19-17886823-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886823
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886823
    reference: chr 19
allele count: 6
allele frequency: 5.023695095199022e-5
allele num: 119434
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1035C>T
  hgvsp: ENST00000252771.7:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1035C>T
  hgvsp: ENST00000600676.1:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1035C>T
  hgvsp: ENST00000594202.1:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000596522
  gene symbol: FCHO1
  hgvsc: ENST00000596522.1:n.504C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.885C>T
  hgvsp: ENST00000595033.1:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1035C>T
  hgvsp: ENST00000539407.1:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1056C>T
  hgvsp: ENST00000597512.1:c.1056C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1035C>T
  hgvsp: ENST00000389133.4:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1035C>T
  hgvsp: ENST00000596951.1:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1035C>T
  hgvsp: ENST00000596536.1:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5079
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser345Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

19-17886830-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886830
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886830
    reference: chr 19
allele count: 1
allele frequency: 8.368901163277262e-6
allele num: 119490
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1042G>A
  hgvsp: ENSP00000373785.4:p.Asp348Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1042G>A
  hgvsp: ENSP00000472417.1:p.Asp348Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.892G>A
  hgvsp: ENSP00000472668.1:p.Asp298Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1042G>A
  hgvsp: ENSP00000470493.1:p.Asp348Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1042G>A
  hgvsp: ENSP00000473001.1:p.Asp348Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1063G>A
  hgvsp: ENSP00000470568.1:p.Asp355Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1042G>A
  hgvsp: ENSP00000252771.7:p.Asp348Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1042G>A
  hgvsp: ENSP00000470731.1:p.Asp348Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000596522
  gene symbol: FCHO1
  hgvsc: ENST00000596522.1:n.511G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1042G>A
  hgvsp: ENSP00000437978.1:p.Asp348Asn
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5081
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp348Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

19-17886833-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886833
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886833
    reference: chr 19
allele count: 1
allele frequency: 8.36456102783726e-6
allele num: 119552
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1045T>C
  hgvsp: ENSP00000252771.7:p.Phe349Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1045T>C
  hgvsp: ENSP00000470493.1:p.Phe349Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1045T>C
  hgvsp: ENSP00000472417.1:p.Phe349Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1045T>C
  hgvsp: ENSP00000373785.4:p.Phe349Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1066T>C
  hgvsp: ENSP00000470568.1:p.Phe356Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1045T>C
  hgvsp: ENSP00000437978.1:p.Phe349Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000596522
  gene symbol: FCHO1
  hgvsc: ENST00000596522.1:n.514T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1045T>C
  hgvsp: ENSP00000470731.1:p.Phe349Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.895T>C
  hgvsp: ENSP00000472668.1:p.Phe299Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1045T>C
  hgvsp: ENSP00000473001.1:p.Phe349Leu
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5080
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2500
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Phe349Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

19-17886835-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886835
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886835
    reference: chr 19
allele count: 18
allele frequency: 1.50546987387508e-4
allele num: 119564
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1047C>T
  hgvsp: ENST00000252771.7:c.1047C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1047C>T
  hgvsp: ENST00000389133.4:c.1047C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1047C>T
  hgvsp: ENST00000594202.1:c.1047C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.897C>T
  hgvsp: ENST00000595033.1:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1047C>T
  hgvsp: ENST00000539407.1:c.1047C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1047C>T
  hgvsp: ENST00000596536.1:c.1047C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000596522
  gene symbol: FCHO1
  hgvsc: ENST00000596522.1:n.516C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1047C>T
  hgvsp: ENST00000596951.1:c.1047C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1047C>T
  hgvsp: ENST00000600676.1:c.1047C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1068C>T
  hgvsp: ENST00000597512.1:c.1068C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9261
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7030
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5080
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe349Phe
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

19-17886839-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886839
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886839
    reference: chr 19
allele count: 2
allele frequency: 1.672772285508774e-5
allele num: 119562
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1051G>A
  hgvsp: ENSP00000470731.1:p.Asp351Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1051G>A
  hgvsp: ENSP00000470493.1:p.Asp351Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.901G>A
  hgvsp: ENSP00000472668.1:p.Asp301Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1051G>A
  hgvsp: ENSP00000373785.4:p.Asp351Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1051G>A
  hgvsp: ENSP00000437978.1:p.Asp351Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1051G>A
  hgvsp: ENSP00000473001.1:p.Asp351Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1072G>A
  hgvsp: ENSP00000470568.1:p.Asp358Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000596522
  gene symbol: FCHO1
  hgvsc: ENST00000596522.1:n.520G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1051G>A
  hgvsp: ENSP00000472417.1:p.Asp351Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1051G>A
  hgvsp: ENSP00000252771.7:p.Asp351Asn
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8491
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5082
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp351Asn
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-17886851-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886851
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886851
    reference: chr 19
allele count: 6
allele frequency: 5.017393631255017e-5
allele num: 119584
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.913C>T
  hgvsp: ENSP00000472668.1:p.Arg305Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1063C>T
  hgvsp: ENSP00000470731.1:p.Arg355Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1063C>T
  hgvsp: ENSP00000473001.1:p.Arg355Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000596522
  gene symbol: FCHO1
  hgvsc: ENST00000596522.1:n.532C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1063C>T
  hgvsp: ENSP00000472417.1:p.Arg355Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1063C>T
  hgvsp: ENSP00000437978.1:p.Arg355Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1063C>T
  hgvsp: ENSP00000373785.4:p.Arg355Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1084C>T
  hgvsp: ENSP00000470568.1:p.Arg362Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1063C>T
  hgvsp: ENSP00000470493.1:p.Arg355Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1063C>T
  hgvsp: ENSP00000252771.7:p.Arg355Cys
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10167
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg355Cys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

19-17886852-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886852
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886852
    reference: chr 19
allele count: 90
allele frequency: 7.526719855486979e-4
allele num: 119574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1064G>A
  hgvsp: ENSP00000470493.1:p.Arg355His
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.914G>A
  hgvsp: ENSP00000472668.1:p.Arg305His
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1064G>A
  hgvsp: ENSP00000470731.1:p.Arg355His
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1064G>A
  hgvsp: ENSP00000373785.4:p.Arg355His
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1085G>A
  hgvsp: ENSP00000470568.1:p.Arg362His
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1064G>A
  hgvsp: ENSP00000252771.7:p.Arg355His
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1064G>A
  hgvsp: ENSP00000473001.1:p.Arg355His
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000596522
  gene symbol: FCHO1
  hgvsc: ENST00000596522.1:n.533G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1064G>A
  hgvsp: ENSP00000472417.1:p.Arg355His
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1064G>A
  hgvsp: ENSP00000437978.1:p.Arg355His
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8484
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9939
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3091
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg355His
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

19-17886861-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886861
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886861
    reference: chr 19
allele count: 2
allele frequency: 1.67266036631262e-5
allele num: 119570
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1073A>G
  hgvsp: ENSP00000473001.1:p.Tyr358Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1073A>G
  hgvsp: ENSP00000470493.1:p.Tyr358Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1094A>G
  hgvsp: ENSP00000470568.1:p.Tyr365Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1073A>G
  hgvsp: ENSP00000437978.1:p.Tyr358Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1073A>G
  hgvsp: ENSP00000373785.4:p.Tyr358Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.923A>G
  hgvsp: ENSP00000472668.1:p.Tyr308Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1073A>G
  hgvsp: ENSP00000252771.7:p.Tyr358Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1073A>G
  hgvsp: ENSP00000472417.1:p.Tyr358Cys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1073A>G
  hgvsp: ENSP00000470731.1:p.Tyr358Cys
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25633
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4983
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr358Cys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

19-17886862-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886862
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886862
    reference: chr 19
allele count: 5
allele frequency: 4.181580972133944e-5
allele num: 119572
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1095T>C
  hgvsp: ENST00000597512.1:c.1095T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1074T>C
  hgvsp: ENST00000600676.1:c.1074T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1074T>C
  hgvsp: ENST00000539407.1:c.1074T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1074T>C
  hgvsp: ENST00000389133.4:c.1074T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1074T>C
  hgvsp: ENST00000596951.1:c.1074T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.924T>C
  hgvsp: ENST00000595033.1:c.924T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1074T>C
  hgvsp: ENST00000596536.1:c.1074T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1074T>C
  hgvsp: ENST00000252771.7:c.1074T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1074T>C
  hgvsp: ENST00000594202.1:c.1074T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9034
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2502
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Tyr358Tyr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/19-17886866-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886866
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886866
    reference: chr 19
allele count: 3
allele frequency: 2.509914160935696e-5
allele num: 119526
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.928C>A
  hgvsp: ENSP00000472668.1:p.His310Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1078C>A
  hgvsp: ENSP00000437978.1:p.His360Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1078C>A
  hgvsp: ENSP00000470493.1:p.His360Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1078C>A
  hgvsp: ENSP00000252771.7:p.His360Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1078C>A
  hgvsp: ENSP00000472417.1:p.His360Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1078C>A
  hgvsp: ENSP00000473001.1:p.His360Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1078C>A
  hgvsp: ENSP00000470731.1:p.His360Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1078C>A
  hgvsp: ENSP00000373785.4:p.His360Asn
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1099C>A
  hgvsp: ENSP00000470568.1:p.His367Asn
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
hgvs: p.His360Asn
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

19-17886875-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886875
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886875
    reference: chr 19
allele count: 2
allele frequency: 1.674901599531028e-5
allele num: 119410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1087C>G
  hgvsp: ENSP00000437978.1:p.Pro363Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1087C>G
  hgvsp: ENSP00000470731.1:p.Pro363Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1087C>G
  hgvsp: ENSP00000472417.1:p.Pro363Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1087C>G
  hgvsp: ENSP00000470493.1:p.Pro363Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.937C>G
  hgvsp: ENSP00000472668.1:p.Pro313Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1108C>G
  hgvsp: ENSP00000470568.1:p.Pro370Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1087C>G
  hgvsp: ENSP00000373785.4:p.Pro363Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1087C>G
  hgvsp: ENSP00000252771.7:p.Pro363Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1087C>G
  hgvsp: ENSP00000473001.1:p.Pro363Ala
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5080
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8521
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10185
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro363Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

19-17886878-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886878
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886878
    reference: chr 19
allele count: 1
allele frequency: 8.379279717115517e-6
allele num: 119342
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1090G>A
  hgvsp: ENSP00000473001.1:p.Ala364Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1090G>A
  hgvsp: ENSP00000437978.1:p.Ala364Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.940G>A
  hgvsp: ENSP00000472668.1:p.Ala314Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1111G>A
  hgvsp: ENSP00000470568.1:p.Ala371Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1090G>A
  hgvsp: ENSP00000472417.1:p.Ala364Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1090G>A
  hgvsp: ENSP00000373785.4:p.Ala364Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1090G>A
  hgvsp: ENSP00000470493.1:p.Ala364Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1090G>A
  hgvsp: ENSP00000470731.1:p.Ala364Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1090G>A
  hgvsp: ENSP00000252771.7:p.Ala364Thr
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9886
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2499
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala364Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

19-17886878-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886878
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886878
    reference: chr 19
allele count: 1
allele frequency: 8.379279717115517e-6
allele num: 119342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1090G>C
  hgvsp: ENSP00000373785.4:p.Ala364Pro
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1090G>C
  hgvsp: ENSP00000473001.1:p.Ala364Pro
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.940G>C
  hgvsp: ENSP00000472668.1:p.Ala314Pro
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1090G>C
  hgvsp: ENSP00000252771.7:p.Ala364Pro
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1090G>C
  hgvsp: ENSP00000472417.1:p.Ala364Pro
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1090G>C
  hgvsp: ENSP00000437978.1:p.Ala364Pro
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1090G>C
  hgvsp: ENSP00000470493.1:p.Ala364Pro
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1111G>C
  hgvsp: ENSP00000470568.1:p.Ala371Pro
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1090G>C
  hgvsp: ENSP00000470731.1:p.Ala364Pro
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9915
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9886
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7024
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3081
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala364Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

19-17886880-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886880
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886880
    reference: chr 19
allele count: 2
allele frequency: 1.675743611227482e-5
allele num: 119350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1092C>T
  hgvsp: ENST00000252771.7:c.1092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1092C>T
  hgvsp: ENST00000539407.1:c.1092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.942C>T
  hgvsp: ENST00000595033.1:c.942C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1092C>T
  hgvsp: ENST00000596951.1:c.1092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1113C>T
  hgvsp: ENST00000597512.1:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1092C>T
  hgvsp: ENST00000600676.1:c.1092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1092C>T
  hgvsp: ENST00000389133.4:c.1092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1092C>T
  hgvsp: ENST00000594202.1:c.1092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1092C>T
  hgvsp: ENST00000596536.1:c.1092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9941
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9884
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3088
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4895
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala364Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

19-17886882-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886882
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886882
    reference: chr 19
allele count: 1
allele frequency: 8.379701012267883e-6
allele num: 119336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1094C>T
  hgvsp: ENSP00000437978.1:p.Pro365Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1094C>T
  hgvsp: ENSP00000470493.1:p.Pro365Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1094C>T
  hgvsp: ENSP00000252771.7:p.Pro365Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1094C>T
  hgvsp: ENSP00000373785.4:p.Pro365Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.944C>T
  hgvsp: ENSP00000472668.1:p.Pro315Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1094C>T
  hgvsp: ENSP00000473001.1:p.Pro365Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1094C>T
  hgvsp: ENSP00000472417.1:p.Pro365Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1115C>T
  hgvsp: ENSP00000470568.1:p.Pro372Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1094C>T
  hgvsp: ENSP00000470731.1:p.Pro365Leu
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3089
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10106
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro365Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS

19-17886887-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886887
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886887
    reference: chr 19
allele count: 4
allele frequency: 3.352723249459373e-5
allele num: 119306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1120C>T
  hgvsp: ENSP00000470568.1:p.Arg374Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.949C>T
  hgvsp: ENSP00000472668.1:p.Arg317Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1099C>T
  hgvsp: ENSP00000373785.4:p.Arg367Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1099C>T
  hgvsp: ENSP00000252771.7:p.Arg367Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1099C>T
  hgvsp: ENSP00000473001.1:p.Arg367Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1099C>T
  hgvsp: ENSP00000470493.1:p.Arg367Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1099C>T
  hgvsp: ENSP00000472417.1:p.Arg367Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1099C>T
  hgvsp: ENSP00000437978.1:p.Arg367Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1099C>T
  hgvsp: ENSP00000470731.1:p.Arg367Trp
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7011
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4289
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25644
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Arg367Trp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

19-17886888-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886888
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886888
    reference: chr 19
allele count: 1
allele frequency: 8.379420144126027e-6
allele num: 119340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1100G>T
  hgvsp: ENSP00000437978.1:p.Arg367Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.950G>T
  hgvsp: ENSP00000472668.1:p.Arg317Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1100G>T
  hgvsp: ENSP00000470493.1:p.Arg367Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1100G>T
  hgvsp: ENSP00000470731.1:p.Arg367Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1121G>T
  hgvsp: ENSP00000470568.1:p.Arg374Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1100G>T
  hgvsp: ENSP00000252771.7:p.Arg367Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1100G>T
  hgvsp: ENSP00000472417.1:p.Arg367Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1100G>T
  hgvsp: ENSP00000473001.1:p.Arg367Leu
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1100G>T
  hgvsp: ENSP00000373785.4:p.Arg367Leu
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8467
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25645
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg367Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

19-17886893-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886893
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886893
    reference: chr 19
allele count: 2
allele frequency: 1.675013818864006e-5
allele num: 119402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1105C>G
  hgvsp: ENSP00000470493.1:p.Pro369Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.955C>G
  hgvsp: ENSP00000472668.1:p.Pro319Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1105C>G
  hgvsp: ENSP00000252771.7:p.Pro369Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1105C>G
  hgvsp: ENSP00000373785.4:p.Pro369Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1105C>G
  hgvsp: ENSP00000473001.1:p.Pro369Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1105C>G
  hgvsp: ENSP00000472417.1:p.Pro369Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1105C>G
  hgvsp: ENSP00000470731.1:p.Pro369Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1105C>G
  hgvsp: ENSP00000437978.1:p.Pro369Ala
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1126C>G
  hgvsp: ENSP00000470568.1:p.Pro376Ala
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro369Ala
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-17886895-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886895
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886895
    reference: chr 19
allele count: 27
allele frequency: 2.260473527343357e-4
allele num: 119444
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1107A>G
  hgvsp: ENST00000596951.1:c.1107A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1107A>G
  hgvsp: ENST00000389133.4:c.1107A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1107A>G
  hgvsp: ENST00000600676.1:c.1107A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1107A>G
  hgvsp: ENST00000594202.1:c.1107A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1107A>G
  hgvsp: ENST00000252771.7:c.1107A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1128A>G
  hgvsp: ENST00000597512.1:c.1128A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.957A>G
  hgvsp: ENST00000595033.1:c.957A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1107A>G
  hgvsp: ENST00000539407.1:c.1107A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1107A>G
  hgvsp: ENST00000596536.1:c.1107A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 10046
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8869
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10319
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro369Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

19-17886901-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886901
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886901
    reference: chr 19
allele count: 1
allele frequency: 8.368200836820084e-6
allele num: 119500
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1113C>T
  hgvsp: ENST00000596536.1:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1113C>T
  hgvsp: ENST00000539407.1:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1134C>T
  hgvsp: ENST00000597512.1:c.1134C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.963C>T
  hgvsp: ENST00000595033.1:c.963C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1113C>T
  hgvsp: ENST00000252771.7:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1113C>T
  hgvsp: ENST00000594202.1:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1113C>T
  hgvsp: ENST00000600676.1:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1113C>T
  hgvsp: ENST00000596951.1:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1113C>T
  hgvsp: ENST00000389133.4:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7018
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4991
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4077
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25674
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Cys371Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-17886905-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886905
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886905
    reference: chr 19
allele count: 1
allele frequency: 8.362882183715796e-6
allele num: 119576
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1138C>A
  hgvsp: ENSP00000470568.1:p.Pro380Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.967C>A
  hgvsp: ENSP00000472668.1:p.Pro323Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1117C>A
  hgvsp: ENSP00000437978.1:p.Pro373Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1117C>A
  hgvsp: ENSP00000473001.1:p.Pro373Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1117C>A
  hgvsp: ENSP00000252771.7:p.Pro373Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1117C>A
  hgvsp: ENSP00000472417.1:p.Pro373Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1117C>A
  hgvsp: ENSP00000470731.1:p.Pro373Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1117C>A
  hgvsp: ENSP00000470493.1:p.Pro373Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1117C>A
  hgvsp: ENSP00000373785.4:p.Pro373Thr
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25676
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10469
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro373Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-17886905-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886905
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886905
    reference: chr 19
allele count: 1
allele frequency: 8.362882183715796e-6
allele num: 119576
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1117C>T
  hgvsp: ENSP00000252771.7:p.Pro373Ser
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1138C>T
  hgvsp: ENSP00000470568.1:p.Pro380Ser
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1117C>T
  hgvsp: ENSP00000470493.1:p.Pro373Ser
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1117C>T
  hgvsp: ENSP00000470731.1:p.Pro373Ser
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1117C>T
  hgvsp: ENSP00000473001.1:p.Pro373Ser
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1117C>T
  hgvsp: ENSP00000373785.4:p.Pro373Ser
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1117C>T
  hgvsp: ENSP00000472417.1:p.Pro373Ser
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1117C>T
  hgvsp: ENSP00000437978.1:p.Pro373Ser
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.967C>T
  hgvsp: ENSP00000472668.1:p.Pro323Ser
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10130
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2503
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro373Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

19-17886907-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886907
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886907
    reference: chr 19
allele count: 4
allele frequency: 3.343922420999833e-5
allele num: 119620
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1119C>T
  hgvsp: ENST00000594202.1:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1140C>T
  hgvsp: ENST00000597512.1:c.1140C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1119C>T
  hgvsp: ENST00000539407.1:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1119C>T
  hgvsp: ENST00000600676.1:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1119C>T
  hgvsp: ENST00000252771.7:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1119C>T
  hgvsp: ENST00000596951.1:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1119C>T
  hgvsp: ENST00000596536.1:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1119C>T
  hgvsp: ENST00000389133.4:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.969C>T
  hgvsp: ENST00000595033.1:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8479
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3427
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro373Pro
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP

19-17886908-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886908
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886908
    reference: chr 19
allele count: 12
allele frequency: 1.00250626566416e-4
allele num: 119700
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.970G>A
  hgvsp: ENSP00000472668.1:p.Glu324Lys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1120G>A
  hgvsp: ENSP00000473001.1:p.Glu374Lys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1120G>A
  hgvsp: ENSP00000470493.1:p.Glu374Lys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1120G>A
  hgvsp: ENSP00000437978.1:p.Glu374Lys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1141G>A
  hgvsp: ENSP00000470568.1:p.Glu381Lys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1120G>A
  hgvsp: ENSP00000472417.1:p.Glu374Lys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1120G>A
  hgvsp: ENSP00000252771.7:p.Glu374Lys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1120G>A
  hgvsp: ENSP00000470731.1:p.Glu374Lys
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1120G>A
  hgvsp: ENSP00000373785.4:p.Glu374Lys
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7018
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9918
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5073
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5043
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu374Lys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum

19-17886909-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886909
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886909
    reference: chr 19
allele count: 1
allele frequency: 8.351428094204109e-6
allele num: 119740
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1121A>G
  hgvsp: ENSP00000472417.1:p.Glu374Gly
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1142A>G
  hgvsp: ENSP00000470568.1:p.Glu381Gly
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1121A>G
  hgvsp: ENSP00000437978.1:p.Glu374Gly
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.971A>G
  hgvsp: ENSP00000472668.1:p.Glu324Gly
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1121A>G
  hgvsp: ENSP00000473001.1:p.Glu374Gly
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1121A>G
  hgvsp: ENSP00000470731.1:p.Glu374Gly
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1121A>G
  hgvsp: ENSP00000373785.4:p.Glu374Gly
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1121A>G
  hgvsp: ENSP00000470493.1:p.Glu374Gly
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1121A>G
  hgvsp: ENSP00000252771.7:p.Glu374Gly
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5073
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9920
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25687
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4083
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu374Gly
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ

19-17886917-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886917
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886917
    reference: chr 19
allele count: 22
allele frequency: 1.832691891171423e-4
allele num: 120042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1129G>A
  hgvsp: ENSP00000470731.1:p.Ala377Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1129G>A
  hgvsp: ENSP00000472417.1:p.Ala377Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1129G>A
  hgvsp: ENSP00000470493.1:p.Ala377Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1129G>A
  hgvsp: ENSP00000473001.1:p.Ala377Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1129G>A
  hgvsp: ENSP00000437978.1:p.Ala377Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1129G>A
  hgvsp: ENSP00000373785.4:p.Ala377Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.979G>A
  hgvsp: ENSP00000472668.1:p.Ala327Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1129G>A
  hgvsp: ENSP00000252771.7:p.Ala377Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1150G>A
  hgvsp: ENSP00000470568.1:p.Ala384Thr
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9192
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5092
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10834
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala377Thr
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD

19-17886918-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886918
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886918
    reference: chr 19
allele count: 1
allele frequency: 8.329585020074299e-6
allele num: 120054
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1130C>T
  hgvsp: ENSP00000470493.1:p.Ala377Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1130C>T
  hgvsp: ENSP00000472417.1:p.Ala377Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1130C>T
  hgvsp: ENSP00000373785.4:p.Ala377Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1130C>T
  hgvsp: ENSP00000473001.1:p.Ala377Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1130C>T
  hgvsp: ENSP00000470731.1:p.Ala377Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1130C>T
  hgvsp: ENSP00000252771.7:p.Ala377Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1130C>T
  hgvsp: ENSP00000437978.1:p.Ala377Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.980C>T
  hgvsp: ENSP00000472668.1:p.Ala327Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1151C>T
  hgvsp: ENSP00000470568.1:p.Ala384Val
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25706
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala377Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

19-17886932-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886932
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886932
    reference: chr 19
allele count: 1
allele frequency: 8.294487483618387e-6
allele num: 120562
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1144G>A
  hgvsp: ENSP00000373785.4:p.Ala382Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1144G>A
  hgvsp: ENSP00000470731.1:p.Ala382Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1144G>A
  hgvsp: ENSP00000437978.1:p.Ala382Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.994G>A
  hgvsp: ENSP00000472668.1:p.Ala332Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1165G>A
  hgvsp: ENSP00000470568.1:p.Ala389Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1144G>A
  hgvsp: ENSP00000472417.1:p.Ala382Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1144G>A
  hgvsp: ENSP00000252771.7:p.Ala382Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1144G>A
  hgvsp: ENSP00000470493.1:p.Ala382Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1144G>A
  hgvsp: ENSP00000473001.1:p.Ala382Thr
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10417
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala382Thr
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS

19-17886938-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886938
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886938
    reference: chr 19
allele count: 1
allele frequency: 8.280202036929701e-6
allele num: 120770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1171G>A
  hgvsp: ENSP00000470568.1:p.Ala391Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1150G>A
  hgvsp: ENSP00000472417.1:p.Ala384Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1150G>A
  hgvsp: ENSP00000473001.1:p.Ala384Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1150G>A
  hgvsp: ENSP00000437978.1:p.Ala384Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1150G>A
  hgvsp: ENSP00000373785.4:p.Ala384Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1150G>A
  hgvsp: ENSP00000252771.7:p.Ala384Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1150G>A
  hgvsp: ENSP00000470731.1:p.Ala384Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1150G>A
  hgvsp: ENSP00000470493.1:p.Ala384Thr
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1000G>A
  hgvsp: ENSP00000472668.1:p.Ala334Thr
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10473
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9524
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4408
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala384Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

19-17886939-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886939
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886939
    reference: chr 19
allele count: 4
allele frequency: 3.311313101210285e-5
allele num: 120798
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1151C>T
  hgvsp: ENSP00000373785.4:p.Ala384Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1151C>T
  hgvsp: ENSP00000473001.1:p.Ala384Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1151C>T
  hgvsp: ENSP00000437978.1:p.Ala384Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1151C>T
  hgvsp: ENSP00000470493.1:p.Ala384Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1001C>T
  hgvsp: ENSP00000472668.1:p.Ala334Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1151C>T
  hgvsp: ENSP00000472417.1:p.Ala384Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1172C>T
  hgvsp: ENSP00000470568.1:p.Ala391Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1151C>T
  hgvsp: ENSP00000252771.7:p.Ala384Val
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1151C>T
  hgvsp: ENSP00000470731.1:p.Ala384Val
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5217
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3440
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala384Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

19-17886940-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886940
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886940
    reference: chr 19
allele count: 57892
allele frequency: 4.782881692002644e-1
allele num: 121040
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1152G>A
  hgvsp: ENST00000389133.4:c.1152G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1173G>A
  hgvsp: ENST00000597512.1:c.1173G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1152G>A
  hgvsp: ENST00000596951.1:c.1152G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1152G>A
  hgvsp: ENST00000594202.1:c.1152G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1152G>A
  hgvsp: ENST00000539407.1:c.1152G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1152G>A
  hgvsp: ENST00000600676.1:c.1152G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1152G>A
  hgvsp: ENST00000596536.1:c.1152G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1152G>A
  hgvsp: ENST00000252771.7:c.1152G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1002G>A
  hgvsp: ENST00000595033.1:c.1002G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 5.25e1
  variant carriers: 838
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 7.25e1
  variant carriers: 1059
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 210
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 8.25e1
  variant carriers: 1127
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 883
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 3.25e1
  variant carriers: 457
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 6.75e1
  variant carriers: 970
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 2987
  bin: 3.75e1
  variant carriers: 548
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.75e1
  variant carriers: 1027
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 3455
  bin: 2.75e1
  variant carriers: 373
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 6.25e1
  variant carriers: 953
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 4.75e1
  variant carriers: 767
genotype depth: GenotypeDepth
  all individuals: 30180
  bin: 9.75e1
  variant carriers: 30081
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 8.75e1
  variant carriers: 1327
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 9.25e1
  variant carriers: 1484
genotype depth: GenotypeDepth
  all individuals: 3103
  bin: 2.25e1
  variant carriers: 324
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 4.25e1
  variant carriers: 639
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 21
hgvs: p.Ala384Ala
num of homozygotes: 14720
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

19-17886955-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886955
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886955
    reference: chr 19
allele count: 1
allele frequency: 8.251233559417133e-6
allele num: 121194
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1167T>G
  hgvsp: ENST00000389133.4:c.1167T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1167T>G
  hgvsp: ENST00000600676.1:c.1167T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1167T>G
  hgvsp: ENST00000252771.7:c.1167T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1167T>G
  hgvsp: ENST00000596951.1:c.1167T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1167T>G
  hgvsp: ENST00000596536.1:c.1167T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1167T>G
  hgvsp: ENST00000594202.1:c.1167T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1167T>G
  hgvsp: ENST00000539407.1:c.1167T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1017T>G
  hgvsp: ENST00000595033.1:c.1017T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1188T>G
  hgvsp: ENST00000597512.1:c.1188T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30068
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1896
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu389Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD

19-17886967-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886967
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886967
    reference: chr 19
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1179A>G
  hgvsp: ENST00000252771.7:c.1179A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.2A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1179A>G
  hgvsp: ENST00000594202.1:c.1179A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1179A>G
  hgvsp: ENST00000596951.1:c.1179A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1179A>G
  hgvsp: ENST00000600676.1:c.1179A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1179A>G
  hgvsp: ENST00000539407.1:c.1179A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1200A>G
  hgvsp: ENST00000597512.1:c.1200A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1029A>G
  hgvsp: ENST00000595033.1:c.1029A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1179A>G
  hgvsp: ENST00000596536.1:c.1179A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1179A>G
  hgvsp: ENST00000389133.4:c.1179A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30069
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro393Pro
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

19-17886968-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886968
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886968
    reference: chr 19
allele count: 1
allele frequency: 8.247286642694553e-6
allele num: 121252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1180G>A
  hgvsp: ENSP00000470731.1:p.Gly394Arg
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1180G>A
  hgvsp: ENSP00000437978.1:p.Gly394Arg
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1180G>A
  hgvsp: ENSP00000472417.1:p.Gly394Arg
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1180G>A
  hgvsp: ENSP00000470493.1:p.Gly394Arg
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1201G>A
  hgvsp: ENSP00000470568.1:p.Gly401Arg
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1180G>A
  hgvsp: ENSP00000473001.1:p.Gly394Arg
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1030G>A
  hgvsp: ENSP00000472668.1:p.Gly344Arg
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1180G>A
  hgvsp: ENSP00000373785.4:p.Gly394Arg
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1180G>A
  hgvsp: ENSP00000252771.7:p.Gly394Arg
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.3G>A
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30070
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly394Arg
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

19-17886968-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886968
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886968
    reference: chr 19
allele count: 1
allele frequency: 8.247286642694553e-6
allele num: 121252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1030G>T
  hgvsp: ENSP00000472668.1:p.Gly344Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1180G>T
  hgvsp: ENSP00000470493.1:p.Gly394Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1180G>T
  hgvsp: ENSP00000373785.4:p.Gly394Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1180G>T
  hgvsp: ENSP00000252771.7:p.Gly394Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1180G>T
  hgvsp: ENSP00000472417.1:p.Gly394Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1201G>T
  hgvsp: ENSP00000470568.1:p.Gly401Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1180G>T
  hgvsp: ENSP00000473001.1:p.Gly394Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.3G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1180G>T
  hgvsp: ENSP00000470731.1:p.Gly394Trp
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1180G>T
  hgvsp: ENSP00000437978.1:p.Gly394Trp
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30070
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly394Trp
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

19-17886977-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886977
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886977
    reference: chr 19
allele count: 2
allele frequency: 1.648994937585542e-5
allele num: 121286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1182+7C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1203+7C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1182+7C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1032+7C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1182+7C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1182+7C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1182+7C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1182+7C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1182+7C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.12C>T
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30070
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 7.75e1
  variant carriers: 0
hgvs: c.1182+7C>T
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

19-17886978-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886978
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886978
    reference: chr 19
allele count: 17
allele frequency: 1.401483924154988e-4
allele num: 121300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1032+8G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1182+8G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1182+8G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1182+8G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1182+8G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.13G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1182+8G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1182+8G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1203+8G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1182+8G>A
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30078
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
hgvs: c.1182+8G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

19-17886983-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886983
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886983
    reference: chr 19
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1182+13A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1182+13A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1182+13A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.18A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1182+13A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1182+13A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1032+13A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1182+13A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1182+13A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1203+13A>G
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30079
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3953
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum

19-17886986-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886986
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886986
    reference: chr 19
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.21G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1032+16G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1182+16G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1182+16G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1182+16G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1182+16G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1182+16G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1182+16G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1182+16G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1203+16G>T
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30079
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48219
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1326
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

19-17886990-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886990
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886990
    reference: chr 19
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1182+20C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1032+20C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.25C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1182+20C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1182+20C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1182+20C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1182+20C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1203+20C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1182+20C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1182+20C>T
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30079
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48221
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

19-17886996-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17886996
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17886996
    reference: chr 19
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.31G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1182+26G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1182+26G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1032+26G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1203+26G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1182+26G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1182+26G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1182+26G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1182+26G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1182+26G>A
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30079
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3976
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

19-17887001-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887001
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887001
    reference: chr 19
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1182+31G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1182+31G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1182+31G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1182+31G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1182+31G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1203+31G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.36G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1182+31G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1182+31G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1032+31G>C
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30079
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

19-17887009-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887009
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887009
    reference: chr 19
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1032+39G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1182+39G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1203+39G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1182+39G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1182+39G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1182+39G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1182+39G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.44G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1182+39G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1182+39G>A
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30089
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

19-17887010-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887010
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887010
    reference: chr 19
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1182+40G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1203+40G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1182+40G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1032+40G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1182+40G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1182+40G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.45G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1182+40G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1182+40G>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1182+40G>C
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30087
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

19-17887015-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887015
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887015
    reference: chr 19
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1183-41C>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1183-41C>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1183-41C>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1204-41C>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1183-41C>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.50C>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1033-41C>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1183-41C>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1183-41C>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1183-41C>G
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30105
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1332
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP

19-17887017-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887017
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887017
    reference: chr 19
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1183-39G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1183-39G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1183-39G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1183-39G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1183-39G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1183-39G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1033-39G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.52G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1183-39G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1204-39G>T
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30103
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3953
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

19-17887022-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887022
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887022
    reference: chr 19
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.57C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1183-34C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1033-34C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1183-34C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1204-34C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1183-34C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1183-34C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1183-34C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1183-34C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1183-34C>T
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30106
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48282
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3957
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

19-17887024-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887024
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887024
    reference: chr 19
allele count: 110992
allele frequency: 9.143271385264268e-1
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.59T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1183-32T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1183-32T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1183-32T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1183-32T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1183-32T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1183-32T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1204-32T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1033-32T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1183-32T>C
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.75e1
  variant carriers: 301
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.25e1
  variant carriers: 698
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.75e1
  variant carriers: 501
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.75e1
  variant carriers: 417
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 225
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 2.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 3.25e1
  variant carriers: 124
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 234
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 8.75e1
  variant carriers: 609
genotype depth: GenotypeDepth
  all individuals: 55171
  bin: 9.75e1
  variant carriers: 55160
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.25e1
  variant carriers: 318
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 7.25e1
  variant carriers: 511
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 8.25e1
  variant carriers: 540
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.75e1
  variant carriers: 153
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 9.25e1
  variant carriers: 34
num of homozygotes: 50885
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

19-17887026-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887026
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887026
    reference: chr 19
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1204-30C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1183-30C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.61C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1183-30C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1183-30C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1183-30C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1183-30C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1183-30C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1183-30C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1033-30C>T
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45123
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP

19-17887027-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887027
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887027
    reference: chr 19
allele count: 3
allele frequency: 2.471006852925672e-5
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.62G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1183-29G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1033-29G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1183-29G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1183-29G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1204-29G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1183-29G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1183-29G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1183-29G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1183-29G>A
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45123
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

19-17887032-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887032
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887032
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1183-24T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1033-24T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1183-24T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1204-24T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.67T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1183-24T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1183-24T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1183-24T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1183-24T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1183-24T>C
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45122
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59430
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

19-17887034-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887034
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887034
    reference: chr 19
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.69A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1183-22A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1183-22A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1033-22A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1183-22A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1204-22A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1183-22A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1183-22A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1183-22A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1183-22A>G
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45122
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59430
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

19-17887040-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887040
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887040
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1183-16C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1033-16C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1183-16C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.75C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1183-16C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1183-16C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1183-16C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1183-16C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1183-16C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1204-16C>T
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-17887044-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887044
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887044
    reference: chr 19
allele count: 294
allele frequency: 2.421586715867159e-3
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1183-12C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.79C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1183-12C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1183-12C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1204-12C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1183-12C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1183-12C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1033-12C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1183-12C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1183-12C>T
  variant of: http://identifiers.org/hgnc/29002
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45127
  bin: 9.75e1
  variant carriers: 274
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 6
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

19-17887053-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887053
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887053
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1183-3C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1183-3C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1183-3C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1183-3C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1183-3C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.88C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1183-3C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1204-3C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1033-3C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1183-3C>T
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45094
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1183-3C>T
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum

19-17887079-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887079
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887079
    reference: chr 19
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1206A>G
  hgvsp: ENST00000539407.1:c.1206A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1206A>G
  hgvsp: ENST00000596951.1:c.1206A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.114A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1206A>G
  hgvsp: ENST00000594202.1:c.1206A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1206A>G
  hgvsp: ENST00000600676.1:c.1206A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1206A>G
  hgvsp: ENST00000389133.4:c.1206A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1227A>G
  hgvsp: ENST00000597512.1:c.1227A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1056A>G
  hgvsp: ENST00000595033.1:c.1056A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1206A>G
  hgvsp: ENST00000252771.7:c.1206A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1206A>G
  hgvsp: ENST00000596536.1:c.1206A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45093
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1206A>G
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

19-17887081-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887081
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887081
    reference: chr 19
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1207+1G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1207+1G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1207+1G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1228+1G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1207+1G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1207+1G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.115+1G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1207+1G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1207+1G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1057+1G>A
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45093
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
hgvs: c.1207+1G>A
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-17887090-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887090
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887090
    reference: chr 19
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1057+10C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1207+10C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1207+10C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1207+10C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1207+10C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1228+10C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1207+10C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1207+10C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.115+10C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1207+10C>T
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45093
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

19-17887114-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887114
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887114
    reference: chr 19
allele count: 8
allele frequency: 6.590002965501334e-5
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1228+34T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1207+34T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1207+34T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1207+34T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1207+34T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1207+34T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1207+34T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.115+34T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1207+34T>C
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1057+34T>C
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45095
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

19-17887116-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887116
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887116
    reference: chr 19
allele count: 6
allele frequency: 4.942502224126001e-5
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1207+36C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1207+36C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.115+36C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1207+36C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1207+36C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1207+36C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1207+36C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1228+36C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1207+36C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1057+36C>T
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45095
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

19-17887123-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887123
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887123
    reference: chr 19
allele count: 8
allele frequency: 6.590220113351786e-5
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1207+43A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1207+43A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1207+43A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1207+43A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1207+43A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1207+43A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1207+43A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.115+43A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1228+43A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1057+43A>G
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45094
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

19-17887126-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887126
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887126
    reference: chr 19
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1057+46G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1207+46G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1228+46G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1207+46G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1207+46G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1207+46G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1207+46G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1207+46G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1207+46G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.115+46G>A
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45093
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59424
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ

19-17887127-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887127
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887127
    reference: chr 19
allele count: 13
allele frequency: 1.070928412554576e-4
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1207+47A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1207+47A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1207+47A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1207+47A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1057+47A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1207+47A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1228+47A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1207+47A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.115+47A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1207+47A>G
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45093
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-17887128-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887128
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887128
    reference: chr 19
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1207+48G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1207+48G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1228+48G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1207+48G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1207+48G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1207+48G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1207+48G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1057+48G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1207+48G>A
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.115+48G>A
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45091
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

19-17887130-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887130
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887130
    reference: chr 19
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1207+50C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1228+50C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1207+50C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1207+50C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1207+50C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1207+50C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1207+50C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1207+50C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.115+50C>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1057+50C>T
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45091
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

19-17887132-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887132
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887132
    reference: chr 19
allele count: 3
allele frequency: 2.471536142096851e-5
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1207+52A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1207+52A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1207+52A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1207+52A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1207+52A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.115+52A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1057+52A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1207+52A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1228+52A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1207+52A>G
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45091
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

19-17887408-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887408
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887408
    reference: chr 19
allele count: 6
allele frequency: 4.972485579791819e-5
allele num: 120664
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1208-36G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1058-36G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1208-36G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1208-36G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1229-36G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1208-36G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.116-36G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1208-36G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1208-36G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1208-36G>T
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7361
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5503
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8459
  bin: 9.75e1
  variant carriers: 6
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-17887414-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887414
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887414
    reference: chr 19
allele count: 1
allele frequency: 8.288162845823595e-6
allele num: 120654
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1208-30A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1208-30A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1208-30A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1208-30A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1208-30A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1229-30A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1208-30A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1208-30A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1058-30A>G
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.116-30A>G
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

19-17887422-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17887422
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 17887422
    reference: chr 19
allele count: 2
allele frequency: 1.657330372236402e-5
allele num: 120676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000373785
  ensembl transcript: ENST00000389133
  gene symbol: FCHO1
  hgvsc: ENST00000389133.4:c.1208-22G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000473001
  ensembl transcript: ENST00000594202
  gene symbol: FCHO1
  hgvsc: ENST00000594202.1:c.1208-22G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472417
  ensembl transcript: ENST00000596951
  gene symbol: FCHO1
  hgvsc: ENST00000596951.1:c.1208-22G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470568
  ensembl transcript: ENST00000597512
  gene symbol: FCHO1
  hgvsc: ENST00000597512.1:c.1229-22G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000437978
  ensembl transcript: ENST00000539407
  gene symbol: FCHO1
  hgvsc: ENST00000539407.1:c.1208-22G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470731
  ensembl transcript: ENST00000596536
  gene symbol: FCHO1
  hgvsc: ENST00000596536.1:c.1208-22G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000472668
  ensembl transcript: ENST00000595033
  gene symbol: FCHO1
  hgvsc: ENST00000595033.1:c.1058-22G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000470493
  ensembl transcript: ENST00000600676
  gene symbol: FCHO1
  hgvsc: ENST00000600676.1:c.1208-22G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl protein: ENSP00000252771
  ensembl transcript: ENST00000252771
  gene symbol: FCHO1
  hgvsc: ENST00000252771.7:c.1208-22G>T
  variant of: http://identifiers.org/hgnc/29002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130475
  ensembl transcript: ENST00000599766
  gene symbol: FCHO1
  hgvsc: ENST00000599766.1:n.116-22G>T
  variant of: http://identifiers.org/hgnc/29002
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21050
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: G

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4293
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25565
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 168
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4045
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11047
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3407
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3069
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4976
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2495
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.698677800974252e-5
allele num: 11496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.645493745986116e-5
allele num: 65398
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

MQRankSum
type: SiteQuality
SIO_000300: -3.94e-1

FS
type: SiteQuality
SIO_000300: 5.27e-1

DP
type: SiteQuality
SIO_000300: 2.204851e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.085e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-1

QD
type: SiteQuality
SIO_000300: 1.044e1

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4982
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11113
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3412
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3072
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2502
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4301
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4053
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25575
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528070657987225e-5
allele num: 65442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.71e-1

FS
type: SiteQuality
SIO_000300: 2.868e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 9.18e0

DP
type: SiteQuality
SIO_000300: 2.206254e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.47e-1

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4989
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3074
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3412
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25576
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 142
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4306
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4055
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11152
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65488
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e-1

DP
type: SiteQuality
SIO_000300: 2.206563e6

QD
type: SiteQuality
SIO_000300: 1.697e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 4.079e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4304
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11128
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4053
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3412
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25589
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 4986
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3073
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 6
allele frequency: 5.914826498422713e-4
allele num: 10144
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.739130434782609e-4
allele num: 11500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.374171679848536e-4
allele num: 65494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.99e-1

QD
type: SiteQuality
SIO_000300: 1.289e1

MQ
type: SiteQuality
SIO_000300: 5.975e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 5.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.73e0

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

DP
type: SiteQuality
SIO_000300: 2.207473e6

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11137
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3412
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4306
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25587
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5001
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3080
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4054
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.053714844107857e-5
allele num: 65494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.07e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 2.207864e6

FS
type: SiteQuality
SIO_000300: 7.475e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 1.335e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.15e-1

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 8.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65528
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.921831819976313e-4
allele num: 10132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 7.231e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e0

QD
type: SiteQuality
SIO_000300: 1.302e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 2.207885e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.76e-1

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 89

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 47
allele frequency: 7.127691841067638e-3
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.36322869955157e-3
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 39
allele frequency: 5.952199261316809e-4
allele num: 65522
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073858114674441e-5
allele num: 16464
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.56e0

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

QD
type: SiteQuality
SIO_000300: 1.298e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

MQ
type: SiteQuality
SIO_000300: 5.964e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 2.212673e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.51e-1

GenotypeQuality
all individuals: 906
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2502
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10968
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 4302
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variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3411
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4053
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3091
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.697164724299878e-5
allele num: 11498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.180916391119509e-4
allele num: 8468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.69e-1

DP
type: SiteQuality
SIO_000300: 2.211514e6

FS
type: SiteQuality
SIO_000300: 1.818e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.45e0

QD
type: SiteQuality
SIO_000300: 1.419e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.58e-1

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4053
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variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 154
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variant carriers: 0

GenotypeQuality
all individuals: 3090
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variant carriers: 0

GenotypeQuality
all individuals: 80
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10925
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variant carriers: 0

GenotypeQuality
all individuals: 25633
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 249
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.63102469399591e-5
allele num: 65522
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

FS
type: SiteQuality
SIO_000300: 3.221e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.823e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.5e-2

MQ
type: SiteQuality
SIO_000300: 5.98e1

MQRankSum
type: SiteQuality
SIO_000300: -1.76e-1

DP
type: SiteQuality
SIO_000300: 2.211511e6

QD
type: SiteQuality
SIO_000300: 1.307e1

GenotypeQuality
all individuals: 292
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4294
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.609603340292275e-4
allele num: 11496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.927e1

VQSLOD
type: SiteQuality
SIO_000300: 5.75e-1

FS
type: SiteQuality
SIO_000300: 4.911e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.153e0

DP
type: SiteQuality
SIO_000300: 2.210197e6

QD
type: SiteQuality
SIO_000300: 1.255e1

GenotypeQuality
all individuals: 314
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528257480820369e-5
allele num: 65434
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.700191404210893e-5
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

DP
type: SiteQuality
SIO_000300: 2.207339e6

MQRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e-1

QD
type: SiteQuality
SIO_000300: 1.314e1

FS
type: SiteQuality
SIO_000300: 2.266e0

MQ
type: SiteQuality
SIO_000300: 5.891e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.9e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 255
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10033
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529426159305029e-5
allele num: 65384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.563e0

MQRankSum
type: SiteQuality
SIO_000300: 5.06e-1

DP
type: SiteQuality
SIO_000300: 2.206328e6

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

QD
type: SiteQuality
SIO_000300: 1.062e1

GenotypeQuality
all individuals: 4291
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.25e1
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GenotypeQuality
all individuals: 108
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
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variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 2.25e1
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GenotypeQuality
all individuals: 4054
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4877
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10033
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 264
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GenotypeQuality
all individuals: 156
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GenotypeQuality
all individuals: 25638
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3413
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.936406995230525e-5
allele num: 10064
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65384
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

DP
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QD
type: SiteQuality
SIO_000300: 1.062e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.812e0

FS
type: SiteQuality
SIO_000300: 4.563e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10062
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.529332599253686e-5
allele num: 65388
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.700191404210893e-5
allele num: 11494
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.65e-1

DP
type: SiteQuality
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ClippingRankSum
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SIO_000300: -3.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.077549532028686e-5
allele num: 16454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65374
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11492
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10062
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
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SIO_000300: 2.205777e6

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.668e0

QD
type: SiteQuality
SIO_000300: 1.756e1

MQRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

FS
type: SiteQuality
SIO_000300: 9.47e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529566520847992e-5
allele num: 65378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21580547112462e-4
allele num: 16450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.703220191470844e-5
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.221e0

FS
type: SiteQuality
SIO_000300: 3.345e0

DP
type: SiteQuality
SIO_000300: 2.205781e6

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.67e-1

QD
type: SiteQuality
SIO_000300: 1.429e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.35e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.529098749197223e-5
allele num: 65398
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQ
type: SiteQuality
SIO_000300: 5.971e1

FS
type: SiteQuality
SIO_000300: 7.572e0

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

QD
type: SiteQuality
SIO_000300: 1.22e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

DP
type: SiteQuality
SIO_000300: 2.206584e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
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allele frequency: 1.21580547112462e-4
allele num: 16450
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8476
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65434
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Other
type: Population
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DP
type: SiteQuality
SIO_000300: 2.208433e6

BaseQRankSum
type: SiteQuality
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QD
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MQRankSum
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.767e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.95e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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allele count: 26
allele frequency: 2.578341927806426e-3
allele num: 10084
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.706251088281386e-5
allele num: 11486
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65458
num of homozygotes: 0

Other
type: Population
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VQSLOD
type: SiteQuality
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ClippingRankSum
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MQ
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QD
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FS
type: SiteQuality
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DP
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10098
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European (Finnish)
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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Other
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FS
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ReadPosRankSum
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MQ
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QD
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MQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 65534
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Other
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6590
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.213862e6

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 4.285e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.87e-1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.71e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52592547379986e-5
allele num: 65534
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 1.1e-3

MQ
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SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: 3.71e-1

DP
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FS
type: SiteQuality
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MQRankSum
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BaseQRankSum
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QD
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SIO_000300: 1.559e1

VQSLOD
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ClippingRankSum
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SIO_000300: 1.87e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8496
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African
type: Population
allele count: 1
allele frequency: 9.8833761612967e-5
allele num: 10118
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.575402635431918e-5
allele num: 65568
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.457e0

MQRankSum
type: SiteQuality
SIO_000300: -2.33e-1

FS
type: SiteQuality
SIO_000300: 3.374e0

ReadPosRankSum
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SIO_000300: -8.400000000000001e-2

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.978e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

DP
type: SiteQuality
SIO_000300: 2.215052e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.219326322206981e-4
allele num: 65610
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.947108742845866e-4
allele num: 10134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.29e-1

DP
type: SiteQuality
SIO_000300: 2.217551e6

VQSLOD
type: SiteQuality
SIO_000300: 3.66e0

QD
type: SiteQuality
SIO_000300: 1.535e1

MQ
type: SiteQuality
SIO_000300: 5.981e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523693432881304e-5
allele num: 65630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.415e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.078e0

MQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.84e-1

DP
type: SiteQuality
SIO_000300: 2.218337e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e0

MQ
type: SiteQuality
SIO_000300: 5.891e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65826
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 22
allele frequency: 1.337223437879893e-3
allele num: 16452
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
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East Asian
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ClippingRankSum
type: SiteQuality
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DP
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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FS
type: SiteQuality
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VQSLOD
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MQ
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SIO_000300: 5.98e1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65824
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10210
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6600
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East Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

Other
type: Population
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South Asian
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allele frequency: 6.078288353999514e-5
allele num: 16452
num of homozygotes: 0

FS
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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DP
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VQSLOD
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MQ
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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African
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allele frequency: 9.712509712509713e-5
allele num: 10296
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European (Non-Finnish)
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European (Finnish)
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East Asian
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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DP
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MQ
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QD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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allele frequency: 1.511944360447536e-4
allele num: 6614
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Other
type: Population
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FS
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
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VQSLOD
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SIO_000300: 3.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.49e-1

DP
type: SiteQuality
SIO_000300: 2.234322e6

QD
type: SiteQuality
SIO_000300: 1.618e1

GenotypeQuality
all individuals: 3223
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11142
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2525
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25734
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4415
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4133
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.526798647996137e-5
allele num: 66272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.87e-1

QD
type: SiteQuality
SIO_000300: 1.374e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.62e-1

FS
type: SiteQuality
SIO_000300: 6.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.351e0

DP
type: SiteQuality
SIO_000300: 2.23528e6

GenotypeQuality
all individuals: 1240
bin: 8.25e1
variant carriers: 68

GenotypeQuality
all individuals: 119
bin: 2.25e1
variant carriers: 8

GenotypeQuality
all individuals: 1292
bin: 7.75e1
variant carriers: 41

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 7

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 968
bin: 7.25e1
variant carriers: 31

GenotypeQuality
all individuals: 1042
bin: 9.25e1
variant carriers: 54

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 19

GenotypeQuality
all individuals: 765
bin: 8.75e1
variant carriers: 38

GenotypeQuality
all individuals: 3338
bin: 6.25e1
variant carriers: 35

GenotypeQuality
all individuals: 1598
bin: 6.75e1
variant carriers: 40

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 40

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 21

GenotypeQuality
all individuals: 49963
bin: 9.75e1
variant carriers: 42737

African
type: Population
allele count: 5661
allele frequency: 5.45270660759006e-1
allele num: 10382
num of homozygotes: 1533

European (Non-Finnish)
type: Population
allele count: 27176
allele frequency: 4.089199193475578e-1
allele num: 66458
num of homozygotes: 5623

South Asian
type: Population
allele count: 8836
allele frequency: 5.358399029714979e-1
allele num: 16490
num of homozygotes: 2414

East Asian
type: Population
allele count: 6581
allele frequency: 7.625724217844728e-1
allele num: 8630
num of homozygotes: 2509

Latino
type: Population
allele count: 7059
allele frequency: 6.105345096004151e-1
allele num: 11562
num of homozygotes: 2170

European (Finnish)
type: Population
allele count: 2174
allele frequency: 3.287961282516637e-1
allele num: 6612
num of homozygotes: 368

Other
type: Population
allele count: 405
allele frequency: 4.470198675496689e-1
allele num: 906
num of homozygotes: 103

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

DP
type: SiteQuality
SIO_000300: 5.587833e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e0

FS
type: SiteQuality
SIO_000300: 6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.49e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

QD
type: SiteQuality
SIO_000300: 2.188e1

GenotypeQuality
all individuals: 132
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3845
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1145
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48200
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1445
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.18e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.66e-1

DP
type: SiteQuality
SIO_000300: 5.561904e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.47e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.347e1

GenotypeQuality
all individuals: 903
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1900
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1156
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48205
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1461
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3885
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501501501501501e-5
allele num: 66600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

FS
type: SiteQuality
SIO_000300: 4.145e0

VQSLOD
type: SiteQuality
SIO_000300: 7.05e-1

QD
type: SiteQuality
SIO_000300: 1.201e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.313e0

DP
type: SiteQuality
SIO_000300: 5.563634e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.59e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.15e-1

GenotypeDepth
all individuals: 3449
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1323
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48206
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1462
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3894
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1156
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 8.981e0

VQSLOD
type: SiteQuality
SIO_000300: 2.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-1

QD
type: SiteQuality
SIO_000300: 1.292e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.899e0

MQ
type: SiteQuality
SIO_000300: 5.988e1

MQRankSum
type: SiteQuality
SIO_000300: -2.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.97e-1

DP
type: SiteQuality
SIO_000300: 5.563897e6

GenotypeDepth
all individuals: 1109
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48206
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1156
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1323
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3894
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1462
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.899e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 5.563897e6

QD
type: SiteQuality
SIO_000300: 1.292e1

FS
type: SiteQuality
SIO_000300: 8.981e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.97e-1

MQ
type: SiteQuality
SIO_000300: 5.988e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.9e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.38e-1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1916
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1472
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3919
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1325
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48208
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.946e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.115e0

QD
type: SiteQuality
SIO_000300: 2.594e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.31e-1

FS
type: SiteQuality
SIO_000300: 1.256e0

VQSLOD
type: SiteQuality
SIO_000300: -1.928e0

DP
type: SiteQuality
SIO_000300: 5.565157e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.994e0

MQRankSum
type: SiteQuality
SIO_000300: 5.08e-1

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1925
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3919
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1565
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1325
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48216
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 1471
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.250630176449406e-4
allele num: 66648
num of homozygotes: 0

African
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allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.93e-1

QD
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BaseQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: -3.0e-4

MQRankSum
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ClippingRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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DP
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MQ
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ReadPosRankSum
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VQSLOD
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FS
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
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QD
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SIO_000300: 1.173e1

DP
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: 6.2e-3

FS
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SIO_000300: 9.198e0

ClippingRankSum
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SIO_000300: 7.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.74e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.28e-1

BaseQRankSum
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SIO_000300: -1.08e-1

FS
type: SiteQuality
SIO_000300: 4.413e0

MQRankSum
type: SiteQuality
SIO_000300: 8.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

QD
type: SiteQuality
SIO_000300: 1.214e1

DP
type: SiteQuality
SIO_000300: 5.568298e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 7.5e-3

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.961e1

BaseQRankSum
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.362e0

ReadPosRankSum
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SIO_000300: -6.51e-1

QD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

African
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Other
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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DP
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MQ
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BaseQRankSum
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VQSLOD
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FS
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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Other
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Latino
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South Asian
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DP
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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QD
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Non-Finnish)
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African
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East Asian
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Latino
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European (Finnish)
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South Asian
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InbreedingCoeff
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FS
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DP
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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MQ
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QD
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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European (Finnish)
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European (Non-Finnish)
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num of homozygotes: 0

African
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Latino
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East Asian
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.436e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.574e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.91e0

MQ
type: SiteQuality
SIO_000300: 5.705e1

FS
type: SiteQuality
SIO_000300: 7.9663e1

QD
type: SiteQuality
SIO_000300: 7.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.442e0

DP
type: SiteQuality
SIO_000300: 5.574438e6

GenotypeQuality
all individuals: 913
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 1163
bin: 7.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 1953
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.851e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.86e-1

DP
type: SiteQuality
SIO_000300: 5.574079e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.645e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.3e-1

QD
type: SiteQuality
SIO_000300: 2.026e1

FS
type: SiteQuality
SIO_000300: 4.789e0

MQRankSum
type: SiteQuality
SIO_000300: -9.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.009e0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1332
bin: 9.25e1
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GenotypeQuality
all individuals: 1161
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.576e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.15e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

MQRankSum
type: SiteQuality
SIO_000300: 7.65e-1

FS
type: SiteQuality
SIO_000300: 4.103e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.039e0

DP
type: SiteQuality
SIO_000300: 5.574522e6

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 10

GenotypeQuality
all individuals: 148
bin: 6.25e1
variant carriers: 14

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 3

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 14

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 59933

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 7

GenotypeQuality
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variant carriers: 27

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 9

GenotypeQuality
all individuals: 52
bin: 7.25e1
variant carriers: 14

GenotypeQuality
all individuals: 68
bin: 6.75e1
variant carriers: 17

GenotypeQuality
all individuals: 62
bin: 7.75e1
variant carriers: 23

South Asian
type: Population
allele count: 14985
allele frequency: 9.075218023255814e-1
allele num: 16512
num of homozygotes: 6821

European (Non-Finnish)
type: Population
allele count: 63015
allele frequency: 9.442146902813989e-1
allele num: 66738
num of homozygotes: 29756

Latino
type: Population
allele count: 10364
allele frequency: 8.953006219765031e-1
allele num: 11576
num of homozygotes: 4632

European (Finnish)
type: Population
allele count: 6386
allele frequency: 9.655276685817962e-1
allele num: 6614
num of homozygotes: 3090

African
type: Population
allele count: 8389
allele frequency: 8.061695175860081e-1
allele num: 10406
num of homozygotes: 3355

East Asian
type: Population
allele count: 7007
allele frequency: 8.111831442463533e-1
allele num: 8638
num of homozygotes: 2838

Other
type: Population
allele count: 846
allele frequency: 9.317180616740088e-1
allele num: 908
num of homozygotes: 393

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

QD
type: SiteQuality
SIO_000300: 3.213e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.08e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

DP
type: SiteQuality
SIO_000300: 1.4754776e7

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 172
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GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 135
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GenotypeQuality
all individuals: 150
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GenotypeQuality
all individuals: 59430
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GenotypeQuality
all individuals: 177
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.55e-1

FS
type: SiteQuality
SIO_000300: 1.743e0

QD
type: SiteQuality
SIO_000300: 1.375e1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 7.320434e6

GenotypeQuality
all individuals: 183
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 321
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variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 108
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GenotypeQuality
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GenotypeQuality
all individuals: 59430
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 150
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495324862143371e-5
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

QD
type: SiteQuality
SIO_000300: 1.233e1

VQSLOD
type: SiteQuality
SIO_000300: 9.68e-1

FS
type: SiteQuality
SIO_000300: 5.21e-1

DP
type: SiteQuality
SIO_000300: 7.320304e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.63e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 186
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GenotypeQuality
all individuals: 328
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GenotypeQuality
all individuals: 109
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GenotypeQuality
all individuals: 176
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 150
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GenotypeQuality
all individuals: 169
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.319953e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.22e-1

FS
type: SiteQuality
SIO_000300: 3.482e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.62e-1

QD
type: SiteQuality
SIO_000300: 1.219e1

MQRankSum
type: SiteQuality
SIO_000300: -3.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.53e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 327
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 185
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GenotypeQuality
all individuals: 136
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.31986e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e0

QD
type: SiteQuality
SIO_000300: 1.567e1

VQSLOD
type: SiteQuality
SIO_000300: -1.584e0

FS
type: SiteQuality
SIO_000300: 2.177e0

MQ
type: SiteQuality
SIO_000300: 5.792e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.43e0

GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 151
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 0
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GenotypeQuality
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GenotypeQuality
all individuals: 177
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GenotypeQuality
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GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 109
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GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 167
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GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 59430
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.239e1

DP
type: SiteQuality
SIO_000300: 7.319751e6

VQSLOD
type: SiteQuality
SIO_000300: 1.9e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

MQ
type: SiteQuality
SIO_000300: 5.906e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.722e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.76e-1

GenotypeQuality
all individuals: 59430
bin: 9.75e1
variant carriers: 288

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 10
allele frequency: 8.637070305752289e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 282
allele frequency: 2.709975014414761e-2
allele num: 10406
num of homozygotes: 6

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.357e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.9e-2

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: 6.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.72e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.992e0

MQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

DP
type: SiteQuality
SIO_000300: 7.328409e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59427
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 150
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.71e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
SIO_000300: 6.223e0

DP
type: SiteQuality
SIO_000300: 7.289946e6

QD
type: SiteQuality
SIO_000300: 2.095e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.1e-2

GenotypeDepth
all individuals: 715
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59427
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 110
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.232e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.289749e6

MQRankSum
type: SiteQuality
SIO_000300: 7.88e-1

FS
type: SiteQuality
SIO_000300: 7.196e0

VQSLOD
type: SiteQuality
SIO_000300: 5.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.061e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59427
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.306e0

QD
type: SiteQuality
SIO_000300: 1.39e1

DP
type: SiteQuality
SIO_000300: 7.289495e6

MQRankSum
type: SiteQuality
SIO_000300: 7.26e-1

FS
type: SiteQuality
SIO_000300: 2.886e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.84e-1

MQ
type: SiteQuality
SIO_000300: 5.913e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.86e-1

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
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variant carriers: 0

GenotypeQuality
all individuals: 108
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59428
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.291e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

QD
type: SiteQuality
SIO_000300: 1.503e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 3.401e0

DP
type: SiteQuality
SIO_000300: 7.289315e6

VQSLOD
type: SiteQuality
SIO_000300: 6.43e-1

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 8.75e1
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GenotypeQuality
all individuals: 145
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GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59428
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.198897014746433e-4
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.947e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.42e0

DP
type: SiteQuality
SIO_000300: 7.289138e6

VQSLOD
type: SiteQuality
SIO_000300: 5.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.94e-1

QD
type: SiteQuality
SIO_000300: 1.383e1

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 310
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variant carriers: 0

GenotypeQuality
all individuals: 130
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
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GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
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GenotypeQuality
all individuals: 170
bin: 6.75e1
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GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
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GenotypeQuality
all individuals: 102
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GenotypeQuality
all individuals: 180
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59425
bin: 9.75e1
variant carriers: 6

South Asian
type: Population
allele count: 5
allele frequency: 3.028100775193798e-4
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e-1

QD
type: SiteQuality
SIO_000300: 1.411e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 7.288702e6

MQRankSum
type: SiteQuality
SIO_000300: 4.94e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.830000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.85e0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
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GenotypeQuality
all individuals: 59424
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
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GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
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GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.244280101687081e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.407e1

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-2

FS
type: SiteQuality
SIO_000300: 1.738e0

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

DP
type: SiteQuality
SIO_000300: 7.288417e6

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.24e-1

QD
type: SiteQuality
SIO_000300: 1.381e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e0

FS
type: SiteQuality
SIO_000300: 2.828e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 7.288072e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.895e0

MQ
type: SiteQuality
SIO_000300: 5.935e1

GenotypeQuality
all individuals: 98
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59425
bin: 9.75e1
variant carriers: 13

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 164
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 6.661821705426356e-4
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.519e1

FS
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 7.288008e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 280
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.773e0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.67e-1

DP
type: SiteQuality
SIO_000300: 7.287858e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

QD
type: SiteQuality
SIO_000300: 1.49e1

GenotypeQuality
all individuals: 262
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 161
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GenotypeQuality
all individuals: 179
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 59421
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 7.287579e6

MQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.21e-1

FS
type: SiteQuality
SIO_000300: 3.385e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

QD
type: SiteQuality
SIO_000300: 1.386e1

MQ
type: SiteQuality
SIO_000300: 5.955e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.039e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.152e0

GenotypeQuality
all individuals: 131
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 156
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variant carriers: 0

GenotypeQuality
all individuals: 144
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GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 99
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 164
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GenotypeQuality
all individuals: 59418
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496537665997182e-5
allele num: 66718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.21e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 7.287524e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.0e-1

QD
type: SiteQuality
SIO_000300: 1.37e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24177
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10687
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 432
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variant carriers: 0

GenotypeQuality
all individuals: 4804
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variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2228
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variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3950
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.640776699029126e-4
allele num: 16480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66148
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.155e0

QD
type: SiteQuality
SIO_000300: 1.21e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.443e0

DP
type: SiteQuality
SIO_000300: 1.976515e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.526e0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8452
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 7.5e0
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
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GenotypeQuality
all individuals: 10697
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GenotypeQuality
all individuals: 443
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variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
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GenotypeQuality
all individuals: 106
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
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GenotypeQuality
all individuals: 24440
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511898642315019e-5
allele num: 66142
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

FS
type: SiteQuality
SIO_000300: 1.645e0

DP
type: SiteQuality
SIO_000300: 1.978083e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.373e0

QD
type: SiteQuality
SIO_000300: 1.062e1

GenotypeQuality
all individuals: 10704
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1639
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
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GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4783
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3454
bin: 8.25e1
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GenotypeQuality
all individuals: 24708
bin: 6.25e1
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GenotypeQuality
all individuals: 8452
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 26
bin: 5.25e1
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GenotypeQuality
all individuals: 3936
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2221
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66152
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0