X-13607628-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607628
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607628
    reference: chr 0
allele count: 2
allele frequency: 2.478806206930742e-5
allele num: 80684
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.75-47T>G
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.75-47T>G
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 2
  allele frequency: 4.466977866124674e-5
  allele num: 44773
  num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

X-13607631-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607631
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607631
    reference: chr 0
allele count: 1
allele frequency: 1.240479321209715e-5
allele num: 80614
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.75-44C>G
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.75-44C>G
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4287
  num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

X-13607635-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607635
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607635
    reference: chr 0
allele count: 1
allele frequency: 1.235269412258814e-5
allele num: 80954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.75-40T>C
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.75-40T>C
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5593
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
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  allele num: 8868
  num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

X-13607638-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607638
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607638
    reference: chr 0
allele count: 1
allele frequency: 1.233684522193985e-5
allele num: 81058
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.75-37A>G
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.75-37A>G
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
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  allele frequency: 2.224199288256228e-5
  allele num: 44960
  num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

X-13607638-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607638
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607638
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 81058
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.75-37A>T
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.75-37A>T
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 18101
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 44960
  num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
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site quality: DP
site quality: QD

X-13607648-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607648
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607648
    reference: chr 0
allele count: 1
allele frequency: 1.214447062252556e-5
allele num: 82342
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.75-27T>C
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.75-27T>C
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
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  allele num: 8958
  num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
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site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

X-13607669-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607669
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607669
    reference: chr 0
allele count: 1
allele frequency: 1.167378767714973e-5
allele num: 85662
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.75-6C>A
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.75-6C>A
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: c.75-6C>A
num of homozygotes: 0
population: Latino
  type: Population
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  allele frequency: 0.0e0
  allele num: 9184
  num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

X-13607671-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607671
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607671
    reference: chr 0
allele count: 1
allele frequency: 1.163453595653337e-5
allele num: 85951
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.75-4G>A
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.75-4G>A
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: c.75-4G>A
num of homozygotes: 0
population: Latino
  type: Population
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  allele frequency: 0.0e0
  allele num: 9193
  num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

X-13607676-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607676
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607676
    reference: chr 0
allele count: 3
allele frequency: 3.471740036106096e-5
allele num: 86412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.76G>C
  hgvsp: ENSP00000355126.1:p.Ala26Pro
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.76G>C
  hgvsp: ENSP00000369976.3:p.Ala26Pro
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala26Pro
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

X-13607687-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607687
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607687
    reference: chr 0
allele count: 8
allele frequency: 9.189065012634965e-5
allele num: 87060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.87C>T
  hgvsp: ENST00000361306.1:c.87C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.87C>T
  hgvsp: ENST00000380602.3:c.87C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.His29His
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 626
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
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X-13607693-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607693
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607693
    reference: chr 0
allele count: 1
allele frequency: 1.146236904243369e-5
allele num: 87242
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.93G>A
  hgvsp: ENST00000380602.3:c.93G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.93G>A
  hgvsp: ENST00000361306.1:c.93G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu31Leu
num of homozygotes: 0
population: African
  type: Population
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  allele frequency: 0.0e0
  allele num: 8506
  num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

X-13607701-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607701
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607701
    reference: chr 0
allele count: 1
allele frequency: 1.144505230388903e-5
allele num: 87374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.101C>T
  hgvsp: ENSP00000355126.1:p.Ser34Leu
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.101C>T
  hgvsp: ENSP00000369976.3:p.Ser34Leu
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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hgvs: p.Ser34Leu
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.089864158829676e-5
  allele num: 47850
  num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
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site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

X-13607707-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607707
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607707
    reference: chr 0
allele count: 1
allele frequency: 1.143615196358729e-5
allele num: 87442
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.107G>T
  hgvsp: ENSP00000355126.1:p.Arg36Leu
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.107G>T
  hgvsp: ENSP00000369976.3:p.Arg36Leu
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1304
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4901
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg36Leu
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 630
  num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

X-13607715-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607715
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607715
    reference: chr 0
allele count: 3
allele frequency: 3.429943405933802e-5
allele num: 87465
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.115G>T
  hgvsp: ENSP00000355126.1:p.Gly39Trp
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.115G>T
  hgvsp: ENSP00000369976.3:p.Gly39Trp
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49745
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4916
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2025
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly39Trp
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9258
  num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

X-13607716-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607716
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607716
    reference: chr 0
allele count: 3
allele frequency: 3.429982621421385e-5
allele num: 87464
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.116G>C
  hgvsp: ENSP00000355126.1:p.Gly39Ala
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.116G>C
  hgvsp: ENSP00000369976.3:p.Gly39Ala
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4921
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 49730
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2026
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Gly39Ala
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9257
  num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD

X-13607736-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607736
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607736
    reference: chr 0
allele count: 4
allele frequency: 4.578806991838277e-5
allele num: 87359
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.136A>G
  hgvsp: ENSP00000369976.3:p.Lys46Glu
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.136A>G
  hgvsp: ENSP00000355126.1:p.Lys46Glu
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33292
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
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  variant carriers: 0
hgvs: p.Lys46Glu
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6630
  num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-13607738-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607738
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607738
    reference: chr 0
allele count: 1
allele frequency: 1.14510809820447e-5
allele num: 87328
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.138A>G
  hgvsp: ENST00000380602.3:c.138A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.138A>G
  hgvsp: ENST00000361306.1:c.138A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 5564
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Lys46Lys
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9242
  num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

X-13607739-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607739
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607739
    reference: chr 0
allele count: 1
allele frequency: 1.145462251291509e-5
allele num: 87301
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.139C>T
  hgvsp: ENST00000361306.1:c.139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.139C>T
  hgvsp: ENST00000380602.3:c.139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu47Leu
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 627
  num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

X-13607740-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607740
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607740
    reference: chr 0
allele count: 1
allele frequency: 1.145501615157277e-5
allele num: 87298
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.140T>C
  hgvsp: ENSP00000355126.1:p.Leu47Pro
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.140T>C
  hgvsp: ENSP00000369976.3:p.Leu47Pro
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu47Pro
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10009
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP

X-13607750-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607750
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607750
    reference: chr 0
allele count: 1
allele frequency: 1.148540778940356e-5
allele num: 87067
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.150C>T
  hgvsp: ENST00000361306.1:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.150C>T
  hgvsp: ENST00000380602.3:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Cys50Cys
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8484
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

X-13607753-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607753
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607753
    reference: chr 0
allele count: 1
allele frequency: 1.149478136925836e-5
allele num: 86996
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.153C>T
  hgvsp: ENST00000380602.3:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.153C>T
  hgvsp: ENST00000361306.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Tyr51Tyr
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6621
  num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

X-13607760-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607760
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607760
    reference: chr 0
allele count: 107
allele frequency: 1.257536403915992e-3
allele num: 85087
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.160A>G
  hgvsp: ENSP00000369976.3:p.Arg54Gly
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.160A>G
  hgvsp: ENSP00000355126.1:p.Arg54Gly
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 2
hgvs: p.Arg54Gly
num of homozygotes: 0
population: African
  type: Population
  allele count: 32
  allele frequency: 3.958926141284177e-3
  allele num: 8083
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

X-13607762-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607762
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607762
    reference: chr 0
allele count: 3
allele frequency: 3.472784942004492e-5
allele num: 86386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.162A>G
  hgvsp: ENST00000361306.1:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.162A>G
  hgvsp: ENST00000380602.3:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Arg54Arg
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.247191011235955e-4
  allele num: 4450
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

X-13607781-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607781
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607781
    reference: chr 0
allele count: 1
allele frequency: 1.191270370723339e-5
allele num: 83944
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.181T>C
  hgvsp: ENSP00000355126.1:p.Cys61Arg
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.181T>C
  hgvsp: ENSP00000369976.3:p.Cys61Arg
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Cys61Arg
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.17145835142882e-5
  allele num: 46052
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

X-13607795-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607795
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607795
    reference: chr 0
allele count: 1
allele frequency: 1.240510097752196e-5
allele num: 80612
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.187+8T>G
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.187+8T>G
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11504
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.187+8T>G
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4153
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

X-13607819-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013607819
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013607819
    reference: chr 0
allele count: 1
allele frequency: 1.378150797260236e-5
allele num: 72561
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.187+32G>T
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.187+32G>T
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: East Asian
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population: Latino
population: European (Non-Finnish)
population: African
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population: Other
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site quality: ReadPosRankSum
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X-13607820-G-T
type: Variant
location: Region
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    reference: chr 0
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allele count: 0
allele frequency: 0.0e0
allele num: 72187
alternate allele: T
annotation: Annotation
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  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
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  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
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  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: AC_Adj0_Filter
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population: South Asian
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X-13607827-G-A
type: Variant
location: Region
  begin: Position
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    position: 24013607827
    reference: chr 0
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allele count: 0
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allele num: 67821
alternate allele: A
annotation: Annotation
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annotation: Annotation
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  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
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X-13607827-G-T
type: Variant
location: Region
  begin: Position
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    position: 24013607827
    reference: chr 0
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allele count: 6
allele frequency: 8.846817357455655e-5
allele num: 67821
alternate allele: T
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/3235
canonical: true
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X-13607836-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
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allele count: 1
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alternate allele: A
annotation: Annotation
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annotation: Annotation
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  variant of: http://identifiers.org/hgnc/3235
canonical: true
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population: African
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X-13608502-A-G
type: Variant
location: Region
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allele count: 0
allele frequency: NaN
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annotation: Annotation
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  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
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  ensembl gene: ENSG00000198759
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  variant of: http://identifiers.org/hgnc/3235
canonical: true
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population: European (Finnish)
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X-13612905-C-T
type: Variant
location: Region
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    reference: chr 0
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allele count: 2
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allele num: 84382
alternate allele: T
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
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  ensembl gene: ENSG00000198759
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  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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X-13612909-A-G
type: Variant
location: Region
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allele num: 84576
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annotation: Annotation
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  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
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X-13612910-C-G
type: Variant
location: Region
  begin: Position
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    reference: chr 0
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annotation: Annotation
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annotation: Annotation
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  variant of: http://identifiers.org/hgnc/3235
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X-13612912-A-G
type: Variant
location: Region
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    position: 24013612912
    reference: chr 0
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    type: ExactPosition
    position: 24013612912
    reference: chr 0
allele count: 1
allele frequency: 1.181739757270654e-5
allele num: 84621
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.188-43A>G
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.188-43A>G
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9113
  num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

X-13612919-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013612919
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013612919
    reference: chr 0
allele count: 1
allele frequency: 1.179662616491683e-5
allele num: 84770
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.188-36G>T
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.188-36G>T
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
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  allele num: 8400
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population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
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site quality: VQSLOD
site quality: FS
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site quality: DP

X-13612926-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013612926
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013612926
    reference: chr 0
allele count: 2
allele frequency: 2.35277509822836e-5
allele num: 85006
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.188-29T>C
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.188-29T>C
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
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  allele num: 8403
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population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP

X-13612930-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013612930
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013612930
    reference: chr 0
allele count: 1
allele frequency: 1.174067203606734e-5
allele num: 85174
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.188-25A>T
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.188-25A>T
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 657
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: African
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  allele num: 8414
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
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site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

X-13612937-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013612937
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013612937
    reference: chr 0
allele count: 2
allele frequency: 2.3335589106947e-5
allele num: 85706
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.188-18C>T
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.188-18C>T
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
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  allele frequency: 4.23396913436501e-5
  allele num: 47237
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population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
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X-13612939-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
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    position: 24013612939
    reference: chr 0
allele count: 3
allele frequency: 3.493368422278375e-5
allele num: 85877
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.188-16T>C
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.188-16T>C
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: Latino
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  allele num: 9186
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population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
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X-13612945-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013612945
    reference: chr 0
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    type: ExactPosition
    position: 24013612945
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 86266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.188-10C>T
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.188-10C>T
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: Other
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population: European (Non-Finnish)
population: Latino
population: African
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site quality: InbreedingCoeff
site quality: MQ
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X-13612960-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013612960
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013612960
    reference: chr 0
allele count: 1
allele frequency: 1.150059803109762e-5
allele num: 86952
alternate allele: G
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.193T>G
  hgvsp: ENSP00000369976.3:p.Cys65Gly
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.193T>G
  hgvsp: ENSP00000355126.1:p.Cys65Gly
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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population: European (Finnish)
population: European (Non-Finnish)
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site quality: VQSLOD
site quality: ClippingRankSum
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X-13612962-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013612962
    reference: chr 0
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    type: ExactPosition
    position: 24013612962
    reference: chr 0
allele count: 2
allele frequency: 2.299802217009337e-5
allele num: 86964
alternate allele: A
annotation: Annotation
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  ensembl protein: ENSP00000355126
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  gene symbol: EGFL6
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  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
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  gene symbol: EGFL6
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  hgvsp: ENSP00000369976.3:p.Cys65Ter
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: stop gained
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Cys65Ter
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 625
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum

X-13612963-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013612963
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013612963
    reference: chr 0
allele count: 509
allele frequency: 5.850978228383567e-3
allele num: 86994
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.196G>A
  hgvsp: ENSP00000369976.3:p.Glu66Lys
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.196G>A
  hgvsp: ENSP00000355126.1:p.Glu66Lys
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Glu66Lys
num of homozygotes: 6
population: Other
  type: Population
  allele count: 1
  allele frequency: 1.6e-3
  allele num: 625
  num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

X-13612968-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013612968
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013612968
    reference: chr 0
allele count: 1
allele frequency: 1.148817866415458e-5
allele num: 87046
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.201T>C
  hgvsp: ENST00000380602.3:c.201T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.201T>C
  hgvsp: ENST00000361306.1:c.201T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1398
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro67Pro
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4507
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

X-13612989-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013612989
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013612989
    reference: chr 0
allele count: 3
allele frequency: 3.447641812999908e-5
allele num: 87016
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.222C>A
  hgvsp: ENSP00000355126.1:p.Cys74Ter
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.222C>A
  hgvsp: ENSP00000369976.3:p.Cys74Ter
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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hgvs: p.Cys74Ter
num of homozygotes: 0
population: Other
  type: Population
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  allele num: 627
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
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X-13612989-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013612989
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013612989
    reference: chr 0
allele count: 32
allele frequency: 3.677484600533236e-4
allele num: 87016
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.222C>T
  hgvsp: ENST00000380602.3:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.222C>T
  hgvsp: ENST00000361306.1:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
hgvs: p.Cys74Cys
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4502
  num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP

X-13612990-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013612990
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013612990
    reference: chr 0
allele count: 403
allele frequency: 4.631917705878973e-3
allele num: 87005
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.223G>A
  hgvsp: ENSP00000355126.1:p.Val75Met
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.223G>A
  hgvsp: ENSP00000369976.3:p.Val75Met
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 2
hgvs: p.Val75Met
num of homozygotes: 2
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6627
  num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

X-13612999-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013612999
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013612999
    reference: chr 0
allele count: 1
allele frequency: 1.15145025159188e-5
allele num: 86847
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.232A>G
  hgvsp: ENSP00000369976.3:p.Asn78Asp
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.232A>G
  hgvsp: ENSP00000355126.1:p.Asn78Asp
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asn78Asp
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 1
  allele frequency: 1.509889778046203e-4
  allele num: 6623
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

X-13613013-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613013
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013613013
    reference: chr 0
allele count: 1
allele frequency: 1.158909697756351e-5
allele num: 86288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.246C>T
  hgvsp: ENST00000361306.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.246C>T
  hgvsp: ENST00000380602.3:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1711
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Cys82Cys
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8419
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ

X-13613021-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613021
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013613021
    reference: chr 0
allele count: 1
allele frequency: 1.168961728193019e-5
allele num: 85546
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.254G>C
  hgvsp: ENSP00000355126.1:p.Gly85Ala
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.254G>C
  hgvsp: ENSP00000369976.3:p.Gly85Ala
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
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  variant carriers: 0
genotype depth: GenotypeDepth
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hgvs: p.Gly85Ala
num of homozygotes: 0
population: Other
  type: Population
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  allele frequency: 0.0e0
  allele num: 611
  num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

X-13613022-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613022
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013613022
    reference: chr 0
allele count: 1
allele frequency: 1.168934399401506e-5
allele num: 85548
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.255A>G
  hgvsp: ENST00000361306.1:c.255A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.255A>G
  hgvsp: ENST00000380602.3:c.255A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly85Gly
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9131
  num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
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X-13613025-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613025
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013613025
    reference: chr 0
allele count: 1
allele frequency: 1.171316794340197e-5
allele num: 85374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.258C>T
  hgvsp: ENST00000361306.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.258C>T
  hgvsp: ENST00000380602.3:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Tyr86Tyr
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8361
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP

X-13613028-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613028
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013613028
    reference: chr 0
allele count: 1
allele frequency: 1.174067203606734e-5
allele num: 85174
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.261C>G
  hgvsp: ENST00000361306.1:c.261C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.261C>G
  hgvsp: ENST00000380602.3:c.261C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 216
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Thr87Thr
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9400
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS

X-13613028-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613028
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013613028
    reference: chr 0
allele count: 1
allele frequency: 1.174067203606734e-5
allele num: 85174
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.261C>T
  hgvsp: ENST00000380602.3:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.261C>T
  hgvsp: ENST00000361306.1:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Thr87Thr
num of homozygotes: 0
population: European (Finnish)
  type: Population
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  allele frequency: 0.0e0
  allele num: 4406
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population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: DP
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site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
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X-13613029-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613029
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013613029
    reference: chr 0
allele count: 2
allele frequency: 2.354575528896528e-5
allele num: 84941
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.262G>A
  hgvsp: ENSP00000369976.3:p.Gly88Arg
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.262G>A
  hgvsp: ENSP00000355126.1:p.Gly88Arg
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly88Arg
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6510
  num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

X-13613030-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613030
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013613030
    reference: chr 0
allele count: 1
allele frequency: 1.177315485230577e-5
allele num: 84939
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.263G>A
  hgvsp: ENSP00000369976.3:p.Gly88Glu
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.263G>A
  hgvsp: ENSP00000355126.1:p.Gly88Glu
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2226
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly88Glu
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 46639
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

X-13613060-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613060
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013613060
    reference: chr 0
allele count: 2
allele frequency: 2.456549775839833e-5
allele num: 81415
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.280+13G>T
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.280+13G>T
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
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  allele frequency: 2.253013405429762e-4
  allele num: 8877
  num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

X-13613061-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613061
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013613061
    reference: chr 0
allele count: 5772
allele frequency: 7.140824683599115e-2
allele num: 80831
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.280+14C>T
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.280+14C>T
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 4.25e1
  variant carriers: 495
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 182
population: European (Non-Finnish)
  type: Population
  allele count: 4712
  allele frequency: 1.066183957461251e-1
  allele num: 44195
  num of homozygotes: 159
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

X-13613065-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613065
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013613065
    reference: chr 0
allele count: 1
allele frequency: 1.244740969404267e-5
allele num: 80338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.280+18G>A
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.280+18G>A
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
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  allele num: 43886
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population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
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site quality: InbreedingCoeff
site quality: DP
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X-13613065-G-C
type: Variant
location: Region
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    reference: chr 0
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    type: ExactPosition
    position: 24013613065
    reference: chr 0
allele count: 1
allele frequency: 1.244740969404267e-5
allele num: 80338
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.280+18G>C
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.280+18G>C
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: South Asian
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  allele num: 8765
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population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
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site quality: FS
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X-13613072-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613072
    reference: chr 0
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    type: ExactPosition
    position: 24013613072
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allele count: 2
allele frequency: 2.510134668724977e-5
allele num: 79677
alternate allele: G
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
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  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.280+25A>G
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.280+25A>G
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
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site quality: MQRankSum
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X-13613082-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613082
    reference: chr 0
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    type: ExactPosition
    position: 24013613082
    reference: chr 0
allele count: 75
allele frequency: 9.604302727621974e-4
allele num: 78090
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.280+35C>T
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.280+35C>T
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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population: African
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population: East Asian
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X-13613086-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613086
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013613086
    reference: chr 0
allele count: 1
allele frequency: 1.290006321030973e-5
allele num: 77519
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
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  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
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  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.280+39C>T
  variant of: http://identifiers.org/hgnc/3235
canonical: true
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filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
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  allele num: 8339
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

X-13613087-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013613087
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013613087
    reference: chr 0
allele count: 1
allele frequency: 1.287730503760173e-5
allele num: 77656
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.280+40A>G
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.280+40A>G
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
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  allele num: 5974
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population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
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site quality: VQSLOD
site quality: FS
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site quality: QD
site quality: BaseQRankSum
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site quality: DP
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X-13618056-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013618056
    reference: chr 0
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    type: ExactPosition
    position: 24013618056
    reference: chr 0
allele count: 6
allele frequency: 6.948626488164173e-5
allele num: 86348
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
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  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.281-38T>C
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
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site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
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site quality: DP

X-13618062-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013618062
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013618062
    reference: chr 0
allele count: 1
allele frequency: 1.157648584195781e-5
allele num: 86382
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.281-32C>T
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.281-32C>T
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
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X-13618064-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013618064
    reference: chr 0
allele count: 3
allele frequency: 3.469892895972611e-5
allele num: 86458
alternate allele: T
annotation: Annotation
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  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
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  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
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  ensembl gene: ENSG00000198759
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  gene symbol: EGFL6
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  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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site quality: ClippingRankSum
site quality: InbreedingCoeff

X-13618084-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013618084
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013618084
    reference: chr 0
allele count: 3
allele frequency: 3.444949703734326e-5
allele num: 87084
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.281-10G>A
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.281-10G>A
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
  type: Population
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  allele frequency: 0.0e0
  allele num: 629
  num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

X-13618104-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013618104
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013618104
    reference: chr 0
allele count: 4
allele frequency: 4.568609086963474e-5
allele num: 87554
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.291G>A
  hgvsp: ENST00000361306.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.291G>A
  hgvsp: ENST00000380602.3:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Glu97Glu
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 631
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

X-13618113-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013618113
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013618113
    reference: chr 0
allele count: 2
allele frequency: 2.282635988038987e-5
allele num: 87618
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.300G>T
  hgvsp: ENSP00000355126.1:p.Met100Ile
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.300G>T
  hgvsp: ENSP00000369976.3:p.Met100Ile
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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hgvs: p.Met100Ile
num of homozygotes: 0
population: East Asian
  type: Population
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  allele num: 6633
  num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
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site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
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site quality: DP

X-13618117-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013618117
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013618117
    reference: chr 0
allele count: 1
allele frequency: 1.141096593826667e-5
allele num: 87635
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.304C>T
  hgvsp: ENSP00000355126.1:p.Pro102Ser
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.304C>T
  hgvsp: ENSP00000369976.3:p.Pro102Ser
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Pro102Ser
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
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  allele frequency: 2.08554922938956e-5
  allele num: 47949
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
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X-13618118-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013618118
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013618118
    reference: chr 0
allele count: 2
allele frequency: 2.282062984938384e-5
allele num: 87640
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.305C>T
  hgvsp: ENSP00000369976.3:p.Pro102Leu
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.305C>T
  hgvsp: ENSP00000355126.1:p.Pro102Leu
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Pro102Leu
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9302
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
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site quality: InbreedingCoeff

X-13618120-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013618120
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013618120
    reference: chr 0
allele count: 64
allele frequency: 7.302768205572925e-4
allele num: 87638
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.307C>T
  hgvsp: ENSP00000369976.3:p.Arg103Trp
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.307C>T
  hgvsp: ENSP00000355126.1:p.Arg103Trp
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Arg103Trp
num of homozygotes: 0
population: South Asian
  type: Population
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  allele frequency: 0.0e0
  allele num: 10087
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

X-13618121-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013618121
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013618121
    reference: chr 0
allele count: 1
allele frequency: 1.140862263698904e-5
allele num: 87653
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.308G>A
  hgvsp: ENSP00000369976.3:p.Arg103Gln
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.308G>A
  hgvsp: ENSP00000355126.1:p.Arg103Gln
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: African
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  allele num: 8514
  num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

X-13618121-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013618121
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013618121
    reference: chr 0
allele count: 1
allele frequency: 1.140862263698904e-5
allele num: 87653
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.308G>T
  hgvsp: ENSP00000355126.1:p.Arg103Leu
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.308G>T
  hgvsp: ENSP00000369976.3:p.Arg103Leu
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Arg103Leu
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
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  allele num: 47953
  num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
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site quality: ReadPosRankSum
site quality: FS
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X-13618124-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013618124
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013618124
    reference: chr 0
allele count: 1
allele frequency: 1.140797189075726e-5
allele num: 87658
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.311C>A
  hgvsp: ENSP00000355126.1:p.Pro104Gln
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.311C>A
  hgvsp: ENSP00000369976.3:p.Pro104Gln
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13604
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6499
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2312
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2454
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3524
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2838
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27608
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro104Gln
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8514
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

X-13618137-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24013618137
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24013618137
    reference: chr 0
allele count: 793
allele frequency: 9.046212112570014e-3
allele num: 87661
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000369976
  ensembl transcript: ENST00000380602
  gene symbol: EGFL6
  hgvsc: ENST00000380602.3:c.324A>G
  hgvsp: ENST00000380602.3:c.324A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198759
  ensembl protein: ENSP00000355126
  ensembl transcript: ENST00000361306
  gene symbol: EGFL6
  hgvsc: ENST00000361306.1:c.324A>G
  hgvsp: ENST00000361306.1:c.324A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3235
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8562
  bin: 3.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 5.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 12115
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 5188
  bin: 3.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 9.75e1
  variant carriers: 372
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 4.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg108Arg
num of homozygotes: 17
reference allele: A

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7783
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4292
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.873e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.25e0

DP
type: SiteQuality
SIO_000300: 1.270975e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.482e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44748
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6196
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.130837950921633e-4
allele num: 8843
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7756
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8201
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 583
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.285808e6

VQSLOD
type: SiteQuality
SIO_000300: -3.437e-1

QD
type: SiteQuality
SIO_000300: 1.363e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.83e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.64e-1

FS
type: SiteQuality
SIO_000300: 9.746e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 585
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7836
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.216693028348948e-4
allele num: 8219
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44917
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4303
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.045e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.25e-1

DP
type: SiteQuality
SIO_000300: 1.304826e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.463e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8879
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4309
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

DP
type: SiteQuality
SIO_000300: 1.326431e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.92e1

FS
type: SiteQuality
SIO_000300: 9.380000000000001e0

QD
type: SiteQuality
SIO_000300: 3.25e0

VQSLOD
type: SiteQuality
SIO_000300: -2.357e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.99e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4309
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8879
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.357e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

MQ
type: SiteQuality
SIO_000300: 5.92e1

FS
type: SiteQuality
SIO_000300: 9.380000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.99e-1

DP
type: SiteQuality
SIO_000300: 1.326431e6

QD
type: SiteQuality
SIO_000300: 3.25e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8295
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8080
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.188950179493915e-5
allele num: 45684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4359
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e0

VQSLOD
type: SiteQuality
SIO_000300: 4.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.064e0

FS
type: SiteQuality
SIO_000300: 7.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.94e0

QD
type: SiteQuality
SIO_000300: 1.502e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.401516e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8447
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4485
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9035
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.114209602740015e-5
allele num: 47299
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.286e0

FS
type: SiteQuality
SIO_000300: 7.216e0

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

QD
type: SiteQuality
SIO_000300: 1.268e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.705e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

DP
type: SiteQuality
SIO_000300: 1.513659e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8455
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9164
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47427
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.76e-2

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.664e1

DP
type: SiteQuality
SIO_000300: 1.520284e6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9213
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.306230555789119e-5
allele num: 47572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4499
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.74e-1

FS
type: SiteQuality
SIO_000300: 6.69e-1

QD
type: SiteQuality
SIO_000300: 1.874e1

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.14e-2

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 1.53203e6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6629
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9241
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.256360324140964e-4
allele num: 47757
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.042692268409764e-4
allele num: 9791
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.34e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

FS
type: SiteQuality
SIO_000300: 2.079e0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 1.54965e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.813e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

QD
type: SiteQuality
SIO_000300: 1.427e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.76e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9247
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4517
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.091175240485153e-5
allele num: 47820
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.55351e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.377e0

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-2

QD
type: SiteQuality
SIO_000300: 2.548e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.69e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

MQ
type: SiteQuality
SIO_000300: 5.89e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9253
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9985
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.088e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 3.499e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.836e0

MQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 1.557757e6

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

QD
type: SiteQuality
SIO_000300: 1.332e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10031
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47867
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.080263584314573e-4
allele num: 9257
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e-1

DP
type: SiteQuality
SIO_000300: 1.560055e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.689e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.919e1

QD
type: SiteQuality
SIO_000300: 7.03e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47875
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.524204494043131e-4
allele num: 6631
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10045
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4517
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.9e-2

QD
type: SiteQuality
SIO_000300: 2.082e1

FS
type: SiteQuality
SIO_000300: 6.244e0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-3

MQ
type: SiteQuality
SIO_000300: 5.951e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

DP
type: SiteQuality
SIO_000300: 1.561644e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.358e0

VQSLOD
type: SiteQuality
SIO_000300: -4.867e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.44e-2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.524886877828054e-4
allele num: 6630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4517
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10045
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

QD
type: SiteQuality
SIO_000300: 2.072e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.73e-1

DP
type: SiteQuality
SIO_000300: 1.561763e6

FS
type: SiteQuality
SIO_000300: 7.05e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: -5.104e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8497
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.364001338240214e-5
allele num: 47824
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: 8.599999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.560057e6

FS
type: SiteQuality
SIO_000300: 5.48e0

MQRankSum
type: SiteQuality
SIO_000300: -3.73e-1

MQ
type: SiteQuality
SIO_000300: 5.929e1

QD
type: SiteQuality
SIO_000300: 1.837e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.438e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.03e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.986019572598362e-5
allele num: 10014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.559231e6

QD
type: SiteQuality
SIO_000300: 2.378e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.39e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8495
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47789
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10012
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.508750754375377e-4
allele num: 6628
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.013e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.688e0

FS
type: SiteQuality
SIO_000300: 7.63e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 1.135e1

DP
type: SiteQuality
SIO_000300: 1.55865e6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.092575541977065e-5
allele num: 47788
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.652e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

QD
type: SiteQuality
SIO_000300: 1.217e1

DP
type: SiteQuality
SIO_000300: 1.558592e6

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.097711396866019e-5
allele num: 47671
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9223
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9945
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4495
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6623
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MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 2.963e0

DP
type: SiteQuality
SIO_000300: 1.552761e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.521e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.27e-1

QD
type: SiteQuality
SIO_000300: 1.23e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.15e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9215
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9929
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.226179875333927e-4
allele num: 4492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47635
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 1.550894e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

QD
type: SiteQuality
SIO_000300: 1.355e1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.63e0

FS
type: SiteQuality
SIO_000300: 2.595e0

VQSLOD
type: SiteQuality
SIO_000300: 4.96e-1

European (Non-Finnish)
type: Population
allele count: 67
allele frequency: 1.439343487507787e-3
allele num: 46549
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 6.081800212863008e-4
allele num: 6577
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.332633543270352e-4
allele num: 4287
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 4.942339373970346e-3
allele num: 607
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9156
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

DP
type: SiteQuality
SIO_000300: 1.611579e6

MQ
type: SiteQuality
SIO_000300: 5.947e1

VQSLOD
type: SiteQuality
SIO_000300: -5.259e2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.819e0

QD
type: SiteQuality
SIO_000300: 8.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

FS
type: SiteQuality
SIO_000300: 3.34046e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.832e0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.223775633038373e-5
allele num: 47351
num of homozygotes: 0

African
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allele count: 0
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East Asian
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allele count: 0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9759
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QD
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: -5.786e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.29e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.856e0

DP
type: SiteQuality
SIO_000300: 1.533542e6

FS
type: SiteQuality
SIO_000300: 1.07591e2

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.385e0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6455
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4339
num of homozygotes: 0

Latino
type: Population
allele count: 0
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allele num: 9024
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8316
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9157
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

FS
type: SiteQuality
SIO_000300: 1.284e0

MQ
type: SiteQuality
SIO_000300: 5.935e1

MQRankSum
type: SiteQuality
SIO_000300: -1.159e0

DP
type: SiteQuality
SIO_000300: 1.45053e6

VQSLOD
type: SiteQuality
SIO_000300: 2.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

QD
type: SiteQuality
SIO_000300: 1.384e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.97e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44280
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 576
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8117
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.147578609134726e-4
allele num: 8714
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

DP
type: SiteQuality
SIO_000300: 1.32444e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e0

MQRankSum
type: SiteQuality
SIO_000300: -1.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.374e0

QD
type: SiteQuality
SIO_000300: 2.63e1

VQSLOD
type: SiteQuality
SIO_000300: -3.364e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7998
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.508528998595224e-5
allele num: 39864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3775
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 507
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South Asian
type: Population
allele count: 0
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allele num: 7296
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.55e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.2e0

MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.8e0

DP
type: SiteQuality
SIO_000300: 1.037235e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7255
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7950
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3768
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

QD
type: SiteQuality
SIO_000300: 2.041e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

DP
type: SiteQuality
SIO_000300: 1.025411e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.096e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7273
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 483
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5101
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6641
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3568
num of homozygotes: 0

European (Non-Finnish)
type: Population
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allele frequency: 0.0e0
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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FS
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MQ
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ClippingRankSum
type: SiteQuality
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DP
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ReadPosRankSum
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QD
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VQSLOD
type: SiteQuality
SIO_000300: -9.182e-1

African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.176239952950402e-3
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South Asian
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European (Non-Finnish)
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DP
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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MQ
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FS
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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DP
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VQSLOD
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MQ
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BaseQRankSum
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ClippingRankSum
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QD
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East Asian
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allele frequency: NaN
allele num: 0
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European (Finnish)
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allele frequency: NaN
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Other
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African
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allele frequency: NaN
allele num: 0
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European (Non-Finnish)
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allele frequency: NaN
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Latino
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allele frequency: NaN
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MQ
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SIO_000300: 6.0e1

VQSLOD
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BaseQRankSum
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QD
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MQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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SIO_000300: 1.98e-1

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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Latino
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allele frequency: 2.198043741070447e-4
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Other
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African
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FS
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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MQ
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VQSLOD
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DP
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
SIO_000300: 2.102e1

African
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 4429
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Latino
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Other
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QD
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FS
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VQSLOD
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MQ
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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DP
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.01e-1

Latino
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South Asian
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African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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MQ
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DP
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QD
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MQRankSum
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FS
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: 2.78e-1

InbreedingCoeff
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SIO_000300: 8.38e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4424
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African
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allele frequency: 0.0e0
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East Asian
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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QD
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FS
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MQRankSum
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.96e-1

MQ
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DP
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Latino
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 46780
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East Asian
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South Asian
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Other
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QD
type: SiteQuality
SIO_000300: 1.476e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.41e-1

ClippingRankSum
type: SiteQuality
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MQ
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InbreedingCoeff
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VQSLOD
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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SIO_000300: 1.686386e6

European (Finnish)
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allele count: 0
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allele num: 4441
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Latino
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allele frequency: 2.18842324105482e-4
allele num: 9139
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East Asian
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Other
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46901
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South Asian
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VQSLOD
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QD
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InbreedingCoeff
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FS
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MQ
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DP
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European (Finnish)
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South Asian
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European (Non-Finnish)
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Latino
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East Asian
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Other
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BaseQRankSum
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InbreedingCoeff
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FS
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MQ
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MQRankSum
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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QD
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DP
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Other
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African
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South Asian
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East Asian
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Latino
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European (Finnish)
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FS
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InbreedingCoeff
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VQSLOD
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DP
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QD
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BaseQRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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ClippingRankSum
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East Asian
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African
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South Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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QD
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FS
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DP
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InbreedingCoeff
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MQ
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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South Asian
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Other
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East Asian
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European (Non-Finnish)
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Latino
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African
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InbreedingCoeff
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MQ
type: SiteQuality
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BaseQRankSum
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FS
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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QD
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VQSLOD
type: SiteQuality
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DP
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European (Finnish)
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European (Non-Finnish)
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African
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Latino
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South Asian
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Other
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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FS
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MQ
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InbreedingCoeff
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QD
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BaseQRankSum
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DP
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South Asian
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European (Finnish)
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African
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European (Non-Finnish)
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Latino
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East Asian
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MQRankSum
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FS
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ClippingRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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SIO_000300: -1.473e0

European (Finnish)
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African
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South Asian
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allele num: 9783
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6626
num of homozygotes: 0

Latino
type: Population
allele count: 29
allele frequency: 3.138528138528138e-3
allele num: 9240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.380122349786307e-5
allele num: 47732
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.437e1

MQRankSum
type: SiteQuality
SIO_000300: 2.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.65e-1

DP
type: SiteQuality
SIO_000300: 1.838754e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.596e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.266e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47746
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9805
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.509206157561123e-4
allele num: 6626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9247
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8487
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQRankSum
type: SiteQuality
SIO_000300: -6.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

QD
type: SiteQuality
SIO_000300: 2.946e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.28e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.308e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e0

DP
type: SiteQuality
SIO_000300: 1.812315e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9801
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4502
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.243944636678201e-4
allele num: 9248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47733
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6627
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

DP
type: SiteQuality
SIO_000300: 1.816458e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.697e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.27e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 1.106e1

QD
type: SiteQuality
SIO_000300: 1.477e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.77e-1

East Asian
type: Population
allele count: 1
allele frequency: 1.508978421608571e-4
allele num: 6627
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.081314878892734e-4
allele num: 9248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.18997339366895e-5
allele num: 47733
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9801
num of homozygotes: 0

African
type: Population
allele count: 28
allele frequency: 3.302665723047889e-3
allele num: 8478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.697e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.27e-1

QD
type: SiteQuality
SIO_000300: 1.477e1

VQSLOD
type: SiteQuality
SIO_000300: 1.106e1

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

DP
type: SiteQuality
SIO_000300: 1.816458e6

South Asian
type: Population
allele count: 4
allele frequency: 4.079135223332653e-4
allele num: 9806
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 9.734991887506761e-4
allele num: 9245
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.415261233636042e-3
allele num: 8479
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 42
allele frequency: 9.331259720062209e-3
allele num: 4501
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.594896331738437e-3
allele num: 627
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 335
allele frequency: 7.020117351215423e-3
allele num: 47720
num of homozygotes: 2

MQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.387999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.47e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 1.830866e6

QD
type: SiteQuality
SIO_000300: 1.691e1

VQSLOD
type: SiteQuality
SIO_000300: 3.718e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.46e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4495
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9239
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9750
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 2.16e0

VQSLOD
type: SiteQuality
SIO_000300: -6.237e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 5.509e0

DP
type: SiteQuality
SIO_000300: 1.806838e6

QD
type: SiteQuality
SIO_000300: 1.316e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9607
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.087547580206634e-4
allele num: 9195
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47381
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.99e-2

DP
type: SiteQuality
SIO_000300: 1.788743e6

QD
type: SiteQuality
SIO_000300: 3.037e1

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9131
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46984
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.526717557251908e-4
allele num: 6550
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
SIO_000300: 7.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 1.1925e1

QD
type: SiteQuality
SIO_000300: 1.182e1

DP
type: SiteQuality
SIO_000300: 1.764863e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

VQSLOD
type: SiteQuality
SIO_000300: -1.851e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8373
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9463
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.128112364332837e-5
allele num: 46990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 611
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.124e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.51e0

QD
type: SiteQuality
SIO_000300: 8.82e0

DP
type: SiteQuality
SIO_000300: 1.764239e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.02e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.132787339774351e-5
allele num: 46887
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6541
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9439
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.905e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.27e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.25e-1

FS
type: SiteQuality
SIO_000300: 1.292e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

QD
type: SiteQuality
SIO_000300: 1.2e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

DP
type: SiteQuality
SIO_000300: 1.758817e6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4406
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.532332209623046e-4
allele num: 6526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9105
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8355
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46774
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.25e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.39e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

QD
type: SiteQuality
SIO_000300: 1.566e1

DP
type: SiteQuality
SIO_000300: 1.754564e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.137939881130542e-5
allele num: 46774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9105
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8355
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.754564e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: 3.72e0

MQRankSum
type: SiteQuality
SIO_000300: 5.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.25e-2

QD
type: SiteQuality
SIO_000300: 1.566e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8339
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.068947087119188e-4
allele num: 9355
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9086
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.143944428960401e-5
allele num: 46643
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.41e0

MQ
type: SiteQuality
SIO_000300: 5.919e1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 1.596e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.377e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.78e-1

DP
type: SiteQuality
SIO_000300: 1.744779e6

VQSLOD
type: SiteQuality
SIO_000300: -8.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 607
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4394
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.068490223314457e-4
allele num: 9359
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6511
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8341
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9088
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

FS
type: SiteQuality
SIO_000300: 2.424e0

QD
type: SiteQuality
SIO_000300: 1.005e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.083e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.744036e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6239
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 577
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44660
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.315e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.953e1

DP
type: SiteQuality
SIO_000300: 1.58992e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

East Asian
type: Population
allele count: 1
allele frequency: 1.60487883164821e-4
allele num: 6231
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 355
allele frequency: 8.515231470376589e-2
allele num: 4169
num of homozygotes: 12

African
type: Population
allele count: 118
allele frequency: 1.450344149459194e-2
allele num: 8136
num of homozygotes: 0

Latino
type: Population
allele count: 333
allele frequency: 3.838616714697406e-2
allele num: 8675
num of homozygotes: 9

South Asian
type: Population
allele count: 211
allele frequency: 2.384989261896688e-2
allele num: 8847
num of homozygotes: 1

Other
type: Population
allele count: 42
allele frequency: 7.26643598615917e-2
allele num: 578
num of homozygotes: 1

VQSLOD
type: SiteQuality
SIO_000300: 3.74e1

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.349e-1

QD
type: SiteQuality
SIO_000300: 1.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.623815e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.916e0

Latino
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African
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6196
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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Other
type: Population
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.98e-1

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -4.7e-2

MQ
type: SiteQuality
SIO_000300: 5.911e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

DP
type: SiteQuality
SIO_000300: 1.513727e6

VQSLOD
type: SiteQuality
SIO_000300: 1.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.703e0

FS
type: SiteQuality
SIO_000300: 3.014e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.208e0

European (Finnish)
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allele frequency: 2.400960384153662e-4
allele num: 4165
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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African
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East Asian
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Latino
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DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.98e-1

MQRankSum
type: SiteQuality
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QD
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VQSLOD
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SIO_000300: 1.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.208e0

FS
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SIO_000300: 3.014e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.703e0

South Asian
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European (Finnish)
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allele frequency: 0.0e0
allele num: 4148
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African
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allele frequency: 1.237470610073011e-4
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European (Non-Finnish)
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allele frequency: 2.297688525343505e-5
allele num: 43522
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Latino
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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FS
type: SiteQuality
SIO_000300: 1.484e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 1.471553e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.02e-1

QD
type: SiteQuality
SIO_000300: 1.484e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

South Asian
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allele count: 1
allele frequency: 1.188777936281503e-4
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Latino
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allele count: 1
allele frequency: 1.188919272381405e-4
allele num: 8411
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African
type: Population
allele count: 73
allele frequency: 9.121579407722104e-3
allele num: 8003
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 557
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42623
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East Asian
type: Population
allele count: 0
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allele num: 6020
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DP
type: SiteQuality
SIO_000300: 1.403347e6

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.05e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.25e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.421e0

QD
type: SiteQuality
SIO_000300: 1.745e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7977
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42301
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8332
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4039
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East Asian
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allele count: 1
allele frequency: 1.674200569228193e-4
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Other
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DP
type: SiteQuality
SIO_000300: 1.382737e6

MQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.99e-1

FS
type: SiteQuality
SIO_000300: 4.472e0

QD
type: SiteQuality
SIO_000300: 2.803e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.08e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.674e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8356
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.360271903323263e-5
allele num: 42368
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 7973
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4049
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South Asian
type: Population
allele count: 0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 555
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VQSLOD
type: SiteQuality
SIO_000300: -1.356e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.167e0

QD
type: SiteQuality
SIO_000300: 1.788e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.87e0

MQRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.376017e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

East Asian
type: Population
allele count: 6
allele frequency: 9.053870529651426e-4
allele num: 6627
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4525
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South Asian
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47687
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Latino
type: Population
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QD
type: SiteQuality
SIO_000300: 2.137e1

FS
type: SiteQuality
SIO_000300: 2.046e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.98e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e0

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

DP
type: SiteQuality
SIO_000300: 2.112088e6

South Asian
type: Population
allele count: 1
allele frequency: 1.094810597766586e-4
allele num: 9134
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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allele num: 619
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4523
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47693
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QD
type: SiteQuality
SIO_000300: 2.523e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.42e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

DP
type: SiteQuality
SIO_000300: 2.119852e6

FS
type: SiteQuality
SIO_000300: 0.0e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9190
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4523
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 617
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

FS
type: SiteQuality
SIO_000300: 2.983e0

DP
type: SiteQuality
SIO_000300: 2.122611e6

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.046e0

QD
type: SiteQuality
SIO_000300: 1.101e1

MQ
type: SiteQuality
SIO_000300: 5.913e1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.36e-2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8509
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European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.268675428881877e-5
allele num: 47857
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4525
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South Asian
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allele count: 0
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allele num: 9634
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VQSLOD
type: SiteQuality
SIO_000300: -4.332e-1

DP
type: SiteQuality
SIO_000300: 2.146089e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.371e0

QD
type: SiteQuality
SIO_000300: 1.356e1

FS
type: SiteQuality
SIO_000300: 5.54e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.72e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

East Asian
type: Population
allele count: 4
allele frequency: 6.029544769369913e-4
allele num: 6634
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47937
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African
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allele count: 0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10016
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European (Finnish)
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allele count: 0
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allele num: 4525
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.97e-1

DP
type: SiteQuality
SIO_000300: 2.159999e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.75e-1

FS
type: SiteQuality
SIO_000300: 4.18e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.435e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.539e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.066e-1

QD
type: SiteQuality
SIO_000300: 1.945e1

Other
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
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allele num: 47942
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African
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Latino
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.54e-2

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

DP
type: SiteQuality
SIO_000300: 2.16175e6

South Asian
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allele count: 0
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allele num: 10080
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4525
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Latino
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allele count: 0
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African
type: Population
allele count: 0
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Other
type: Population
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East Asian
type: Population
allele count: 0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.161903e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.51e-1

QD
type: SiteQuality
SIO_000300: 1.329e1

FS
type: SiteQuality
SIO_000300: 5.028e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.3e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10085
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4525
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East Asian
type: Population
allele count: 2
allele frequency: 3.014772384684956e-4
allele num: 6634
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Other
type: Population
allele count: 0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
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European (Non-Finnish)
type: Population
allele count: 0
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allele num: 47949
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MQRankSum
type: SiteQuality
SIO_000300: 7.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e-1

QD
type: SiteQuality
SIO_000300: 1.274e1

DP
type: SiteQuality
SIO_000300: 2.162089e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.838e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.08554922938956e-5
allele num: 47949
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 7.528500752850075e-4
allele num: 9298
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Other
type: Population
allele count: 0
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allele num: 632
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African
type: Population
allele count: 56
allele frequency: 6.578174556560555e-3
allele num: 8513
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4525
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East Asian
type: Population
allele count: 0
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allele num: 6634
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-2

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.324e-1

QD
type: SiteQuality
SIO_000300: 1.745e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 2.164994e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

South Asian
type: Population
allele count: 0
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allele num: 10093
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4525
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East Asian
type: Population
allele count: 1
allele frequency: 1.507386192342478e-4
allele num: 6634
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.944e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-2

QD
type: SiteQuality
SIO_000300: 2.213e1

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

DP
type: SiteQuality
SIO_000300: 2.164652e6

FS
type: SiteQuality
SIO_000300: 6.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10093
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4525
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.075037626316921e-4
allele num: 9302
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

DP
type: SiteQuality
SIO_000300: 2.164652e6

MQ
type: SiteQuality
SIO_000300: 5.944e1

QD
type: SiteQuality
SIO_000300: 2.213e1

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.05e-1

FS
type: SiteQuality
SIO_000300: 6.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.04e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47955
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4525
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.507386192342478e-4
allele num: 6634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10095
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9303
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.923e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

FS
type: SiteQuality
SIO_000300: 1.514e0

DP
type: SiteQuality
SIO_000300: 2.164565e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.328e1

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 2.51e0

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e-1