X-79947595-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079947595
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079947595
    reference: chr 0
allele count: 8
allele frequency: 9.402141337689658e-5
allele num: 85087
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1454A>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3318A>G
  hgvsp: ENST00000373275.4:c.3318A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 259
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2398
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1536
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1115
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro1106Pro
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9230
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

X-79947643-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079947643
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079947643
    reference: chr 0
allele count: 1
allele frequency: 1.170110692471508e-5
allele num: 85462
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3270C>T
  hgvsp: ENST00000373275.4:c.3270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1406C>T
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1987
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 449
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 164
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 67
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genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp1090Asp
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4462
  num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS

X-79947661-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079947661
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079947661
    reference: chr 0
allele count: 1
allele frequency: 1.187733092619427e-5
allele num: 84194
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3264-12A>C
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1400-12A>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1206
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genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.184407697852727e-5
  allele num: 45779
  num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

X-79947661-TAAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079947661
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079947658
    reference: chr 0
allele count: 7
allele frequency: 8.314131648335986e-5
allele num: 84194
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1400-15_1400-13delCTT
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3264-15_3264-13delCTT
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25029
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9676
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6622
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7286
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 184
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genotype quality: GenotypeQuality
  all individuals: 30214
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genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1991
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7992
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: TAAG
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

X-79947662-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079947662
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079947662
    reference: chr 0
allele count: 1
allele frequency: 1.190830604346532e-5
allele num: 83975
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3264-13T>C
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1400-13T>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
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population: East Asian
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population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
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X-79947670-G-T
type: Variant
location: Region
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    reference: chr 0
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    type: ExactPosition
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allele count: 1
allele frequency: 1.196129325502673e-5
allele num: 83603
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
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  ensembl gene: ENSG00000165288
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  gene symbol: BRWD3
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  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3264-21C>A
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
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population: East Asian
population: Other
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population: European (Finnish)
population: Latino
population: South Asian
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site quality: InbreedingCoeff
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X-79947671-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079947671
    reference: chr 0
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    type: ExactPosition
    position: 24079947671
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allele count: 5
allele frequency: 5.987163521410097e-5
allele num: 83512
alternate allele: T
annotation: Annotation
  canonical: true
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  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3264-22G>A
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000165288
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  hgvsc: ENST00000473691.1:n.1400-22G>A
  variant of: http://identifiers.org/hgnc/17342
canonical: true
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genotype depth: GenotypeDepth
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population: South Asian
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population: Other
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X-79947677-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079947677
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079947677
    reference: chr 0
allele count: 1
allele frequency: 1.201590906360021e-5
allele num: 83223
alternate allele: G
annotation: Annotation
  canonical: true
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  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3264-28T>C
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1400-28T>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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X-79947680-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079947680
    reference: chr 0
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    type: ExactPosition
    position: 24079947680
    reference: chr 0
allele count: 3
allele frequency: 3.611803373424351e-5
allele num: 83061
alternate allele: C
annotation: Annotation
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  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3264-31A>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
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  ensembl gene: ENSG00000165288
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  gene symbol: BRWD3
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  variant of: http://identifiers.org/hgnc/17342
canonical: true
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4373
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS

X-79947684-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079947684
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079947684
    reference: chr 0
allele count: 1
allele frequency: 1.208663701411719e-5
allele num: 82736
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1400-35A>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3264-35A>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
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  allele frequency: 0.0e0
  allele num: 6413
  num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: QD

X-79947692-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079947692
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079947692
    reference: chr 0
allele count: 1
allele frequency: 1.219541940047318e-5
allele num: 81998
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1400-43A>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3264-43A>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
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  allele frequency: 0.0e0
  allele num: 44299
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

X-79947697-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079947697
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079947697
    reference: chr 0
allele count: 1
allele frequency: 1.232134056185313e-5
allele num: 81160
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1400-48G>A
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3264-48G>A
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
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genotype depth: GenotypeDepth
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  allele num: 593
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population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
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site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
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X-79948417-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079948417
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079948417
    reference: chr 0
allele count: 2
allele frequency: 2.289691807482713e-5
allele num: 87348
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3263+22T>C
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1399+22T>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4526
  num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

X-79948426-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079948426
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079948426
    reference: chr 0
allele count: 1
allele frequency: 1.143301397114307e-5
allele num: 87466
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3263+13A>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1399+13A>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 559
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
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  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8480
  num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

X-79948440-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079948440
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079948440
    reference: chr 0
allele count: 2
allele frequency: 2.283417819792666e-5
allele num: 87588
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3262C>T
  hgvsp: ENSP00000362372.4:p.His1088Tyr
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1398C>T
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2916
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  variant carriers: 0
hgvs: p.His1088Tyr
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: FS

X-79948443-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079948443
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079948443
    reference: chr 0
allele count: 1
allele frequency: 1.141656772307973e-5
allele num: 87592
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1395G>A
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3259G>A
  hgvsp: ENSP00000362372.4:p.Val1087Ile
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Val1087Ile
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8488
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

X-79948453-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079948453
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079948453
    reference: chr 0
allele count: 1
allele frequency: 1.141187748208335e-5
allele num: 87628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1385G>A
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3249G>A
  hgvsp: ENST00000373275.4:c.3249G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gln1083Gln
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6635
  num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

X-79948496-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079948496
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079948496
    reference: chr 0
allele count: 1
allele frequency: 1.140823218034133e-5
allele num: 87656
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3206G>T
  hgvsp: ENSP00000362372.4:p.Ser1069Ile
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1342G>T
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2125
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser1069Ile
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4530
  num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD

X-79948496-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079948496
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079948496
    reference: chr 0
allele count: 2
allele frequency: 2.281646436068267e-5
allele num: 87656
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3206G>A
  hgvsp: ENSP00000362372.4:p.Ser1069Asn
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1342G>A
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 11
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  variant carriers: 0
hgvs: p.Ser1069Asn
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9309
  num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

X-79948505-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079948505
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079948505
    reference: chr 0
allele count: 3
allele frequency: 3.423133536439257e-5
allele num: 87639
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3197C>T
  hgvsp: ENSP00000362372.4:p.Thr1066Ile
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1333C>T
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Thr1066Ile
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 631
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

X-79948522-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079948522
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079948522
    reference: chr 0
allele count: 1
allele frequency: 1.141643738654915e-5
allele num: 87593
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1316C>T
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3180C>T
  hgvsp: ENST00000373275.4:c.3180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 18
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hgvs: p.Asp1060Asp
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 47921
  num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ

X-79948538-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079948538
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079948538
    reference: chr 0
allele count: 2
allele frequency: 2.286001668781218e-5
allele num: 87489
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1300G>A
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3164G>A
  hgvsp: ENSP00000362372.4:p.Arg1055His
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg1055His
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4529
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

X-79948539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079948539
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079948539
    reference: chr 0
allele count: 1
allele frequency: 1.143040029261825e-5
allele num: 87486
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1299C>T
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3163C>T
  hgvsp: ENSP00000362372.4:p.Arg1055Cys
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg1055Cys
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8455
  num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

X-79948549-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079948549
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079948549
    reference: chr 0
allele count: 1
allele frequency: 1.145186779963812e-5
allele num: 87322
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3153T>C
  hgvsp: ENST00000373275.4:c.3153T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1289T>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.3153T>C
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS

X-79948591-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079948591
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079948591
    reference: chr 0
allele count: 1
allele frequency: 1.158815690364448e-5
allele num: 86295
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3152-41A>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1288-41A>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9870
  num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS

X-79951380-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951380
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951380
    reference: chr 0
allele count: 1
allele frequency: 1.487121527571233e-5
allele num: 67244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1287+27C>T
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3151+27C>T
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 34960
  num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

X-79951390-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951390
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951390
    reference: chr 0
allele count: 3
allele frequency: 4.274052228918238e-5
allele num: 70191
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1287+17T>C
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3151+17T>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 36793
  num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

X-79951399-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951399
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951399
    reference: chr 0
allele count: 2
allele frequency: 2.734407043832545e-5
allele num: 73142
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1287+8T>C
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3151+8T>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.3151+8T>C
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7756
  num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD

X-79951408-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951408
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951408
    reference: chr 0
allele count: 1
allele frequency: 1.305227435880702e-5
allele num: 76615
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3150T>G
  hgvsp: ENSP00000362372.4:p.Ile1050Met
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1286T>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ile1050Met
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

X-79951435-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951435
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951435
    reference: chr 0
allele count: 1
allele frequency: 1.224829748664936e-5
allele num: 81644
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3123T>C
  hgvsp: ENST00000373275.4:c.3123T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1259T>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 6317
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn1041Asn
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4349
  num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

X-79951439-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951439
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951439
    reference: chr 0
allele count: 1
allele frequency: 1.220941590154327e-5
allele num: 81904
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3119A>G
  hgvsp: ENSP00000362372.4:p.Tyr1040Cys
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1255A>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3723
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Tyr1040Cys
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4362
  num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

X-79951450-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951450
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951450
    reference: chr 0
allele count: 1
allele frequency: 1.216056814174358e-5
allele num: 82233
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1244A>C
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3108A>C
  hgvsp: ENST00000373275.4:c.3108A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36516
  bin: 2.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 383
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  variant carriers: 0
hgvs: p.Leu1036Leu
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 589
  num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

X-79951452-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951452
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951452
    reference: chr 0
allele count: 3
allele frequency: 3.65141187925998e-5
allele num: 82160
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1242C>T
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3106C>T
  hgvsp: ENST00000373275.4:c.3106C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu1036Leu
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8235
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-79951474-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951474
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951474
    reference: chr 0
allele count: 20
allele frequency: 2.483022334785901e-4
allele num: 80547
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1220G>A
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3084G>A
  hgvsp: ENST00000373275.4:c.3084G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro1028Pro
num of homozygotes: 0
population: Other
  type: Population
  allele count: 1
  allele frequency: 1.739130434782609e-3
  allele num: 575
  num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

X-79951475-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951475
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951475
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 80228
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3083C>T
  hgvsp: ENSP00000362372.4:p.Pro1028Leu
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1219C>T
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9836
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 429
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro1028Leu
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8806
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

X-79951510-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951510
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951510
    reference: chr 0
allele count: 2
allele frequency: 2.76989128176719e-5
allele num: 72205
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1205-21T>C
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3069-21T>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10936
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5816
  num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-79951512-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951512
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951512
    reference: chr 0
allele count: 1
allele frequency: 1.384753860001385e-5
allele num: 72215
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3069-23T>A
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1205-23T>A
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7463
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

X-79951513-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951513
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951513
    reference: chr 0
allele count: 2
allele frequency: 2.771887516804568e-5
allele num: 72153
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3069-24A>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1205-24A>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17773
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7456
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ

X-79951531-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951531
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951531
    reference: chr 0
allele count: 161
allele frequency: 2.461924276714172e-3
allele num: 65396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1205-42A>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3069-42A>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 36
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 123
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 2452
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 2
population: South Asian
  type: Population
  allele count: 3
  allele frequency: 3.976143141153082e-4
  allele num: 7545
  num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

X-79951535-AAT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079951535
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079951533
    reference: chr 0
allele count: 1
allele frequency: 1.570795765134617e-5
allele num: 63662
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1205-48_1205-47delAT
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3069-48_3069-47delAT
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5138
  num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: AAT
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP

X-79952187-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952187
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952187
    reference: chr 0
allele count: 3
allele frequency: 3.497563364189614e-5
allele num: 85774
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1204+51A>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3068+51A>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 299
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4482
  num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

X-79952190-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952190
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952190
    reference: chr 0
allele count: 1
allele frequency: 1.166439211020518e-5
allele num: 85731
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1204+48C>A
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3068+48C>A
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8394
  num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

X-79952193-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952193
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952193
    reference: chr 0
allele count: 2
allele frequency: 2.33140992014921e-5
allele num: 85785
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1204+45A>C
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3068+45A>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 15551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1826
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2330
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8397
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP

X-79952202-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952202
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952202
    reference: chr 0
allele count: 1
allele frequency: 1.165528333993799e-5
allele num: 85798
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1204+36T>A
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3068+36T>A
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 504
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1784
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4484
  num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

X-79952205-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952205
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952205
    reference: chr 0
allele count: 10
allele frequency: 1.165868047054434e-4
allele num: 85773
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1204+33G>C
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3068+33G>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 494
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9247
  num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

X-79952208-TCAAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952208
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952204
    reference: chr 0
allele count: 43
allele frequency: 5.009669827807162e-4
allele num: 85834
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3068+26_3068+29delTTTG
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1204+26_1204+29delTTTG
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
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  variant carriers: 5
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 31
genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 1.189202045427518e-4
  allele num: 8409
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: TCAAA
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum

X-79952213-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952213
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952213
    reference: chr 0
allele count: 2
allele frequency: 2.332252722905054e-5
allele num: 85754
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1204+25G>C
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3068+25G>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7737
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9759
  num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-79952215-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952215
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952215
    reference: chr 0
allele count: 1
allele frequency: 1.165229550221394e-5
allele num: 85820
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1204+23C>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3068+23C>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19065
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 300
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4488
  num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

X-79952226-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952226
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952226
    reference: chr 0
allele count: 22
allele frequency: 2.562728607040514e-4
allele num: 85846
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1204+12T>C
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3068+12T>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 333
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  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6551
  num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

X-79952303-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952303
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952303
    reference: chr 0
allele count: 3
allele frequency: 3.596173671213829e-5
allele num: 83422
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1139C>T
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.3003C>T
  hgvsp: ENST00000373275.4:c.3003C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Cys1001Cys
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9475
  num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-79952308-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952308
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952308
    reference: chr 0
allele count: 1
allele frequency: 1.207379503525548e-5
allele num: 82824
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1134C>T
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2998C>T
  hgvsp: ENST00000373275.4:c.2998C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu1000Leu
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8251
  num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

X-79952330-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952330
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952330
    reference: chr 0
allele count: 1
allele frequency: 1.256139381225741e-5
allele num: 79609
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1112A>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2976A>G
  hgvsp: ENST00000373275.4:c.2976A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Lys992Lys
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 586
  num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-79952355-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952355
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952355
    reference: chr 0
allele count: 1
allele frequency: 1.349108913562592e-5
allele num: 74123
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2951A>C
  hgvsp: ENSP00000362372.4:p.Glu984Ala
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1087A>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Glu984Ala
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7814
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS

X-79952394-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952394
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952394
    reference: chr 0
allele count: 1
allele frequency: 2.128474735004895e-5
allele num: 46982
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2944-32A>C
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1080-32A>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 24088
  num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

X-79952413-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079952413
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079952414
    reference: chr 0
allele count: 3
allele frequency: 8.908685968819599e-5
allele num: 33675
alternate allele: AT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2944-52dupA
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1080-52dupA
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1400
  num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

X-79955409-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955409
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955409
    reference: chr 0
allele count: 1
allele frequency: 2.398771828823642e-5
allele num: 41688
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2943+47A>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1079+47A>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
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  allele frequency: 0.0e0
  allele num: 5641
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

X-79955415-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955415
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955415
    reference: chr 0
allele count: 1
allele frequency: 2.38004569687738e-5
allele num: 42016
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1079+41T>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2943+41T>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
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  allele num: 5684
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population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
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site quality: DP
site quality: QD
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X-79955418-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955418
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955418
    reference: chr 0
allele count: 1
allele frequency: 2.357156326607581e-5
allele num: 42424
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
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  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1079+38A>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2943+38A>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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population: Other
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  allele num: 327
  num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
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site quality: FS
site quality: QD
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X-79955423-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955423
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955423
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 42915
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1079+33G>A
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2943+33G>A
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: South Asian
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  allele num: 6221
  num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
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site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
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X-79955434-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955434
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955434
    reference: chr 0
allele count: 1
allele frequency: 2.166565560273854e-5
allele num: 46156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1079+22G>T
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2943+22G>T
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3790
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6035
  num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

X-79955443-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955443
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955443
    reference: chr 0
allele count: 1
allele frequency: 1.996127512625506e-5
allele num: 50097
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2943+13A>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1079+13A>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4485
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2596
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

X-79955476-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955476
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955476
    reference: chr 0
allele count: 1
allele frequency: 1.531463926367214e-5
allele num: 65297
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2923T>C
  hgvsp: ENSP00000362372.4:p.Trp975Arg
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1059T>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 1
hgvs: p.Trp975Arg
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 1
  allele frequency: 1.853911753800519e-4
  allele num: 5394
  num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

X-79955504-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955504
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955504
    reference: chr 0
allele count: 1
allele frequency: 1.374759417102007e-5
allele num: 72740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1031A>T
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2895A>T
  hgvsp: ENST00000373275.4:c.2895A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3788
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  variant carriers: 0
hgvs: p.Ile965Ile
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3766
  num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD

X-79955510-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955510
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955510
    reference: chr 0
allele count: 1
allele frequency: 1.359249694168819e-5
allele num: 73570
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1025G>A
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2889G>A
  hgvsp: ENST00000373275.4:c.2889G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ser963Ser
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.568911038610733e-5
  allele num: 38927
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

X-79955524-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955524
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955524
    reference: chr 0
allele count: 1
allele frequency: 1.341669573617409e-5
allele num: 74534
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.1011G>T
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2875G>T
  hgvsp: ENSP00000362372.4:p.Ala959Ser
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 616
  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala959Ser
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 39528
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

X-79955543-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955543
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955543
    reference: chr 0
allele count: 4
allele frequency: 5.478851632697787e-5
allele num: 73008
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.992A>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2856A>G
  hgvsp: ENST00000373275.4:c.2856A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16812
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31862
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly952Gly
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 38541
  num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

X-79955567-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955567
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955567
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 65886
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.972-4T>G
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2836-4T>G
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2845
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
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  variant carriers: 0
hgvs: c.2836-4T>G
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5372
  num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ

X-79955581-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955581
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955581
    reference: chr 0
allele count: 2
allele frequency: 3.240493203065506e-5
allele num: 61719
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2836-18T>A
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.972-18T>A
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16517
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 459
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum

X-79955582-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955582
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955582
    reference: chr 0
allele count: 1
allele frequency: 1.630895687911801e-5
allele num: 61316
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2836-19C>T
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.972-19C>T
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 31612
  num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
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site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
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site quality: ClippingRankSum

X-79955584-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079955584
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079955584
    reference: chr 0
allele count: 7
allele frequency: 1.155210825975741e-4
allele num: 60595
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.972-21A>T
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2836-21A>T
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
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  allele count: 0
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  allele num: 6777
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

X-79958928-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079958928
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079958928
    reference: chr 0
allele count: 1
allele frequency: 4.365096686891614e-5
allele num: 22909
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.971+51C>T
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2835+51C>T
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  allele num: 1285
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population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

X-79958935-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079958935
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079958935
    reference: chr 0
allele count: 5
allele frequency: 2.17410209583442e-4
allele num: 22998
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.971+44G>A
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2835+44G>A
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 1
population: African
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  allele num: 3277
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
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site quality: DP

X-79958941-A-AGGCTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079958941
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079958946
    reference: chr 0
allele count: 4
allele frequency: 1.71174255391989e-4
allele num: 23368
alternate allele: AGGCTC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.971+33_971+37dupGAGCC
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2835+33_2835+37dupGAGCC
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5320
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
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  allele num: 11568
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population: Other
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population: Latino
population: African
population: European (Finnish)
population: East Asian
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site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
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site quality: InbreedingCoeff
site quality: MQ
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X-79958941-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
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    type: ExactPosition
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allele count: 0
allele frequency: 0.0e0
allele num: 23368
alternate allele: G
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000165288
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  gene symbol: BRWD3
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  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2835+38T>C
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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population: East Asian
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population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
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site quality: InbreedingCoeff
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site quality: ClippingRankSum
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X-79958944-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
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    type: ExactPosition
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allele count: 0
allele frequency: 0.0e0
allele num: 23784
alternate allele: T
annotation: Annotation
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  gene symbol: BRWD3
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  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
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  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2835+35G>A
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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population: European (Non-Finnish)
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population: Latino
population: African
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population: Other
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X-79958949-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079958949
    reference: chr 0
  end: Position
    type: ExactPosition
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allele count: 0
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allele num: 24596
alternate allele: T
annotation: Annotation
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  gene symbol: BRWD3
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  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
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  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.971+30G>A
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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site quality: QD
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X-79958951-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
  end: Position
    type: ExactPosition
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    reference: chr 0
allele count: 1
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allele num: 24931
alternate allele: A
annotation: Annotation
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  gene symbol: BRWD3
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  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/17342
canonical: true
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20046
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3051
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 12379
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

X-79958957-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24079958957
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24079958957
    reference: chr 0
allele count: 1
allele frequency: 3.756150696765955e-5
allele num: 26623
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl transcript: ENST00000473691
  gene symbol: BRWD3
  hgvsc: ENST00000473691.1:n.971+22C>A
  variant of: http://identifiers.org/hgnc/17342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165288
  ensembl protein: ENSP00000362372
  ensembl transcript: ENST00000373275
  gene symbol: BRWD3
  hgvsc: ENST00000373275.4:c.2835+22C>A
  variant of: http://identifiers.org/hgnc/17342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17601
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5166
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25801
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5646
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2258
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4447
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.244245365186015e-4
allele num: 8037
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.509076014314664e-4
allele num: 46386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9805
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

DP
type: SiteQuality
SIO_000300: 1.785161e6

QD
type: SiteQuality
SIO_000300: 1.773e1

FS
type: SiteQuality
SIO_000300: 6.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.99e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.362e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-3

MQ
type: SiteQuality
SIO_000300: 5.96e1

South Asian
type: Population
allele count: 1
allele frequency: 1.01667344448963e-4
allele num: 9836
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 617
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8082
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46645
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.663e1

VQSLOD
type: SiteQuality
SIO_000300: -2.015e-1

MQ
type: SiteQuality
SIO_000300: 5.915e1

DP
type: SiteQuality
SIO_000300: 1.784022e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7992
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9713
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 609
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9185
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.53e0

DP
type: SiteQuality
SIO_000300: 1.709509e6

MQRankSum
type: SiteQuality
SIO_000300: 4.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.41e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.45e-1

QD
type: SiteQuality
SIO_000300: 2.245e1

MQ
type: SiteQuality
SIO_000300: 5.728e1

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.310644618711636e-4
allele num: 45779
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.088731627653783e-4
allele num: 9185
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9713
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 609
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.41e-2

MQ
type: SiteQuality
SIO_000300: 5.728e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.45e-1

QD
type: SiteQuality
SIO_000300: 2.245e1

DP
type: SiteQuality
SIO_000300: 1.709509e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.75e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9692
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7984
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4408
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.090393632101189e-4
allele num: 9171
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45616
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.07e0

DP
type: SiteQuality
SIO_000300: 1.696662e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.87e-1

QD
type: SiteQuality
SIO_000300: 1.369e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.17e0

MQRankSum
type: SiteQuality
SIO_000300: 4.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.58e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.277904328018223e-4
allele num: 4390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9153
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.36e-2

DP
type: SiteQuality
SIO_000300: 1.666782e6

VQSLOD
type: SiteQuality
SIO_000300: -4.501e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

FS
type: SiteQuality
SIO_000300: 9.253e0

QD
type: SiteQuality
SIO_000300: 2.041e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.471e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.1e-2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7956
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9651
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.10370403072712e-4
allele num: 45302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 607
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9147
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.554e0

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

DP
type: SiteQuality
SIO_000300: 1.660329e6

MQ
type: SiteQuality
SIO_000300: 5.934e1

VQSLOD
type: SiteQuality
SIO_000300: -7.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.26e-2

FS
type: SiteQuality
SIO_000300: 5.643e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-3

QD
type: SiteQuality
SIO_000300: 2.049e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7933
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.216262937434897e-5
allele num: 45121
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.633721e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.67e-1

FS
type: SiteQuality
SIO_000300: 2.413e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.609e1

MQRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7917
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.665037435293595e-5
allele num: 45011
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 605
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9135
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.53e-1

DP
type: SiteQuality
SIO_000300: 1.621386e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.3e0

QD
type: SiteQuality
SIO_000300: 1.791e1

MQRankSum
type: SiteQuality
SIO_000300: 2.85e-1

FS
type: SiteQuality
SIO_000300: 2.744e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 605
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9111
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44806
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4359
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.047120418848168e-4
allele num: 9550
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQ
type: SiteQuality
SIO_000300: 5.932e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.603977e6

QD
type: SiteQuality
SIO_000300: 2.979e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4336
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.05496360375567e-4
allele num: 9479
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9065
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 599
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7855
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6365
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.787e0

MQRankSum
type: SiteQuality
SIO_000300: 5.81e-1

MQ
type: SiteQuality
SIO_000300: 5.905e1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 1.579497e6

QD
type: SiteQuality
SIO_000300: 1.325e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.284565475646532e-5
allele num: 43772
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9002
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9419
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.099e0

QD
type: SiteQuality
SIO_000300: 2.961e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.949e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.058e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.18e-1

DP
type: SiteQuality
SIO_000300: 1.573977e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

East Asian
type: Population
allele count: 2
allele frequency: 3.021604471974618e-4
allele num: 6619
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8473
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.001e0

FS
type: SiteQuality
SIO_000300: 1.146e0

DP
type: SiteQuality
SIO_000300: 2.274708e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.74e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e1

QD
type: SiteQuality
SIO_000300: 1.933e1

East Asian
type: Population
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Other
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Latino
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 2.090169930815375e-5
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South Asian
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MQRankSum
type: SiteQuality
SIO_000300: 5.77e-1

QD
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FS
type: SiteQuality
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.26e-1

MQ
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SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.281173e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.58e-2

Latino
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East Asian
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Other
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European (Finnish)
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allele num: 4529
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African
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South Asian
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European (Non-Finnish)
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VQSLOD
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InbreedingCoeff
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QD
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DP
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MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 0.0e0

East Asian
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allele frequency: 0.0e0
allele num: 6632
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.087246921310791e-5
allele num: 47910
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South Asian
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Latino
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 632
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4529
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FS
type: SiteQuality
SIO_000300: 1.683e0

VQSLOD
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e0

MQRankSum
type: SiteQuality
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QD
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DP
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
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African
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allele frequency: 1.177578897786152e-4
allele num: 8492
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Latino
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South Asian
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allele frequency: 0.0e0
allele num: 10105
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European (Non-Finnish)
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allele count: 0
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allele num: 47930
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Other
type: Population
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allele num: 632
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FS
type: SiteQuality
SIO_000300: 1.762e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.11e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -6.01e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

DP
type: SiteQuality
SIO_000300: 2.287021e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.474e0

African
type: Population
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allele num: 8497
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East Asian
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allele count: 0
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allele num: 6636
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Latino
type: Population
allele count: 0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.085592725452574e-5
allele num: 47948
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South Asian
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allele count: 0
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.91e-1

DP
type: SiteQuality
SIO_000300: 2.288696e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.925e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-2

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.98e1

MQRankSum
type: SiteQuality
SIO_000300: 5.04e-1

FS
type: SiteQuality
SIO_000300: 7.561e0

QD
type: SiteQuality
SIO_000300: 1.942e1

African
type: Population
allele count: 0
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allele num: 8497
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.171185450905147e-5
allele num: 47948
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Other
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South Asian
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allele count: 0
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allele num: 10105
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.91e-1

FS
type: SiteQuality
SIO_000300: 7.561e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.99e-1

QD
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SIO_000300: 1.942e1

DP
type: SiteQuality
SIO_000300: 2.288696e6

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -7.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.04e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.257952815035774e-5
allele num: 47939
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South Asian
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East Asian
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BaseQRankSum
type: SiteQuality
SIO_000300: -6.622e0

FS
type: SiteQuality
SIO_000300: 6.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.348e0

MQRankSum
type: SiteQuality
SIO_000300: -6.25e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.94e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.859999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 2.178e1

African
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allele count: 0
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allele num: 8484
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South Asian
type: Population
allele count: 1
allele frequency: 9.909820632246556e-5
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9305
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.08e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.28747e6

VQSLOD
type: SiteQuality
SIO_000300: 2.77e-1

QD
type: SiteQuality
SIO_000300: 2.944e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

European (Non-Finnish)
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allele count: 1
allele frequency: 2.088772845953003e-5
allele num: 47875
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.182732111176818e-4
allele num: 8455
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
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Other
type: Population
allele count: 0
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allele num: 632
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.075e0

FS
type: SiteQuality
SIO_000300: 5.139e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-2

DP
type: SiteQuality
SIO_000300: 2.284788e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.04e0

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

QD
type: SiteQuality
SIO_000300: 2.171e1

East Asian
type: Population
allele count: 0
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allele num: 6622
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Other
type: Population
allele count: 0
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allele num: 632
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.088816476584367e-5
allele num: 47874
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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Latino
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allele count: 0
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MQRankSum
type: SiteQuality
SIO_000300: 4.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

FS
type: SiteQuality
SIO_000300: 3.741e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

Other
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allele count: 0
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African
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East Asian
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Latino
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European (Finnish)
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allele frequency: 0.0e0
allele num: 4520
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.092356621262528e-5
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South Asian
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MQ
type: SiteQuality
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VQSLOD
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DP
type: SiteQuality
SIO_000300: 2.279617e6

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.381e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.37e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

FS
type: SiteQuality
SIO_000300: 8.747999999999999e0

Other
type: Population
allele count: 0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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East Asian
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African
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European (Finnish)
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allele count: 0
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

East Asian
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allele frequency: 1.842638658559057e-4
allele num: 5427
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African
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Latino
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European (Finnish)
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allele count: 0
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Other
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South Asian
type: Population
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.89e-1

Other
type: Population
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Latino
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East Asian
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European (Finnish)
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African
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South Asian
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.39e-1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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DP
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South Asian
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Latino
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European (Finnish)
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allele count: 0
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Other
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East Asian
type: Population
allele count: 0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.585515939705768e-5
allele num: 38677
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

ClippingRankSum
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SIO_000300: -1.344e0

BaseQRankSum
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -4.977e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQ
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MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.548e1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.446782481037436e-5
allele num: 40870
num of homozygotes: 0

African
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allele count: 0
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East Asian
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Other
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allele count: 0
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South Asian
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allele count: 0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4081
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8589
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.63e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.805e1

DP
type: SiteQuality
SIO_000300: 1.371379e6

Latino
type: Population
allele count: 1
allele frequency: 1.11794298490777e-4
allele num: 8945
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8912
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 1.042e1

MQRankSum
type: SiteQuality
SIO_000300: 9.92e-1

FS
type: SiteQuality
SIO_000300: 1.3507e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.31e-1

DP
type: SiteQuality
SIO_000300: 1.464354e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.858e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8956
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8224
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.253267237494367e-5
allele num: 44380
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8944
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
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FS
type: SiteQuality
SIO_000300: 1.293e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.323e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.06e-1

QD
type: SiteQuality
SIO_000300: 1.475e1

DP
type: SiteQuality
SIO_000300: 1.469331e6

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8238
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East Asian
type: Population
allele count: 1
allele frequency: 1.547748026621266e-4
allele num: 6461
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44609
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8965
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8994
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4377
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MQRankSum
type: SiteQuality
SIO_000300: -1.092e0

QD
type: SiteQuality
SIO_000300: 1.153e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.67e-1

DP
type: SiteQuality
SIO_000300: 1.475197e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

VQSLOD
type: SiteQuality
SIO_000300: -1.455e0

FS
type: SiteQuality
SIO_000300: 8.414999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.19e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44569
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6453
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8960
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 587
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.336298932384342e-4
allele num: 8992
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.041e1

MQRankSum
type: SiteQuality
SIO_000300: -9.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.883e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 1.473886e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.574e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

South Asian
type: Population
allele count: 5
allele frequency: 5.658028742786014e-4
allele num: 8837
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6385
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.380611610943648e-4
allele num: 43459
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.862630966239814e-3
allele num: 4295
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

VQSLOD
type: SiteQuality
SIO_000300: 2.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-2

MQ
type: SiteQuality
SIO_000300: 5.981e1

DP
type: SiteQuality
SIO_000300: 1.428924e6

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-1

FS
type: SiteQuality
SIO_000300: 5.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.32e-2

QD
type: SiteQuality
SIO_000300: 1.461e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43259
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4277
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8128
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.011e0

QD
type: SiteQuality
SIO_000300: 1.249e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 1.419471e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 2.419e0

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3895
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8161
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.227938101212881e-5
allele num: 38256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8093
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
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DP
type: SiteQuality
SIO_000300: 1.150747e6

QD
type: SiteQuality
SIO_000300: 1.656e1

VQSLOD
type: SiteQuality
SIO_000300: -1.582e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8087
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5817
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 526
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.613149367617853e-5
allele num: 38268
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.211e0

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.148789e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-1

QD
type: SiteQuality
SIO_000300: 3.105e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38235
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3889
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.43819838404676e-4
allele num: 5817
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8154
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QD
type: SiteQuality
SIO_000300: 2.1e1

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.533e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.194e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 2.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.85e-1

DP
type: SiteQuality
SIO_000300: 1.148497e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

East Asian
type: Population
allele count: 155
allele frequency: 2.947328389427648e-2
allele num: 5259
num of homozygotes: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 4.302925989672978e-4
allele num: 6972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7483
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3541
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34108
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.38e0

VQSLOD
type: SiteQuality
SIO_000300: 4.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e-1

DP
type: SiteQuality
SIO_000300: 1.024686e6

QD
type: SiteQuality
SIO_000300: 2.073e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.42e-2

African
type: Population
allele count: 1
allele frequency: 1.464986815118664e-4
allele num: 6826
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 477
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33080
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7409
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3443
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7289
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.39e-2

MQ
type: SiteQuality
SIO_000300: 5.906e1

VQSLOD
type: SiteQuality
SIO_000300: 3.84e0

MQRankSum
type: SiteQuality
SIO_000300: -1.299e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.25e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.358e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

DP
type: SiteQuality
SIO_000300: 1.013842e6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9247
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46688
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.059663437021928e-4
allele num: 9805
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

FS
type: SiteQuality
SIO_000300: 1.922e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.631104e6

VQSLOD
type: SiteQuality
SIO_000300: -2.042e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.26e-1

QD
type: SiteQuality
SIO_000300: 2.714e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9253
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4479
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 619
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.143163309044149e-5
allele num: 46660
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.194e0

VQSLOD
type: SiteQuality
SIO_000300: 2.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.632125e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.192e0

QD
type: SiteQuality
SIO_000300: 1.211e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.16169476869866e-4
allele num: 9252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6541
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9803
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.423e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.951e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e0

MQRankSum
type: SiteQuality
SIO_000300: -1.697e0

FS
type: SiteQuality
SIO_000300: 4.15e0

QD
type: SiteQuality
SIO_000300: 2.206e1

DP
type: SiteQuality
SIO_000300: 1.635339e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9801
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9250
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.141556911874933e-5
allele num: 46695
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.299999999999999e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.449e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

DP
type: SiteQuality
SIO_000300: 1.648516e6

MQ
type: SiteQuality
SIO_000300: 5.866e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 1.021033285685113e-3
allele num: 9794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8403
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46683
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.43e-2

QD
type: SiteQuality
SIO_000300: 2.558e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.43e-1

DP
type: SiteQuality
SIO_000300: 1.653127e6

VQSLOD
type: SiteQuality
SIO_000300: -2.128e0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.140915027082575e-5
allele num: 46709
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 619
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.161928440168631e-4
allele num: 9251
num of homozygotes: 0

South Asian
type: Population
allele count: 39
allele frequency: 3.972700417642865e-3
allele num: 9817
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6543
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

MQ
type: SiteQuality
SIO_000300: 5.656e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.58e-1

QD
type: SiteQuality
SIO_000300: 1.856e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.525e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-1

FS
type: SiteQuality
SIO_000300: 4.457e0

DP
type: SiteQuality
SIO_000300: 1.656676e6

MQRankSum
type: SiteQuality
SIO_000300: -4.91e-1

Latino
type: Population
allele count: 2
allele frequency: 2.162863631448037e-4
allele num: 9247
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6543
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4487
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8407
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46693
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.629e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

VQSLOD
type: SiteQuality
SIO_000300: 2.05e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.662183e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.141556911874933e-5
allele num: 46695
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8409
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9818
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.614e1

FS
type: SiteQuality
SIO_000300: 2.058e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.445e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.663598e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

African
type: Population
allele count: 22
allele frequency: 2.61624449994054e-3
allele num: 8409
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4487
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46709
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9252
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9820
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.953e1

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.0e-2

DP
type: SiteQuality
SIO_000300: 1.67326e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.136e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

FS
type: SiteQuality
SIO_000300: 1.925e0

VQSLOD
type: SiteQuality
SIO_000300: 3.13e0

QD
type: SiteQuality
SIO_000300: 1.811e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8281
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.638196180824463e-5
allele num: 45193
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6387
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.45e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.719e0

QD
type: SiteQuality
SIO_000300: 1.528e1

FS
type: SiteQuality
SIO_000300: 1.688e0

DP
type: SiteQuality
SIO_000300: 1.621771e6

MQRankSum
type: SiteQuality
SIO_000300: -1.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6357
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4340
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.067235859124867e-4
allele num: 9370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9051
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 611
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.88e-2

DP
type: SiteQuality
SIO_000300: 1.60596e6

MQRankSum
type: SiteQuality
SIO_000300: 1.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 3.253e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.579e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.22e-1

QD
type: SiteQuality
SIO_000300: 1.115e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8101
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.627339300244101e-4
allele num: 6145
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4172
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9008
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8779
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.519607e6

QD
type: SiteQuality
SIO_000300: 1.064e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.81e0

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.535175560907593e-5
allele num: 39445
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3863
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8251
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 553
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5701
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e0

MQRankSum
type: SiteQuality
SIO_000300: 8.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.36e-1

QD
type: SiteQuality
SIO_000300: 1.67e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.370664e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

FS
type: SiteQuality
SIO_000300: 1.559e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5617
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6257
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2230
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.728011059270779e-4
allele num: 5787
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 383
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.03e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQRankSum
type: SiteQuality
SIO_000300: 9.27e-1

DP
type: SiteQuality
SIO_000300: 8.55004e5

FS
type: SiteQuality
SIO_000300: 2.702e0

QD
type: SiteQuality
SIO_000300: 1.478e1

VQSLOD
type: SiteQuality
SIO_000300: -2.019e0

MQ
type: SiteQuality
SIO_000300: 5.89e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4050
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.802451333813987e-4
allele num: 16644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4451
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.083e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

DP
type: SiteQuality
SIO_000300: 7.58464e5

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.05e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.28e0

QD
type: SiteQuality
SIO_000300: 1.594e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2255
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3039
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3956
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6157
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.922228785193936e-5
allele num: 20316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.96e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

FS
type: SiteQuality
SIO_000300: 2.322e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e0

QD
type: SiteQuality
SIO_000300: 1.404e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

DP
type: SiteQuality
SIO_000300: 8.75406e5

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6175
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.503128911138924e-4
allele num: 3995
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3056
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.82e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.205e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 8.94115e5

QD
type: SiteQuality
SIO_000300: 1.59e0

MQRankSum
type: SiteQuality
SIO_000300: -7.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.17e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.6e-2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3112
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.746419839329375e-4
allele num: 5726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2277
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6203
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20721
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.656e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.295e0

VQSLOD
type: SiteQuality
SIO_000300: -1.418e0

DP
type: SiteQuality
SIO_000300: 9.07825e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.07e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.453e1

MQ
type: SiteQuality
SIO_000300: 5.96e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4141
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5750
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21009
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.61e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 9.32548e5

QD
type: SiteQuality
SIO_000300: 1.048e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.517e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.847380410022779e-4
allele num: 3512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 359
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4704
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.003e0

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-2

DP
type: SiteQuality
SIO_000300: 1.001025e6

VQSLOD
type: SiteQuality
SIO_000300: 8.39e-1

QD
type: SiteQuality
SIO_000300: 1.114e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.027548431269886e-5
allele num: 24829
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 385
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3965
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5335
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6341
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6646
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.6e-3

QD
type: SiteQuality
SIO_000300: 3.028e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.95e0

FS
type: SiteQuality
SIO_000300: 1.213e0

DP
type: SiteQuality
SIO_000300: 1.057903e6

MQRankSum
type: SiteQuality
SIO_000300: -6.05e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.538e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7512
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 33788
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3339
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.2e-1

QD
type: SiteQuality
SIO_000300: 9.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.603e0

DP
type: SiteQuality
SIO_000300: 1.256294e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.586e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.087e0

African
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allele frequency: 0.0e0
allele num: 7786
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5954
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8072
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.604573631296557e-5
allele num: 38394
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

DP
type: SiteQuality
SIO_000300: 1.368186e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.221e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7815
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3823
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8155
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 529
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5997
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MQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.929e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

DP
type: SiteQuality
SIO_000300: 1.382896e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e-1

QD
type: SiteQuality
SIO_000300: 9.27e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3885
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.652892561983471e-4
allele num: 6050
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7850
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 531
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8264
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VQSLOD
type: SiteQuality
SIO_000300: -3.977e0

DP
type: SiteQuality
SIO_000300: 1.395902e6

QD
type: SiteQuality
SIO_000300: 2.32e0

FS
type: SiteQuality
SIO_000300: 1.299e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.815e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.521e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 5.803e1

African
type: Population
allele count: 4
allele frequency: 5.171299288946348e-4
allele num: 7735
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8258
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5947
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3815
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8190
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.13e0

FS
type: SiteQuality
SIO_000300: 2.602e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

MQRankSum
type: SiteQuality
SIO_000300: -2.81e-1

DP
type: SiteQuality
SIO_000300: 1.352709e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

QD
type: SiteQuality
SIO_000300: 1.208e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.3e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7215
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7434
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7688
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3413
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34276
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QD
type: SiteQuality
SIO_000300: 2.929e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

DP
type: SiteQuality
SIO_000300: 1.174796e6

VQSLOD
type: SiteQuality
SIO_000300: 1.81e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3202
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7409
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6897
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East Asian
type: Population
allele count: 0
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African
type: Population
allele count: 2
allele frequency: 2.892263195950832e-4
allele num: 6915
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DP
type: SiteQuality
SIO_000300: 1.074508e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.33e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.01e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.898e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.34e0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4930
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6877
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3192
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.455180442374854e-4
allele num: 6872
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7379
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.85e-1

DP
type: SiteQuality
SIO_000300: 1.065584e6

MQ
type: SiteQuality
SIO_000300: 5.752e1

VQSLOD
type: SiteQuality
SIO_000300: -1.929e0

MQRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.15e-2

QD
type: SiteQuality
SIO_000300: 6.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.83e-1

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 2.244740892765521e-4
allele num: 31184
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3163
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 451
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East Asian
type: Population
allele count: 0
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allele num: 4878
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African
type: Population
allele count: 0
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allele num: 6832
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.89e-1

FS
type: SiteQuality
SIO_000300: 1.1873e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.28e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.383e0

MQRankSum
type: SiteQuality
SIO_000300: 9.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.3e-3

QD
type: SiteQuality
SIO_000300: 1.597e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.048137e6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 986
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1423
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
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African
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allele count: 0
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Other
type: Population
allele count: 0
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allele num: 205
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.54e-1

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 6.06477e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.21e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.228e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.87e-1

QD
type: SiteQuality
SIO_000300: 1.064e1

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 206
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European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 3.506926179203928e-4
allele num: 11406
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Latino
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allele num: 1291
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1001
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South Asian
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allele frequency: 2.287805994051705e-4
allele num: 4371
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East Asian
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.94e-2

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.932e0

DP
type: SiteQuality
SIO_000300: 6.17288e5

Other
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allele frequency: 0.0e0
allele num: 205
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South Asian
type: Population
allele count: 0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3321
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1023
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East Asian
type: Population
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allele frequency: 2.682763246143528e-3
allele num: 1491
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MQRankSum
type: SiteQuality
SIO_000300: -2.166e0

DP
type: SiteQuality
SIO_000300: 6.35472e5

BaseQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.38e-2

MQ
type: SiteQuality
SIO_000300: 4.712e1

VQSLOD
type: SiteQuality
SIO_000300: 3.71e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.36e-1

QD
type: SiteQuality
SIO_000300: 1.254e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1329
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1023
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4431
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3321
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 205
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.38e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.36e-1

MQ
type: SiteQuality
SIO_000300: 4.712e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.166e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.76e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.254e1

DP
type: SiteQuality
SIO_000300: 6.35472e5

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1038
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1381
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3362
num of homozygotes: 0

South Asian
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allele count: 0
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Other
type: Population
allele count: 0
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MQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.908e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.63e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.72e-1

DP
type: SiteQuality
SIO_000300: 6.46015e5

QD
type: SiteQuality
SIO_000300: 1.504e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 211
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1073
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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East Asian
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QD
type: SiteQuality
SIO_000300: 1.809e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 6.69316e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.35e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1084
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1503
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.977286312014345e-4
allele num: 1673
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3495
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 217
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.29e-2

QD
type: SiteQuality
SIO_000300: 2.047e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

VQSLOD
type: SiteQuality
SIO_000300: -2.973e0

FS
type: SiteQuality
SIO_000300: 4.649e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.376e0

DP
type: SiteQuality
SIO_000300: 6.80846e5