19-51380181-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380181
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380181
    reference: chr 19
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*224A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.541A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.241A>G
  hgvsp: ENSP00000375686.2:p.Met81Val
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.782A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.547A>G
  hgvsp: ENSP00000350748.3:p.Met183Val
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.547A>G
  hgvsp: ENSP00000313581.2:p.Met183Val
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.529A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*237A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.212A>G
  hgvsp: ENSP00000471725.1:p.Met72Val
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000596950
  gene symbol: KLK2
  hgvsc: ENST00000596950.1:n.513A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*423A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.689A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.550A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*237A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*39A>G
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met183Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
reference allele: A
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

19-51380182-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380182
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380182
    reference: chr 19
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*40T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.548T>C
  hgvsp: ENSP00000313581.2:p.Met183Thr
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.783T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*225T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*238T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.242T>C
  hgvsp: ENSP00000375686.2:p.Met81Thr
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.551T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.213T>C
  hgvsp: ENSP00000471725.1:p.Met72Thr
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000596950
  gene symbol: KLK2
  hgvsc: ENST00000596950.1:n.514T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.690T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*238T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.548T>C
  hgvsp: ENSP00000350748.3:p.Met183Thr
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*424T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.542T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.530T>C
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met183Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP

19-51380184-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380184
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380184
    reference: chr 19
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*426T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*240T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.244T>C
  hgvsp: ENSP00000375686.2:p.Cys82Arg
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.553T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.215T>C
  hgvsp: ENSP00000471725.1:p.Cys73Arg
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.692T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.550T>C
  hgvsp: ENSP00000350748.3:p.Cys184Arg
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*240T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.550T>C
  hgvsp: ENSP00000313581.2:p.Cys184Arg
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.544T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.532T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000596950
  gene symbol: KLK2
  hgvsc: ENST00000596950.1:n.516T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.785T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*42T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*227T>C
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Cys184Arg
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

19-51380188-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380188
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380188
    reference: chr 19
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*244C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.557C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.536C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*430C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.554C>G
  hgvsp: ENSP00000313581.2:p.Ala185Gly
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.789C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*231C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*244C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*46C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.248C>G
  hgvsp: ENSP00000375686.2:p.Ala83Gly
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.219C>G
  hgvsp: ENSP00000471725.1:p.Ala74Gly
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.554C>G
  hgvsp: ENSP00000350748.3:p.Ala185Gly
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000596950
  gene symbol: KLK2
  hgvsc: ENST00000596950.1:n.520C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.548C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.696C>G
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5376
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala185Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

19-51380189-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380189
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380189
    reference: chr 19
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.249T>C
  hgvsp: ENST00000391810.2:c.249T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.555T>C
  hgvsp: ENST00000358049.4:c.555T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*47T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.537T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*431T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*232T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*245T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.220T>C
  hgvsp: ENST00000595050.1:c.220T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.555T>C
  hgvsp: ENST00000325321.3:c.555T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.790T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.697T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.549T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000596950
  gene symbol: KLK2
  hgvsc: ENST00000596950.1:n.521T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.558T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*245T>C
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ala185Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum

19-51380207-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380207
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380207
    reference: chr 19
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*263G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*65G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.267G>T
  hgvsp: ENSP00000375686.2:p.Lys89Asn
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.573G>T
  hgvsp: ENSP00000350748.3:p.Lys191Asn
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*449G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.573G>T
  hgvsp: ENSP00000313581.2:p.Lys191Asn
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.8G>T
  hgvsp: ENSP00000471321.1:p.Lys3Asn
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.555G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*263G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.715G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.576G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*250G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.238G>T
  hgvsp: ENSP00000471725.1:p.Lys80Asn
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.808G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.567G>T
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5377
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys191Asn
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

19-51380211-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380211
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380211
    reference: chr 19
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.12A>T
  hgvsp: ENSP00000471321.1:p.Thr5Ser
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.577A>T
  hgvsp: ENSP00000350748.3:p.Thr193Ser
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*267A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.271A>T
  hgvsp: ENSP00000375686.2:p.Thr91Ser
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*453A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*267A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*254A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.719A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*69A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.580A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.577A>T
  hgvsp: ENSP00000313581.2:p.Thr193Ser
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.559A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.242A>T
  hgvsp: ENSP00000471725.1:p.Thr82Ser
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.812A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.571A>T
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr193Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum

19-51380218-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380218
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380218
    reference: chr 19
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.587T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*274T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.726T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*261T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.584T>A
  hgvsp: ENSP00000313581.2:p.Phe195Tyr
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*274T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.249T>A
  hgvsp: ENSP00000471725.1:p.Phe84Tyr
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*76T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.578T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*460T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.819T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.19T>A
  hgvsp: ENSP00000471321.1:p.Phe7Tyr
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.584T>A
  hgvsp: ENSP00000350748.3:p.Phe195Tyr
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.566T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.278T>A
  hgvsp: ENSP00000375686.2:p.Phe93Tyr
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe195Tyr
num of homozygotes: 1
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

19-51380220-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380220
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380220
    reference: chr 19
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.586A>G
  hgvsp: ENSP00000313581.2:p.Met196Val
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.821A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.586A>G
  hgvsp: ENSP00000350748.3:p.Met196Val
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.251A>G
  hgvsp: ENSP00000471725.1:p.Met85Val
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*276A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.568A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.589A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.280A>G
  hgvsp: ENSP00000375686.2:p.Met94Val
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*462A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.580A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*276A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.21A>G
  hgvsp: ENSP00000471321.1:p.Met8Val
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*78A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.728A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*263A>G
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met196Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-51380225-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380225
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380225
    reference: chr 19
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*268G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.591G>A
  hgvsp: ENST00000358049.4:c.591G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*281G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.26G>A
  hgvsp: ENST00000597911.1:c.26G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.591G>A
  hgvsp: ENST00000325321.3:c.591G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.585G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*83G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.594G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*281G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*467G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.285G>A
  hgvsp: ENST00000391810.2:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.256G>A
  hgvsp: ENST00000595050.1:c.256G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.573G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.826G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.733G>A
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu197Leu
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff

19-51380231-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380231
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380231
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.579T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*473T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.591T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*287T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*274T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.32T>C
  hgvsp: ENST00000597911.1:c.32T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.597T>C
  hgvsp: ENST00000325321.3:c.597T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.291T>C
  hgvsp: ENST00000391810.2:c.291T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.600T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*89T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.262T>C
  hgvsp: ENST00000595050.1:c.262T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.597T>C
  hgvsp: ENST00000358049.4:c.597T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*287T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.739T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.832T>C
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala199Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

19-51380237-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380237
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380237
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*293C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*293C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.603C>G
  hgvsp: ENST00000325321.3:c.603C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*95C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.603C>G
  hgvsp: ENST00000358049.4:c.603C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*280C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.38C>G
  hgvsp: ENST00000597911.1:c.38C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.297C>G
  hgvsp: ENST00000391810.2:c.297C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.268C>G
  hgvsp: ENST00000595050.1:c.268C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.585C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.597C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.838C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*479C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.606C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.745C>G
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu201Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-51380238-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380238
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380238
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.604T>C
  hgvsp: ENSP00000313581.2:p.Trp202Arg
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*480T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.604T>C
  hgvsp: ENSP00000350748.3:p.Trp202Arg
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*294T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.269T>C
  hgvsp: ENSP00000471725.1:p.Trp91Arg
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.298T>C
  hgvsp: ENSP00000375686.2:p.Trp100Arg
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.746T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*294T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.586T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*96T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.598T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.607T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.39T>C
  hgvsp: ENSP00000471321.1:p.Trp14Arg
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.839T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*281T>C
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp202Arg
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

19-51380240-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380240
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380240
    reference: chr 19
allele count: 7
allele frequency: 5.765682656826568e-5
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.606G>A
  hgvsp: ENSP00000350748.3:p.Trp202Ter
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.300G>A
  hgvsp: ENSP00000375686.2:p.Trp100Ter
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*482G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.600G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.748G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.841G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.271G>A
  hgvsp: ENSP00000471725.1:p.Trp91Ter
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*296G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*98G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.588G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*296G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.606G>A
  hgvsp: ENSP00000313581.2:p.Trp202Ter
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.609G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.41G>A
  hgvsp: ENSP00000471321.1:p.Trp14Ter
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*283G>A
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp202Ter
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-51380247-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380247
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380247
    reference: chr 19
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*303G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.616G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.278G>T
  hgvsp: ENSP00000471725.1:p.Gly94Cys
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*290G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*489G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.613G>T
  hgvsp: ENSP00000313581.2:p.Gly205Cys
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*105G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.48G>T
  hgvsp: ENSP00000471321.1:p.Gly17Cys
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.607G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.848G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.613G>T
  hgvsp: ENSP00000350748.3:p.Gly205Cys
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.755G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*303G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.595G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.307G>T
  hgvsp: ENSP00000375686.2:p.Gly103Cys
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly205Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS

19-51380264-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380264
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380264
    reference: chr 19
allele count: 3
allele frequency: 2.47161759132627e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*122G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295G>A
  hgvsp: ENST00000595050.1:c.295G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.630G>A
  hgvsp: ENST00000358049.4:c.630G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.633G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*307G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.65G>A
  hgvsp: ENST00000597911.1:c.65G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324G>A
  hgvsp: ENST00000391810.2:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.624G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*320G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630G>A
  hgvsp: ENST00000325321.3:c.630G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320G>A
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16397
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.630G>A
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

19-51380266-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380266
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380266
    reference: chr 19
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+2T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+2T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+2T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.632T>C
  hgvsp: ENSP00000350748.3:p.Val211Ala
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.626T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*309T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+2T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*322T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+2T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*124T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+2T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.635T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+2T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+2T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.65+2T>C
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.630+2T>C
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-51380275-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380275
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380275
    reference: chr 19
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+11C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.635C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+11C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+11C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*318C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*133C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.641C>T
  hgvsp: ENSP00000350748.3:p.Pro214Leu
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+11C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+11C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.644C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*331C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+11C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.65+11C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+11C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+11C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4487
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro214Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

19-51380287-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380287
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380287
    reference: chr 19
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.653A>T
  hgvsp: ENSP00000350748.3:p.His218Leu
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+23A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*343A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.656A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*145A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+23A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+23A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+23A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*330A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+23A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+23A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+23A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+23A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.65+23A>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.647A>T
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4486
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His218Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

19-51380290-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380290
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380290
    reference: chr 19
allele count: 29
allele frequency: 2.396020952790125e-4
allele num: 121034
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+26T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+26T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.656T>C
  hgvsp: ENSP00000350748.3:p.Leu219Pro
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+26T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*333T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+26T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*346T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*148T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+26T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.65+26T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+26T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.659T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.650T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+26T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+26T>C
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 7933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu219Pro
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

19-51380298-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380298
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380298
    reference: chr 19
allele count: 1
allele frequency: 8.284455048546906e-6
allele num: 120708
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+34A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*341A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.65+34A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+34A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.664A>G
  hgvsp: ENSP00000350748.3:p.Lys222Glu
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+34A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+34A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*156A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+34A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+34A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*354A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+34A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.658A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+34A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.667A>G
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7930
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys222Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/19-51380300-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380300
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380300
    reference: chr 19
allele count: 2
allele frequency: 1.659062629614268e-5
allele num: 120550
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+36A>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+36A>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+36A>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.660A>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+36A>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*158A>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+36A>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*343A>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.669A>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.666A>C
  hgvsp: ENSP00000350748.3:p.Lys222Asn
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*356A>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+36A>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+36A>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+36A>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.65+36A>C
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys222Asn
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS

http://identifiers.org/exac.variant/19-51380313-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380313
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380313
    reference: chr 19
allele count: 1
allele frequency: 8.341675008341675e-6
allele num: 119880
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*356C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.673C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+49C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+49C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+49C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+49C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+12C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+49C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*369C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.65+49C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+49C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+12C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+49C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+49C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.682C>A
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2904
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7922
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-51380324-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380324
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380324
    reference: chr 19
allele count: 1
allele frequency: 8.391514500537057e-6
allele num: 119168
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+60G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.65+60G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*367G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+60G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+23G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+60G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+60G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+60G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.684G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+60G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+23G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.693G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*380G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+60G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+60G>A
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

19-51380329-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380329
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380329
    reference: chr 19
allele count: 1
allele frequency: 8.423038695439767e-6
allele num: 118722
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+65C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+65C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+65C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.689C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+28C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+65C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*372C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*385C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+65C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+65C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+28C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.698C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.65+65C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+65C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+65C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4438
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ

19-51380331-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380331
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380331
    reference: chr 19
allele count: 1
allele frequency: 8.424457886135027e-6
allele num: 118702
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*374A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*387A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+67A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+67A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+67A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.700A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+67A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+30A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.65+67A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.691A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+67A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+30A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+67A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+67A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+67A>G
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-51380341-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380341
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380341
    reference: chr 19
allele count: 1
allele frequency: 8.487667419239845e-6
allele num: 117818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+40T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+77T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*397T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+77T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+77T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+77T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+77T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.65+77T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.710T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+77T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*384T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+77T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+77T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+40T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.701T>A
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

19-51380349-C-CATCTGCCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380349
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380357
    reference: chr 19
allele count: 4
allele frequency: 3.426241584294109e-5
allele num: 116746
alternate allele: CATCTGCCT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.710_717dupATCTGCCT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.719_726dupATCTGCCT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6505
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4465
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

19-51380349-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380349
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380349
    reference: chr 19
allele count: 1
allele frequency: 8.565603960735272e-6
allele num: 116746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+85C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+85C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*392C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*405C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.718C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+48C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.709C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.65+85C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+85C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+85C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+85C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+85C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+48C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+85C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+85C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6505
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

19-51380350-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380350
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380350
    reference: chr 19
allele count: 3
allele frequency: 2.566339886054509e-5
allele num: 116898
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+86A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.719A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*393A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.65+86A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+86A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*406A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+49A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+86A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+86A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+86A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.710A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+86A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+49A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+86A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+86A>G
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4363
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12078
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

19-51380409-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380409
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380409
    reference: chr 19
allele count: 2
allele frequency: 5.041084841457882e-5
allele num: 39674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.66-50C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+145C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*465C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+145C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+145C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.778C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+108C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+145C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.769C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*452C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+145C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+145C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+145C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+108C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+145C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15463
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

19-51380411-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380411
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380411
    reference: chr 19
allele count: 4
allele frequency: 1.023698623125352e-4
allele num: 39074
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*467T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.771T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+147T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.780T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+147T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+110T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*454T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+110T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+147T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.66-48T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+147T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+147T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+147T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+147T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+147T>C
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15291
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15930
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22508
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-51380413-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380413
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380414
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 35138
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+151dupT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.775dupT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+151dupT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.784dupT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+114dupT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+151dupT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+151dupT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+114dupT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+151dupT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*471dupT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+151dupT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*458dupT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+151dupT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.66-44dupT
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+151dupT
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-51380420-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380420
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380420
    reference: chr 19
allele count: 1
allele frequency: 3.370635027639207e-5
allele num: 29668
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+156C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.780C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+156C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+156C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+119C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+119C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*463C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+156C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+156C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*476C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+156C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+156C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+156C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.789C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.66-39C>A
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12070
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

19-51380420-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380420
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380420
    reference: chr 19
allele count: 1
allele frequency: 3.370635027639207e-5
allele num: 29668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+156C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.789C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+156C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*476C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+156C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+156C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+156C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+156C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*463C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+119C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.66-39C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+119C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.780C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+156C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+156C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12070
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22159
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

19-51380431-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380431
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380431
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 21994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+167C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+167C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.800C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*487C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+167C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+167C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+167C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*474C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+167C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.791C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+167C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.66-28C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+130C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+167C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+130C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 21374
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8831
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

19-51380439-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380439
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380439
    reference: chr 19
allele count: 1
allele frequency: 5.976571838393497e-5
allele num: 16732
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+175A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*482A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+175A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.808A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+175A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.66-20A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+175A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+175A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+138A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*495A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+138A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+175A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+175A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+175A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.799A>G
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25689
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

19-51380445-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380445
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380445
    reference: chr 19
allele count: 5251
allele frequency: 3.392557177929965e-1
allele num: 15478
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.66-14G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+181G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+181G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+181G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.814G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+181G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*501G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.805G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+144G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+181G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+181G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+181G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*488G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+144G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+181G>T
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24405
  bin: 2.5e0
  variant carriers: 1789
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 2.75e1
  variant carriers: 140
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 3.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 638
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS

19-51380459-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380459
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380459
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 5604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.66C>T
  hgvsp: ENSP00000471321.1:p.His23Tyr
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+195C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.819C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+195C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+195C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+195C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+195C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.828C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*515C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+195C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*502C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+158C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+158C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+195C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+195C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His23Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

19-51380468-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380468
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380468
    reference: chr 19
allele count: 3
allele frequency: 7.836990595611285e-4
allele num: 3828
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+204C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*524C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+204C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+167C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+204C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+204C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.828C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+204C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+204C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*511C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+167C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.837C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.75C>T
  hgvsp: ENSP00000471321.1:p.Pro26Ser
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+204C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+204C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36003
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7773
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro26Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

19-51380474-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380474
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380474
    reference: chr 19
allele count: 1
allele frequency: 3.278688524590164e-4
allele num: 3050
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+210C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+210C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*517C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.834C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+210C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+210C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+210C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471014
  ensembl transcript: ENST00000597727
  gene symbol: KLK2
  hgvsc: ENST00000597727.1:c.*530C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.81C>T
  hgvsp: ENSP00000471321.1:p.Pro28Ser
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.843C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+173C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+210C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+210C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+210C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+173C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro28Ser
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ

19-51380488-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380488
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380488
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 1826
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*531A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+224A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.95A>G
  hgvsp: ENST00000597911.1:c.95A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+224A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+224A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+224A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.848A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+224A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+187A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.857A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+224A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+224A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+224A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+187A>G
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr32Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

19-51380492-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380492
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380492
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 1564
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.99T>C
  hgvsp: ENST00000597911.1:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+228T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+228T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+191T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*535T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+228T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+228T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.861T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.852T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+191T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+228T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+228T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+228T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+228T>C
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30875
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu34Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-51380509-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380509
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380509
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 922
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.869C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+245C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+245C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+245C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.116C>A
  hgvsp: ENSP00000471321.1:p.Tyr39Ter
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+208C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+245C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+208C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000469770
  ensembl transcript: ENST00000595316
  gene symbol: KLK2
  hgvsc: ENST00000595316.1:c.*552C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+245C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+245C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+245C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.878C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+245C>A
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: stop gained
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25315
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Tyr39Ter
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

19-51380524-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380524
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380524
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 564
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.893C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+260C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+260C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.884C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+260C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.131C>T
  hgvsp: ENST00000597911.1:c.131C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+260C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+260C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+260C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+223C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+260C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+260C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+223C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20897
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala44Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

19-51380525-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380525
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380525
    reference: chr 19
allele count: 37
allele frequency: 7.034220532319392e-2
allele num: 526
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+261G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+261G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+261G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+224G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.132G>A
  hgvsp: ENSP00000471321.1:p.Val45Ile
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.894G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.885G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+261G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+261G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+261G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+261G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+261G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+224G>A
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 7.5e0
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20241
  bin: 2.5e0
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val45Ile
num of homozygotes: 3
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

19-51380544-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380544
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380544
    reference: chr 19
allele count: 8
allele frequency: 2.73972602739726e-2
allele num: 292
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+243A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+280A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+280A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+280A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+280A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.904A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+280A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+280A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.151A>G
  hgvsp: ENSP00000471321.1:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.913A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+243A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+280A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+280A>G
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 7.5e0
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17003
  bin: 2.5e0
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln51Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

19-51380550-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380550
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380550
    reference: chr 19
allele count: 2
allele frequency: 9.174311926605505e-3
allele num: 218
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000599280
  gene symbol: KLK2
  hgvsc: ENST00000599280.1:n.910C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*2C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+286C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+286C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+249C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.919C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+286C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+286C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+286C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+286C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+286C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+249C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+286C>G
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16431
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.*2C>G
num of homozygotes: 1
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-51380554-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380554
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380555
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 176
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+291dupA
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+291dupA
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.295+291dupA
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+254dupA
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000601114
  gene symbol: KLK2
  hgvsc: ENST00000601114.1:n.924dupA
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*4+3dupA
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+291dupA
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+291dupA
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+291dupA
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+254dupA
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+291dupA
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+291dupA
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16032
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.*4+3dupA
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

19-51380939-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380939
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380939
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*320+675G>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.630+675G>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.865+675G>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*506+675G>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*5-24G>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.772+675G>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.296-21G>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.324+675G>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*159+638G>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.240G>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.667+638G>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.612+675G>C
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9533
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

19-51380987-CAGA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380987
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380984
    reference: chr 19
allele count: 1
allele frequency: 4.424778761061947e-3
allele num: 226
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.294_296delAAG
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*35_*37delAAG
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.631-667_631-665delAAG
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.329_331delAAG
  hgvsp: ENSP00000471725.1:p.Lys111del
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*507-667_*507-665delAAG
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.668-667_668-665delAAG
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.325-667_325-665delAAG
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.866-667_866-665delAAG
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*321-667_*321-665delAAG
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*160-667_*160-665delAAG
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.613-667_613-665delAAG
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.773-667_773-665delAAG
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: inframe deletion
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9671
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys111del
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: CAGA
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

19-51380987-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51380987
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51380987
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*507-673C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.288C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*29C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.613-673C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.323C>T
  hgvsp: ENSP00000471725.1:p.Gln109Ter
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*321-673C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.631-673C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.866-673C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*160-673C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.773-673C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.668-673C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.325-673C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: stop gained
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9671
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln109Ter
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP

19-51381028-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51381028
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51381028
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*507-632C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.631-632C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.866-632C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.348+16C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*321-632C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.313+16C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.325-632C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*54+16C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.773-632C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.668-632C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.613-632C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*160-632C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14705
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

19-51381615-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51381615
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51381615
    reference: chr 19
allele count: 3
allele frequency: 2.569021031718846e-5
allele num: 116776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*160-45T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.314-45T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.866-45T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*321-45T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.668-45T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.325-45T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.773-45T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*55-45T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*507-45T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.349-45T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.613-45T>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.631-45T>A
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12440
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9034
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

19-51381615-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51381615
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51381615
    reference: chr 19
allele count: 3
allele frequency: 2.569021031718846e-5
allele num: 116776
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*507-45T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.668-45T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*321-45T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.631-45T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.613-45T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.314-45T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.773-45T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*55-45T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.349-45T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.325-45T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*160-45T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.866-45T>C
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9034
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD

19-51381624-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51381624
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51381624
    reference: chr 19
allele count: 7
allele frequency: 5.983928876731065e-5
allele num: 116980
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.314-36A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.773-36A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*55-36A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*160-36A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*321-36A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*507-36A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.325-36A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.613-36A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.349-36A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.668-36A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.631-36A>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.866-36A>G
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12443
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

19-51381629-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51381629
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51381629
    reference: chr 19
allele count: 1
allele frequency: 8.535481998668465e-6
allele num: 117158
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*160-31T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.773-31T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.314-31T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.325-31T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.631-31T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.349-31T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*507-31T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.668-31T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*55-31T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.866-31T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*321-31T>C
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.613-31T>C
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12442
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

19-51381630-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51381630
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51381630
    reference: chr 19
allele count: 1
allele frequency: 8.535627710061798e-6
allele num: 117156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.325-30C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*55-30C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.613-30C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*321-30C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.773-30C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.631-30C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.314-30C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.349-30C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*507-30C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*160-30C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.668-30C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.866-30C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12442
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

19-51381642-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51381642
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51381642
    reference: chr 19
allele count: 1
allele frequency: 8.480757161999423e-6
allele num: 117914
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.349-18C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*55-18C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.325-18C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.631-18C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*507-18C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.668-18C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*160-18C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.314-18C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*321-18C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.613-18C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.773-18C>G
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.866-18C>G
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12442
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

19-51381645-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51381645
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51381645
    reference: chr 19
allele count: 5
allele frequency: 4.23140719677736e-5
allele num: 118164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.773-15C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.314-15C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*321-15C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*55-15C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.613-15C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.668-15C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.631-15C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.325-15C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.866-15C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*160-15C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*507-15C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.349-15C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

19-51381647-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51381647
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51381647
    reference: chr 19
allele count: 1
allele frequency: 8.450513791238508e-6
allele num: 118336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*55-13C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.613-13C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.325-13C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*160-13C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.866-13C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*507-13C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.314-13C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.349-13C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.631-13C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.668-13C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.773-13C>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*321-13C>T
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12445
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS

19-51381661-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51381661
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51381661
    reference: chr 19
allele count: 1
allele frequency: 8.363581620193032e-6
allele num: 119566
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.614G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*508G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.350G>T
  hgvsp: ENSP00000471725.1:p.Val118Leu
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*161G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.326G>T
  hgvsp: ENSP00000375686.2:p.Gly109Val
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.669G>T
  hgvsp: ENST00000358049.4:c.669G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.774G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.315G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.632G>T
  hgvsp: ENSP00000313581.2:p.Gly211Val
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*322G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*56G>T
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.867G>T
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12445
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly211Val
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

19-51381670-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51381670
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51381670
    reference: chr 19
allele count: 1
allele frequency: 8.310065150910783e-6
allele num: 120336
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.623G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.783G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*517G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.324G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.*6G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.641G>A
  hgvsp: ENSP00000313581.2:p.Gly214Glu
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*331G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*65G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.876G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.335G>A
  hgvsp: ENSP00000375686.2:p.Gly112Glu
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.359G>A
  hgvsp: ENSP00000471725.1:p.Gly121Arg
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*170G>A
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7891
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly214Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

19-51381671-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51381671
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51381671
    reference: chr 19
allele count: 1
allele frequency: 8.307165761185599e-6
allele num: 120378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.784G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.877G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*66G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*171G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.642G>A
  hgvsp: ENST00000325321.3:c.642G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.*7G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.624G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*518G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*332G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.360G>A
  hgvsp: ENSP00000471725.1:p.Gly121Glu
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.325G>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.336G>A
  hgvsp: ENST00000391810.2:c.336G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly121Glu
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/19-51381675-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51381675
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 51381675
    reference: chr 19
allele count: 1
allele frequency: 8.289674381590291e-6
allele num: 120632
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471214
  ensembl transcript: ENST00000597439
  gene symbol: KLK2
  hgvsc: ENST00000597439.1:c.*175C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600866
  gene symbol: KLK2
  hgvsc: ENST00000600866.1:n.628C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000595173
  gene symbol: KLK2
  hgvsc: ENST00000595173.1:n.881C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000350748
  ensembl transcript: ENST00000358049
  gene symbol: KLK2
  hgvsc: ENST00000358049.4:c.*11C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472095
  ensembl transcript: ENST00000594174
  gene symbol: KLK2
  hgvsc: ENST00000594174.1:c.*522C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000597461
  gene symbol: KLK2
  hgvsc: ENST00000597461.1:n.329C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471321
  ensembl transcript: ENST00000597911
  gene symbol: KLK2
  hgvsc: ENST00000597911.1:c.*70C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000313581
  ensembl transcript: ENST00000325321
  gene symbol: KLK2
  hgvsc: ENST00000325321.3:c.646C>A
  hgvsp: ENSP00000313581.2:p.Pro216Thr
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000375686
  ensembl transcript: ENST00000391810
  gene symbol: KLK2
  hgvsc: ENST00000391810.2:c.340C>A
  hgvsp: ENSP00000375686.2:p.Pro114Thr
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167751
  ensembl transcript: ENST00000600755
  gene symbol: KLK2
  hgvsc: ENST00000600755.1:n.788C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000472499
  ensembl transcript: ENST00000599121
  gene symbol: KLK2
  hgvsc: ENST00000599121.1:c.*336C>A
  variant of: http://identifiers.org/hgnc/6363
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167751
  ensembl protein: ENSP00000471725
  ensembl transcript: ENST00000595050
  gene symbol: KLK2
  hgvsc: ENST00000595050.1:c.364C>A
  hgvsp: ENST00000595050.1:c.364C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6363
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro216Thr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

GenotypeDepth
all individuals: 2906
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1043
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 164
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 651
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 312
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7933
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 350
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 409
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3364
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4560
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3471
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9226
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1554
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2407
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9893
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26204
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.312138728323699e-4
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 2.092966e6

FS
type: SiteQuality
SIO_000300: 7.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: 5.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.356e1

GenotypeDepth
all individuals: 410
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7933
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1665
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 164
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16382
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 312
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9228
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4559
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2407
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9893
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26205
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3364
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3471
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.63e0

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 1.282e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 5.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.104e0

DP
type: SiteQuality
SIO_000300: 2.093205e6

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5374
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2906
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1665
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 650
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 225
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1044
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9225
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2407
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4557
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9894
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26209
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3367
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3470
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e0

FS
type: SiteQuality
SIO_000300: 8.728999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

DP
type: SiteQuality
SIO_000300: 2.092858e6

VQSLOD
type: SiteQuality
SIO_000300: -4.41e-1

QD
type: SiteQuality
SIO_000300: 1.272e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1043
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7932
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 180
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4484
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 347
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 164
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 312
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9224
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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FS
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VQSLOD
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DP
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QD
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ClippingRankSum
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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South Asian
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African
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East Asian
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BaseQRankSum
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InbreedingCoeff
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DP
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MQ
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QD
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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FS
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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FS
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VQSLOD
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MQ
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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DP
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ClippingRankSum
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FS
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MQ
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QD
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InbreedingCoeff
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Latino
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East Asian
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European (Finnish)
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Other
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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QD
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FS
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BaseQRankSum
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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South Asian
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QD
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DP
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BaseQRankSum
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InbreedingCoeff
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FS
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MQRankSum
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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BaseQRankSum
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VQSLOD
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MQRankSum
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MQ
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FS
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DP
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InbreedingCoeff
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GenotypeQuality
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European (Non-Finnish)
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African
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European (Finnish)
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East Asian
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VQSLOD
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QD
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ReadPosRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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DP
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MQ
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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South Asian
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East Asian
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BaseQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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FS
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DP
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MQ
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MQRankSum
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ReadPosRankSum
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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DP
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VQSLOD
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MQ
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MQRankSum
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InbreedingCoeff
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FS
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QD
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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African
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Latino
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East Asian
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European (Finnish)
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MQRankSum
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BaseQRankSum
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DP
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MQ
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InbreedingCoeff
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QD
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VQSLOD
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FS
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ClippingRankSum
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ReadPosRankSum
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East Asian
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MQ
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VQSLOD
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 16504
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Latino
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Other
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MQRankSum
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FS
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ReadPosRankSum
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MQ
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QD
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InbreedingCoeff
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BaseQRankSum
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DP
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
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African
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South Asian
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VQSLOD
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QD
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FS
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ClippingRankSum
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MQ
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DP
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
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Other
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num of homozygotes: 0

QD
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FS
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VQSLOD
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MQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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Other
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MQ
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InbreedingCoeff
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FS
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MQRankSum
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ClippingRankSum
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VQSLOD
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DP
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ReadPosRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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African
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South Asian
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European (Non-Finnish)
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European (Finnish)
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MQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66512
num of homozygotes: 0

European (Finnish)
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South Asian
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East Asian
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African
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Latino
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Other
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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DP
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MQRankSum
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.008423586040914e-5
allele num: 66480
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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SIO_000300: 4.85e-1

InbreedingCoeff
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DP
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QD
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VQSLOD
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BaseQRankSum
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MQ
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SIO_000300: 5.974e1

ClippingRankSum
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SIO_000300: 1.54e0

ReadPosRankSum
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FS
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 15484
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QD
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SIO_000300: 1.234e1

VQSLOD
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SIO_000300: 1.2e0

ClippingRankSum
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SIO_000300: -4.66e-1

DP
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InbreedingCoeff
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MQRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 5.959e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
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FS
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SIO_000300: 1.627e0

ReadPosRankSum
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DP
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MQRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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QD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 65968
num of homozygotes: 0

European (Finnish)
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East Asian
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allele frequency: 0.0e0
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African
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Latino
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Other
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BaseQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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FS
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ClippingRankSum
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VQSLOD
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MQRankSum
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DP
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MQ
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SIO_000300: 5.949e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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African
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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ClippingRankSum
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MQ
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DP
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VQSLOD
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MQRankSum
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FS
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BaseQRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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Other
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ClippingRankSum
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VQSLOD
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FS
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BaseQRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 6.117143294081663e-5
allele num: 65390
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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QD
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.529285823520416e-5
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num of homozygotes: 0

Other
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European (Finnish)
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East Asian
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MQ
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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QD
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65414
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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allele num: 10332
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East Asian
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num of homozygotes: 0

Other
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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DP
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ClippingRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
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African
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East Asian
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Other
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Latino
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South Asian
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ClippingRankSum
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FS
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VQSLOD
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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Other
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InbreedingCoeff
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MQ
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MQRankSum
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VQSLOD
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QD
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BaseQRankSum
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FS
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DP
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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MQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQ
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FS
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BaseQRankSum
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DP
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1524
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2138
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 5.360205831903945e-5
allele num: 18656
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 3.54e-2

BaseQRankSum
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MQRankSum
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VQSLOD
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MQ
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FS
type: SiteQuality
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QD
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ReadPosRankSum
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SIO_000300: 9.58e-1

ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1524
num of homozygotes: 0

African
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allele count: 1
allele frequency: 3.056234718826406e-4
allele num: 3272
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2138
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 18656
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2276
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.54e-2

DP
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MQ
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MQRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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FS
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SIO_000300: 2.005e0

ClippingRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14056
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1674
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 932
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1202
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.5e-1

QD
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SIO_000300: 1.684e1

ReadPosRankSum
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SIO_000300: 7.27e-1

ClippingRankSum
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SIO_000300: -7.27e-1

FS
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.80044e5

MQRankSum
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SIO_000300: 7.27e-1

BaseQRankSum
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SIO_000300: -7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.21e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 914
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1208
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.524390243902439e-3
allele num: 656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1942
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: -1.845e0

FS
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SIO_000300: 0.0e0

VQSLOD
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SIO_000300: -3.331e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.8e-1

QD
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SIO_000300: 4.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.76e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

DP
type: SiteQuality
SIO_000300: 3.37886e5

GenotypeDepth
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variant carriers: 7803

GenotypeDepth
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variant carriers: 854

GenotypeDepth
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GenotypeDepth
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variant carriers: 3261

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 3

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 100

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 244

East Asian
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allele count: 313
allele frequency: 3.294736842105263e-1
allele num: 950
num of homozygotes: 33

African
type: Population
allele count: 537
allele frequency: 2.970132743362832e-1
allele num: 1808
num of homozygotes: 54

European (Non-Finnish)
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allele count: 3529
allele frequency: 3.519848394175145e-1
allele num: 10026
num of homozygotes: 439

Latino
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allele count: 195
allele frequency: 3.228476821192053e-1
allele num: 604
num of homozygotes: 21

Other
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allele count: 41
allele frequency: 3.014705882352941e-1
allele num: 136
num of homozygotes: 6

South Asian
type: Population
allele count: 268
allele frequency: 2.463235294117647e-1
allele num: 1088
num of homozygotes: 28

European (Finnish)
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allele count: 368
allele frequency: 4.249422632794457e-1
allele num: 866
num of homozygotes: 57

InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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QD
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DP
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SIO_000300: 3.21994e5

VQSLOD
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SIO_000300: 5.18e0

MQ
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SIO_000300: 6.0e1

FS
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SIO_000300: 0.0e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3594
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 430
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
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East Asian
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allele count: 0
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MQRankSum
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FS
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BaseQRankSum
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DP
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InbreedingCoeff
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SIO_000300: -8.34e-2

VQSLOD
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ClippingRankSum
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QD
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ReadPosRankSum
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MQ
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SIO_000300: 6.0e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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Other
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MQ
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InbreedingCoeff
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MQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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South Asian
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East Asian
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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FS
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ReadPosRankSum
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DP
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QD
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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DP
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QD
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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FS
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BaseQRankSum
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MQRankSum
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SIO_000300: 5.5e-1

ClippingRankSum
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MQ
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SIO_000300: 6.0e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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Latino
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European (Non-Finnish)
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African
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Other
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European (Finnish)
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QD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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DP
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VQSLOD
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BaseQRankSum
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MQ
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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South Asian
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ReadPosRankSum
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VQSLOD
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DP
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ClippingRankSum
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QD
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FS
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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Latino
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South Asian
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European (Non-Finnish)
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InbreedingCoeff
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FS
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MQ
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ClippingRankSum
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VQSLOD
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QD
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ReadPosRankSum
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DP
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MQRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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Other
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European (Finnish)
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African
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East Asian
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QD
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BaseQRankSum
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FS
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ClippingRankSum
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MQ
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DP
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.395604395604396e-2
allele num: 182
num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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South Asian
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Other
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BaseQRankSum
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SIO_000300: 3.22e-1

FS
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InbreedingCoeff
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MQ
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DP
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 5.0e-2
allele num: 40
num of homozygotes: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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QD
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ClippingRankSum
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MQRankSum
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VQSLOD
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FS
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BaseQRankSum
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DP
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MQ
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InbreedingCoeff
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SIO_000300: -1.093e-1

ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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East Asian
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DP
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FS
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MQ
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InbreedingCoeff
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VQSLOD
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
type: Population
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allele frequency: 0.0e0
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Latino
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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DP
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SIO_000300: 2.7538e4

MQ
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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QD
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FS
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ReadPosRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 38
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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South Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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QD
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DP
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BaseQRankSum
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FS
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MQ
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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European (Finnish)
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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FS
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QD
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VQSLOD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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African
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South Asian
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Other
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BaseQRankSum
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FS
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DP
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MQ
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2128
bin: 8.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65606
num of homozygotes: 0

African
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allele count: 3
allele frequency: 2.893518518518518e-4
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.91e0

InbreedingCoeff
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SIO_000300: 1.48e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
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SIO_000300: 1.94e-1

BaseQRankSum
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SIO_000300: 3.47e0

FS
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.54e-1

ClippingRankSum
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SIO_000300: 1.86e-1

DP
type: SiteQuality
SIO_000300: 3.601982e6

QD
type: SiteQuality
SIO_000300: 1.548e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 12440
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.572752492150108e-5
allele num: 65606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.47e0

VQSLOD
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SIO_000300: 5.91e0

InbreedingCoeff
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SIO_000300: 1.48e-2

ReadPosRankSum
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ClippingRankSum
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DP
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SIO_000300: 3.601982e6

FS
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SIO_000300: 0.0e0

MQRankSum
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SIO_000300: 1.94e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.548e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1939
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13290
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

East Asian
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allele count: 5
allele frequency: 5.789717461787865e-4
allele num: 8636
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
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SIO_000300: 1.33e0

QD
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DP
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SIO_000300: 3.605722e6

MQRankSum
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SIO_000300: -7.02e-1

ClippingRankSum
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BaseQRankSum
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VQSLOD
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SIO_000300: 6.47e-1

FS
type: SiteQuality
SIO_000300: 4.106e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeDepth
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bin: 9.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 31218
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GenotypeQuality
all individuals: 1975
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.451564828614009e-5
allele num: 13420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: -9.85e-1

BaseQRankSum
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InbreedingCoeff
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SIO_000300: -5.0e-4

ClippingRankSum
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SIO_000300: 1.59e0

MQRankSum
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QD
type: SiteQuality
SIO_000300: 1.506e1

VQSLOD
type: SiteQuality
SIO_000300: 1.87e-1

DP
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SIO_000300: 3.607901e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 65686
num of homozygotes: 0

South Asian
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allele num: 13424
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
SIO_000300: 2.053e0

QD
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MQ
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SIO_000300: 5.981e1

VQSLOD
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MQRankSum
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ReadPosRankSum
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SIO_000300: 2.93e-1

DP
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SIO_000300: 3.608669e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.44e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.518418415378542e-5
allele num: 65858
num of homozygotes: 0

Latino
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allele count: 0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.994e0

BaseQRankSum
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SIO_000300: 3.57e-1

ClippingRankSum
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DP
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MQ
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SIO_000300: 5.638e1

MQRankSum
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ReadPosRankSum
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VQSLOD
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SIO_000300: -1.592e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
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SIO_000300: 1.313e1

GenotypeDepth
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bin: 9.75e1
variant carriers: 4

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 105
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.068513517613861e-5
allele num: 65914
num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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DP
type: SiteQuality
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ClippingRankSum
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FS
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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QD
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ReadPosRankSum
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1843
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1596
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2681
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65960
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.272e1

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.12e-1

DP
type: SiteQuality
SIO_000300: 3.626318e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.358e0

FS
type: SiteQuality
SIO_000300: 1.567e0

GenotypeDepth
all individuals: 1690
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 899
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1260
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1928
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1611
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1962
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1651
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 991
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13426
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2160
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4573
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31215
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1877
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2714
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66282
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.592827004219409e-5
allele num: 15168
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.643352e6

QD
type: SiteQuality
SIO_000300: 1.764e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.092e0

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

GenotypeDepth
all individuals: 12445
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2215
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5253
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1905
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31214
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 151
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1654
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4673
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2733
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2170
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14089
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15760
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505162708088744e-5
allele num: 66438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.445e0

QD
type: SiteQuality
SIO_000300: 7.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.87e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

DP
type: SiteQuality
SIO_000300: 3.654391e6

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

FS
type: SiteQuality
SIO_000300: 8.664999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.738e0

GenotypeDepth
all individuals: 12446
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1611
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1498
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4693
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1655
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14071
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2172
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2738
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31214
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66454
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.066e0

DP
type: SiteQuality
SIO_000300: 3.654953e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.933e1

VQSLOD
type: SiteQuality
SIO_000300: -2.685e0

QD
type: SiteQuality
SIO_000300: 3.89e0

GenotypeDepth
all individuals: 12446
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1497
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1963
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4711
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1657
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31217
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2743
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14333
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15974
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.32e-1

DP
type: SiteQuality
SIO_000300: 3.658817e6

MQ
type: SiteQuality
SIO_000300: 5.981e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.14e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4