ENST00000535965.1:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*229C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*172C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.291C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2437
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu154Leu
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

17-80680758-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680758
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680758
    reference: chr 17
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*421C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.314C>T
  hgvsp: ENSP00000459653.1:p.Pro105Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.314C>T
  hgvsp: ENSP00000444994.1:p.Pro105Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*231C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*174C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.464C>T
  hgvsp: ENSP00000269373.6:p.Pro155Leu
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.274C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.293C>T
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-65C>T
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2437
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro155Leu
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/17-80680759-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680759
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680759
    reference: chr 17
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  hgvsc: ENST00000576363.1:n.275C>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  hgvsc: ENST00000574206.1:c.*175C>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  hgvsc: ENST00000574832.1:c.*422C>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  hgvsc: ENST00000577128.1:c.315C>A
  hgvsp: ENST00000577128.1:c.315C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  hgvsc: ENST00000574356.1:c.*232C>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  hgvsc: ENST00000269373.6:c.465C>A
  hgvsp: ENST00000269373.6:c.465C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  hgvsc: ENST00000571482.2:n.294C>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  hgvsc: ENST00000573158.1:c.-64C>A
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  hgvsc: ENST00000535965.1:c.315C>A
  hgvsp: ENST00000535965.1:c.315C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3036
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15745
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro155Pro
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

17-80680759-CCAGGTGAGTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80680759
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 80680749
    reference: chr 17
allele count: 2
allele frequency: 1.649702228747711e-5
allele num: 121234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460777
  ensembl transcript: ENST00000574206
  gene symbol: FN3KRP
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000444994
  ensembl transcript: ENST00000535965
  gene symbol: FN3KRP
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000571482
  gene symbol: FN3KRP
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460869
  ensembl transcript: ENST00000574832
  gene symbol: FN3KRP
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000269373
  ensembl transcript: ENST00000269373
  gene symbol: FN3KRP
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000458550
  ensembl transcript: ENST00000574356
  gene symbol: FN3KRP
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl transcript: ENST00000576363
  gene symbol: FN3KRP
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000459653
  ensembl transcript: ENST00000577128
  gene symbol: FN3KRP
  variant of: http://identifiers.org/hgnc/25700
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: 5_prime_UTR_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141560
  ensembl protein: ENSP00000460243
  ensembl transcript: ENST00000573158
  gene symbol: FN3KRP
  variant of: http://identifiers.org/hgnc/25700
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3036
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6463
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: c.468_468+9delGGTGAGTGCA
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: CCAGGTGAGTG

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1039
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1148
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1696
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6624
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516530178950561e-5
allele num: 65940
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.833e0

QD
type: SiteQuality
SIO_000300: 1.455e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.500899e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.24e0

GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6610
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73550850399167e-4
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.99e-1

QD
type: SiteQuality
SIO_000300: 1.024e1

FS
type: SiteQuality
SIO_000300: 4.141e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

DP
type: SiteQuality
SIO_000300: 1.500757e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.68e-1

GenotypeQuality
all individuals: 90
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.893322951138797e-4
allele num: 10274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518372304889159e-5
allele num: 65860
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.99e-1

FS
type: SiteQuality
SIO_000300: 2.091e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

QD
type: SiteQuality
SIO_000300: 1.165e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.06e-1

DP
type: SiteQuality
SIO_000300: 1.497908e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6584
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518372304889159e-5
allele num: 65860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.99e-1

FS
type: SiteQuality
SIO_000300: 2.091e0

QD
type: SiteQuality
SIO_000300: 1.165e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

DP
type: SiteQuality
SIO_000300: 1.497908e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.06e-1

GenotypeQuality
all individuals: 1654
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52031135976648e-5
allele num: 65776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.33e0

DP
type: SiteQuality
SIO_000300: 1.492633e6

VQSLOD
type: SiteQuality
SIO_000300: 7.93e-1

FS
type: SiteQuality
SIO_000300: 1.336e0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.95e-1

QD
type: SiteQuality
SIO_000300: 1.384e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.95e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1146
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.70170553428472e-5
allele num: 11492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16276
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 1.341e1

FS
type: SiteQuality
SIO_000300: 5.902e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.508e0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e-1

MQ
type: SiteQuality
SIO_000300: 5.997e1

DP
type: SiteQuality
SIO_000300: 1.491096e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 386
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GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532097441397273e-5
allele num: 65270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

QD
type: SiteQuality
SIO_000300: 1.081e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.391e0

FS
type: SiteQuality
SIO_000300: 3.187e0

VQSLOD
type: SiteQuality
SIO_000300: -7.779999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

DP
type: SiteQuality
SIO_000300: 1.459068e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1143
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.807468733485996e-5
allele num: 11354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9968
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15828
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

QD
type: SiteQuality
SIO_000300: 1.215e1

MQ
type: SiteQuality
SIO_000300: 5.982e1

MQRankSum
type: SiteQuality
SIO_000300: 1.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.49e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.227e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 1.402056e6

GenotypeQuality
all individuals: 383
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 528
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GenotypeQuality
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GenotypeQuality
all individuals: 122
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1556
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9962
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.702562896778745e-4
allele num: 8506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.321911746112024e-5
allele num: 15818
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64578
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.99e-1

QD
type: SiteQuality
SIO_000300: 1.121e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

DP
type: SiteQuality
SIO_000300: 1.397177e6

FS
type: SiteQuality
SIO_000300: 1.518e0

MQ
type: SiteQuality
SIO_000300: 5.879e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.897e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 178
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1533
bin: 7.25e1
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GenotypeQuality
all individuals: 885
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9950
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.818342151675486e-5
allele num: 11340
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.176193836744295e-4
allele num: 8502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.551638530287984e-4
allele num: 64448
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.27000254000508e-4
allele num: 15748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.592e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

QD
type: SiteQuality
SIO_000300: 1.347e1

DP
type: SiteQuality
SIO_000300: 1.396059e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

GenotypeQuality
all individuals: 5457
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550435672423951e-5
allele num: 64498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15786
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.39409e6

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

FS
type: SiteQuality
SIO_000300: 5.859e0

QD
type: SiteQuality
SIO_000300: 1.258e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 78
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9946
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.313299391531106e-5
allele num: 64424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6292
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

FS
type: SiteQuality
SIO_000300: 1.1777e1

VQSLOD
type: SiteQuality
SIO_000300: -1.575e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-2

QD
type: SiteQuality
SIO_000300: 9.4e0

MQRankSum
type: SiteQuality
SIO_000300: -1.09e-1

DP
type: SiteQuality
SIO_000300: 1.376559e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 68

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.56328164082041e-5
allele num: 63968
num of homozygotes: 0

African
type: Population
allele count: 62
allele frequency: 6.303375355835705e-3
allele num: 9836
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.77210703526493e-4
allele num: 11286
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.412722842118764e-5
allele num: 15594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.5486160397445e-4
allele num: 8454
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.402e1

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.339389e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

GenotypeQuality
all individuals: 1396
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 124

GenotypeQuality
all individuals: 294
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GenotypeQuality
all individuals: 6467
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variant carriers: 0

African
type: Population
allele count: 8
allele frequency: 8.131734092295182e-4
allele num: 9838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.182592242194891e-4
allele num: 8456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.562304711911011e-5
allele num: 64008
num of homozygotes: 0

South Asian
type: Population
allele count: 120
allele frequency: 7.681474843169889e-3
allele num: 15622
num of homozygotes: 1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

DP
type: SiteQuality
SIO_000300: 1.336711e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.309e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.898380494749955e-5
allele num: 11238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15500
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.305e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.098e0

QD
type: SiteQuality
SIO_000300: 2.17e1

DP
type: SiteQuality
SIO_000300: 1.30092e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15436
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.186802753382388e-4
allele num: 8426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.32e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.291956e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.247e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63624
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.749465685110425e-4
allele num: 8422
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6162
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.012e0

MQRankSum
type: SiteQuality
SIO_000300: 4.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.285793e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.19e-1

QD
type: SiteQuality
SIO_000300: 1.21e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6148
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11214
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.190759704691593e-4
allele num: 8398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.574555188159345e-5
allele num: 63510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
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QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.047e0

DP
type: SiteQuality
SIO_000300: 1.279573e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1153
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GenotypeQuality
all individuals: 288
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6128
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15324
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.033698573495969e-4
allele num: 9674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11176
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63410
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.17e-1

QD
type: SiteQuality
SIO_000300: 9.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.356e0

DP
type: SiteQuality
SIO_000300: 1.267477e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

FS
type: SiteQuality
SIO_000300: 1.21e0

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7531
bin: 2.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6084
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.584936761023235e-5
allele num: 63094
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.942e1

DP
type: SiteQuality
SIO_000300: 1.2218e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.302e0

QD
type: SiteQuality
SIO_000300: 1.68e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.173394262503174e-5
allele num: 63024
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6068
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.494e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.186e0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.091e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.370000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

QD
type: SiteQuality
SIO_000300: 1.319e1

DP
type: SiteQuality
SIO_000300: 1.216203e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.173394262503174e-5
allele num: 63024
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.186e0

DP
type: SiteQuality
SIO_000300: 1.216203e6

FS
type: SiteQuality
SIO_000300: 4.494e0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

VQSLOD
type: SiteQuality
SIO_000300: 9.370000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.319e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.091e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6904
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15140
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5998
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.59836327600537e-5
allele num: 62564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

QD
type: SiteQuality
SIO_000300: 1.267e1

VQSLOD
type: SiteQuality
SIO_000300: 5.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

DP
type: SiteQuality
SIO_000300: 1.19359e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.99e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5964
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.044862518089724e-5
allele num: 11056
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.60621928105625e-5
allele num: 62258
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8252
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.408e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 2.56e0

DP
type: SiteQuality
SIO_000300: 1.191032e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.94e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 138

European (Non-Finnish)
type: Population
allele count: 113
allele frequency: 1.819704338303971e-3
allele num: 62098
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 14
allele frequency: 2.355316285329744e-3
allele num: 5944
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11036
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.675567423230974e-4
allele num: 14980
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African
type: Population
allele count: 2
allele frequency: 2.1468441391155e-4
allele num: 9316
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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MQRankSum
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QD
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DP
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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SIO_000300: 4.86e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11020
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61794
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5910
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East Asian
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
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African
type: Population
allele count: 1
allele frequency: 1.073652566029633e-4
allele num: 9314
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

MQ
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 2
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South Asian
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
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allele count: 4
allele frequency: 4.0e-1
allele num: 10
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 6.25e-1
allele num: 16
num of homozygotes: 2

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
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FS
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VQSLOD
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 3.314e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
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East Asian
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VQSLOD
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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South Asian
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BaseQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
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FS
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InbreedingCoeff
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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Latino
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Other
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European (Non-Finnish)
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DP
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MQ
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QD
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FS
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MQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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South Asian
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European (Finnish)
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East Asian
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BaseQRankSum
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ClippingRankSum
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MQ
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QD
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DP
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FS
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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South Asian
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European (Non-Finnish)
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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MQ
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BaseQRankSum
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QD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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European (Non-Finnish)
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European (Finnish)
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FS
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QD
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MQ
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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DP
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Latino
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European (Non-Finnish)
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African
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East Asian
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MQ
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DP
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VQSLOD
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InbreedingCoeff
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FS
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ClippingRankSum
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DP
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VQSLOD
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InbreedingCoeff
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African
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European (Finnish)
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East Asian
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European (Non-Finnish)
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VQSLOD
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DP
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MQ
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66224
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 1
allele frequency: 6.137981831573779e-5
allele num: 16292
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VQSLOD
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ClippingRankSum
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QD
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ReadPosRankSum
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MQRankSum
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FS
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MQ
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BaseQRankSum
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DP
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InbreedingCoeff
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SIO_000300: 7.6e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.506750241080039e-5
allele num: 66368
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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SIO_000300: 7.8e-1

InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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QD
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DP
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FS
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ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 5.984e1

MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.156871818602499e-4
allele num: 8644
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BaseQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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VQSLOD
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MQ
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SIO_000300: 6.0e1

MQRankSum
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DP
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FS
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ClippingRankSum
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SIO_000300: 4.7e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66404
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.156e0

MQ
type: SiteQuality
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ReadPosRankSum
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VQSLOD
type: SiteQuality
SIO_000300: -7.938e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66404
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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ReadPosRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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MQRankSum
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MQ
type: SiteQuality
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ClippingRankSum
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.312e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 66420
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Latino
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allele frequency: 0.0e0
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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African
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QD
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MQ
type: SiteQuality
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InbreedingCoeff
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FS
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MQRankSum
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VQSLOD
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BaseQRankSum
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 13

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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European (Finnish)
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allele frequency: 9.096422073984233e-4
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European (Non-Finnish)
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allele frequency: 1.053138352289824e-4
allele num: 66468
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Other
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South Asian
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BaseQRankSum
type: SiteQuality
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QD
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ClippingRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

Other
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East Asian
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African
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European (Non-Finnish)
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South Asian
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allele num: 16496
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European (Finnish)
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MQRankSum
type: SiteQuality
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FS
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VQSLOD
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MQ
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 908
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQRankSum
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FS
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DP
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VQSLOD
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 5.771450557906887e-4
allele num: 10396
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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FS
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MQRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
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allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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DP
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ClippingRankSum
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SIO_000300: 5.610000000000001e-1

MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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VQSLOD
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FS
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.002462018855461e-5
allele num: 66612
num of homozygotes: 0

African
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allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele num: 16510
num of homozygotes: 0

East Asian
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VQSLOD
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MQ
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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QD
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FS
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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allele num: 10400
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Latino
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South Asian
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allele num: 16510
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QD
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InbreedingCoeff
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MQ
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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FS
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VQSLOD
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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European (Non-Finnish)
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East Asian
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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DP
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MQRankSum
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QD
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FS
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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South Asian
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European (Finnish)
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African
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East Asian
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MQRankSum
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FS
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DP
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Finnish)
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Other
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Latino
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European (Non-Finnish)
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MQ
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DP
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VQSLOD
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FS
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QD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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ReadPosRankSum
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FS
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DP
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QD
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InbreedingCoeff
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SIO_000300: -1.0e-4

MQ
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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SIO_000300: 3.99e-1

MQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500915558490679e-5
allele num: 66626
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele frequency: 1.036627505183138e-3
allele num: 11576
num of homozygotes: 0

MQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
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QD
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 1.923076923076923e-4
allele num: 10400
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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FS
type: SiteQuality
SIO_000300: 4.212e0

BaseQRankSum
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SIO_000300: 1.8e-2

QD
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MQ
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.282228e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.921e1

MQRankSum
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.49e-1

QD
type: SiteQuality
SIO_000300: 1.147e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.95e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 6.003662233962717e-5
allele num: 66626
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

DP
type: SiteQuality
SIO_000300: 2.282367e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.62e-1

BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.974e1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.092e0

VQSLOD
type: SiteQuality
SIO_000300: 8.72e-1

InbreedingCoeff
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QD
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SIO_000300: 1.242e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66630
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South Asian
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African
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FS
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InbreedingCoeff
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ClippingRankSum
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QD
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VQSLOD
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DP
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
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European (Finnish)
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African
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allele num: 10400
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Other
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East Asian
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South Asian
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DP
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MQ
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FS
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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African
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European (Finnish)
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Other
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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VQSLOD
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QD
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MQ
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ClippingRankSum
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FS
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66622
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East Asian
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European (Finnish)
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African
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Latino
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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VQSLOD
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FS
type: SiteQuality
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DP
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: 0.0e0

MQRankSum
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SIO_000300: 9.62e-1

BaseQRankSum
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SIO_000300: 3.33e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.14e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66622
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
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DP
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VQSLOD
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MQ
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ClippingRankSum
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QD
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FS
type: SiteQuality
SIO_000300: 5.610000000000001e-1

MQRankSum
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InbreedingCoeff
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 3.33e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

African
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allele frequency: 2.884615384615385e-4
allele num: 10400
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 4.503152206544582e-5
allele num: 66620
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
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allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
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SIO_000300: 0.0e0

QD
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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MQ
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SIO_000300: 5.916e1

DP
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SIO_000300: 2.282252e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
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allele count: 10
allele frequency: 1.155535012710885e-3
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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SIO_000300: -8.400000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.926e1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.04e1

FS
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SIO_000300: 1.805e0

DP
type: SiteQuality
SIO_000300: 2.282568e6

BaseQRankSum
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SIO_000300: -1.586e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66606
num of homozygotes: 0

South Asian
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allele num: 16506
num of homozygotes: 0

DP
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VQSLOD
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InbreedingCoeff
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FS
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MQRankSum
type: SiteQuality
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MQ
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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QD
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SIO_000300: 1.207e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501636784094663e-5
allele num: 66594
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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African
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QD
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MQ
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VQSLOD
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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East Asian
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South Asian
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European (Non-Finnish)
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allele num: 66594
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European (Finnish)
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ReadPosRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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FS
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BaseQRankSum
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MQ
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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South Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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MQ
type: SiteQuality
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MQRankSum
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DP
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QD
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 9.615384615384615e-5
allele num: 10400
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South Asian
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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Other
type: Population
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DP
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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SIO_000300: 4.49e-1

FS
type: SiteQuality
SIO_000300: 3.436e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.45e0

QD
type: SiteQuality
SIO_000300: 5.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.96e-1

MQ
type: SiteQuality
SIO_000300: 5.302e1

GenotypeQuality
all individuals: 15745
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3739
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2437
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3377
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5122
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4774
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18655
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00336376741951e-5
allele num: 66592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0