X-15529685-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015529685
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015529685
    reference: chr 0
allele count: 6
allele frequency: 1.354860562267133e-4
allele num: 44285
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.325+44G>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.325+44G>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.399+44G>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.325+44G>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6105
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4552
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2289
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5379
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4384
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

X-15529686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015529686
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015529686
    reference: chr 0
allele count: 2335
allele frequency: 5.35452210603559e-2
allele num: 43608
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.325+45C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.399+45C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.325+45C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.325+45C>T
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 2.75e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 718
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 3.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 154
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 63
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 524
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 667
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 2.25e1
  variant carriers: 279
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 2605
  bin: 3.75e1
  variant carriers: 115
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 153
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 5.25e1
  variant carriers: 84
genotype quality: GenotypeQuality
  all individuals: 1893
  bin: 6.25e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 8.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 5430
  bin: 1.25e1
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 4810
  bin: 1.75e1
  variant carriers: 210
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 7.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 3329
  bin: 2.75e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 2077
  bin: 2.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 9.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 1544
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 6.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 4.75e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 7.75e1
  variant carriers: 31
num of homozygotes: 253
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-15529688-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015529688
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015529688
    reference: chr 0
allele count: 1
allele frequency: 2.326014142165985e-5
allele num: 42992
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.325+47A>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.325+47A>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.399+47A>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.325+47A>G
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12900
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5793
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5829
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1747
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ

X-15529692-AAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015529692
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015529690
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 40855
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.399+56_399+57delAG
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.325+56_325+57delAG
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.325+56_325+57delAG
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.325+56_325+57delAG
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5704
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6070
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8618
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: AAG
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

X-15534195-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534195
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534195
    reference: chr 0
allele count: 4
allele frequency: 4.607870242373975e-5
allele num: 86808
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.326-40C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.326-40C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.326-40C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.400-40C>T
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

X-15534196-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534196
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534196
    reference: chr 0
allele count: 5
allele frequency: 5.75691981762078e-5
allele num: 86852
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.326-39G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.326-39G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.326-39G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.400-39G>A
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD

X-15534200-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534200
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534200
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 86860
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.326-35G>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.400-35G>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.326-35G>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.326-35G>T
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

X-15534203-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534203
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534203
    reference: chr 0
allele count: 1
allele frequency: 1.150562625123686e-5
allele num: 86914
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.326-32A>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.326-32A>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.326-32A>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.400-32A>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

X-15534205-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534205
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534205
    reference: chr 0
allele count: 2
allele frequency: 2.301257637298784e-5
allele num: 86909
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.400-30C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.326-30C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.326-30C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.326-30C>T
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14027
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 46299
  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 754
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

X-15534206-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534206
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534206
    reference: chr 0
allele count: 2
allele frequency: 2.300384164155414e-5
allele num: 86942
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.400-29G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.326-29G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.326-29G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.326-29G>A
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4773
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14027
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 989
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

X-15534208-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534208
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534206
    reference: chr 0
allele count: 2
allele frequency: 2.299114840786297e-5
allele num: 86990
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.326-26_326-25delTT
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.326-26_326-25delTT
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.326-26_326-25delTT
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.400-26_400-25delTT
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4771
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14028
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  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 138
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: CTT
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

X-15534224-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534224
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534224
    reference: chr 0
allele count: 1
allele frequency: 1.146328881756176e-5
allele num: 87235
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.400-11C>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.326-11C>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.326-11C>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.326-11C>G
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14028
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3700
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1289
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-15534237-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534237
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534237
    reference: chr 0
allele count: 1
allele frequency: 1.143628275065473e-5
allele num: 87441
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.328A>G
  hgvsp: ENSP00000350224.2:p.Ile110Val
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.328A>G
  hgvsp: ENSP00000308774.6:p.Ile110Val
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.402A>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.328A>G
  hgvsp: ENSP00000340082.6:p.Ile110Val
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3701
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
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genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14028
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 4530
  bin: 5.25e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile110Val
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS

X-15534240-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534240
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534240
    reference: chr 0
allele count: 3
allele frequency: 3.429316080063099e-5
allele num: 87481
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.405A>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.331A>C
  hgvsp: ENST00000348343.6:c.331A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.331A>C
  hgvsp: ENST00000357607.2:c.331A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.331A>C
  hgvsp: ENST00000342014.6:c.331A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4400
  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 195
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1912
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genotype depth: GenotypeDepth
  all individuals: 37
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5972
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 52
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genotype quality: GenotypeQuality
  all individuals: 20
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  variant carriers: 0
hgvs: p.Arg111Arg
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

X-15534243-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534243
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534243
    reference: chr 0
allele count: 1
allele frequency: 1.142870204230906e-5
allele num: 87499
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.334G>A
  hgvsp: ENSP00000340082.6:p.Gly112Ser
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.334G>A
  hgvsp: ENSP00000350224.2:p.Gly112Ser
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.334G>A
  hgvsp: ENSP00000308774.6:p.Gly112Ser
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.408G>A
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4531
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14028
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1537
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
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  variant carriers: 0
hgvs: p.Gly112Ser
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

X-15534245-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534245
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534245
    reference: chr 0
allele count: 7
allele frequency: 7.999817147036639e-5
allele num: 87502
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.336T>C
  hgvsp: ENST00000357607.2:c.336T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.336T>C
  hgvsp: ENST00000348343.6:c.336T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.336T>C
  hgvsp: ENST00000342014.6:c.336T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.410T>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2920
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genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3551
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1300
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genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly112Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

X-15534252-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534252
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534252
    reference: chr 0
allele count: 1
allele frequency: 1.142060963214216e-5
allele num: 87561
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.417C>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.343C>A
  hgvsp: ENSP00000350224.2:p.His115Asn
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.343C>A
  hgvsp: ENSP00000308774.6:p.His115Asn
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.343C>A
  hgvsp: ENSP00000340082.6:p.His115Asn
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 142
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genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 46301
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His115Asn
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

X-15534252-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534252
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534252
    reference: chr 0
allele count: 2
allele frequency: 2.284121926428433e-5
allele num: 87561
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.417C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.343C>T
  hgvsp: ENSP00000340082.6:p.His115Tyr
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.343C>T
  hgvsp: ENSP00000308774.6:p.His115Tyr
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.343C>T
  hgvsp: ENSP00000350224.2:p.His115Tyr
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4404
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 17
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genotype quality: GenotypeQuality
  all individuals: 142
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 46301
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genotype quality: GenotypeQuality
  all individuals: 1537
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  variant carriers: 0
hgvs: p.His115Tyr
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

X-15534272-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534272
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534272
    reference: chr 0
allele count: 1
allele frequency: 1.141317994019494e-5
allele num: 87618
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.363T>C
  hgvsp: ENST00000342014.6:c.363T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.437T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.363T>C
  hgvsp: ENST00000348343.6:c.363T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.363T>C
  hgvsp: ENST00000357607.2:c.363T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
  all individuals: 75
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14028
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
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genotype quality: GenotypeQuality
  all individuals: 12
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 826
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
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  variant carriers: 0
hgvs: p.His121His
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

X-15534272-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534272
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534271
    reference: chr 0
allele count: 1
allele frequency: 1.141317994019494e-5
allele num: 87618
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.364delA
  hgvsp: ENSP00000350224.2:p.Ser122ValfsTer50
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.364delA
  hgvsp: ENSP00000340082.6:p.Ser122ValfsTer50
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.438delA
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.364delA
  hgvsp: ENSP00000308774.6:p.Ser122ValfsTer50
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4403
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14028
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1003
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 87
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genotype quality: GenotypeQuality
  all individuals: 10
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser122ValfsTer50
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: TA
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ

X-15534285-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534285
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534285
    reference: chr 0
allele count: 2
allele frequency: 2.282297360523103e-5
allele num: 87631
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.450G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.376G>A
  hgvsp: ENSP00000308774.6:p.Val126Met
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.376G>A
  hgvsp: ENSP00000350224.2:p.Val126Met
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.376G>A
  hgvsp: ENSP00000340082.6:p.Val126Met
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14026
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1003
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1798
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46307
  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val126Met
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

X-15534290-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534290
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534290
    reference: chr 0
allele count: 4
allele frequency: 4.564386375306669e-5
allele num: 87635
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.455C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.381C>T
  hgvsp: ENST00000348343.6:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.381C>T
  hgvsp: ENST00000357607.2:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.381C>T
  hgvsp: ENST00000342014.6:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 34
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 5.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1981
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3710
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
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genotype depth: GenotypeDepth
  all individuals: 14026
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 10
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genotype quality: GenotypeQuality
  all individuals: 831
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1798
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 10
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genotype quality: GenotypeQuality
  all individuals: 1563
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genotype quality: GenotypeQuality
  all individuals: 8
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genotype quality: GenotypeQuality
  all individuals: 15
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  variant carriers: 0
hgvs: p.Asp127Asp
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

X-15534291-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534291
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534291
    reference: chr 0
allele count: 1
allele frequency: 1.14105753212077e-5
allele num: 87638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.456G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.382G>A
  hgvsp: ENSP00000340082.6:p.Gly128Arg
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.382G>A
  hgvsp: ENSP00000308774.6:p.Gly128Arg
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.382G>A
  hgvsp: ENSP00000350224.2:p.Gly128Arg
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4771
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 14
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
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  variant carriers: 0
hgvs: p.Gly128Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-15534301-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534301
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534301
    reference: chr 0
allele count: 1
allele frequency: 1.141031492469192e-5
allele num: 87640
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.392T>G
  hgvsp: ENSP00000308774.6:p.Leu131Arg
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.392T>G
  hgvsp: ENSP00000340082.6:p.Leu131Arg
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.466T>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.392T>G
  hgvsp: ENSP00000350224.2:p.Leu131Arg
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2999
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4403
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu131Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

X-15534311-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534311
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534311
    reference: chr 0
allele count: 1
allele frequency: 1.141031492469192e-5
allele num: 87640
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.476G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.402G>A
  hgvsp: ENST00000357607.2:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.402G>A
  hgvsp: ENST00000348343.6:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.402G>A
  hgvsp: ENST00000342014.6:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4311
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14024
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gln134Gln
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

X-15534342-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534342
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534342
    reference: chr 0
allele count: 1
allele frequency: 1.141682840506907e-5
allele num: 87590
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.507C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.433C>T
  hgvsp: ENSP00000340082.6:p.Leu145Phe
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.433C>T
  hgvsp: ENSP00000308774.6:p.Leu145Phe
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.433C>T
  hgvsp: ENSP00000350224.2:p.Leu145Phe
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2084
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu145Phe
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS

X-15534362-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534362
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534362
    reference: chr 0
allele count: 1
allele frequency: 1.143066160669379e-5
allele num: 87484
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.445+8G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.445+8G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.519+8G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
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  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.445+8G>A
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.445+8G>A
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

X-15534373-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534373
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534373
    reference: chr 0
allele count: 1
allele frequency: 1.143719834389368e-5
allele num: 87434
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.445+19G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.445+19G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.445+19G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.519+19G>A
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ

X-15534384-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534384
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534384
    reference: chr 0
allele count: 1
allele frequency: 1.145081873353945e-5
allele num: 87330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.445+30C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.519+30C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.445+30C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.445+30C>T
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ

X-15534385-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534385
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534385
    reference: chr 0
allele count: 3
allele frequency: 3.434970287507013e-5
allele num: 87337
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.445+31G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.445+31G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.519+31G>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.445+31G>A
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 616
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ

X-15534386-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534386
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534386
    reference: chr 0
allele count: 3
allele frequency: 3.434655675768504e-5
allele num: 87345
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.519+32T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.445+32T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.445+32T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.445+32T>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14025
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genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 1913
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

X-15534393-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534393
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534393
    reference: chr 0
allele count: 2
allele frequency: 2.291239445978302e-5
allele num: 87289
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.519+39G>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.445+39G>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.445+39G>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.445+39G>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4767
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1786
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  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

X-15534394-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534394
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534394
    reference: chr 0
allele count: 7
allele frequency: 8.023658329703583e-5
allele num: 87242
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.445+40A>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.445+40A>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.519+40A>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.445+40A>T
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1537
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

X-15534404-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015534404
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015534404
    reference: chr 0
allele count: 1
allele frequency: 1.147697145677199e-5
allele num: 87131
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.445+50A>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.519+50A>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.445+50A>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.445+50A>G
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

X-15536005-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536005
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536005
    reference: chr 0
allele count: 234
allele frequency: 2.822133243282358e-3
allele num: 82916
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.446-47T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.446-47T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.520-47T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.446-47T>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 557
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  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 16
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 10
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 2008
  bin: 8.25e1
  variant carriers: 3
num of homozygotes: 2
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD

X-15536008-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536008
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536008
    reference: chr 0
allele count: 2
allele frequency: 2.40955146199535e-5
allele num: 83003
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.446-44T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.446-44T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.446-44T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.520-44T>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3933
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

X-15536011-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536011
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536011
    reference: chr 0
allele count: 1
allele frequency: 1.206010757615958e-5
allele num: 82918
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.520-41G>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.446-41G>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.446-41G>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.446-41G>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3741
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

X-15536036-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536036
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536036
    reference: chr 0
allele count: 1
allele frequency: 1.176913661613784e-5
allele num: 84968
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.446-16T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.446-16T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.446-16T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.520-16T>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 832
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6588
  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2409
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

X-15536040-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536040
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536040
    reference: chr 0
allele count: 1
allele frequency: 1.171028748755782e-5
allele num: 85395
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.520-12T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.446-12T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.446-12T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.446-12T>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35056
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2170
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1986
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 165
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

X-15536052-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536052
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536052
    reference: chr 0
allele count: 1
allele frequency: 1.156671100572552e-5
allele num: 86455
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.446A>T
  hgvsp: ENSP00000340082.6:p.Tyr149Phe
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.520A>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.446A>T
  hgvsp: ENSP00000350224.2:p.Tyr149Phe
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.446A>T
  hgvsp: ENSP00000308774.6:p.Tyr149Phe
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1731
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genotype quality: GenotypeQuality
  all individuals: 9
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  variant carriers: 0
hgvs: p.Tyr149Phe
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

X-15536070-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536070
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536070
    reference: chr 0
allele count: 2
allele frequency: 2.298903423067197e-5
allele num: 86998
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.538C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.464C>T
  hgvsp: ENSP00000350224.2:p.Ala155Val
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.464C>T
  hgvsp: ENSP00000308774.6:p.Ala155Val
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.464C>T
  hgvsp: ENSP00000340082.6:p.Ala155Val
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13724
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
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  variant carriers: 0
hgvs: p.Ala155Val
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

X-15536077-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536077
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536077
    reference: chr 0
allele count: 1
allele frequency: 1.14842206807846e-5
allele num: 87076
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.471T>C
  hgvsp: ENST00000357607.2:c.471T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.471T>C
  hgvsp: ENST00000342014.6:c.471T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.471T>C
  hgvsp: ENST00000348343.6:c.471T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102010
  ensembl transcript: ENST00000463891
  gene symbol: BMX
  hgvsc: ENST00000463891.1:n.545T>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asn157Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-15536111-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536111
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536111
    reference: chr 0
allele count: 5
allele frequency: 5.771339527904427e-5
allele num: 86635
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.505A>G
  hgvsp: ENSP00000340082.6:p.Arg169Gly
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.505A>G
  hgvsp: ENSP00000350224.2:p.Arg169Gly
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.505A>G
  hgvsp: ENSP00000308774.6:p.Arg169Gly
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1966
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  variant carriers: 1
hgvs: p.Arg169Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

X-15536115-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536115
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536115
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 86455
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.509T>C
  hgvsp: ENSP00000340082.6:p.Val170Ala
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.509T>C
  hgvsp: ENSP00000350224.2:p.Val170Ala
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.509T>C
  hgvsp: ENSP00000308774.6:p.Val170Ala
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Val170Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

X-15536146-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536146
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536146
    reference: chr 0
allele count: 2
allele frequency: 2.376962479647259e-5
allele num: 84141
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.510+30T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.510+30T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.510+30T>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

X-15536147-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536147
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536147
    reference: chr 0
allele count: 3
allele frequency: 3.572449271220349e-5
allele num: 83976
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.510+31G>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
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  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.510+31G>T
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum

X-15536153-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536153
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536153
    reference: chr 0
allele count: 4
allele frequency: 4.794093676590441e-5
allele num: 83436
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.510+37G>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.510+37G>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.510+37G>T
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
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X-15536156-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536156
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536156
    reference: chr 0
allele count: 10
allele frequency: 1.203268076094673e-4
allele num: 83107
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.510+40A>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.510+40A>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
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  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.510+40A>T
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-15536159-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536159
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536159
    reference: chr 0
allele count: 2
allele frequency: 2.411992426343781e-5
allele num: 82919
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.510+43T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.510+43T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.510+43T>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 553
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

X-15536159-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536159
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536159
    reference: chr 0
allele count: 1
allele frequency: 1.205996213171891e-5
allele num: 82919
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.510+43T>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.510+43T>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.510+43T>G
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
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site quality: MQRankSum
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X-15536167-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015536167
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015536167
    reference: chr 0
allele count: 2
allele frequency: 2.443434491521282e-5
allele num: 81852
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.510+51A>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.510+51A>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.510+51A>G
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
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site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
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X-15540421-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540421
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540421
    reference: chr 0
allele count: 3
allele frequency: 3.539196602371262e-5
allele num: 84765
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.511-48T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.511-48T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000102010
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  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.511-48T>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
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site quality: MQRankSum
site quality: QD
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site quality: MQ
site quality: VQSLOD
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X-15540421-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540421
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540421
    reference: chr 0
allele count: 1
allele frequency: 1.179732200790421e-5
allele num: 84765
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.511-48T>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.511-48T>G
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.511-48T>G
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: QD
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site quality: ReadPosRankSum
site quality: DP
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X-15540434-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540434
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540434
    reference: chr 0
allele count: 1
allele frequency: 1.177481837342659e-5
allele num: 84927
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.511-35C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.511-35C>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.511-35C>T
  variant of: http://identifiers.org/hgnc/1079
canonical: true
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genotype depth: GenotypeDepth
  all individuals: 2548
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

X-15540439-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540439
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540439
    reference: chr 0
allele count: 1
allele frequency: 1.175336733974284e-5
allele num: 85082
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.511-30T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.511-30T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.511-30T>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

X-15540446-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540446
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540446
    reference: chr 0
allele count: 1
allele frequency: 1.171824648159649e-5
allele num: 85337
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.511-23T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.511-23T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.511-23T>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

X-15540449-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540449
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540449
    reference: chr 0
allele count: 1
allele frequency: 1.169877981726506e-5
allele num: 85479
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.511-20A>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.511-20A>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.511-20A>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

X-15540453-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540453
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540453
    reference: chr 0
allele count: 3615
allele frequency: 4.216087610650432e-2
allele num: 85743
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.511-16T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.511-16T>C
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.511-16T>C
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1849
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  variant carriers: 12
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 2197
  bin: 9.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 17918
  bin: 6.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 3.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 3539
  bin: 7.75e1
  variant carriers: 12
num of homozygotes: 374
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD

X-15540457-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540457
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540457
    reference: chr 0
allele count: 2
allele frequency: 2.326014142165985e-5
allele num: 85984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.511-12T>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.511-12T>A
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.511-12T>A
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5750
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3722
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19343
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2554
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6164
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1426
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

X-15540461-C-CTCCAAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540461
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540467
    reference: chr 0
allele count: 1
allele frequency: 1.158574027087461e-5
allele num: 86313
alternate allele: CTCCAAA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.511-7_511-2dupTCCAAA
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.511-7_511-2dupTCCAAA
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.511-7_511-2dupTCCAAA
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6426
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13945
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19560
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2997
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
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genotype quality: GenotypeQuality
  all individuals: 2553
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1423
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3723
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
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genotype quality: GenotypeQuality
  all individuals: 1412
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19344
  bin: 9.75e1
  variant carriers: 1
hgvs: c.511-7_511-2dupTCCAAA
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-15540466-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540466
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540466
    reference: chr 0
allele count: 2
allele frequency: 2.304492608339959e-5
allele num: 86787
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.511-3A>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.511-3A>T
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.511-3A>T
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4363
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9595
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6978
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2558
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3734
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19344
  bin: 9.75e1
  variant carriers: 2
hgvs: c.511-3A>T
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

X-15540469-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540469
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540469
    reference: chr 0
allele count: 1
allele frequency: 1.150430260917583e-5
allele num: 86924
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.511C>T
  hgvsp: ENST00000342014.6:c.511C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.511C>T
  hgvsp: ENST00000357607.2:c.511C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.511C>T
  hgvsp: ENST00000348343.6:c.511C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4363
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19343
  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2553
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2330
  bin: 9.25e1
  variant carriers: 0
hgvs: c.511C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS

X-15540488-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540488
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540488
    reference: chr 0
allele count: 2
allele frequency: 2.283496032425644e-5
allele num: 87585
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.530T>C
  hgvsp: ENSP00000340082.6:p.Val177Ala
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.530T>C
  hgvsp: ENSP00000350224.2:p.Val177Ala
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.530T>C
  hgvsp: ENSP00000308774.6:p.Val177Ala
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1426
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hgvs: p.Val177Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

X-15540500-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540500
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540500
    reference: chr 0
allele count: 2
allele frequency: 2.281047913411421e-5
allele num: 87679
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.542A>G
  hgvsp: ENSP00000340082.6:p.Lys181Arg
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.542A>G
  hgvsp: ENSP00000308774.6:p.Lys181Arg
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.542A>G
  hgvsp: ENSP00000350224.2:p.Lys181Arg
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Lys181Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

X-15540507-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540507
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540507
    reference: chr 0
allele count: 25
allele frequency: 2.850659642641307e-4
allele num: 87699
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.549T>A
  hgvsp: ENSP00000308774.6:p.Asp183Glu
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.549T>A
  hgvsp: ENSP00000340082.6:p.Asp183Glu
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.549T>A
  hgvsp: ENSP00000350224.2:p.Asp183Glu
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14739
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asp183Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

X-15540514-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540514
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540514
    reference: chr 0
allele count: 1
allele frequency: 1.14009485589201e-5
allele num: 87712
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.556T>A
  hgvsp: ENSP00000340082.6:p.Ser186Thr
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.556T>A
  hgvsp: ENSP00000308774.6:p.Ser186Thr
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.556T>A
  hgvsp: ENSP00000350224.2:p.Ser186Thr
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 586
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ser186Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ

X-15540515-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540515
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540515
    reference: chr 0
allele count: 1
allele frequency: 1.140081857877396e-5
allele num: 87713
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.557C>T
  hgvsp: ENSP00000308774.6:p.Ser186Phe
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.557C>T
  hgvsp: ENSP00000350224.2:p.Ser186Phe
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.557C>T
  hgvsp: ENSP00000340082.6:p.Ser186Phe
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3865
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9703
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 6.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 5749
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21756
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6378
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser186Phe
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

X-15540517-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540517
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540517
    reference: chr 0
allele count: 10
allele frequency: 1.140068860159154e-4
allele num: 87714
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.559T>C
  hgvsp: ENSP00000350224.2:p.Ser187Pro
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.559T>C
  hgvsp: ENSP00000340082.6:p.Ser187Pro
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.559T>C
  hgvsp: ENSP00000308774.6:p.Ser187Pro
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2725
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21778
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  variant carriers: 0
hgvs: p.Ser187Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS

X-15540534-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540534
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540534
    reference: chr 0
allele count: 1
allele frequency: 1.140211851361983e-5
allele num: 87703
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.576C>G
  hgvsp: ENST00000342014.6:c.576C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.576C>G
  hgvsp: ENST00000348343.6:c.576C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.576C>G
  hgvsp: ENST00000357607.2:c.576C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
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genotype depth: GenotypeDepth
  all individuals: 2726
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ala192Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

X-15540546-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540546
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540546
    reference: chr 0
allele count: 3
allele frequency: 3.420830577664257e-5
allele num: 87698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.588C>T
  hgvsp: ENST00000348343.6:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.588C>T
  hgvsp: ENST00000357607.2:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.588C>T
  hgvsp: ENST00000342014.6:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3866
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
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  variant carriers: 0
hgvs: p.Asn196Asn
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ

X-15540547-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540547
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540547
    reference: chr 0
allele count: 2
allele frequency: 2.280761774432661e-5
allele num: 87690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.589G>A
  hgvsp: ENSP00000340082.6:p.Glu197Lys
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.589G>A
  hgvsp: ENSP00000308774.6:p.Glu197Lys
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.589G>A
  hgvsp: ENSP00000350224.2:p.Glu197Lys
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2725
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
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genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 2988
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1422
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 2566
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2330
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21786
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19317
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Glu197Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS

X-15540565-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540565
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540565
    reference: chr 0
allele count: 3
allele frequency: 3.421493824203647e-5
allele num: 87681
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.607G>A
  hgvsp: ENSP00000350224.2:p.Gly203Ser
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.607G>A
  hgvsp: ENSP00000308774.6:p.Gly203Ser
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.607G>A
  hgvsp: ENSP00000340082.6:p.Gly203Ser
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2989
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6372
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly203Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

X-15540585-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540585
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540585
    reference: chr 0
allele count: 1
allele frequency: 1.140523956705711e-5
allele num: 87679
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.627A>G
  hgvsp: ENST00000342014.6:c.627A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.627A>G
  hgvsp: ENST00000357607.2:c.627A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.627A>G
  hgvsp: ENST00000348343.6:c.627A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 14821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5727
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1229
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 8
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser209Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff

X-15540592-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540592
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540592
    reference: chr 0
allele count: 7
allele frequency: 7.984305137330049e-5
allele num: 87672
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.634A>C
  hgvsp: ENSP00000350224.2:p.Ser212Arg
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.634A>C
  hgvsp: ENSP00000340082.6:p.Ser212Arg
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.634A>C
  hgvsp: ENSP00000308774.6:p.Ser212Arg
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2326
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genotype quality: GenotypeQuality
  all individuals: 2984
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 6368
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3706
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19307
  bin: 9.75e1
  variant carriers: 7
hgvs: p.Ser212Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ

X-15540593-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540593
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540593
    reference: chr 0
allele count: 8
allele frequency: 9.127418765972983e-5
allele num: 87648
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.635G>C
  hgvsp: ENSP00000308774.6:p.Ser212Thr
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.635G>C
  hgvsp: ENSP00000340082.6:p.Ser212Thr
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.635G>C
  hgvsp: ENSP00000350224.2:p.Ser212Thr
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9673
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4344
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2326
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2556
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3707
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19298
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2983
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6360
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21795
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser212Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

X-15540598-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24015540598
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24015540598
    reference: chr 0
allele count: 17
allele frequency: 1.939377345790981e-4
allele num: 87657
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000350224
  ensembl transcript: ENST00000357607
  gene symbol: BMX
  hgvsc: ENST00000357607.2:c.640G>A
  hgvsp: ENSP00000350224.2:p.Ala214Thr
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000308774
  ensembl transcript: ENST00000348343
  gene symbol: BMX
  hgvsc: ENST00000348343.6:c.640G>A
  hgvsp: ENSP00000308774.6:p.Ala214Thr
  variant of: http://identifiers.org/hgnc/1079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102010
  ensembl protein: ENSP00000340082
  ensembl transcript: ENST00000342014
  gene symbol: BMX
  hgvsc: ENST00000342014.6:c.640G>A
  hgvsp: ENSP00000340082.6:p.Ala214Thr
  variant of: http://identifiers.org/hgnc/1079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7724
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5730
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4348
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9669
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3708
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6358
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21802
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2558
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2983
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala214Thr
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 241
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5353
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2259
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5933
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4875
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 2.733485193621868e-4
allele num: 21950
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3589
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.62694e5

MQRankSum
type: SiteQuality
SIO_000300: -2.36e-1

FS
type: SiteQuality
SIO_000300: 8.090000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

QD
type: SiteQuality
SIO_000300: 1.297e1

GenotypeQuality
all individuals: 4151
bin: 3.25e1
variant carriers: 137

GenotypeQuality
all individuals: 254
bin: 8.25e1
variant carriers: 40

GenotypeQuality
all individuals: 847
bin: 4.25e1
variant carriers: 46

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2201
num of homozygotes: 0

Latino
type: Population
allele count: 97
allele frequency: 2.033116747013205e-2
allele num: 4771
num of homozygotes: 1

African
type: Population
allele count: 1781
allele frequency: 3.325863678804855e-1
allele num: 5355
num of homozygotes: 244

Other
type: Population
allele count: 5
allele frequency: 1.552795031055901e-2
allele num: 322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 37
allele frequency: 1.713597628751389e-3
allele num: 21592
num of homozygotes: 0

South Asian
type: Population
allele count: 409
allele frequency: 7.025077293026451e-2
allele num: 5822
num of homozygotes: 8

East Asian
type: Population
allele count: 6
allele frequency: 1.692524682651622e-3
allele num: 3545
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.395e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

DP
type: SiteQuality
SIO_000300: 7.60005e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.621e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.072e1

QD
type: SiteQuality
SIO_000300: 2.094e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 2264
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 2.122241086587436e-4
allele num: 4712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3489
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2177
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.81e-2

DP
type: SiteQuality
SIO_000300: 7.48256e5

BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.835e0

QD
type: SiteQuality
SIO_000300: 1.947e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10931
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5613
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4903
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2085
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3300
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4386
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.221e0

MQ
type: SiteQuality
SIO_000300: 6.134e1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.663e1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.71e-2

DP
type: SiteQuality
SIO_000300: 7.43626e5

GenotypeQuality
all individuals: 984
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46300
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1506
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9693
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.212878955521133e-4
allele num: 4519
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9199
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6601
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.290758875212313e-5
allele num: 47689
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.284e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.17e-2

QD
type: SiteQuality
SIO_000300: 1.448e1

VQSLOD
type: SiteQuality
SIO_000300: -3.84e-2

FS
type: SiteQuality
SIO_000300: 4.662e0

MQRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.74e-1

DP
type: SiteQuality
SIO_000300: 4.129919e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.79e-1

GenotypeQuality
all individuals: 988
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.056766762649116e-4
allele num: 9724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.096480010063104e-5
allele num: 47699
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.173913043478261e-4
allele num: 9200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8481
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.8e-1

DP
type: SiteQuality
SIO_000300: 4.131166e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.21e-2

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.893e1

VQSLOD
type: SiteQuality
SIO_000300: -8.77e-2

GenotypeQuality
all individuals: 46297
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1793
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9735
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6603
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.134488e6

FS
type: SiteQuality
SIO_000300: 9.9e0

QD
type: SiteQuality
SIO_000300: 2.945e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.945e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.02e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.93e-1

GenotypeQuality
all individuals: 1794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1505
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1367
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9199
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.023855841097574e-4
allele num: 9767
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8483
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47719
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6601
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.13758e6

QD
type: SiteQuality
SIO_000300: 3.104e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-2

GenotypeQuality
all individuals: 992
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1795
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 167
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.024485196188915e-4
allele num: 9761
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9199
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.095733087433984e-5
allele num: 47716
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.13e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.637e0

QD
type: SiteQuality
SIO_000300: 2.72e1

FS
type: SiteQuality
SIO_000300: 6.905e0

VQSLOD
type: SiteQuality
SIO_000300: -2.019e0

MQRankSum
type: SiteQuality
SIO_000300: 6.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

DP
type: SiteQuality
SIO_000300: 4.139804e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1271
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4095
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47719
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9200
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6607
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.357378595002357e-4
allele num: 8484
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.058e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.33e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.67e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.008e-1

DP
type: SiteQuality
SIO_000300: 4.14098e6

QD
type: SiteQuality
SIO_000300: 1.61e1

GenotypeQuality
all individuals: 1794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4255
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.357378595002357e-4
allele num: 8484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47741
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.4383e1

VQSLOD
type: SiteQuality
SIO_000300: -5.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.94e-1

MQ
type: SiteQuality
SIO_000300: 6.015e1

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

DP
type: SiteQuality
SIO_000300: 4.142603e6

QD
type: SiteQuality
SIO_000300: 1.54e1

GenotypeQuality
all individuals: 1531
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46300
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1472
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.09183139838929e-5
allele num: 47805
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9964
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8493
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.71e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.909999999999999e-1

DP
type: SiteQuality
SIO_000300: 4.15568e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.813e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.042e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.34e-1

GenotypeQuality
all individuals: 5880
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8503
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9220
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10073
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6623
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.089209234304815e-5
allele num: 47865
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

VQSLOD
type: SiteQuality
SIO_000300: -2.849e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 4.163341e6

QD
type: SiteQuality
SIO_000300: 3.208e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.91e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

FS
type: SiteQuality
SIO_000300: 4.573e0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 999
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variant carriers: 0

GenotypeQuality
all individuals: 46301
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.527618472683369e-4
allele num: 6626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.121e0

DP
type: SiteQuality
SIO_000300: 4.164441e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.39e-1

FS
type: SiteQuality
SIO_000300: 2.552e0

MQRankSum
type: SiteQuality
SIO_000300: -4.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.85e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

QD
type: SiteQuality
SIO_000300: 1.807e1

GenotypeQuality
all individuals: 1000
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46303
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6010
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.908838684106223e-5
allele num: 10092
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9220
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6627
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47895
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.18e-2

MQ
type: SiteQuality
SIO_000300: 5.939e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.164962e6

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

QD
type: SiteQuality
SIO_000300: 2.86e1

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46302
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 7
allele frequency: 8.229485069362803e-4
allele num: 8506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6625
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47895
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10095
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

MQRankSum
type: SiteQuality
SIO_000300: -1.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.849e-1

DP
type: SiteQuality
SIO_000300: 4.165666e6

VQSLOD
type: SiteQuality
SIO_000300: 5.28e0

QD
type: SiteQuality
SIO_000300: 2.249e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1537
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6629
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9229
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.086506562063138e-5
allele num: 47927
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 4.167156e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.98e-2

FS
type: SiteQuality
SIO_000300: 3.351e0

QD
type: SiteQuality
SIO_000300: 1.797e1

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.428e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 1546
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9229
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.350452462098954e-4
allele num: 8509
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47927
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6629
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.98e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.351e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.428e0

QD
type: SiteQuality
SIO_000300: 1.797e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.174674027957242e-4
allele num: 8513
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47961
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.09e1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.39e-2

QD
type: SiteQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6162
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47961
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.881422924901186e-5
allele num: 10120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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DP
type: SiteQuality
SIO_000300: 4.168669e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.39e-2

QD
type: SiteQuality
SIO_000300: 2.344e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.09e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.083071591032167e-4
allele num: 9233
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47965
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.879470460383324e-5
allele num: 10122
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.18e-1

DP
type: SiteQuality
SIO_000300: 4.169083e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

FS
type: SiteQuality
SIO_000300: 2.485e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

MQRankSum
type: SiteQuality
SIO_000300: -7.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.01e-1

QD
type: SiteQuality
SIO_000300: 1.358e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.522158577027434e-4
allele num: 6634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.879470460383324e-5
allele num: 10122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9233
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47968
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.169238e6

VQSLOD
type: SiteQuality
SIO_000300: 3.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.28e-1

FS
type: SiteQuality
SIO_000300: 2.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.808e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
SIO_000300: 1.86e1

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1564
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.08467968896579e-5
allele num: 47969
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10123
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.169039e6

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

MQRankSum
type: SiteQuality
SIO_000300: 7.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 1.275e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 2.744e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.62e-1

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 831
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variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084636230977694e-5
allele num: 47970
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9235
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10123
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8517
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.094e0

VQSLOD
type: SiteQuality
SIO_000300: 6.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.25e-1

QD
type: SiteQuality
SIO_000300: 1.548e1

MQ
type: SiteQuality
SIO_000300: 5.981e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 4.169206e6

GenotypeQuality
all individuals: 834
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1318
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variant carriers: 0

GenotypeQuality
all individuals: 1799
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1545
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084766610377968e-5
allele num: 47967
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8517
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9238
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.196e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.9e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.19e-1

FS
type: SiteQuality
SIO_000300: 6.706e0

DP
type: SiteQuality
SIO_000300: 4.169191e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46304
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1542
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.085592725452574e-5
allele num: 47948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10102
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8517
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

QD
type: SiteQuality
SIO_000300: 7.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.505e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: -9.341e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.467e0

DP
type: SiteQuality
SIO_000300: 4.167169e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

FS
type: SiteQuality
SIO_000300: 3.416e0

GenotypeQuality
all individuals: 5432
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1797
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1507
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47911
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.507613447911955e-4
allele num: 6633
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10035
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.853e0

MQRankSum
type: SiteQuality
SIO_000300: -4.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.941e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.26e1

DP
type: SiteQuality
SIO_000300: 4.161154e6

GenotypeQuality
all individuals: 1797
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.994003597841295e-5
allele num: 10006
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9229
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.027e1

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.84e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.154217e6

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8511
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.089427496865859e-5
allele num: 47860
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9949
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9222
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.046e1

VQSLOD
type: SiteQuality
SIO_000300: -7.729e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.93e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.07e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.82e-1

FS
type: SiteQuality
SIO_000300: 3.142e0

DP
type: SiteQuality
SIO_000300: 4.145854e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.89e0

MQ
type: SiteQuality
SIO_000300: 5.99e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.089209234304815e-5
allele num: 47865
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9218
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.009444388626545e-4
allele num: 9953
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.24e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.745e0

QD
type: SiteQuality
SIO_000300: 2.017e1

MQRankSum
type: SiteQuality
SIO_000300: -1.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.795e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 1.208e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.41e-1

DP
type: SiteQuality
SIO_000300: 4.145255e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46305
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 401
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9217
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9962
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.267627702914446e-5
allele num: 47865
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.78e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.87e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.93e-2

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 4.144319e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.75e-1

QD
type: SiteQuality
SIO_000300: 1.638e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1534
bin: 8.25e1
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GenotypeQuality
all individuals: 3145
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.350452462098954e-4
allele num: 8509
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47845
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9933
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6629
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.538e0

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.23e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeQuality
all individuals: 1284
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variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9215
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9904
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 3.2e-3
allele num: 625
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.350452462098954e-4
allele num: 8509
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.272082958750601e-5
allele num: 47831
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.579e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 4.138133e6

VQSLOD
type: SiteQuality
SIO_000300: -6.941000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.06e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.98e-1

QD
type: SiteQuality
SIO_000300: 1.869e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.46e0

GenotypeQuality
all individuals: 818
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 997
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9212
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6627
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.175640724194686e-4
allele num: 8506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47812
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9822
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

DP
type: SiteQuality
SIO_000300: 4.134492e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.276e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.18e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.986e1

VQSLOD
type: SiteQuality
SIO_000300: -1.107e0

GenotypeQuality
all individuals: 3778
bin: 3.25e1
variant carriers: 12

GenotypeQuality
all individuals: 1957
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1680
bin: 7.25e1
variant carriers: 2

Latino
type: Population
allele count: 2
allele frequency: 2.233888082207081e-4
allele num: 8953
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 200
allele frequency: 4.449487196600592e-3
allele num: 44949
num of homozygotes: 2

African
type: Population
allele count: 4
allele frequency: 4.866180048661801e-4
allele num: 8220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6320
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.65016501650165e-3
allele num: 606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 18
allele frequency: 4.08905043162199e-3
allele num: 4402
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 9.507711810690894e-4
allele num: 9466
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.867e1

DP
type: SiteQuality
SIO_000300: 1.597342e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.04e0

QD
type: SiteQuality
SIO_000300: 1.83e1

GenotypeQuality
all individuals: 3748
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7140
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2409
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6331
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9481
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.432794063982484e-4
allele num: 8221
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45004
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.60528e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

FS
type: SiteQuality
SIO_000300: 2.834e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.44e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.689e-1

QD
type: SiteQuality
SIO_000300: 1.922e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 7137
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1419
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 605
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8213
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6323
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.225040606991078e-5
allele num: 44943
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.274e1

MQ
type: SiteQuality
SIO_000300: 5.99e1

MQRankSum
type: SiteQuality
SIO_000300: -1.453e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.01e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.856e-1

FS
type: SiteQuality
SIO_000300: 3.092e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.7e-2

DP
type: SiteQuality
SIO_000300: 1.618249e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.44e-1

GenotypeQuality
all individuals: 213
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34028
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7139
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.158428663932657e-5
allele num: 46330
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8331
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4459
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

QD
type: SiteQuality
SIO_000300: 1.032e1

MQ
type: SiteQuality
SIO_000300: 5.955e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.81e0

DP
type: SiteQuality
SIO_000300: 1.739363e6

VQSLOD
type: SiteQuality
SIO_000300: 5.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

GenotypeQuality
all individuals: 882
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1420
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1712
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4469
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9683
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9097
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8347
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.144726118474671e-5
allele num: 46626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6555
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.752184e6

FS
type: SiteQuality
SIO_000300: 7.798e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

QD
type: SiteQuality
SIO_000300: 1.258e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

VQSLOD
type: SiteQuality
SIO_000300: -4.5e-2

GenotypeQuality
all individuals: 1204
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37523
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8420
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9150
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4483
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.112958776174277e-5
allele num: 47327
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.782802e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 3.269e1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.08e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1421
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2435
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7137
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 884
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9956
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4495
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9181
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.196831392298814e-5
allele num: 47655
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.79e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: -3.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.272e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.19e-2

DP
type: SiteQuality
SIO_000300: 1.797018e6

GenotypeQuality
all individuals: 882
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9190
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.51148730350665e-4
allele num: 6616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9969
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8473
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4499
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.798718e6

MQRankSum
type: SiteQuality
SIO_000300: -8.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.75e-1

FS
type: SiteQuality
SIO_000300: 1.509e0

QD
type: SiteQuality
SIO_000300: 1.04e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.05e-1

GenotypeQuality
all individuals: 876
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9167
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6605
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4504
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 5.119279205487867e-4
allele num: 9767
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8445
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47523
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.04e-2

MQRankSum
type: SiteQuality
SIO_000300: -6.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.116000000000001e-1

FS
type: SiteQuality
SIO_000300: 9.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.997e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

DP
type: SiteQuality
SIO_000300: 1.785526e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

QD
type: SiteQuality
SIO_000300: 1.499e1

GenotypeQuality
all individuals: 7130
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1414
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4503
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8435
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6597
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9685
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.81e-1

FS
type: SiteQuality
SIO_000300: 2.444e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.165e0

DP
type: SiteQuality
SIO_000300: 1.778186e6

QD
type: SiteQuality
SIO_000300: 1.138e1

MQ
type: SiteQuality
SIO_000300: 5.937e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

GenotypeQuality
all individuals: 8076
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8859
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.537515375153752e-4
allele num: 6504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.155869354317128e-5
allele num: 46385
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9093
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.381e1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

FS
type: SiteQuality
SIO_000300: 1.677e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.11e-1

DP
type: SiteQuality
SIO_000300: 1.613408e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.728e0

MQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1936
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 3.302873499944952e-4
allele num: 9083
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8809
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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ReadPosRankSum
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QD
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MQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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DP
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MQ
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Other
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 6.183335909723295e-4
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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DP
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BaseQRankSum
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QD
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VQSLOD
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MQRankSum
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FS
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MQ
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.178601773381843e-4
allele num: 45901
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European (Finnish)
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allele frequency: 0.0e0
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FS
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MQRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQ
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DP
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 1.104484205875856e-4
allele num: 9054
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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FS
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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QD
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InbreedingCoeff
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MQRankSum
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MQ
type: SiteQuality
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BaseQRankSum
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DP
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 45813
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.554968123153475e-4
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Other
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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MQ
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BaseQRankSum
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QD
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DP
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FS
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 8018
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4420
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Latino
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allele frequency: 0.0e0
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East Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.422234997567771e-5
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
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QD
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ClippingRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
type: SiteQuality
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DP
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MQRankSum
type: SiteQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 9304
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.24331717021012e-4
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 4.225471140032114e-5
allele num: 47332
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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BaseQRankSum
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FS
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
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ReadPosRankSum
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MQ
type: SiteQuality
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VQSLOD
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 1.24331717021012e-4
allele num: 8043
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4530
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African
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Other
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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VQSLOD
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QD
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
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BaseQRankSum
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 602
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9303
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.111397322748195e-5
allele num: 47362
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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FS
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QD
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MQ
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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MQRankSum
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VQSLOD
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BaseQRankSum
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DP
type: SiteQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.109348633142086e-5
allele num: 47408
num of homozygotes: 0

MQ
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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QD
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DP
type: SiteQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 611
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.106549261654484e-5
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African
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Latino
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South Asian
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VQSLOD
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MQ
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InbreedingCoeff
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FS
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DP
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Other
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South Asian
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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Latino
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allele frequency: 1.075037626316921e-4
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MQ
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InbreedingCoeff
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FS
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DP
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VQSLOD
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QD
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GenotypeQuality
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bin: 6.75e1
variant carriers: 16

Latino
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allele frequency: 1.666129205632592e-2
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num of homozygotes: 1

South Asian
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allele frequency: 6.98881328566486e-2
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European (Finnish)
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allele frequency: 2.207505518763797e-4
allele num: 4530
num of homozygotes: 0

African
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allele frequency: 3.299054373522459e-1
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num of homozygotes: 363

East Asian
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allele frequency: 9.053870529651426e-4
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Other
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allele frequency: 1.468189233278956e-2
allele num: 613
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 9.886619407223542e-4
allele num: 47539
num of homozygotes: 0

FS
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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DP
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VQSLOD
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GenotypeQuality
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variant carriers: 0

African
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South Asian
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Other
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East Asian
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European (Non-Finnish)
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Latino
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allele frequency: 2.148689299527288e-4
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European (Finnish)
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FS
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ClippingRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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MQ
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

South Asian
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European (Finnish)
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Latino
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 47661
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African
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FS
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VQSLOD
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MQ
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MQRankSum
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DP
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BaseQRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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Latino
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East Asian
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.188130837207354e-5
allele num: 47754
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European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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FS
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ClippingRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
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QD
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MQ
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MQRankSum
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 2.092487968194183e-5
allele num: 47790
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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African
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Other
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South Asian
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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VQSLOD
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DP
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BaseQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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MQ
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FS
type: SiteQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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South Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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allele frequency: 0.0e0
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Other
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African
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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DP
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FS
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QD
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ReadPosRankSum
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VQSLOD
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MQ
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 1.074806534823732e-4
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European (Finnish)
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East Asian
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African
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Other
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South Asian
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European (Non-Finnish)
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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DP
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MQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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African
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Latino
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European (Non-Finnish)
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allele count: 0
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South Asian
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allele frequency: 2.473288484368817e-3
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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QD
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FS
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MQ
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InbreedingCoeff
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VQSLOD
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DP
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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Latino
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allele num: 9304
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European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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FS
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MQRankSum
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DP
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ClippingRankSum
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QD
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MQ
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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allele frequency: 2.08415831266543e-5
allele num: 47981
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Other
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Latino
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European (Finnish)
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allele num: 4530
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South Asian
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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BaseQRankSum
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MQ
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FS
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DP
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ReadPosRankSum
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QD
type: SiteQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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num of homozygotes: 0

South Asian
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African
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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European (Non-Finnish)
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allele frequency: 2.084245190604223e-4
allele num: 47979
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Other
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MQRankSum
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BaseQRankSum
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QD
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DP
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InbreedingCoeff
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ReadPosRankSum
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MQ
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VQSLOD
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ClippingRankSum
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FS
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GenotypeQuality
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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Other
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South Asian
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East Asian
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MQ
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FS
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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QD
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DP
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GenotypeQuality
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variant carriers: 0

East Asian
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South Asian
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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Other
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InbreedingCoeff
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FS
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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QD
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VQSLOD
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DP
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MQ
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GenotypeQuality
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variant carriers: 0

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European (Finnish)
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African
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South Asian
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Latino
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Other
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East Asian
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VQSLOD
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MQ
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InbreedingCoeff
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DP
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QD
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FS
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GenotypeQuality
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European (Finnish)
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East Asian
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Other
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Latino
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South Asian
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African
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European (Non-Finnish)
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MQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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FS
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BaseQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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QD
type: SiteQuality
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GenotypeQuality
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Other
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European (Finnish)
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African
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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ClippingRankSum
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MQ
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MQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 6.148e0

QD
type: SiteQuality
SIO_000300: 3.462e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.16e-2

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6622
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 5.926511260371395e-4
allele num: 10124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.20799293442261e-4
allele num: 4529
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47977
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9272
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.279e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.749e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-1

QD
type: SiteQuality
SIO_000300: 2.728e1

DP
type: SiteQuality
SIO_000300: 2.441832e6

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeQuality
all individuals: 1419
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.078865033984249e-4
allele num: 9269
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.459458332464608e-4
allele num: 47963
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.441767e6

FS
type: SiteQuality
SIO_000300: 5.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: 2.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.87e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.918e-1

QD
type: SiteQuality
SIO_000300: 2.128e1