X-153184660-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184660
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184660
    reference: chr 0
allele count: 1
allele frequency: 1.139523223483295e-5
allele num: 87756
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.696C>T
  hgvsp: ENST00000370016.1:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.690C>T
  hgvsp: ENST00000537206.1:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1173C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*133C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.690C>T
  hgvsp: ENST00000461052.1:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.759C>T
  hgvsp: ENST00000420383.1:c.759C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.690C>T
  hgvsp: ENST00000488269.1:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.879C>T
  hgvsp: ENST00000370028.3:c.879C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1890C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.759C>T
  hgvsp: ENST00000350060.5:c.759C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-153C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.84C>T
  hgvsp: ENST00000422918.1:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.421C>T
  hgvsp: ENST00000418750.1:c.421C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2158C>T
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val293Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP

X-153184684-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184684
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184684
    reference: chr 0
allele count: 1
allele frequency: 1.139536208763033e-5
allele num: 87755
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.397G>A
  hgvsp: ENST00000418750.1:c.397G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.735G>A
  hgvsp: ENST00000420383.1:c.735G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1149G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.672G>A
  hgvsp: ENST00000370016.1:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-177G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*109G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.855G>A
  hgvsp: ENST00000370028.3:c.855G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.666G>A
  hgvsp: ENST00000461052.1:c.666G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.735G>A
  hgvsp: ENST00000350060.5:c.735G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.666G>A
  hgvsp: ENST00000537206.1:c.666G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.666G>A
  hgvsp: ENST00000488269.1:c.666G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2134G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1866G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.60G>A
  hgvsp: ENST00000422918.1:c.60G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4983
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu285Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-153184687-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184687
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184687
    reference: chr 0
allele count: 11
allele frequency: 1.253504113772591e-4
allele num: 87754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-180C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.663C>T
  hgvsp: ENST00000488269.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1146C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.394C>T
  hgvsp: ENST00000418750.1:c.394C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.732C>T
  hgvsp: ENST00000420383.1:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1863C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.663C>T
  hgvsp: ENST00000461052.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.663C>T
  hgvsp: ENST00000537206.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.732C>T
  hgvsp: ENST00000350060.5:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.852C>T
  hgvsp: ENST00000370028.3:c.852C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2131C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*106C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.57C>T
  hgvsp: ENST00000422918.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.669C>T
  hgvsp: ENST00000370016.1:c.669C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8900
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4983
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asn284Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

X-153184693-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184693
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184693
    reference: chr 0
allele count: 3
allele frequency: 3.418764458524689e-5
allele num: 87751
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.657G>A
  hgvsp: ENST00000461052.1:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.663G>A
  hgvsp: ENST00000370016.1:c.663G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.657G>A
  hgvsp: ENST00000537206.1:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.726G>A
  hgvsp: ENST00000420383.1:c.726G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.388G>A
  hgvsp: ENST00000418750.1:c.388G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.51G>A
  hgvsp: ENST00000422918.1:c.51G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1140G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.657G>A
  hgvsp: ENST00000488269.1:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.726G>A
  hgvsp: ENST00000350060.5:c.726G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-186G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.846G>A
  hgvsp: ENST00000370028.3:c.846G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1857G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*100G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2125G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala282Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

X-153184715-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184715
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184715
    reference: chr 0
allele count: 5
allele frequency: 5.698395331874544e-5
allele num: 87744
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-208A>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.641A>C
  hgvsp: ENSP00000359033.1:p.His214Pro
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.635A>C
  hgvsp: ENSP00000444169.1:p.His212Pro
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.366A>C
  hgvsp: ENSP00000411712.1:p.His123Pro
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.29A>C
  hgvsp: ENSP00000398019.1:p.His10Pro
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.704A>C
  hgvsp: ENSP00000397533.1:p.His235Pro
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.635A>C
  hgvsp: ENSP00000473840.1:p.His212Pro
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.824A>C
  hgvsp: ENSP00000359045.3:p.His275Pro
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1835A>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.704A>C
  hgvsp: ENSP00000203786.7:p.His235Pro
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1118A>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*78A>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.635A>C
  hgvsp: ENSP00000473936.1:p.His212Pro
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2103A>C
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5011
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His275Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD

X-153184728-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184728
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184728
    reference: chr 0
allele count: 2
allele frequency: 2.283443890075011e-5
allele num: 87587
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.16A>C
  hgvsp: ENSP00000398019.1:p.Lys6Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.622A>C
  hgvsp: ENSP00000473936.1:p.Lys208Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.622A>C
  hgvsp: ENSP00000444169.1:p.Lys208Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.691A>C
  hgvsp: ENSP00000203786.7:p.Lys231Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-221A>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.353A>C
  hgvsp: ENSP00000411712.1:p.Lys119Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2090A>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.691A>C
  hgvsp: ENSP00000397533.1:p.Lys231Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.622A>C
  hgvsp: ENSP00000473840.1:p.Lys208Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1105A>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*65A>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.811A>C
  hgvsp: ENSP00000359045.3:p.Lys271Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.628A>C
  hgvsp: ENSP00000359033.1:p.Lys210Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1822A>C
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 7458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys271Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

X-153184730-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184730
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184730
    reference: chr 0
allele count: 33
allele frequency: 3.957831108552513e-4
allele num: 83379
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1103C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.620C>G
  hgvsp: ENSP00000473936.1:p.Ala207Gly
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.689C>G
  hgvsp: ENSP00000397533.1:p.Ala230Gly
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.809C>G
  hgvsp: ENSP00000359045.3:p.Ala270Gly
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.14C>G
  hgvsp: ENSP00000398019.1:p.Ala5Gly
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.620C>G
  hgvsp: ENSP00000473840.1:p.Ala207Gly
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.689C>G
  hgvsp: ENSP00000203786.7:p.Ala230Gly
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.620C>G
  hgvsp: ENSP00000444169.1:p.Ala207Gly
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*63C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.351C>G
  hgvsp: ENSP00000411712.1:p.Ala118Gly
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1820C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.626C>G
  hgvsp: ENSP00000359033.1:p.Ala209Gly
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2088C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-223C>G
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7799
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Ala270Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

X-153184749-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184749
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184749
    reference: chr 0
allele count: 1
allele frequency: 1.139795976520203e-5
allele num: 87735
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-12T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-12T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-12T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.344-12T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.802-12T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-12T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-12T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1801T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2069T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-12T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-12T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-12T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-242T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-12T>C
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

X-153184751-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184751
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184751
    reference: chr 0
allele count: 4
allele frequency: 4.55933980759586e-5
allele num: 87732
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-14A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-14A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-14A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-244A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.802-14A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2067A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-14A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1799A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.344-14A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-14A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-14A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-14A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-14A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-14A>G
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3845
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

X-153184756-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184756
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184756
    reference: chr 0
allele count: 1
allele frequency: 1.139873929943348e-5
allele num: 87729
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-19C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-19C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-19C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1794C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2062C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.344-19C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.802-19C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-19C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-19C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-19C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-19C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-249C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-19C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-19C>T
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6123
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8079
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

X-153184758-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184758
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184758
    reference: chr 0
allele count: 5
allele frequency: 5.69956455326813e-5
allele num: 87726
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.802-21C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1792C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-21C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-21C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-21C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-21C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2060C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-21C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-21C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-21C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-21C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-251C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-21C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.344-21C>T
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3848
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ

X-153184766-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184766
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184766
    reference: chr 0
allele count: 1
allele frequency: 1.140016872249709e-5
allele num: 87718
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-29C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-259C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-29C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-29C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-29C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-29C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1784C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-29C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-29C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.344-29C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-29C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2052C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.802-29C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-29C>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6110
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

X-153184770-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184770
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184770
    reference: chr 0
allele count: 11
allele frequency: 1.254204435322958e-4
allele num: 87705
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-263G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2048G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-33G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-33G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-33G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.802-33G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-33G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-33G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.344-33G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-33G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1780G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-33G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-33G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-33G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 1
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

X-153184771-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184771
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184771
    reference: chr 0
allele count: 317
allele frequency: 3.614636426869178e-3
allele num: 87699
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1779C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-264C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-34C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-34C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2047C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.802-34C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-34C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-34C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.344-34C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-34C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-34C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-34C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-34C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-34C>T
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 5.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 9.75e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 5671
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 6.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6060
  bin: 3.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 5102
  bin: 4.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 7123
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 7707
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 5.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 7.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

X-153184774-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184774
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184774
    reference: chr 0
allele count: 2
allele frequency: 2.280995882802432e-5
allele num: 87681
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.802-37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2044G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-267G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1776G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.344-37G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5620
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ

X-153184775-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184775
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184775
    reference: chr 0
allele count: 1
allele frequency: 1.140328870846352e-5
allele num: 87694
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.802-38C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2043C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-38C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.344-38C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-38C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-38C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-38C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-38C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-268C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-38C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-38C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-38C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1775C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-38C>T
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6070
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

X-153184781-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184781
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184781
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 87697
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-44T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-274T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2037T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-44T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.802-44T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-44T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-44T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-44T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-44T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.344-44T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-44T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-44T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1769T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-44T>C
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7471
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2940
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

X-153184784-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184784
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184784
    reference: chr 0
allele count: 2
allele frequency: 2.28094385456702e-5
allele num: 87683
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-47G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-47G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.802-47G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-277G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-47G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-47G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1766G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+2034G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-47G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-47G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-47G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.344-47G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-47G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-47G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2940
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

X-153184979-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184979
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184979
    reference: chr 0
allele count: 1
allele frequency: 1.032951141411011e-4
allele num: 9681
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.343+42G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-242G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-242G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-242G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-242G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-242G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-242G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-242G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1839G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-242G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-242G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1571G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.801+42G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-472G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

X-153184992-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184992
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184992
    reference: chr 0
allele count: 1
allele frequency: 1.03359173126615e-4
allele num: 9675
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1558C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-255C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-255C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-255C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-255C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-255C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-255C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-255C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-255C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1826C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-485C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-255C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.801+29C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.343+29C>G
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18011
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4523
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

X-153184997-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153184997
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153184997
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 9721
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-260A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-260A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.801+24A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-260A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1553A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-260A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-260A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-490A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.343+24A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-260A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1821A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-260A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-260A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-260A>G
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16458
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

X-153185002-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185002
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185002
    reference: chr 0
allele count: 1
allele frequency: 1.027326895418122e-4
allele num: 9734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1548G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-265G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-495G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-265G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-265G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-265G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.801+19G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-265G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-265G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.343+19G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-265G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1816G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-265G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-265G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14336
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

X-153185004-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185004
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185004
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 9854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-267C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-267C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.801+17C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-267C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-267C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-267C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-497C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-267C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1814C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-267C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.343+17C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1546C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-267C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-267C>T
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14328
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

X-153185014-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185014
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185014
    reference: chr 0
allele count: 1
allele frequency: 9.94431185361973e-5
allele num: 10056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-277G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-277G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-277G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-277G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-277G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1536G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-507G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.801+7G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-277G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1804G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-277G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.343+7G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-277G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-277G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11545
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.801+7G>A
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD

X-153185031-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185031
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185031
    reference: chr 0
allele count: 1
allele frequency: 9.254974548819991e-5
allele num: 10805
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-294C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.791C>G
  hgvsp: ENSP00000359045.3:p.Ser264Cys
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-524C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-294C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-294C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.333C>G
  hgvsp: ENSP00000411712.1:p.Ser112Cys
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-294C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-294C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-294C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-294C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1519C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-294C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-294C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1787C>G
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7956
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser264Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD

X-153185039-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185039
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185039
    reference: chr 0
allele count: 1
allele frequency: 8.86053517632465e-5
allele num: 11286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-302C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.783C>T
  hgvsp: ENST00000370028.3:c.783C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.325C>T
  hgvsp: ENST00000418750.1:c.325C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1779C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1511C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-302C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-302C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-302C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-302C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-302C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-532C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-302C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-302C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-302C>T
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys261Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

X-153185069-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185069
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185069
    reference: chr 0
allele count: 1
allele frequency: 7.888301648655044e-5
allele num: 12677
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.295C>T
  hgvsp: ENST00000418750.1:c.295C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-332C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-332C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-332C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.753C>T
  hgvsp: ENST00000370028.3:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-332C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1481C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-332C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-332C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-332C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1749C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-562C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-332C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-332C>T
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu251Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

X-153185079-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185079
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185079
    reference: chr 0
allele count: 1
allele frequency: 7.816163826793809e-5
allele num: 12794
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-342C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-342C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-342C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-572C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-342C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-342C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.743C>G
  hgvsp: ENSP00000359045.3:p.Ala248Gly
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-342C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.285C>G
  hgvsp: ENSP00000411712.1:p.Ala96Gly
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1471C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-342C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-342C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1739C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-342C>G
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3800
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala248Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ

X-153185084-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185084
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185084
    reference: chr 0
allele count: 1
allele frequency: 7.838833581563063e-5
allele num: 12757
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-347C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-347C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-347C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-347C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-577C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-347C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-347C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-347C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-347C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1734C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-347C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.280C>G
  hgvsp: ENST00000418750.1:c.280C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.738C>G
  hgvsp: ENST00000370028.3:c.738C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1466C>G
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3640
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu246Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ

X-153185089-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185089
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185089
    reference: chr 0
allele count: 1
allele frequency: 7.885191610156126e-5
allele num: 12682
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.275T>C
  hgvsp: ENSP00000411712.1:p.Trp93Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.733T>C
  hgvsp: ENSP00000359045.3:p.Trp245Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-352T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1729T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-352T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-352T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-352T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-352T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-352T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-352T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1461T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-352T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-582T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-352T>C
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp245Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD

X-153185091-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185091
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185091
    reference: chr 0
allele count: 1
allele frequency: 7.948493760432397e-5
allele num: 12581
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-354G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.273G>A
  hgvsp: ENSP00000411712.1:p.Cys92Tyr
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-354G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.731G>A
  hgvsp: ENSP00000359045.3:p.Cys244Tyr
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-354G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-354G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-354G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-584G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1727G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-354G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1459G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-354G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-354G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-354G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3291
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys244Tyr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

X-153185114-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185114
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185114
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 11878
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-377C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-377C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-377C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-607C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.708C>T
  hgvsp: ENST00000370028.3:c.708C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.250C>T
  hgvsp: ENST00000418750.1:c.250C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1436C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-377C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-377C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-377C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-377C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-377C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1704C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-377C>T
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: synonymous
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala236Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

X-153185114-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185114
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185114
    reference: chr 0
allele count: 3
allele frequency: 2.525677723522478e-4
allele num: 11878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.250C>A
  hgvsp: ENST00000418750.1:c.250C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1704C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1436C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-377C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-377C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-377C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-377C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-607C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-377C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-377C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.708C>A
  hgvsp: ENST00000370028.3:c.708C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-377C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-377C>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-377C>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala236Ala
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

X-153185114-GGCCACAGGCCTCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185114
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185101
    reference: chr 0
allele count: 2
allele frequency: 1.683785149014986e-4
allele num: 11878
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsp: ENSP00000411712.1:p.Gln80ProfsTer?
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsp: ENSP00000359045.3:p.Gln232ProfsTer184
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln232ProfsTer184
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: GGCCACAGGCCTCT
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

X-153185123-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185123
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185123
    reference: chr 0
allele count: 1
allele frequency: 8.95335303071e-5
allele num: 11169
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-386G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-386G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.241G>T
  hgvsp: ENSP00000411712.1:p.Arg81Ser
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1695G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-386G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.699G>T
  hgvsp: ENSP00000359045.3:p.Arg233Ser
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-386G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-386G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-386G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-386G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-616G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1427G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-386G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-386G>T
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg233Ser
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

X-153185132-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185132
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185132
    reference: chr 0
allele count: 1
allele frequency: 9.399379640943698e-5
allele num: 10639
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-395C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-625C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.690C>G
  hgvsp: ENST00000370028.3:c.690C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-395C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-395C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.232C>G
  hgvsp: ENST00000418750.1:c.232C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-395C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-395C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-395C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-395C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1418C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1686C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-395C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-395C>G
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2756
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro230Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-153185160-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185160
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185160
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 8710
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1390G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-423G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-423G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1658G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.682-20G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.224-20G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-653G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-423G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-423G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-423G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-423G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-423G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-423G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-423G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ

X-153185187-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153185187
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153185187
    reference: chr 0
allele count: 1
allele frequency: 1.270809505655102e-4
allele num: 7869
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.613-450C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.619-450C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.224-47C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.613-450C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+1631C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*56-450C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.682-450C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.613-450C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1096-450C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+1363C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.682-450C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.682-47C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.478-680C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.7-450C>T
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

X-153186029-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186029
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186029
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 48242
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.333C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.681+51C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.612+51C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*55+51C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+789C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.681+51C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.681+51C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.612+51C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+521C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.612+51C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.6+51C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+789C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.618+51C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1095+51C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.223+51C>T
  variant of: http://identifiers.org/hgnc/674
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15003
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD

X-153186037-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186037
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186037
    reference: chr 0
allele count: 2
allele frequency: 4.107029180442327e-5
allele num: 48697
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.612+43G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.223+43G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.325G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+513G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.6+43G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.618+43G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.612+43G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.681+43G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+781G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+781G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.612+43G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.681+43G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*55+43G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.681+43G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1095+43G>A
  variant of: http://identifiers.org/hgnc/674
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9549
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21037
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6195
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14994
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

X-153186041-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186041
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186041
    reference: chr 0
allele count: 1
allele frequency: 2.024373456415239e-5
allele num: 49398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.321C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.612+39C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*55+39C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.612+39C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.612+39C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1095+39C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.618+39C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.223+39C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.681+39C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+777C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+509C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.6+39C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.681+39C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.681+39C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+777C>T
  variant of: http://identifiers.org/hgnc/674
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 21550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14516
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8229
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8731
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

X-153186043-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186043
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186043
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 49696
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.681+37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.319G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.681+37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.681+37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.612+37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1095+37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+775G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.618+37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.6+37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.223+37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+775G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+507G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.612+37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*55+37G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.612+37G>A
  variant of: http://identifiers.org/hgnc/674
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21687
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

X-153186050-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186050
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186050
    reference: chr 0
allele count: 199
allele frequency: 3.88383621530895e-3
allele num: 51238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.612+30C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+768C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.6+30C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+500C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.681+30C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.681+30C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.681+30C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1095+30C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.312C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+768C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*55+30C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.612+30C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.223+30C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.618+30C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.612+30C>T
  variant of: http://identifiers.org/hgnc/674
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 1.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22304
  bin: 7.5e0
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

X-153186055-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186055
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186055
    reference: chr 0
allele count: 1
allele frequency: 1.895303438080437e-5
allele num: 52762
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+495G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.223+25G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.612+25G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.307G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.612+25G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1095+25G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.681+25G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.612+25G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.681+25G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.681+25G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+763G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+763G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.618+25G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*55+25G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.6+25G>A
  variant of: http://identifiers.org/hgnc/674
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5897
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15579
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-153186056-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186056
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186056
    reference: chr 0
allele count: 7
allele frequency: 1.306311349979472e-4
allele num: 53586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+494C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+762C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.223+24C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.681+24C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.306C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.612+24C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.681+24C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+762C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.681+24C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*55+24C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.618+24C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.612+24C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1095+24C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.6+24C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.612+24C>T
  variant of: http://identifiers.org/hgnc/674
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5523
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16842
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

X-153186057-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186057
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186057
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 54066
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.681+23A>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+493A>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.681+23A>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+761A>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.305A>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*55+23A>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.612+23A>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.681+23A>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1095+23A>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.6+23A>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.223+23A>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.618+23A>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.612+23A>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.612+23A>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+761A>T
  variant of: http://identifiers.org/hgnc/674
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 17396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22099
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5388
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP

X-153186069-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186069
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186069
    reference: chr 0
allele count: 4
allele frequency: 6.744680133544667e-5
allele num: 59306
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.681+11A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.612+11A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*55+11A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.223+11A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.293A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+749A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.681+11A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.681+11A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+481A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.618+11A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.6+11A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.612+11A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.612+11A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1095+11A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+749A>G
  variant of: http://identifiers.org/hgnc/674
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19905
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22462
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4386
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

X-153186070-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186070
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186070
    reference: chr 0
allele count: 1
allele frequency: 1.672940192388122e-5
allele num: 59775
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*55+10G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.6+10G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.681+10G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.681+10G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.612+10G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.292G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+480G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+748G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1095+10G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.612+10G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+748G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.612+10G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.618+10G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.681+10G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.223+10G>C
  variant of: http://identifiers.org/hgnc/674
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19669
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

X-153186072-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186072
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186072
    reference: chr 0
allele count: 1
allele frequency: 1.638860664066341e-5
allele num: 61018
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.6+8T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*55+8T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.681+8T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.223+8T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.681+8T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.612+8T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1095+8T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+478T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.681+8T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.290T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.612+8T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.618+8T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+746T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+746T>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.612+8T>C
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.681+8T>C
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP

X-153186083-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186083
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186083
    reference: chr 0
allele count: 1
allele frequency: 1.500217531542074e-5
allele num: 66657
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+735G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+467G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398019
  ensembl transcript: ENST00000422918
  gene symbol: ARHGAP4
  hgvsc: ENST00000422918.1:c.3G>A
  hgvsp: ENST00000422918.1:c.3G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.609G>A
  hgvsp: ENST00000461052.1:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.678G>A
  hgvsp: ENST00000370028.3:c.678G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.609G>A
  hgvsp: ENST00000537206.1:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.678G>A
  hgvsp: ENST00000420383.1:c.678G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1092G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.609G>A
  hgvsp: ENST00000488269.1:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.279G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*52G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.615G>A
  hgvsp: ENST00000370016.1:c.615G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.678G>A
  hgvsp: ENST00000350060.5:c.678G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+735G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.220G>A
  hgvsp: ENST00000418750.1:c.220G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu226Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-153186088-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186088
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186088
    reference: chr 0
allele count: 27
allele frequency: 3.905571949314355e-4
allele num: 69132
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.215G>A
  hgvsp: ENSP00000411712.1:p.Val73Met
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.673G>A
  hgvsp: ENSP00000397533.1:p.Val225Met
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*47G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1087G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.274G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.604G>A
  hgvsp: ENSP00000473840.1:p.Val202Met
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.673G>A
  hgvsp: ENSP00000203786.7:p.Val225Met
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+462G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.610G>A
  hgvsp: ENSP00000359033.1:p.Val204Met
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.673G>A
  hgvsp: ENSP00000359045.3:p.Val225Met
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.604G>A
  hgvsp: ENSP00000444169.1:p.Val202Met
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.604G>A
  hgvsp: ENSP00000473936.1:p.Val202Met
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+730G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+730G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13971
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val225Met
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

X-153186089-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186089
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186089
    reference: chr 0
allele count: 1
allele frequency: 1.436513294930545e-5
allele num: 69613
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.603G>A
  hgvsp: ENST00000461052.1:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.672G>A
  hgvsp: ENST00000420383.1:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.672G>A
  hgvsp: ENST00000350060.5:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+461G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*46G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.609G>A
  hgvsp: ENST00000370016.1:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+729G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.273G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.672G>A
  hgvsp: ENST00000370028.3:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.603G>A
  hgvsp: ENST00000537206.1:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.214G>A
  hgvsp: ENST00000418750.1:c.214G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.603G>A
  hgvsp: ENST00000488269.1:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1086G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+729G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu224Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

X-153186099-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186099
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186099
    reference: chr 0
allele count: 2
allele frequency: 2.68100108580544e-5
allele num: 74599
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.204G>C
  hgvsp: ENSP00000411712.1:p.Gly69Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.662G>C
  hgvsp: ENSP00000397533.1:p.Gly221Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+719G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.593G>C
  hgvsp: ENSP00000473936.1:p.Gly198Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.662G>C
  hgvsp: ENSP00000359045.3:p.Gly221Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1076G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+719G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.593G>C
  hgvsp: ENSP00000444169.1:p.Gly198Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.662G>C
  hgvsp: ENSP00000203786.7:p.Gly221Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.263G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.599G>C
  hgvsp: ENSP00000359033.1:p.Gly200Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+451G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.593G>C
  hgvsp: ENSP00000473840.1:p.Gly198Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*36G>C
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly221Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum

X-153186101-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186101
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186101
    reference: chr 0
allele count: 1
allele frequency: 1.327686241187482e-5
allele num: 75319
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.660G>C
  hgvsp: ENSP00000397533.1:p.Lys220Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.591G>C
  hgvsp: ENSP00000473936.1:p.Lys197Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.597G>C
  hgvsp: ENSP00000359033.1:p.Lys199Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+717G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1074G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.591G>C
  hgvsp: ENSP00000473840.1:p.Lys197Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.591G>C
  hgvsp: ENSP00000444169.1:p.Lys197Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.261G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+449G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.660G>C
  hgvsp: ENSP00000203786.7:p.Lys220Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*34G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+717G>C
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.202G>C
  hgvsp: ENSP00000411712.1:p.Lys68Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.660G>C
  hgvsp: ENSP00000359045.3:p.Lys220Asn
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8330
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9494
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys220Asn
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

X-153186105-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186105
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186105
    reference: chr 0
allele count: 2
allele frequency: 2.615370532620209e-5
allele num: 76471
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.587A>G
  hgvsp: ENSP00000444169.1:p.Lys196Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.656A>G
  hgvsp: ENSP00000203786.7:p.Lys219Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1070A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*30A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.656A>G
  hgvsp: ENSP00000359045.3:p.Lys219Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.593A>G
  hgvsp: ENSP00000359033.1:p.Lys198Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.257A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+713A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+445A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.587A>G
  hgvsp: ENSP00000473840.1:p.Lys196Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.656A>G
  hgvsp: ENSP00000397533.1:p.Lys219Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.587A>G
  hgvsp: ENSP00000473936.1:p.Lys196Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+713A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.198A>G
  hgvsp: ENSP00000411712.1:p.Lys67Arg
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8640
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys219Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

X-153186107-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186107
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186107
    reference: chr 0
allele count: 3
allele frequency: 3.886262063605156e-5
allele num: 77195
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.591C>G
  hgvsp: ENST00000370016.1:c.591C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+443C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1068C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.255C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.196C>G
  hgvsp: ENST00000418750.1:c.196C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.585C>G
  hgvsp: ENST00000488269.1:c.585C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.585C>G
  hgvsp: ENST00000537206.1:c.585C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.654C>G
  hgvsp: ENST00000370028.3:c.654C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.654C>G
  hgvsp: ENST00000420383.1:c.654C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+711C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.585C>G
  hgvsp: ENST00000461052.1:c.585C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.654C>G
  hgvsp: ENST00000350060.5:c.654C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+711C>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*28C>G
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu218Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

X-153186117-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186117
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186117
    reference: chr 0
allele count: 1
allele frequency: 1.255713496408659e-5
allele num: 79636
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.644A>G
  hgvsp: ENSP00000397533.1:p.Lys215Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1058A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.644A>G
  hgvsp: ENSP00000203786.7:p.Lys215Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.245A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+701A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.581A>G
  hgvsp: ENSP00000359033.1:p.Lys194Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.644A>G
  hgvsp: ENSP00000359045.3:p.Lys215Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.575A>G
  hgvsp: ENSP00000444169.1:p.Lys192Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.186A>G
  hgvsp: ENSP00000411712.1:p.Lys63Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.575A>G
  hgvsp: ENSP00000473840.1:p.Lys192Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.575A>G
  hgvsp: ENSP00000473936.1:p.Lys192Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+433A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+701A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*18A>G
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38305
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys215Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

X-153186120-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186120
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186120
    reference: chr 0
allele count: 1
allele frequency: 1.246805062028552e-5
allele num: 80205
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.641G>T
  hgvsp: ENSP00000203786.7:p.Arg214Leu
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.572G>T
  hgvsp: ENSP00000473936.1:p.Arg191Leu
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.641G>T
  hgvsp: ENSP00000397533.1:p.Arg214Leu
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.242G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*15G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.183G>T
  hgvsp: ENSP00000411712.1:p.Arg62Leu
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.572G>T
  hgvsp: ENSP00000473840.1:p.Arg191Leu
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1055G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.578G>T
  hgvsp: ENSP00000359033.1:p.Arg193Leu
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.572G>T
  hgvsp: ENSP00000444169.1:p.Arg191Leu
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+698G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+698G>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.641G>T
  hgvsp: ENSP00000359045.3:p.Arg214Leu
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+430G>T
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg214Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS

X-153186120-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186120
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186120
    reference: chr 0
allele count: 1
allele frequency: 1.246805062028552e-5
allele num: 80205
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.183G>A
  hgvsp: ENSP00000411712.1:p.Arg62His
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.242G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.641G>A
  hgvsp: ENSP00000359045.3:p.Arg214His
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.578G>A
  hgvsp: ENSP00000359033.1:p.Arg193His
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.572G>A
  hgvsp: ENSP00000473840.1:p.Arg191His
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1055G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.572G>A
  hgvsp: ENSP00000473936.1:p.Arg191His
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+430G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+698G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.641G>A
  hgvsp: ENSP00000203786.7:p.Arg214His
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.641G>A
  hgvsp: ENSP00000397533.1:p.Arg214His
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.572G>A
  hgvsp: ENSP00000444169.1:p.Arg191His
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.*15G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+698G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg214His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

X-153186140-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186140
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186140
    reference: chr 0
allele count: 7
allele frequency: 8.403361344537815e-5
allele num: 83300
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.621C>T
  hgvsp: ENST00000370028.3:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.558C>T
  hgvsp: ENST00000370016.1:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.621C>T
  hgvsp: ENST00000350060.5:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+678C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.163C>T
  hgvsp: ENST00000418750.1:c.163C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+678C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.621C>T
  hgvsp: ENST00000420383.1:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+410C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.552C>T
  hgvsp: ENST00000537206.1:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1035C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.649C>T
  hgvsp: ENSP00000385042.2:p.His217Tyr
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.552C>T
  hgvsp: ENST00000488269.1:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.552C>T
  hgvsp: ENST00000461052.1:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.222C>T
  variant of: http://identifiers.org/hgnc/674
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40279
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11733
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His217Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

X-153186147-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186147
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186147
    reference: chr 0
allele count: 1
allele frequency: 1.193830285086672e-5
allele num: 83764
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1028C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+403C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.545C>T
  hgvsp: ENSP00000473936.1:p.Ala182Val
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.642C>T
  hgvsp: ENST00000404127.2:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.614C>T
  hgvsp: ENSP00000397533.1:p.Ala205Val
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.545C>T
  hgvsp: ENSP00000444169.1:p.Ala182Val
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+671C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.215C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.614C>T
  hgvsp: ENSP00000203786.7:p.Ala205Val
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.614C>T
  hgvsp: ENSP00000359045.3:p.Ala205Val
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.551C>T
  hgvsp: ENSP00000359033.1:p.Ala184Val
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+671C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.545C>T
  hgvsp: ENSP00000473840.1:p.Ala182Val
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.156C>T
  hgvsp: ENSP00000411712.1:p.Ala53Val
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala205Val
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

X-153186148-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186148
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186148
    reference: chr 0
allele count: 3
allele frequency: 3.580037709730542e-5
allele num: 83798
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.214G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1027G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.544G>A
  hgvsp: ENSP00000473840.1:p.Ala182Thr
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.544G>A
  hgvsp: ENSP00000444169.1:p.Ala182Thr
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.613G>A
  hgvsp: ENSP00000359045.3:p.Ala205Thr
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.544G>A
  hgvsp: ENSP00000473936.1:p.Ala182Thr
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.613G>A
  hgvsp: ENSP00000397533.1:p.Ala205Thr
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+402G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.550G>A
  hgvsp: ENSP00000359033.1:p.Ala184Thr
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+670G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.613G>A
  hgvsp: ENSP00000203786.7:p.Ala205Thr
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.155G>A
  hgvsp: ENSP00000411712.1:p.Ala53Thr
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.641G>A
  hgvsp: ENSP00000385042.2:p.Arg214His
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+670G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40283
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala205Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

X-153186149-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186149
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186149
    reference: chr 0
allele count: 8
allele frequency: 9.532093366854528e-5
allele num: 83927
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+401C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+669C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1026C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.543C>T
  hgvsp: ENST00000537206.1:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.612C>T
  hgvsp: ENST00000420383.1:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.640C>T
  hgvsp: ENSP00000385042.2:p.Arg214Cys
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+669C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.154C>T
  hgvsp: ENST00000418750.1:c.154C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.612C>T
  hgvsp: ENST00000370028.3:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.213C>T
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.612C>T
  hgvsp: ENST00000350060.5:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.549C>T
  hgvsp: ENST00000370016.1:c.549C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.543C>T
  hgvsp: ENST00000488269.1:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.543C>T
  hgvsp: ENST00000461052.1:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/674
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg214Cys
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP

X-153186157-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186157
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186157
    reference: chr 0
allele count: 2
allele frequency: 2.372732557449787e-5
allele num: 84291
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.541A>G
  hgvsp: ENSP00000359033.1:p.Thr181Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+661A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.146A>G
  hgvsp: ENSP00000411712.1:p.Thr50Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.604A>G
  hgvsp: ENSP00000203786.7:p.Thr202Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.535A>G
  hgvsp: ENSP00000473936.1:p.Thr179Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.632A>G
  hgvsp: ENSP00000385042.2:p.His211Arg
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.535A>G
  hgvsp: ENSP00000473840.1:p.Thr179Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.205A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.604A>G
  hgvsp: ENSP00000397533.1:p.Thr202Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.535A>G
  hgvsp: ENSP00000444169.1:p.Thr179Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+661A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+393A>G
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.604A>G
  hgvsp: ENSP00000359045.3:p.Thr202Ala
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1018A>G
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12324
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr202Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

X-153186165-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186165
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186165
    reference: chr 0
allele count: 1
allele frequency: 1.181711827753684e-5
allele num: 84623
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1010G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.596G>A
  hgvsp: ENSP00000359045.3:p.Ser199Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.527G>A
  hgvsp: ENSP00000473840.1:p.Ser176Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+385G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.624G>A
  hgvsp: ENST00000404127.2:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.138G>A
  hgvsp: ENSP00000411712.1:p.Ser47Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.527G>A
  hgvsp: ENSP00000444169.1:p.Ser176Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.596G>A
  hgvsp: ENSP00000203786.7:p.Ser199Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.527G>A
  hgvsp: ENSP00000473936.1:p.Ser176Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398259
  ensembl transcript: ENST00000442262
  gene symbol: ARHGAP4
  hgvsc: ENST00000442262.1:c.527G>A
  hgvsp: ENSP00000398259.1:p.Ser176Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+653G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.596G>A
  hgvsp: ENSP00000397533.1:p.Ser199Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.197G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.533G>A
  hgvsp: ENSP00000359033.1:p.Ser178Asn
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+653G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12611
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser199Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

X-153186168-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153186168
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153186168
    reference: chr 0
allele count: 1
allele frequency: 1.180553915897339e-5
allele num: 84706
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000377322
  ensembl transcript: ENST00000393721
  gene symbol: ARHGAP4
  hgvsc: ENST00000393721.1:c.498+382G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473936
  ensembl transcript: ENST00000488269
  gene symbol: ARHGAP4
  hgvsc: ENST00000488269.1:c.524G>A
  hgvsp: ENSP00000473936.1:p.Arg175Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000444169
  ensembl transcript: ENST00000537206
  gene symbol: ARHGAP4
  hgvsc: ENST00000537206.1:c.524G>A
  hgvsp: ENSP00000444169.1:p.Arg175Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000203786
  ensembl transcript: ENST00000350060
  gene symbol: ARHGAP4
  hgvsc: ENST00000350060.5:c.593G>A
  hgvsp: ENSP00000203786.7:p.Arg198Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000397533
  ensembl transcript: ENST00000420383
  gene symbol: ARHGAP4
  hgvsc: ENST00000420383.1:c.593G>A
  hgvsp: ENSP00000397533.1:p.Arg198Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000411712
  ensembl transcript: ENST00000418750
  gene symbol: ARHGAP4
  hgvsc: ENST00000418750.1:c.135G>A
  hgvsp: ENSP00000411712.1:p.Arg46Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000398259
  ensembl transcript: ENST00000442262
  gene symbol: ARHGAP4
  hgvsc: ENST00000442262.1:c.524G>A
  hgvsp: ENSP00000398259.1:p.Arg175Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359045
  ensembl transcript: ENST00000370028
  gene symbol: ARHGAP4
  hgvsc: ENST00000370028.3:c.593G>A
  hgvsp: ENSP00000359045.3:p.Arg198Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000359033
  ensembl transcript: ENST00000370016
  gene symbol: ARHGAP4
  hgvsc: ENST00000370016.1:c.530G>A
  hgvsp: ENSP00000359033.1:p.Arg177Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000473840
  ensembl transcript: ENST00000461052
  gene symbol: ARHGAP4
  hgvsc: ENST00000461052.1:c.524G>A
  hgvsp: ENSP00000473840.1:p.Arg175Gln
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089820
  ensembl protein: ENSP00000385042
  ensembl transcript: ENST00000404127
  gene symbol: ARHGAP4
  hgvsc: ENST00000404127.2:c.621G>A
  hgvsp: ENST00000404127.2:c.621G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000460782
  gene symbol: ARHGAP4
  hgvsc: ENST00000460782.1:n.194G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000470209
  gene symbol: ARHGAP4
  hgvsc: ENST00000470209.1:n.477+650G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494813
  gene symbol: ARHGAP4
  hgvsc: ENST00000494813.1:n.1007G>A
  variant of: http://identifiers.org/hgnc/674
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089820
  ensembl transcript: ENST00000494302
  gene symbol: ARHGAP4
  hgvsc: ENST00000494302.1:n.477+650G>A
  variant of: http://identifiers.org/hgnc/674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg198Gln
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2345
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3327
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2208
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1917
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2474
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8918
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3035
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3543
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3051
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5131
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3080
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2001
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28378
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13004
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2462
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47993
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.174398120963006e-4
allele num: 8515
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.506e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.352e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.13e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.901788e6

GenotypeDepth
all individuals: 3864
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7495
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3035
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1338
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3327
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1087
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6146
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2345
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3044
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5129
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2000
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12962
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28379
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3080
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3549
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.083637197091242e-5
allele num: 47993
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

BaseQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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FS
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DP
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

African
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East Asian
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allele frequency: 1.506477854775535e-3
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num of homozygotes: 0

Latino
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South Asian
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Other
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European (Finnish)
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ReadPosRankSum
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QD
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MQRankSum
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MQ
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BaseQRankSum
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VQSLOD
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FS
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ClippingRankSum
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 4.167448063178513e-5
allele num: 47991
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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QD
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MQRankSum
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 47990
num of homozygotes: 0

East Asian
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num of homozygotes: 0

Latino
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BaseQRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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FS
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DP
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

South Asian
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European (Non-Finnish)
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Other
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Latino
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African
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European (Finnish)
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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QD
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FS
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MQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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East Asian
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Latino
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African
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BaseQRankSum
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QD
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DP
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ClippingRankSum
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FS
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ReadPosRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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European (Non-Finnish)
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South Asian
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East Asian
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Other
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Latino
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VQSLOD
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DP
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FS
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MQRankSum
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MQ
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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Other
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South Asian
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DP
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MQ
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InbreedingCoeff
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ClippingRankSum
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FS
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BaseQRankSum
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MQRankSum
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QD
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ReadPosRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

African
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num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Finnish)
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South Asian
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Other
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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VQSLOD
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FS
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 8513
num of homozygotes: 0

South Asian
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Other
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Latino
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European (Finnish)
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European (Non-Finnish)
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East Asian
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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DP
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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Other
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East Asian
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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DP
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MQ
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InbreedingCoeff
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FS
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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South Asian
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ReadPosRankSum
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VQSLOD
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DP
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QD
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MQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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MQ
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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Other
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African
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ReadPosRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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FS
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MQ
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ClippingRankSum
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VQSLOD
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QD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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Other
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European (Non-Finnish)
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South Asian
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VQSLOD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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QD
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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East Asian
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European (Non-Finnish)
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African
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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South Asian
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European (Finnish)
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Latino
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VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
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DP
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MQ
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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East Asian
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Other
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African
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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South Asian
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East Asian
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African
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European (Non-Finnish)
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VQSLOD
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FS
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ReadPosRankSum
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BaseQRankSum
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DP
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MQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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MQ
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QD
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InbreedingCoeff
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FS
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DP
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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East Asian
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South Asian
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African
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FS
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DP
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MQ
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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SIO_000300: 2.01e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5456
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 77
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.199628022318661e-4
allele num: 1613
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.093e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.41e-2

DP
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SIO_000300: 2.10781e5

ClippingRankSum
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SIO_000300: 2.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.899e0

MQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

QD
type: SiteQuality
SIO_000300: 1.692e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.36e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 79
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1671
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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SIO_000300: 1.227e1

VQSLOD
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SIO_000300: 3.41e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.12602e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.270000000000001e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1688
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 293
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1883
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.807337791433219e-4
allele num: 5533
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.11457e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-2

QD
type: SiteQuality
SIO_000300: 2.796e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.62e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 4.008016032064128e-4
allele num: 2495
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 485
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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DP
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SIO_000300: 2.16581e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
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FS
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 99
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1700
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 3.491620111731844e-4
allele num: 2864
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5779
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 109
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

VQSLOD
type: SiteQuality
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FS
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InbreedingCoeff
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MQ
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QD
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DP
type: SiteQuality
SIO_000300: 2.21629e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.641227638273428e-4
allele num: 6093
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 50
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African
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allele frequency: 0.0e0
allele num: 1712
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 295
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DP
type: SiteQuality
SIO_000300: 2.40709e5

FS
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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QD
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MQRankSum
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MQ
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SIO_000300: 5.941e1

ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 289
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6105
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 486
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African
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
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allele num: 4022
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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QD
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SIO_000300: 2.682e1

InbreedingCoeff
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VQSLOD
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SIO_000300: -3.806e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.42037e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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bin: 6.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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bin: 8.25e1
variant carriers: 0

GenotypeDepth
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5581
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 131
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6082
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1705
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.485707183693761e-4
allele num: 4023
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.592e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.74e-2

QD
type: SiteQuality
SIO_000300: 2.463e1

DP
type: SiteQuality
SIO_000300: 2.40847e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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bin: 6.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 756
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3992
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 289
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.655355073663301e-4
allele num: 6041
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.81e-2

BaseQRankSum
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SIO_000300: -3.015e0

ClippingRankSum
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SIO_000300: -2.85e-1

ReadPosRankSum
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SIO_000300: 1.09e0

MQRankSum
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SIO_000300: -1.713e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.886e1

VQSLOD
type: SiteQuality
SIO_000300: -2.4e0

DP
type: SiteQuality
SIO_000300: 2.38343e5

QD
type: SiteQuality
SIO_000300: 1.043e1

GenotypeDepth
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bin: 6.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 93
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variant carriers: 0

GenotypeQuality
all individuals: 536
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 5.91715976331361e-4
allele num: 1690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5986
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 129
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3961
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 287
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQRankSum
type: SiteQuality
SIO_000300: -1.592e0

BaseQRankSum
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SIO_000300: -2.527e0

MQ
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SIO_000300: 5.911e1

VQSLOD
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SIO_000300: -1.653e0

FS
type: SiteQuality
SIO_000300: 2.756e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.73e-2

QD
type: SiteQuality
SIO_000300: 1.339e1

DP
type: SiteQuality
SIO_000300: 2.34946e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 117
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 473
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1631
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3601
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.83e-2

DP
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SIO_000300: 2.13363e5

FS
type: SiteQuality
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ClippingRankSum
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SIO_000300: 2.12e-1

QD
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VQSLOD
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SIO_000300: 1.56e0

BaseQRankSum
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SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.18e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1631
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 8.331019161344071e-4
allele num: 3601
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5728
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 50
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VQSLOD
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ClippingRankSum
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DP
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QD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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SIO_000300: 1.763e0

MQ
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5728
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 278
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African
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allele frequency: 0.0e0
allele num: 1631
num of homozygotes: 0

Other
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East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 2
allele frequency: 5.554012774229381e-4
allele num: 3601
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
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DP
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QD
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FS
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 111
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
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South Asian
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MQ
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FS
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InbreedingCoeff
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VQSLOD
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Finnish)
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African
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MQ
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MQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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South Asian
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African
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Other
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European (Non-Finnish)
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FS
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MQRankSum
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VQSLOD
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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African
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European (Finnish)
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Latino
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East Asian
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FS
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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MQ
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MQRankSum
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ReadPosRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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East Asian
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DP
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VQSLOD
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MQ
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FS
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European (Non-Finnish)
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African
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MQ
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MQRankSum
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DP
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VQSLOD
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6159
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27786
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4293
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2079
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 313
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3482
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.203e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
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SIO_000300: 7.04193e5

InbreedingCoeff
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SIO_000300: -1.36e-2

MQ
type: SiteQuality
SIO_000300: 5.811e1

VQSLOD
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ClippingRankSum
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SIO_000300: -5.73e-1

BaseQRankSum
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SIO_000300: -2.054e0

QD
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SIO_000300: 1.199e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.48e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 45

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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variant carriers: 15

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 12

GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 14

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

Latino
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allele count: 8
allele frequency: 1.271253774034642e-3
allele num: 6293
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4420
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 8.307947936859596e-4
allele num: 3611
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 1.39017608897127e-3
allele num: 2158
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 6.961364427427776e-4
allele num: 5746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 181
allele frequency: 6.309258226436141e-3
allele num: 28688
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 322
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.710000000000001e-2

BaseQRankSum
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SIO_000300: -1.239e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
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SIO_000300: 1.815e1

VQSLOD
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SIO_000300: 3.9e0

ClippingRankSum
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SIO_000300: 2.6e-2

MQRankSum
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SIO_000300: 1.58e-1

FS
type: SiteQuality
SIO_000300: 9.379999999999999e-1

ReadPosRankSum
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SIO_000300: 4.23e-1

DP
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SIO_000300: 7.59829e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4563
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 329
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6531
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2229
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.698081168279844e-4
allele num: 5889
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29505
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.01788e5

VQSLOD
type: SiteQuality
SIO_000300: -2.724e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.047e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.628811777076761e-4
allele num: 3804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2261
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 5.005005005005005e-4
allele num: 5994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4623
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.002171371304493e-4
allele num: 29935
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6639
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

QD
type: SiteQuality
SIO_000300: 1.679e1

DP
type: SiteQuality
SIO_000300: 8.20562e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

BaseQRankSum
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SIO_000300: 2.37e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.04e0

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6711
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 30199
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
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SIO_000300: 1.67e0

ClippingRankSum
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BaseQRankSum
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QD
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FS
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 6.015399422521656e-5
allele num: 33248
num of homozygotes: 0

Latino
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allele frequency: 2.739350773866594e-4
allele num: 7301
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Other
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MQRankSum
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DP
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QD
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FS
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InbreedingCoeff
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MQ
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2595
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 373
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.984272881912322e-5
allele num: 33509
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4319
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7355
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.8e-3

ReadPosRankSum
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SIO_000300: 1.56e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -2.024e0

VQSLOD
type: SiteQuality
SIO_000300: 2.41e-1

DP
type: SiteQuality
SIO_000300: 9.35661e5

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6609
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 389
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2667
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.923720141508055e-5
allele num: 34203
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4445
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5223
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.875e1

QD
type: SiteQuality
SIO_000300: 2.529e1

InbreedingCoeff
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SIO_000300: -5.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.4e-1

DP
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SIO_000300: 9.57757e5

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2983
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.671011512059617e-5
allele num: 37439
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6967
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8054
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5142
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.945e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.051722e6

QD
type: SiteQuality
SIO_000300: 1.075e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.484e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.47e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.662e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.137e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5807
num of homozygotes: 0

African
type: Population
allele count: 23
allele frequency: 3.218583823117828e-3
allele num: 7146
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.629764065335753e-4
allele num: 8265
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.573538873304681e-5
allele num: 38857
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5467
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.093998e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: 6.840000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.36e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

QD
type: SiteQuality
SIO_000300: 1.445e1

BaseQRankSum
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SIO_000300: -2.369e0

VQSLOD
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SIO_000300: 5.0e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5573
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.393339835585899e-4
allele num: 7177
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3154
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 39101
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

MQRankSum
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SIO_000300: -1.82e-1

InbreedingCoeff
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BaseQRankSum
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DP
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ClippingRankSum
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QD
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MQ
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SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.0999e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

VQSLOD
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SIO_000300: -1.943e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6166
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.781943381790359e-5
allele num: 41824
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 494
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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FS
type: SiteQuality
SIO_000300: 5.519e0

ClippingRankSum
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InbreedingCoeff
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DP
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QD
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MQ
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6645
num of homozygotes: 0

Latino
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European (Finnish)
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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East Asian
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DP
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VQSLOD
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MQ
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ClippingRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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FS
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

Latino
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allele num: 8851
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East Asian
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Other
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African
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ReadPosRankSum
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FS
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VQSLOD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 3.95882818685669e-4
allele num: 7578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: 1.98e-1

FS
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQ
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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Other
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South Asian
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Latino
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African
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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ClippingRankSum
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FS
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QD
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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South Asian
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European (Non-Finnish)
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African
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Latino
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Other
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DP
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MQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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QD
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VQSLOD
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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East Asian
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South Asian
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African
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Latino
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ReadPosRankSum
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MQ
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InbreedingCoeff
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QD
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FS
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MQRankSum
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ClippingRankSum
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Other
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European (Finnish)
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African
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South Asian
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Latino
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ClippingRankSum
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FS
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VQSLOD
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MQRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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SIO_000300: 6.0e1

DP
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SIO_000300: 1.350239e6

QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.18316777644362e-5
allele num: 45805
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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InbreedingCoeff
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DP
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MQRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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ClippingRankSum
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MQ
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SIO_000300: 5.969e1

QD
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4252
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9358
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 6.547359231776516e-5
allele num: 45820
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
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SIO_000300: 1.08e-1

FS
type: SiteQuality
SIO_000300: 2.284e0

VQSLOD
type: SiteQuality
SIO_000300: -4.061e-1

QD
type: SiteQuality
SIO_000300: 1.97e1

MQ
type: SiteQuality
SIO_000300: 5.942e1

BaseQRankSum
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SIO_000300: 1.63e0

MQRankSum
type: SiteQuality
SIO_000300: 9.75e-1

InbreedingCoeff
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SIO_000300: 1.3e-2

ClippingRankSum
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SIO_000300: 1.32e0

DP
type: SiteQuality
SIO_000300: 1.360597e6

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 9200
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 6
allele frequency: 7.44047619047619e-4
allele num: 8064
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 4.360718646432932e-5
allele num: 45864
num of homozygotes: 0

East Asian
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allele count: 0
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Other
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.18e-2

VQSLOD
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ClippingRankSum
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FS
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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MQ
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.363049e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
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allele num: 45967
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African
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Latino
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European (Finnish)
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East Asian
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Other
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QD
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DP
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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MQ
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MQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
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allele num: 46070
num of homozygotes: 0

African
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Latino
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Other
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European (Finnish)
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South Asian
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East Asian
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DP
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ClippingRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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MQ
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