X-89177736-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177736
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177736
    reference: chr 0
allele count: 1
allele frequency: 1.151079136690648e-5
allele num: 86875
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.652C>T
  hgvsp: ENST00000283891.5:c.652C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.652C>T
  hgvsp: ENST00000561129.2:c.652C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 21769
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hgvs: p.Leu218Leu
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.104421389339001e-5
  allele num: 47519
  num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD

X-89177739-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177739
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177739
    reference: chr 0
allele count: 1
allele frequency: 1.152432208175354e-5
allele num: 86773
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.655C>G
  hgvsp: ENSP00000453704.1:p.Leu219Val
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.655C>G
  hgvsp: ENSP00000355119.4:p.Leu219Val
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10677
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu219Val
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10071
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

X-89177739-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177739
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177739
    reference: chr 0
allele count: 1
allele frequency: 1.152432208175354e-5
allele num: 86773
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.655C>T
  hgvsp: ENST00000561129.2:c.655C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.655C>T
  hgvsp: ENST00000283891.5:c.655C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu219Leu
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8159
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

X-89177747-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177747
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177747
    reference: chr 0
allele count: 2
allele frequency: 2.309202170650041e-5
allele num: 86610
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.663C>G
  hgvsp: ENST00000283891.5:c.663C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.663C>G
  hgvsp: ENST00000561129.2:c.663C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Val221Val
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10029
  num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-89177747-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177747
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177747
    reference: chr 0
allele count: 1
allele frequency: 1.15460108532502e-5
allele num: 86610
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.663C>T
  hgvsp: ENST00000283891.5:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.663C>T
  hgvsp: ENST00000561129.2:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2818
  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 19551
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1235
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val221Val
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 47432
  num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD

X-89177748-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177748
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177748
    reference: chr 0
allele count: 1
allele frequency: 1.154681077086509e-5
allele num: 86604
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.664G>A
  hgvsp: ENSP00000355119.4:p.Asp222Asn
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.664G>A
  hgvsp: ENSP00000453704.1:p.Asp222Asn
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7336
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1965
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 21771
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asp222Asn
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4528
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum

X-89177765-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177765
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177765
    reference: chr 0
allele count: 3
allele frequency: 3.489345863962036e-5
allele num: 85976
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.681G>A
  hgvsp: ENST00000561129.2:c.681G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.681G>A
  hgvsp: ENST00000283891.5:c.681G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2735
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genotype depth: GenotypeDepth
  all individuals: 603
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5556
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg227Arg
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 3
  allele frequency: 6.344909267797471e-5
  allele num: 47282
  num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

X-89177768-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177768
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177768
    reference: chr 0
allele count: 1
allele frequency: 1.165243127978653e-5
allele num: 85819
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.684T>G
  hgvsp: ENST00000283891.5:c.684T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.684T>G
  hgvsp: ENST00000561129.2:c.684T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala228Ala
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9573
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

X-89177771-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177771
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177771
    reference: chr 0
allele count: 1
allele frequency: 1.16918040453642e-5
allele num: 85530
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.687C>G
  hgvsp: ENST00000561129.2:c.687C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.687C>G
  hgvsp: ENST00000283891.5:c.687C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ala229Ala
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 615
  num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
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site quality: QD

X-89177771-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177771
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177771
    reference: chr 0
allele count: 1
allele frequency: 1.16918040453642e-5
allele num: 85530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.687C>T
  hgvsp: ENST00000283891.5:c.687C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.687C>T
  hgvsp: ENST00000561129.2:c.687C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 1.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ala229Ala
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6619
  num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
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X-89177781-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177781
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177781
    reference: chr 0
allele count: 1
allele frequency: 1.176553639080406e-5
allele num: 84994
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.697C>G
  hgvsp: ENSP00000453704.1:p.Leu233Val
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.697C>G
  hgvsp: ENSP00000355119.4:p.Leu233Val
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Leu233Val
num of homozygotes: 0
population: East Asian
  type: Population
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  allele num: 6625
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

X-89177789-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177789
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177789
    reference: chr 0
allele count: 1
allele frequency: 1.184385067273072e-5
allele num: 84432
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.705G>T
  hgvsp: ENSP00000355119.4:p.Lys235Asn
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.705G>T
  hgvsp: ENSP00000453704.1:p.Lys235Asn
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Lys235Asn
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6626
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
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site quality: DP
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X-89177792-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177792
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177792
    reference: chr 0
allele count: 1
allele frequency: 1.187761307487647e-5
allele num: 84192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.708G>A
  hgvsp: ENST00000283891.5:c.708G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.708G>A
  hgvsp: ENST00000561129.2:c.708G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 688
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Lys236Lys
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7778
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

X-89177796-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177796
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177796
    reference: chr 0
allele count: 3
allele frequency: 3.576793762071679e-5
allele num: 83874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.712G>A
  hgvsp: ENSP00000355119.4:p.Glu238Lys
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.712G>A
  hgvsp: ENSP00000453704.1:p.Glu238Lys
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 9.75e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Glu238Lys
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 2
  allele frequency: 4.291569212282471e-5
  allele num: 46603
  num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
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X-89177796-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177796
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177796
    reference: chr 0
allele count: 1
allele frequency: 1.192264587357226e-5
allele num: 83874
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.712G>C
  hgvsp: ENSP00000355119.4:p.Glu238Gln
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.712G>C
  hgvsp: ENSP00000453704.1:p.Glu238Gln
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Glu238Gln
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 46603
  num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

X-89177806-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177806
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177806
    reference: chr 0
allele count: 1
allele frequency: 1.20576354976789e-5
allele num: 82935
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.722C>G
  hgvsp: ENSP00000453704.1:p.Pro241Arg
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.722C>G
  hgvsp: ENSP00000355119.4:p.Pro241Arg
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1546
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Pro241Arg
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.160667214035694e-5
  allele num: 46282
  num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ

X-89177808-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177808
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177808
    reference: chr 0
allele count: 1
allele frequency: 1.21068306738662e-5
allele num: 82598
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.724T>A
  hgvsp: ENSP00000355119.4:p.Ter242ArgextTer9
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: stop_lost
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.724T>A
  hgvsp: ENSP00000453704.1:p.Ter242ArgextTer9
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ter242ArgextTer9
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7818
  num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

X-89177817-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177817
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177817
    reference: chr 0
allele count: 1
allele frequency: 1.218724482956138e-5
allele num: 82053
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.*7A>G
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.*7A>G
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2767
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genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 21795
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  variant carriers: 1
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 1.325556733828208e-4
  allele num: 7544
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP

X-89177832-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177832
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177832
    reference: chr 0
allele count: 1
allele frequency: 1.233821515379585e-5
allele num: 81049
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.*22A>T
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.*22A>T
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4033
  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2221
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1251
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 441
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  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 579
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: A
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD

X-89177834-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177834
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177834
    reference: chr 0
allele count: 1
allele frequency: 1.234689845910707e-5
allele num: 80992
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.*24G>C
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.*24G>C
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2763
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 428
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9270
  num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP

X-89177834-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177834
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177834
    reference: chr 0
allele count: 37
allele frequency: 4.568352429869617e-4
allele num: 80992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.*24G>T
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.*24G>T
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4035
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 34
  allele frequency: 4.53514739229025e-3
  allele num: 7497
  num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

X-89177836-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177836
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177836
    reference: chr 0
allele count: 3
allele frequency: 3.708098487095817e-5
allele num: 80904
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.*26A>C
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.*26A>C
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9267
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

X-89177839-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177839
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177839
    reference: chr 0
allele count: 1
allele frequency: 1.238175424694171e-5
allele num: 80764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.*29C>T
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.*29C>T
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
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  allele frequency: 1.517450682852807e-4
  allele num: 6590
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

X-89177845-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177845
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177845
    reference: chr 0
allele count: 4
allele frequency: 4.969561436203255e-5
allele num: 80490
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.*35C>T
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.*35C>T
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: Other
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  allele num: 574
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population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
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site quality: DP
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X-89177850-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177850
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177850
    reference: chr 0
allele count: 1
allele frequency: 1.247800751176052e-5
allele num: 80141
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.*40G>A
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.*40G>A
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: East Asian
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  allele num: 6582
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population: South Asian
population: African
population: Other
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population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

X-89177853-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177853
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177853
    reference: chr 0
allele count: 1
allele frequency: 1.250891260022766e-5
allele num: 79943
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.*43C>T
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.*43C>T
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9261
  num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

X-89177858-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24089177858
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24089177858
    reference: chr 0
allele count: 7
allele frequency: 8.778970602989867e-5
allele num: 79736
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000355119
  ensembl transcript: ENST00000283891
  gene symbol: TGIF2LX
  hgvsc: ENST00000283891.5:c.*48G>A
  variant of: http://identifiers.org/hgnc/18570
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000153779
  ensembl protein: ENSP00000453704
  ensembl transcript: ENST00000561129
  gene symbol: TGIF2LX
  hgvsc: ENST00000561129.2:c.*48G>A
  variant of: http://identifiers.org/hgnc/18570
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9257
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ

X-90690534-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690534
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690535
    reference: chr 0
allele count: 1
allele frequency: 1.503442884204829e-5
allele num: 66514
alternate allele: CT
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.-37dupT
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-498dupT
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3835
  num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

X-90690550-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690550
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690550
    reference: chr 0
allele count: 1
allele frequency: 1.443334680445702e-5
allele num: 69284
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.-27G>C
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-488G>C
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8254
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

X-90690561-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690561
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690561
    reference: chr 0
allele count: 1
allele frequency: 1.370144550250051e-5
allele num: 72985
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-477C>T
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.-16C>T
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11206
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
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  allele frequency: 0.0e0
  allele num: 7808
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population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
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site quality: MQ

X-90690562-C-A
type: Variant
location: Region
  begin: Position
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    position: 24090690562
    reference: chr 0
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    type: ExactPosition
    position: 24090690562
    reference: chr 0
allele count: 1
allele frequency: 1.362509196937079e-5
allele num: 73394
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.-15C>A
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-476C>A
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
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  allele num: 41733
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population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
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site quality: VQSLOD
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site quality: MQ
site quality: InbreedingCoeff
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X-90690570-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690570
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690570
    reference: chr 0
allele count: 2
allele frequency: 2.639218791237794e-5
allele num: 75780
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.-7C>G
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-468C>G
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Non-Finnish)
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  allele num: 43018
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
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site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
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X-90690570-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690570
    reference: chr 0
  end: Position
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    position: 24090690569
    reference: chr 0
allele count: 1
allele frequency: 1.319609395618897e-5
allele num: 75780
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.-6delA
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-467delA
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: Latino
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population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: CA
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
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X-90690572-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690572
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690572
    reference: chr 0
allele count: 12
allele frequency: 1.572450664360406e-4
allele num: 76314
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.-5G>C
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-466G>C
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 12
  allele frequency: 2.769507720002769e-4
  allele num: 43329
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS

X-90690574-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690574
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690574
    reference: chr 0
allele count: 16
allele frequency: 2.086131139418752e-4
allele num: 76697
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.-3G>C
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-464G>C
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 3
  allele frequency: 4.756619628983669e-4
  allele num: 6307
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-90690581-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690581
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690581
    reference: chr 0
allele count: 1
allele frequency: 1.284026707755521e-5
allele num: 77880
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.5G>A
  hgvsp: ENSP00000308012.3:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-457G>A
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly2Glu
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 1
  allele frequency: 1.568381430363864e-4
  allele num: 6376
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

X-90690586-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690586
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690586
    reference: chr 0
allele count: 11
allele frequency: 1.393869508470925e-4
allele num: 78917
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-452G>A
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.10G>A
  hgvsp: ENSP00000308012.3:p.Gly4Arg
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly4Arg
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4200
  num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
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site quality: MQ
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X-90690589-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690589
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690589
    reference: chr 0
allele count: 4
allele frequency: 5.029105950689616e-5
allele num: 79537
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.13G>A
  hgvsp: ENSP00000308012.3:p.Glu5Lys
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-449G>A
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 1
hgvs: p.Glu5Lys
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6167
  num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-90690606-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690606
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690606
    reference: chr 0
allele count: 15
allele frequency: 1.829335219581204e-4
allele num: 81997
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-432C>T
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.30C>T
  hgvsp: ENST00000312600.3:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 191
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1960
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 244
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 699
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 44492
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  variant carriers: 0
hgvs: p.Gly10Gly
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7189
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

X-90690617-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690617
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690617
    reference: chr 0
allele count: 1
allele frequency: 1.205952581944478e-5
allele num: 82922
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.41A>G
  hgvsp: ENSP00000308012.3:p.Lys14Arg
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-421A>G
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 360
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genotype depth: GenotypeDepth
  all individuals: 9
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
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genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
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genotype quality: GenotypeQuality
  all individuals: 285
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4284
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  variant carriers: 0
hgvs: p.Lys14Arg
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 587
  num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD

X-90690627-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690627
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690627
    reference: chr 0
allele count: 6
allele frequency: 7.155976432984281e-5
allele num: 83846
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.51G>A
  hgvsp: ENST00000312600.3:c.51G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-411G>A
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 58
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
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genotype quality: GenotypeQuality
  all individuals: 267
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 5
hgvs: p.Lys17Lys
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 6
  allele frequency: 9.144947416552355e-4
  allele num: 6561
  num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

X-90690630-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690630
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690630
    reference: chr 0
allele count: 1
allele frequency: 1.190802243471427e-5
allele num: 83977
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.54C>T
  hgvsp: ENST00000312600.3:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-408C>T
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13354
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 878
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 444
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  variant carriers: 0
hgvs: p.Ala18Ala
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4324
  num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

X-90690631-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690631
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690631
    reference: chr 0
allele count: 1
allele frequency: 1.188396496607128e-5
allele num: 84147
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.55G>T
  hgvsp: ENSP00000308012.3:p.Ala19Ser
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-407G>T
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala19Ser
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 46543
  num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum

X-90690633-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690633
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690633
    reference: chr 0
allele count: 1
allele frequency: 1.18496048156794e-5
allele num: 84391
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-405T>A
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.57T>A
  hgvsp: ENST00000312600.3:c.57T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13436
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala19Ala
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 600
  num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff

X-90690636-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690636
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690636
    reference: chr 0
allele count: 56
allele frequency: 6.629651114610093e-4
allele num: 84469
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.60G>T
  hgvsp: ENST00000312600.3:c.60G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-402G>T
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 600
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

X-90690642-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690642
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690642
    reference: chr 0
allele count: 1
allele frequency: 1.181320953089745e-5
allele num: 84651
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.66G>A
  hgvsp: ENST00000312600.3:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-396G>A
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Val22Val
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 605
  num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

X-90690674-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690674
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690674
    reference: chr 0
allele count: 1
allele frequency: 1.18378218407813e-5
allele num: 84475
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-364T>C
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.98T>C
  hgvsp: ENSP00000308012.3:p.Met33Thr
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Met33Thr
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population: Latino
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  allele frequency: 0.0e0
  allele num: 9093
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: FS
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X-90690684-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690684
    reference: chr 0
  end: Position
    type: ExactPosition
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allele count: 1
allele frequency: 1.186859096088112e-5
allele num: 84256
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
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  ensembl protein: ENSP00000308012
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  gene symbol: PABPC5
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  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
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  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Finnish)
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population: East Asian
population: Latino
population: Other
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population: African
population: South Asian
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X-90690694-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690694
    reference: chr 0
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    type: ExactPosition
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allele count: 1
allele frequency: 1.191426494942395e-5
allele num: 83933
alternate allele: T
annotation: Annotation
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  gene symbol: PABPC5
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  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
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  ensembl protein: ENSP00000308012
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  gene symbol: PABPC5
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  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
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population: Latino
population: African
population: South Asian
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X-90690718-C-G
type: Variant
location: Region
  begin: Position
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    reference: chr 0
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    type: ExactPosition
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allele count: 1
allele frequency: 1.196931068739751e-5
allele num: 83547
alternate allele: G
annotation: Annotation
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  ensembl protein: ENSP00000308012
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  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.142C>G
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  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
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  gene symbol: PABPC5
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  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
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population: African
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X-90690720-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690720
    reference: chr 0
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    type: ExactPosition
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allele frequency: 1.193702028099746e-5
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alternate allele: G
annotation: Annotation
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  ensembl protein: ENSP00000308012
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  gene symbol: PABPC5
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  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
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  variant of: http://identifiers.org/hgnc/13629
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 899
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 692
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 115
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 805
  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 436
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33818
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg48Arg
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 588
  num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

X-90690733-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690733
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690733
    reference: chr 0
allele count: 1
allele frequency: 1.19544297139305e-5
allele num: 83651
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-305C>G
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.157C>G
  hgvsp: ENSP00000308012.3:p.Pro53Ala
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9321
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
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genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
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genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6549
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 7633
  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 283
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 739
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Pro53Ala
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9460
  num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

X-90690735-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690735
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690735
    reference: chr 0
allele count: 1
allele frequency: 1.196873765723929e-5
allele num: 83551
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.159G>A
  hgvsp: ENST00000312600.3:c.159G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-303G>A
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6495
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
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genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 966
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
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  variant carriers: 0
hgvs: p.Pro53Pro
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 594
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

X-90690741-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690741
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690741
    reference: chr 0
allele count: 9
allele frequency: 1.076040172166428e-4
allele num: 83640
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-297C>T
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.165C>T
  hgvsp: ENST00000312600.3:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9285
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3940
  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3216
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr55Thr
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4254
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

X-90690747-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690747
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690747
    reference: chr 0
allele count: 1
allele frequency: 1.195685965038142e-5
allele num: 83634
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-291C>A
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.171C>A
  hgvsp: ENSP00000308012.3:p.Ser57Arg
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 3882
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32803
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser57Arg
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4254
  num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

X-90690756-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690756
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690756
    reference: chr 0
allele count: 1
allele frequency: 1.194158178192283e-5
allele num: 83741
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-282C>T
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.180C>T
  hgvsp: ENST00000312600.3:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Gly60Gly
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9044
  num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

X-90690761-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690761
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690761
    reference: chr 0
allele count: 1
allele frequency: 1.192876143670003e-5
allele num: 83831
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.185G>A
  hgvsp: ENSP00000308012.3:p.Gly62Glu
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-277G>A
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Gly62Glu
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9533
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

X-90690783-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690783
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690783
    reference: chr 0
allele count: 1
allele frequency: 1.188608377311843e-5
allele num: 84132
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.207C>G
  hgvsp: ENST00000312600.3:c.207C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-255C>G
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro69Pro
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8217
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP

X-90690786-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690786
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690786
    reference: chr 0
allele count: 2
allele frequency: 2.368770134546144e-5
allele num: 84432
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.210G>A
  hgvsp: ENST00000312600.3:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-252G>A
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala70Ala
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9648
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD

X-90690795-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690795
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690795
    reference: chr 0
allele count: 2
allele frequency: 2.355657110550988e-5
allele num: 84902
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-243G>A
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.219G>A
  hgvsp: ENST00000312600.3:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5812
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2652
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30329
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5067
  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39750
  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2351
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 309
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu73Glu
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8276
  num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

X-90690795-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690795
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690795
    reference: chr 0
allele count: 11
allele frequency: 1.295611410803044e-4
allele num: 84902
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-243G>C
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.219G>C
  hgvsp: ENSP00000308012.3:p.Glu73Asp
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
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genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 1.75e1
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genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2652
  bin: 7.5e0
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genotype depth: GenotypeDepth
  all individuals: 9
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5067
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1917
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genotype quality: GenotypeQuality
  all individuals: 445
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  variant carriers: 8
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 309
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genotype quality: GenotypeQuality
  all individuals: 669
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4078
  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu73Asp
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 8
  allele frequency: 1.725848901928636e-4
  allele num: 46354
  num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

X-90690804-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690804
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690804
    reference: chr 0
allele count: 1
allele frequency: 1.173116854169844e-5
allele num: 85243
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.228G>A
  hgvsp: ENST00000312600.3:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-234G>A
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15442
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1023
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 657
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4214
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu76Leu
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9749
  num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP

X-90690810-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690810
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690810
    reference: chr 0
allele count: 1
allele frequency: 1.169440188981535e-5
allele num: 85511
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-228C>G
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.234C>G
  hgvsp: ENST00000312600.3:c.234C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 10
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43176
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4306
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 517
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 1623
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 422
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
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genotype quality: GenotypeQuality
  all individuals: 738
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 437
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr78Thr
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9183
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

X-90690811-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690811
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690811
    reference: chr 0
allele count: 1
allele frequency: 1.16851096647542e-5
allele num: 85579
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-227A>G
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.235A>G
  hgvsp: ENSP00000308012.3:p.Met79Val
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Met79Val
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
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  allele num: 4398
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population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: QD
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X-90690823-T-A
type: Variant
location: Region
  begin: Position
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    reference: chr 0
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    reference: chr 0
allele count: 1
allele frequency: 1.162155566144084e-5
allele num: 86047
alternate allele: A
annotation: Annotation
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  gene symbol: PABPC5
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annotation: Annotation
  canonical: true
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  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.247T>A
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  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: South Asian
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population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
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X-90690845-G-A
type: Variant
location: Region
  begin: Position
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    reference: chr 0
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allele count: 0
allele frequency: 0.0e0
allele num: 86737
alternate allele: A
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
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  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-193G>A
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: AC_Adj0_Filter
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population: East Asian
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X-90690864-A-G
type: Variant
location: Region
  begin: Position
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    position: 24090690864
    reference: chr 0
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    type: ExactPosition
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allele count: 1
allele frequency: 1.146604902882565e-5
allele num: 87214
alternate allele: G
annotation: Annotation
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  gene symbol: PABPC5
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  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
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  hgvsc: ENST00000312600.3:c.288A>G
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  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
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X-90690876-A-G
type: Variant
location: Region
  begin: Position
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    reference: chr 0
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    type: ExactPosition
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allele count: 1
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alternate allele: G
annotation: Annotation
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  gene symbol: PABPC5
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  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
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  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
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  variant of: http://identifiers.org/hgnc/13629
canonical: true
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Leu100Leu
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4523
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

X-90690886-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690886
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690886
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 87532
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.310G>A
  hgvsp: ENSP00000308012.3:p.Gly104Arg
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-152G>A
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly104Arg
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8476
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

X-90690888-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690888
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690888
    reference: chr 0
allele count: 1
allele frequency: 1.142178362573099e-5
allele num: 87552
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.312A>G
  hgvsp: ENST00000312600.3:c.312A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-150A>G
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly104Gly
num of homozygotes: 0
population: Latino
  type: Population
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  allele frequency: 0.0e0
  allele num: 9306
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ

X-90690899-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690899
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690899
    reference: chr 0
allele count: 6
allele frequency: 6.845407872219053e-5
allele num: 87650
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.323T>C
  hgvsp: ENSP00000308012.3:p.Ile108Thr
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-139T>C
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ile108Thr
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10114
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
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site quality: DP

X-90690920-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690920
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690920
    reference: chr 0
allele count: 1
allele frequency: 1.139899916787306e-5
allele num: 87727
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.344A>G
  hgvsp: ENSP00000308012.3:p.Lys115Arg
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-118A>G
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1225
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys115Arg
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8507
  num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

X-90690926-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690926
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690926
    reference: chr 0
allele count: 1
allele frequency: 1.13980896801696e-5
allele num: 87734
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-112T>C
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.350T>C
  hgvsp: ENSP00000308012.3:p.Ile117Thr
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 96
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 442
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genotype quality: GenotypeQuality
  all individuals: 858
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile117Thr
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.08420175072947e-5
  allele num: 47980
  num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

X-90690932-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690932
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690932
    reference: chr 0
allele count: 1
allele frequency: 1.139795976520203e-5
allele num: 87735
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-106A>G
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.356A>G
  hgvsp: ENSP00000308012.3:p.Asn119Ser
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 346
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn119Ser
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8509
  num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum

X-90690933-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690933
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690933
    reference: chr 0
allele count: 1
allele frequency: 1.139795976520203e-5
allele num: 87735
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.357T>C
  hgvsp: ENST00000312600.3:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-105T>C
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3047
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 139
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hgvs: p.Asn119Asn
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6638
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

X-90690957-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690957
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690957
    reference: chr 0
allele count: 1
allele frequency: 1.139782985319595e-5
allele num: 87736
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.381T>C
  hgvsp: ENST00000312600.3:c.381T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-81T>C
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
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  variant carriers: 1
hgvs: p.Ser127Ser
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10123
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

X-90690973-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690973
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690973
    reference: chr 0
allele count: 1
allele frequency: 1.139951894030072e-5
allele num: 87723
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.397C>A
  hgvsp: ENSP00000308012.3:p.Leu133Met
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-65C>A
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52092
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5238
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu133Met
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 1.175502527330434e-4
  allele num: 8507
  num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD

X-90690985-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24090690985
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24090690985
    reference: chr 0
allele count: 1
allele frequency: 1.140146850914398e-5
allele num: 87708
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000308012
  ensembl transcript: ENST00000312600
  gene symbol: PABPC5
  hgvsc: ENST00000312600.3:c.409G>C
  hgvsp: ENSP00000308012.3:p.Val137Leu
  variant of: http://identifiers.org/hgnc/13629
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174740
  ensembl protein: ENSP00000362197
  ensembl transcript: ENST00000373105
  gene symbol: PABPC5
  hgvsc: ENST00000373105.1:c.-31-53G>C
  variant of: http://identifiers.org/hgnc/13629
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51982
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val137Leu
num of homozygotes: 0
reference allele: G

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10093
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.534161e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.18e-2

MQ
type: SiteQuality
SIO_000300: 5.311e1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.66e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

FS
type: SiteQuality
SIO_000300: 2.453e0

QD
type: SiteQuality
SIO_000300: 2.395e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.075384449940854e-4
allele num: 9299
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8159
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.899e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.432e0

MQ
type: SiteQuality
SIO_000300: 5.319e1

VQSLOD
type: SiteQuality
SIO_000300: -1.666e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.042e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

DP
type: SiteQuality
SIO_000300: 2.532847e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47480
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.929500546122529e-5
allele num: 10071
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9299
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.042e1

FS
type: SiteQuality
SIO_000300: 5.899e0

MQ
type: SiteQuality
SIO_000300: 5.319e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.432e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.666e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

DP
type: SiteQuality
SIO_000300: 2.532847e6

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8079
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.150768899881708e-4
allele num: 9299
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.075e-1

FS
type: SiteQuality
SIO_000300: 4.948e0

MQ
type: SiteQuality
SIO_000300: 5.188e1

MQRankSum
type: SiteQuality
SIO_000300: 4.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.26e-1

QD
type: SiteQuality
SIO_000300: 1.443e1

DP
type: SiteQuality
SIO_000300: 2.530442e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10029
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.237776952593143e-4
allele num: 8079
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9299
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.188e1

VQSLOD
type: SiteQuality
SIO_000300: -4.075e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

DP
type: SiteQuality
SIO_000300: 2.530442e6

FS
type: SiteQuality
SIO_000300: 4.948e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

QD
type: SiteQuality
SIO_000300: 1.443e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8085
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.108770375993758e-5
allele num: 47421
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10024
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.95e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.682e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

FS
type: SiteQuality
SIO_000300: 2.285e0

MQ
type: SiteQuality
SIO_000300: 5.115e1

DP
type: SiteQuality
SIO_000300: 2.530552e6

VQSLOD
type: SiteQuality
SIO_000300: -1.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 621
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7938
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9685
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9299
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.514218e6

MQ
type: SiteQuality
SIO_000300: 4.992e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

QD
type: SiteQuality
SIO_000300: 2.384e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.27e-1

FS
type: SiteQuality
SIO_000300: 2.359e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.094e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.685e-1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.116312537035469e-5
allele num: 47252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7924
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9301
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.126e0

DP
type: SiteQuality
SIO_000300: 2.507622e6

VQSLOD
type: SiteQuality
SIO_000300: -1.856e0

MQRankSum
type: SiteQuality
SIO_000300: -7.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.006e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

QD
type: SiteQuality
SIO_000300: 4.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7889
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6619
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.075500107550011e-4
allele num: 9298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47166
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.05e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.673e0

FS
type: SiteQuality
SIO_000300: 7.984e0

MQ
type: SiteQuality
SIO_000300: 4.875e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.42e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

DP
type: SiteQuality
SIO_000300: 2.500023e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

QD
type: SiteQuality
SIO_000300: 1.117e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 615
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.120171309841835e-5
allele num: 47166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7889
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.42e-2

FS
type: SiteQuality
SIO_000300: 7.984e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.05e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.673e0

MQRankSum
type: SiteQuality
SIO_000300: 5.22e-1

MQ
type: SiteQuality
SIO_000300: 4.875e1

DP
type: SiteQuality
SIO_000300: 2.500023e6

QD
type: SiteQuality
SIO_000300: 1.117e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9061
num of homozygotes: 0

European (Finnish)
type: Population
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Latino
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African
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allele num: 7856
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European (Non-Finnish)
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Other
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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DP
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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allele num: 4528
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Latino
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Other
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MQRankSum
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MQ
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QD
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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FS
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ClippingRankSum
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DP
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ReadPosRankSum
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European (Finnish)
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East Asian
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Other
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European (Non-Finnish)
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Latino
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South Asian
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FS
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QD
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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DP
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InbreedingCoeff
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VQSLOD
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European (Finnish)
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African
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East Asian
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Latino
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South Asian
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Other
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InbreedingCoeff
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FS
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MQ
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VQSLOD
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QD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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DP
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ReadPosRankSum
type: SiteQuality
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Latino
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East Asian
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Other
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European (Finnish)
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African
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South Asian
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MQ
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BaseQRankSum
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MQRankSum
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ClippingRankSum
type: SiteQuality
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QD
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DP
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FS
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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East Asian
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African
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Latino
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European (Finnish)
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South Asian
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Other
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FS
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InbreedingCoeff
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QD
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DP
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VQSLOD
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MQ
type: SiteQuality
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African
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East Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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Other
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
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QD
type: SiteQuality
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Other
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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MQ
type: SiteQuality
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QD
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MQRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.01e-1

DP
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European (Finnish)
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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African
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QD
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DP
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InbreedingCoeff
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FS
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MQ
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VQSLOD
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African
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South Asian
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European (Non-Finnish)
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Other
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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FS
type: SiteQuality
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QD
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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MQ
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MQRankSum
type: SiteQuality
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DP
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Latino
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allele frequency: 2.157497303128371e-4
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South Asian
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East Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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MQRankSum
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DP
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FS
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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QD
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ReadPosRankSum
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VQSLOD
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European (Finnish)
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South Asian
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African
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East Asian
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Other
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European (Non-Finnish)
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allele frequency: 6.574477876881944e-5
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DP
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QD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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FS
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ClippingRankSum
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MQRankSum
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European (Non-Finnish)
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Latino
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African
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European (Finnish)
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South Asian
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Other
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MQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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ReadPosRankSum
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DP
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BaseQRankSum
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ClippingRankSum
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MQ
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QD
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South Asian
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African
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Latino
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European (Finnish)
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East Asian
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European (Non-Finnish)
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allele frequency: 8.80126738250308e-5
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VQSLOD
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ClippingRankSum
type: SiteQuality
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MQRankSum
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MQ
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InbreedingCoeff
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FS
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QD
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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South Asian
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African
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Other
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European (Finnish)
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European (Non-Finnish)
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Latino
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ClippingRankSum
type: SiteQuality
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MQRankSum
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FS
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DP
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InbreedingCoeff
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MQ
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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QD
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South Asian
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East Asian
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European (Finnish)
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African
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European (Non-Finnish)
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Other
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BaseQRankSum
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FS
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MQRankSum
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QD
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DP
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MQ
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.550902847014512e-4
allele num: 45135
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 6557
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 7337
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6356
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European (Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.48e-1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.475e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.38949e6

QD
type: SiteQuality
SIO_000300: 1.57e1

MQ
type: SiteQuality
SIO_000300: 4.946e1

Other
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allele frequency: 0.0e0
allele num: 430
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Latino
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allele frequency: 0.0e0
allele num: 8009
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East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 7398
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3546
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European (Non-Finnish)
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allele frequency: 2.646833064238639e-5
allele num: 37781
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 4.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.53e-1

European (Non-Finnish)
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allele frequency: 2.539618041446566e-5
allele num: 39376
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 7569
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4180
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3666
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 467
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East Asian
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allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.057913e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

QD
type: SiteQuality
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Other
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allele frequency: 0.0e0
allele num: 498
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South Asian
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allele frequency: 0.0e0
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East Asian
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 3836
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European (Non-Finnish)
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allele frequency: 2.409290223100275e-5
allele num: 41506
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.132e0

QD
type: SiteQuality
SIO_000300: 1.816e1

MQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.43e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.153238e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 0.0e0
allele num: 6126
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4705
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8617
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3865
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

FS
type: SiteQuality
SIO_000300: 1.093e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.169999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.9e-1

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.161807e6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6281
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4013
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 511
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Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
type: Population
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.006e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.387e1

ReadPosRankSum
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SIO_000300: -1.006e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.97e-1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 511
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6281
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5141
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 43018
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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DP
type: SiteQuality
SIO_000300: 1.210815e6

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.387e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.006e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6298
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4050
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Latino
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allele count: 0
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African
type: Population
allele count: 0
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Other
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South Asian
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DP
type: SiteQuality
SIO_000300: 1.21985e6

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.571e0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 515
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European (Non-Finnish)
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allele count: 8
allele frequency: 1.837390904915021e-4
allele num: 43540
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South Asian
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allele frequency: 9.359790340696368e-4
allele num: 5342
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African
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allele frequency: 0.0e0
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Latino
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FS
type: SiteQuality
SIO_000300: 1.346e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.04e-2

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
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Latino
type: Population
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Other
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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Other
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African
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allele frequency: 1.229256299938537e-4
allele num: 8135
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 10
allele frequency: 2.238388360380526e-4
allele num: 44675
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East Asian
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
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MQRankSum
type: SiteQuality
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FS
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InbreedingCoeff
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BaseQRankSum
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MQ
type: SiteQuality
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DP
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East Asian
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allele count: 4
allele frequency: 6.207324643078833e-4
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African
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European (Non-Finnish)
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allele count: 0
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Latino
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Other
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European (Finnish)
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MQRankSum
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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DP
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QD
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VQSLOD
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MQ
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FS
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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European (Finnish)
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Other
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African
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Latino
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East Asian
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allele frequency: 2.293227335269836e-3
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European (Non-Finnish)
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MQRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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DP
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BaseQRankSum
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FS
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ClippingRankSum
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QD
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VQSLOD
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South Asian
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East Asian
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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allele frequency: 2.161087459209474e-5
allele num: 46273
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FS
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DP
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InbreedingCoeff
type: SiteQuality
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MQ
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 3.83e-1

Latino
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African
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European (Non-Finnish)
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South Asian
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Other
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European (Finnish)
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QD
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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ReadPosRankSum
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MQ
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BaseQRankSum
type: SiteQuality
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DP
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SIO_000300: 1.343819e6

Latino
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East Asian
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African
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European (Non-Finnish)
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South Asian
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Other
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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FS
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DP
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MQ
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.39e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.34e-1

QD
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SIO_000300: 1.915e1

VQSLOD
type: SiteQuality
SIO_000300: -1.147e0

East Asian
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Latino
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South Asian
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African
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European (Finnish)
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Other
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DP
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.049e0

FS
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SIO_000300: 5.259e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-2

QD
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MQ
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SIO_000300: 5.939e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-2

South Asian
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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Latino
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VQSLOD
type: SiteQuality
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FS
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MQ
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DP
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-2

European (Non-Finnish)
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allele frequency: 4.292490288240723e-5
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European (Finnish)
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South Asian
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African
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allele frequency: 6.127598221795026e-3
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Latino
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East Asian
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.61e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
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MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

VQSLOD
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FS
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.834e-1

DP
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SIO_000300: 1.350588e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.953e0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4316
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African
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East Asian
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.145508378210217e-5
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South Asian
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Latino
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.767e1

FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.062e0

MQRankSum
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.71e-1

DP
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SIO_000300: 1.348073e6

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.15973392078096e-5
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African
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South Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4276
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Other
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allele num: 598
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MQRankSum
type: SiteQuality
SIO_000300: 9.63e-1

FS
type: SiteQuality
SIO_000300: 1.189e0

VQSLOD
type: SiteQuality
SIO_000300: -2.906e0

MQ
type: SiteQuality
SIO_000300: 3.677e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.927e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

QD
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SIO_000300: 1.408e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.128e0

DP
type: SiteQuality
SIO_000300: 1.298179e6

East Asian
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Latino
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Other
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.167410811045125e-5
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African
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South Asian
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.67e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.304e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.914e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
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MQ
type: SiteQuality
SIO_000300: 5.883e1

DP
type: SiteQuality
SIO_000300: 1.278233e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.142e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4250
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.177463255307567e-5
allele num: 45925
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Latino
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African
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South Asian
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Other
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allele num: 590
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FS
type: SiteQuality
SIO_000300: 7.016e0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.82e-2

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.258794e6

European (Finnish)
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African
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Latino
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East Asian
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allele frequency: 0.0e0
allele num: 6432
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 45624
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South Asian
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allele frequency: 1.061007957559682e-4
allele num: 9425
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FS
type: SiteQuality
SIO_000300: 2.868e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.252361e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

QD
type: SiteQuality
SIO_000300: 2.235e1

African
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allele count: 0
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East Asian
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allele count: 1
allele frequency: 1.551349674216568e-4
allele num: 6446
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4246
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 45765
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South Asian
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DP
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.83e0

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

African
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
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Latino
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Other
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allele num: 594
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.1899568578499e-5
allele num: 45663
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QD
type: SiteQuality
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FS
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VQSLOD
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MQ
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InbreedingCoeff
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DP
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European (Non-Finnish)
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allele frequency: 2.193463478833077e-5
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South Asian
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African
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East Asian
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9036
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European (Finnish)
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BaseQRankSum
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VQSLOD
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QD
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DP
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-1

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 9.506707510298934e-4
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Latino
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African
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Other
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allele num: 594
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East Asian
type: Population
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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QD
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MQ
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.12e-2

South Asian
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allele count: 0
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Latino
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allele frequency: 1.106194690265487e-4
allele num: 9040
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European (Non-Finnish)
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allele num: 45636
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African
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East Asian
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Other
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allele num: 594
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.78e-1

VQSLOD
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MQ
type: SiteQuality
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MQRankSum
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DP
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BaseQRankSum
type: SiteQuality
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African
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South Asian
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.188854353631309e-5
allele num: 45686
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East Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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QD
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MQRankSum
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VQSLOD
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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East Asian
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num of homozygotes: 0

European (Finnish)
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Other
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African
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.186365822729459e-5
allele num: 45738
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DP
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
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FS
type: SiteQuality
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QD
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ClippingRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.84e-1

European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 1.101442890186144e-4
allele num: 9079
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South Asian
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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BaseQRankSum
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QD
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.298484e6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 598
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.340371969877818e-5
allele num: 46079
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9098
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8239
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.64e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.235e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-1

FS
type: SiteQuality
SIO_000300: 1.782e0

DP
type: SiteQuality
SIO_000300: 1.310976e6

QD
type: SiteQuality
SIO_000300: 1.829e1

South Asian
type: Population
allele count: 1
allele frequency: 1.029866117404737e-4
allele num: 9710
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4352
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9135
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.545833977430824e-4
allele num: 6469
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.45e-2

FS
type: SiteQuality
SIO_000300: 6.099e0

MQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

DP
type: SiteQuality
SIO_000300: 1.331434e6

MQ
type: SiteQuality
SIO_000300: 5.917e1

VQSLOD
type: SiteQuality
SIO_000300: -1.203e0

QD
type: SiteQuality
SIO_000300: 1.853e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6469
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8276
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9135
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 6.893382352941177e-4
allele num: 4352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.45e-2

FS
type: SiteQuality
SIO_000300: 6.099e0

VQSLOD
type: SiteQuality
SIO_000300: -1.203e0

QD
type: SiteQuality
SIO_000300: 1.853e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.1e-1

DP
type: SiteQuality
SIO_000300: 1.331434e6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6489
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8295
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.148458481039854e-5
allele num: 46545
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 609
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4384
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.188e1

VQSLOD
type: SiteQuality
SIO_000300: 5.22e-1

DP
type: SiteQuality
SIO_000300: 1.35341e6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 609
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6503
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46717
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.202501202501203e-4
allele num: 8316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9785
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VQSLOD
type: SiteQuality
SIO_000300: -1.718e0

MQRankSum
type: SiteQuality
SIO_000300: -6.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.321e0

DP
type: SiteQuality
SIO_000300: 1.369496e6

MQ
type: SiteQuality
SIO_000300: 5.945e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.844e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.96e-1

FS
type: SiteQuality
SIO_000300: 6.694e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

QD
type: SiteQuality
SIO_000300: 2.137e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9187
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.201778632375916e-4
allele num: 8321
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9789
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46768
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.262e1

VQSLOD
type: SiteQuality
SIO_000300: -2.365e0

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.237e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.26e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

DP
type: SiteQuality
SIO_000300: 1.370561e6

East Asian
type: Population
allele count: 1
allele frequency: 1.530456075910621e-4
allele num: 6534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8357
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47029
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 613
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.305e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.33e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
type: SiteQuality
SIO_000300: -3.898e-1

DP
type: SiteQuality
SIO_000300: 1.395184e6

QD
type: SiteQuality
SIO_000300: 8.82e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9955
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 617
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8409
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4491
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
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QD
type: SiteQuality
SIO_000300: 9.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

FS
type: SiteQuality
SIO_000300: 4.178e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.93e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.95e-1

DP
type: SiteQuality
SIO_000300: 1.435384e6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9285
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6591
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.841e0

FS
type: SiteQuality
SIO_000300: 4.312e0

QD
type: SiteQuality
SIO_000300: 1.198e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.457161e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.61e-1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.091350175673415e-5
allele num: 47816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9295
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.25e-2

DP
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.402e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10103
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47884
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9303
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MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 3.984e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.45e0

QD
type: SiteQuality
SIO_000300: 3.27e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.472146e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.83e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10104
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East Asian
type: Population
allele count: 0
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allele num: 6616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 631
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.087987806151212e-5
allele num: 47893
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.472779e6

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.96e1

European (Non-Finnish)
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allele count: 6
allele frequency: 1.251460036709494e-4
allele num: 47944
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8492
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

East Asian
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allele count: 0
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Other
type: Population
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QD
type: SiteQuality
SIO_000300: 2.616e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.599e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.981e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.6e0

VQSLOD
type: SiteQuality
SIO_000300: 5.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

FS
type: SiteQuality
SIO_000300: 3.264e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

DP
type: SiteQuality
SIO_000300: 1.476762e6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47977
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
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South Asian
type: Population
allele count: 1
allele frequency: 9.879470460383324e-5
allele num: 10122
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InbreedingCoeff
type: SiteQuality
SIO_000300: 7.84e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.4794e6

QD
type: SiteQuality
SIO_000300: 3.336e1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8509
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
type: Population
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allele num: 6636
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South Asian
type: Population
allele count: 0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.268e1

VQSLOD
type: SiteQuality
SIO_000300: -1.951e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.790000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.47975e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-1

Latino
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allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

East Asian
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allele count: 0
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South Asian
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allele count: 0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.084245190604223e-5
allele num: 47979
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.65e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

DP
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.028e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e0

VQSLOD
type: SiteQuality
SIO_000300: 1.78e-1

FS
type: SiteQuality
SIO_000300: 6.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.94e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084288632289799e-5
allele num: 47978
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.479988e6

MQ
type: SiteQuality
SIO_000300: 5.991e1

FS
type: SiteQuality
SIO_000300: 4.984e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.15e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.4e0

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

QD
type: SiteQuality
SIO_000300: 1.224e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.557e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47981
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.175226231049477e-4
allele num: 8509
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.99e1

VQSLOD
type: SiteQuality
SIO_000300: 3.76e-1

QD
type: SiteQuality
SIO_000300: 1.334e1

FS
type: SiteQuality
SIO_000300: 2.953e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.499e0

DP
type: SiteQuality
SIO_000300: 1.479957e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.89e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.315e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47971
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-2

DP
type: SiteQuality
SIO_000300: 1.479243e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 3.139e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.2e0