19-10421327-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421327
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421327
    reference: chr 19
allele count: 1
allele frequency: 8.374507997655138e-6
allele num: 119410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.260-9C>A
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.396-46C>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.396-9C>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.348-9C>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.502-9C>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.505-46C>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.608-9C>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.405-46C>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-10-9C>A
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21716
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17162
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12698
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8349
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD

19-10421333-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421333
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421333
    reference: chr 19
allele count: 2
allele frequency: 1.679825298168991e-5
allele num: 119060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.505-52G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.396-52G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.405-52G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.396-15G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.260-15G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.502-15G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-10-15G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.608-15G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.348-15G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41497
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2770
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

19-10421334-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421334
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421334
    reference: chr 19
allele count: 3
allele frequency: 2.521813688404701e-5
allele num: 118962
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.396-53C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.502-16C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.608-16C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.348-16C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.505-53C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.405-53C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-10-16C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.260-16C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.396-16C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21217
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4117
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

19-10421340-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421340
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421340
    reference: chr 19
allele count: 2
allele frequency: 1.691360530410662e-5
allele num: 118248
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.396-59A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-10-22A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.348-22A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.260-22A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.505-59A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.405-59A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.396-22A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.502-22A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.608-22A>G
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3991
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15095
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38885
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

19-10421341-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421341
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421341
    reference: chr 19
allele count: 1
allele frequency: 8.477018802027703e-6
allele num: 117966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-10-23C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.502-23C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.348-23C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.608-23C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.396-60C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.405-60C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.396-23C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.505-60C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.260-23C>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7587
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD

19-10421347-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421347
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421347
    reference: chr 19
allele count: 1
allele frequency: 8.551540132377842e-6
allele num: 116938
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.608-29G>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.260-29G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.348-29G>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.405-66G>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.505-66G>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-10-29G>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.396-66G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.396-29G>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.502-29G>C
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11293
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7682
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17640
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8934
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

19-10421347-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421347
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421347
    reference: chr 19
allele count: 4
allele frequency: 3.420616052951137e-5
allele num: 116938
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-10-29G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.405-66G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.396-29G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.608-29G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.260-29G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.505-66G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.348-29G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.396-66G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.502-29G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17640
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7682
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12407
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8934
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

19-10421348-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421348
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421348
    reference: chr 19
allele count: 1
allele frequency: 8.555051758063135e-6
allele num: 116890
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.396-30C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-10-30C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.348-30C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.396-67C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.505-67C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.608-30C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.405-67C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.260-30C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.502-30C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12345
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7775
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9059
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1799
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1712
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

19-10421349-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421349
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421349
    reference: chr 19
allele count: 3
allele frequency: 2.583311805734952e-5
allele num: 116130
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-10-31T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.396-68T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.502-31T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.396-31T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.405-68T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.260-31T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.505-68T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.348-31T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.608-31T>C
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10816
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5866
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29343
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/19-10421355-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421355
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421355
    reference: chr 19
allele count: 1
allele frequency: 8.748447150630764e-6
allele num: 114306
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.608-37T>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.260-37T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.348-37T>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.396-74T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.396-37T>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.502-37T>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.405-74T>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-10-37T>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.505-74T>G
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9486
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3684
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1575
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP

19-10421358-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421358
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421358
    reference: chr 19
allele count: 6
allele frequency: 5.328596802841919e-5
allele num: 112600
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-10-40A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.260-40A>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.396-40A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.505-77A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.405-77A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.396-77A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.348-40A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.502-40A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.608-40A>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13579
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10851
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7893
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4626
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1549
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13431
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP

19-10421368-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421368
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421368
    reference: chr 19
allele count: 1
allele frequency: 9.756859071927565e-6
allele num: 102492
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.260-50C>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.396-50C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.348-50C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.502-50C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.608-50C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-10-50C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.405-87C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.505-87C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.396-87C>G
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4718
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1645
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7492
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6976
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5694
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

19-10421370-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421370
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421369
    reference: chr 19
allele count: 243
allele frequency: 2.833488805970149e-3
allele num: 85760
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.502-53delC
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.260-53delC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.405-90delC
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.396-53delC
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.348-53delC
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.396-90delC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.505-90delC
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.608-53delC
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-10-53delC
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12481
  bin: 2.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 10469
  bin: 1.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 7.5e0
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 13167
  bin: 1.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4625
  bin: 3.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8760
  bin: 2.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 9.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 5133
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 9.75e1
  variant carriers: 196
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3782
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4426
  bin: 2.75e1
  variant carriers: 2
num of homozygotes: 1
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: TG
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

19-10421478-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421478
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421478
    reference: chr 19
allele count: 1
allele frequency: 9.59159009380575e-6
allele num: 104258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-11+51C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.259+51C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.504+51C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.347+51C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.395+51C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.395+51C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.501+51C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.404+51C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.607+51C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13539
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11159
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4196
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1387
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4876
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

19-10421484-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421484
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421484
    reference: chr 19
allele count: 1
allele frequency: 9.526168384552365e-6
allele num: 104974
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.395+45A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.404+45A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-11+45A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.501+45A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.395+45A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.347+45A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.259+45A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.607+45A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.504+45A>G
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10307
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14101
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1094
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1955
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2666
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

19-10421488-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421488
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421488
    reference: chr 19
allele count: 5
allele frequency: 4.757102353814245e-5
allele num: 105106
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.504+41G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.347+41G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.404+41G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.395+41G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-11+41G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.259+41G>A
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.395+41G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.607+41G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.501+41G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9864
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16523
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12973
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7899
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3357
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 9.75e1
  variant carriers: 5
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

19-10421491-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421491
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421491
    reference: chr 19
allele count: 1
allele frequency: 9.488746346832657e-6
allele num: 105388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-11+38C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.395+38C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.259+38C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.404+38C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.395+38C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.501+38C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.607+38C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.504+38C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.347+38C>G
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6364
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6712
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3255
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2024
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

19-10421498-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421498
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421498
    reference: chr 19
allele count: 2
allele frequency: 1.87913409500902e-5
allele num: 106432
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.504+31C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.404+31C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.395+31C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.395+31C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.259+31C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.501+31C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-11+31C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.347+31C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.607+31C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11117
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4468
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2914
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

19-10421502-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421502
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421502
    reference: chr 19
allele count: 2
allele frequency: 1.871852947232465e-5
allele num: 106846
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.504+27G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.395+27G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.404+27G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.501+27G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-11+27G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.259+27G>A
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.395+27G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.347+27G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.607+27G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2686
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3879
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-10421509-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421509
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421509
    reference: chr 19
allele count: 2
allele frequency: 1.840976453911154e-5
allele num: 108638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.504+20C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.259+20C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.501+20C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.395+20C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.404+20C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.395+20C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.607+20C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.347+20C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-11+20C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6521
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26893
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-10421510-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421510
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421510
    reference: chr 19
allele count: 1
allele frequency: 9.180038923365035e-6
allele num: 108932
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.259+19T>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.607+19T>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.395+19T>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.347+19T>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.395+19T>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.404+19T>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-11+19T>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.501+19T>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.504+19T>A
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5573
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12768
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6387
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1649
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

19-10421537-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421537
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421537
    reference: chr 19
allele count: 2
allele frequency: 1.731841640400402e-5
allele num: 115484
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.493C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.496C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.251C>T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.387C>T
  hgvsp: ENST00000393708.3:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.387C>T
  hgvsp: ENST00000452032.2:c.387C>T(p.%3D)
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.339C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.396C>T
  hgvsp: ENST00000541276.1:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-19C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.599C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15673
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro129Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

19-10421538-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421538
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421538
    reference: chr 19
allele count: 5
allele frequency: 4.323015735777279e-5
allele num: 115660
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.386C>T
  hgvsp: ENSP00000408510.1:p.Pro129Leu
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.386C>T
  hgvsp: ENSP00000377311.3:p.Pro129Leu
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.598C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.250C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.395C>T
  hgvsp: ENSP00000441093.1:p.Pro132Leu
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.492C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.495C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.338C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-20C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33321
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1671
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro129Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

19-10421544-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421544
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421544
    reference: chr 19
allele count: 1
allele frequency: 8.586786652698828e-6
allele num: 116458
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.380C>T
  hgvsp: ENSP00000408510.1:p.Pro127Leu
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.486C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.389C>T
  hgvsp: ENSP00000441093.1:p.Pro130Leu
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.489C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.380C>T
  hgvsp: ENSP00000377311.3:p.Pro127Leu
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-26C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.244C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.592C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.332C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro127Leu
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

19-10421560-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421560
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421560
    reference: chr 19
allele count: 1
allele frequency: 8.526748409761421e-6
allele num: 117278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-42C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.373C>T
  hgvsp: ENSP00000441093.1:p.His125Tyr
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.473C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.364C>T
  hgvsp: ENSP00000408510.1:p.His122Tyr
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.364C>T
  hgvsp: ENSP00000377311.3:p.His122Tyr
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.228C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.316C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.470C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.576C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33970
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1584
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1179
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His122Tyr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

19-10421587-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421587
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421587
    reference: chr 19
allele count: 58
allele frequency: 5.081300813008131e-4
allele num: 114144
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.446A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.443A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.337A>C
  hgvsp: ENSP00000408510.1:p.Thr113Pro
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.549A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-69A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.289A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.337A>C
  hgvsp: ENSP00000377311.3:p.Thr113Pro
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.346A>C
  hgvsp: ENSP00000441093.1:p.Thr116Pro
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.201A>C
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 32135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15842
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4393
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41677
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 5.25e1
  variant carriers: 4
hgvs: p.Thr113Pro
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum

19-10421589-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421589
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421589
    reference: chr 19
allele count: 1
allele frequency: 8.610297916307904e-6
allele num: 116140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.444C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.199C>T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-71C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.547C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.335C>T
  hgvsp: ENSP00000408510.1:p.Ser112Phe
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.287C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.344C>T
  hgvsp: ENSP00000441093.1:p.Ser115Phe
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.335C>T
  hgvsp: ENSP00000377311.3:p.Ser112Phe
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.441C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4386
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser112Phe
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

19-10421603-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421603
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421603
    reference: chr 19
allele count: 1
allele frequency: 8.745233847553084e-6
allele num: 114348
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.321C>T
  hgvsp: ENST00000393708.3:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.330C>T
  hgvsp: ENST00000541276.1:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.427C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.185C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.273C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.321C>T
  hgvsp: ENST00000452032.2:c.321C>T(p.%3D)
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.430C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.533C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-85C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5438
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala107Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

19-10421620-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421620
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421620
    reference: chr 19
allele count: 2
allele frequency: 1.790766806346477e-5
allele num: 111684
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.308-4C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.417-4C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.260-4C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.414-4C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-98-4C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.172-4C>G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.308-4C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.520-4C>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.317-4C>G
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6781
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7865
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
hgvs: c.308-4C>G
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

19-10421622-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421622
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421622
    reference: chr 19
allele count: 1
allele frequency: 8.98069151324652e-6
allele num: 111350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.317-6C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.417-6C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.172-6C>T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-98-6C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.308-6C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.520-6C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.260-6C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.414-6C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.308-6C>T
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4831
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 3.25e1
  variant carriers: 0
hgvs: c.308-6C>T
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

19-10421630-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421630
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421630
    reference: chr 19
allele count: 1
allele frequency: 9.091239681442962e-6
allele num: 109996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.260-14C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.520-14C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.417-14C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.317-14C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.172-14C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.308-14C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-98-14C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.414-14C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.308-14C>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4693
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31572
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2493
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

19-10421640-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421640
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421640
    reference: chr 19
allele count: 56
allele frequency: 5.206202818786955e-4
allele num: 107564
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.308-24G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-98-24G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.414-24G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.260-24G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.317-24G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.172-24G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.308-24G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.520-24G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.417-24G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5817
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19291
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11108
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12413
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 3.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25219
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

19-10421641-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421641
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421641
    reference: chr 19
allele count: 1
allele frequency: 9.335499169140573e-6
allele num: 107118
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.417-25C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.414-25C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.317-25C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.308-25C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.520-25C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.260-25C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.308-25C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.172-25C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-98-25C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12856
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6490
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3551
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2835
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11500
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

19-10421642-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421642
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421642
    reference: chr 19
allele count: 5
allele frequency: 4.664701272530507e-5
allele num: 107188
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.308-26G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.260-26G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.172-26G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.414-26G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.417-26G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-98-26G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.308-26G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.317-26G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.520-26G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10750
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6390
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4549
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1210
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23888
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP

19-10421645-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421645
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421645
    reference: chr 19
allele count: 2
allele frequency: 1.874625074985003e-5
allele num: 106688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.317-29C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-98-29C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.308-29C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.172-29C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.260-29C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.308-29C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.520-29C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.414-29C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.417-29C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10164
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13458
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7770
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1195
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

19-10421653-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10421653
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10421651
    reference: chr 19
allele count: 3
allele frequency: 2.873618268549206e-5
allele num: 104398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.520-39_520-38delCT
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.172-39_172-38delCT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-98-39_-98-38delCT
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.308-39_308-38delCT
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.308-39_308-38delCT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.260-39_260-38delCT
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.417-39_417-38delCT
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.317-39_317-38delCT
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.414-39_414-38delCT
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11534
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13772
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1898
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4587
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4260
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11776
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: CAG
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

19-10426014-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426014
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426013
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 26712
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.307+47delC
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.416+47delC
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.171+47delC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.259+47delC
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.413+47delC
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.519+47delC
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.316+47delC
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.576delC
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.307+47delC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-99+47delC
  variant of: http://identifiers.org/hgnc/30546
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 25483
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11471
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13223
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13333
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
reference allele: TG
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-10426018-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426018
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426018
    reference: chr 19
allele count: 65
allele frequency: 4.672897196261682e-3
allele num: 13910
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-99+44G>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.171+44G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.259+44G>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.413+44G>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.416+44G>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.316+44G>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.573G>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.519+44G>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.307+44G>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.307+44G>T
  variant of: http://identifiers.org/hgnc/30546
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3855
  bin: 1.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12434
  bin: 2.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12686
  bin: 1.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27624
  bin: 7.5e0
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 4.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 21183
  bin: 2.5e0
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 12664
  bin: 7.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 4.25e1
  variant carriers: 3
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

19-10426022-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426022
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426022
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 39458
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.259+40A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-99+40A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.413+40A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.307+40A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.519+40A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.316+40A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.416+40A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.569A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.307+40A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.171+40A>C
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13877
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8229
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29718
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4782
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26771
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8156
  bin: 7.5e0
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

19-10426024-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426024
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426024
    reference: chr 19
allele count: 16452
allele frequency: 3.191712257013153e-1
allele num: 51546
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.307+38A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.567A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.413+38A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.519+38A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-99+38A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.316+38A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.259+38A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.307+38A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.416+38A>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.171+38A>C
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 5243
  bin: 2.5e0
  variant carriers: 300
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 26435
  bin: 7.5e0
  variant carriers: 5397
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.25e1
  variant carriers: 233
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 2.75e1
  variant carriers: 592
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 2.25e1
  variant carriers: 1494
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15863
  bin: 1.25e1
  variant carriers: 7965
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5623
  bin: 1.75e1
  variant carriers: 4091
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 6.75e1
  variant carriers: 266
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 7.75e1
  variant carriers: 517
genotype quality: GenotypeQuality
  all individuals: 19242
  bin: 2.25e1
  variant carriers: 660
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 8.25e1
  variant carriers: 570
num of homozygotes: 2143
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-10426025-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426025
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426025
    reference: chr 19
allele count: 498
allele frequency: 8.688976515336566e-3
allele num: 57314
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.171+37T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.307+37T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.413+37T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.259+37T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.416+37T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.519+37T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-99+37T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.566T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.316+37T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.307+37T>C
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 2.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 2.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26142
  bin: 7.5e0
  variant carriers: 148
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15725
  bin: 1.25e1
  variant carriers: 231
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5377
  bin: 2.25e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 1.75e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1759
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6166
  bin: 3.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 22570
  bin: 2.25e1
  variant carriers: 7
num of homozygotes: 12
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-10426029-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426029
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426029
    reference: chr 19
allele count: 1
allele frequency: 1.646741099364358e-5
allele num: 60726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-99+33C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.307+33C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.259+33C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.519+33C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.171+33C>T
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.307+33C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.316+33C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.562C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.413+33C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.416+33C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14645
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5897
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1653
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

19-10426035-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426035
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426035
    reference: chr 19
allele count: 1
allele frequency: 1.444794405756061e-5
allele num: 69214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.519+27G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.316+27G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.556G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-99+27G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.307+27G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.171+27G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.259+27G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.307+27G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.413+27G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.416+27G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24033
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11556
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1145
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3964
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

19-10426051-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426051
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426051
    reference: chr 19
allele count: 1
allele frequency: 9.997600575861792e-6
allele num: 100024
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.259+11G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.307+11G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.416+11G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.413+11G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.316+11G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.307+11G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.519+11G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.540G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.171+11G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-99+11G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40380
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9644
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

19-10426052-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426052
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426052
    reference: chr 19
allele count: 1
allele frequency: 9.849305623953511e-6
allele num: 101530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.413+10G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.171+10G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.519+10G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.539G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.416+10G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.259+10G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.307+10G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.307+10G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-99+10G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.316+10G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8895
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

19-10426053-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426053
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426053
    reference: chr 19
allele count: 1
allele frequency: 9.650274067783526e-6
allele num: 103624
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.307+9C>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.538C>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.307+9C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-99+9C>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.316+9C>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.259+9C>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.413+9C>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.416+9C>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.171+9C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.519+9C>A
  variant of: http://identifiers.org/hgnc/30546
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

19-10426056-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426056
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426056
    reference: chr 19
allele count: 1
allele frequency: 9.307173969695841e-6
allele num: 107444
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.171+6A>T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.307+6A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.259+6A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.535A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-99+6A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.519+6A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.307+6A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.316+6A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.416+6A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.413+6A>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6648
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 3.25e1
  variant carriers: 0
hgvs: c.307+6A>T
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

19-10426057-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426057
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426057
    reference: chr 19
allele count: 1
allele frequency: 9.227475731738825e-6
allele num: 108372
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.307+5G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.316+5G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.259+5G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-99+5G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.534G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.519+5G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.307+5G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.171+5G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.416+5G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.413+5G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 7.75e1
  variant carriers: 0
hgvs: c.307+5G>A
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

19-10426066-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426066
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426066
    reference: chr 19
allele count: 4
allele frequency: 3.497971176717504e-5
allele num: 114352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.525G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.303G>A
  hgvsp: ENST00000452032.2:c.303G>A(p.%3D)
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-103G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.412G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.255G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.409G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.303G>A
  hgvsp: ENST00000393708.3:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.167G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.312G>A
  hgvsp: ENST00000541276.1:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.515G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46833
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu101Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

19-10426070-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426070
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426070
    reference: chr 19
allele count: 70
allele frequency: 6.04647145201693e-4
allele num: 115770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.521A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.511A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-107A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.405A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.299A>G
  hgvsp: ENSP00000377311.3:p.Asp100Gly
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.308A>G
  hgvsp: ENSP00000441093.1:p.Asp103Gly
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.299A>G
  hgvsp: ENSP00000408510.1:p.Asp100Gly
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.163A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.408A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.251A>G
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7685
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47138
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4132
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp100Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS

19-10426071-CCACCCCGTGGCGCTGGGCCAGGTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426071
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426047
    reference: chr 19
allele count: 1
allele frequency: 8.61489687968435e-6
allele num: 116078
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsp: ENSP00000441093.1:p.His95_Val102del
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsp: ENSP00000377311.3:p.His92_Val99del
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsp: ENSP00000408510.1:p.His92_Val99del
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His92_Val99del
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: CCACCCCGTGGCGCTGGGCCAGGTG
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

19-10426088-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426088
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426088
    reference: chr 19
allele count: 1
allele frequency: 8.452228007302725e-6
allele num: 118312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.145C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.281C>T
  hgvsp: ENSP00000408510.1:p.Ala94Val
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.387C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.290C>T
  hgvsp: ENSP00000441093.1:p.Ala97Val
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.390C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.493C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.233C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.281C>T
  hgvsp: ENSP00000377311.3:p.Ala94Val
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-125C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.503C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala94Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP

19-10426098-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426098
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426098
    reference: chr 19
allele count: 1
allele frequency: 8.415666604951778e-6
allele num: 118826
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.483C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.223C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.271C>T
  hgvsp: ENSP00000377311.3:p.Leu91Phe
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-135C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.271C>T
  hgvsp: ENSP00000408510.1:p.Leu91Phe
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.280C>T
  hgvsp: ENSP00000441093.1:p.Leu94Phe
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.135C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.380C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.377C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.493C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46758
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9413
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu91Phe
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

19-10426102-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426102
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426102
    reference: chr 19
allele count: 1
allele frequency: 8.408024618696084e-6
allele num: 118934
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.267T>C
  hgvsp: ENST00000452032.2:c.267T>C(p.%3D)
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.376T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.276T>C
  hgvsp: ENST00000541276.1:c.276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.373T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.489T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.267T>C
  hgvsp: ENST00000393708.3:c.267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.219T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.479T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-139T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.131T>C
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9457
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn89Asn
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-10426103-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426103
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426103
    reference: chr 19
allele count: 1
allele frequency: 8.405339071378139e-6
allele num: 118972
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-140A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.478A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.218A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.275A>G
  hgvsp: ENSP00000441093.1:p.Asn92Ser
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.375A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.266A>G
  hgvsp: ENSP00000377311.3:p.Asn89Ser
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.130A>G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.266A>G
  hgvsp: ENSP00000408510.1:p.Asn89Ser
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.372A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.488A>G
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9469
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1269
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49917
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn89Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

19-10426111-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426111
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426111
    reference: chr 19
allele count: 2
allele frequency: 1.677767897589047e-5
allele num: 119206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.267C>T
  hgvsp: ENST00000541276.1:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.470C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.122C>T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-148C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.258C>T
  hgvsp: ENST00000452032.2:c.258C>T(p.%3D)
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.480C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.364C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.258C>T
  hgvsp: ENST00000393708.3:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.210C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.367C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9781
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4483
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val86Val
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-10426113-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426113
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426113
    reference: chr 19
allele count: 1
allele frequency: 8.382932349735938e-6
allele num: 119290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.120G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.478G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-150G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.256G>A
  hgvsp: ENSP00000377311.3:p.Val86Ile
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.256G>A
  hgvsp: ENSP00000408510.1:p.Val86Ile
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.265G>A
  hgvsp: ENSP00000441093.1:p.Val89Ile
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.362G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.468G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.208G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.365G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49998
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val86Ile
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

19-10426114-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426114
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426114
    reference: chr 19
allele count: 1
allele frequency: 8.381948635418762e-6
allele num: 119304
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.255A>G
  hgvsp: ENST00000393708.3:c.255A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.255A>G
  hgvsp: ENST00000452032.2:c.255A>G(p.%3D)
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.467A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-151A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.477A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.364A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.119A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.361A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.207A>G
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.264A>G
  hgvsp: ENST00000541276.1:c.264A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg85Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

19-10426115-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426115
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426116
    reference: chr 19
allele count: 1
allele frequency: 8.383775717232013e-6
allele num: 119278
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.362dupA
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.205dupA
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.253dupA
  hgvsp: ENSP00000377311.3:p.Arg85LysfsTer22
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-153dupA
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.465dupA
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.117dupA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.475dupA
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.359dupA
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.253dupA
  hgvsp: ENSP00000408510.1:p.Arg85LysfsTer22
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.262dupA
  hgvsp: ENSP00000441093.1:p.Arg88LysfsTer22
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg85LysfsTer22
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ

19-10426121-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426121
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426121
    reference: chr 19
allele count: 1
allele frequency: 8.37548996616302e-6
allele num: 119396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.257G>A
  hgvsp: ENSP00000441093.1:p.Ser86Asn
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.354G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.470G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.460G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.248G>A
  hgvsp: ENSP00000377311.3:p.Ser83Asn
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.112G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.200G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.248G>A
  hgvsp: ENSP00000408510.1:p.Ser83Asn
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-158G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.357G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10001
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser83Asn
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP

19-10426126-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426126
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426126
    reference: chr 19
allele count: 1
allele frequency: 8.381246123673667e-6
allele num: 119314
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.243A>T
  hgvsp: ENST00000393708.3:c.243A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.465A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.195A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.243A>T
  hgvsp: ENST00000452032.2:c.243A>T(p.%3D)
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.352A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.252A>T
  hgvsp: ENST00000541276.1:c.252A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.455A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-163A>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.107A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.349A>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro81Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-10426129-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426129
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426129
    reference: chr 19
allele count: 9
allele frequency: 7.541604518259063e-5
allele num: 119338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.349C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.249C>T
  hgvsp: ENST00000541276.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.104C>T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.240C>T
  hgvsp: ENST00000452032.2:c.240C>T(p.%3D)
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.240C>T
  hgvsp: ENST00000393708.3:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.462C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.346C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.192C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.452C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-166C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10099
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49825
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile80Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD

19-10426138-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426138
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426138
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 119196
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.231C>T
  hgvsp: ENST00000393708.3:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.231C>T
  hgvsp: ENST00000452032.2:c.231C>T(p.%3D)
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.95C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.337C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.453C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.443C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.340C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-175C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.240C>T
  hgvsp: ENST00000541276.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.183C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly77Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

19-10426146-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426146
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426146
    reference: chr 19
allele count: 1
allele frequency: 8.406752303450132e-6
allele num: 118952
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.223C>T
  hgvsp: ENSP00000377311.3:p.Arg75Cys
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.445C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.232C>T
  hgvsp: ENSP00000441093.1:p.Arg78Cys
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.223C>T
  hgvsp: ENSP00000408510.1:p.Arg75Cys
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.329C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.332C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.435C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-183C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.87C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.175C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 48822
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg75Cys
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-10426151-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426151
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426151
    reference: chr 19
allele count: 1
allele frequency: 8.434832484226864e-6
allele num: 118556
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.430T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.82T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.227T>C
  hgvsp: ENSP00000441093.1:p.Val76Ala
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.218T>C
  hgvsp: ENSP00000377311.3:p.Val73Ala
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-188T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000267303
  ensembl protein: ENSP00000467814
  ensembl transcript: ENST00000586529
  gene symbol: CTD-2369P2.12
  hgvsc: ENST00000586529.1:c.*1372T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.170T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.218T>C
  hgvsp: ENSP00000408510.1:p.Val73Ala
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.440T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.324T>C
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.327T>C
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val73Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

19-10426153-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426153
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426153
    reference: chr 19
allele count: 6
allele frequency: 5.062863893342334e-5
allele num: 118510
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000267303
  ensembl protein: ENSP00000467814
  ensembl transcript: ENST00000586529
  gene symbol: CTD-2369P2.12
  hgvsc: ENST00000586529.1:c.*1370C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.322C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.80C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.428C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.325C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.216C>T
  hgvsp: ENST00000452032.2:c.216C>T(p.%3D)
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-190C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.225C>T
  hgvsp: ENST00000541276.1:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.216C>T
  hgvsp: ENST00000393708.3:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.438C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.168C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10171
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe72Phe
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

19-10426158-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426158
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426158
    reference: chr 19
allele count: 1
allele frequency: 8.477593719798572e-6
allele num: 117958
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000267303
  ensembl protein: ENSP00000467814
  ensembl transcript: ENST00000586529
  gene symbol: CTD-2369P2.12
  hgvsc: ENST00000586529.1:c.*1365G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.220G>A
  hgvsp: ENSP00000441093.1:p.Val74Met
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.75G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.163G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.211G>A
  hgvsp: ENSP00000377311.3:p.Val71Met
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.433G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.320G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.317G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.211G>A
  hgvsp: ENSP00000408510.1:p.Val71Met
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.423G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-195G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42820
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10014
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val71Met
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

19-10426159-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426159
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426159
    reference: chr 19
allele count: 1
allele frequency: 8.47860001356576e-6
allele num: 117944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.74G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.219G>A
  hgvsp: ENST00000541276.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-196G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.316G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.319G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.162G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000267303
  ensembl protein: ENSP00000467814
  ensembl transcript: ENST00000586529
  gene symbol: CTD-2369P2.12
  hgvsc: ENST00000586529.1:c.*1364G>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.210G>A
  hgvsp: ENST00000452032.2:c.210G>A(p.%3D)
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.432G>A
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.210G>A
  hgvsp: ENST00000393708.3:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.422G>A
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2979
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val70Val
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

19-10426162-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10426162
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 10426162
    reference: chr 19
allele count: 4
allele frequency: 3.40280731603573e-5
allele num: 117550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167807
  ensembl transcript: ENST00000493771
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000493771.2:n.71C>T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000467188
  ensembl transcript: ENST00000494368
  gene symbol: FDX1L
  hgvsc: ENST00000494368.1:c.-199C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000267303
  ensembl protein: ENSP00000467814
  ensembl transcript: ENST00000586529
  gene symbol: CTD-2369P2.12
  hgvsc: ENST00000586529.1:c.*1361C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000343376
  gene symbol: FDX1L
  hgvsc: ENST00000343376.4:n.316C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000441093
  ensembl transcript: ENST00000541276
  gene symbol: FDX1L
  hgvsc: ENST00000541276.1:c.216C>T
  hgvsp: ENST00000541276.1:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000492239
  gene symbol: FDX1L
  hgvsc: ENST00000492239.1:n.159C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000267673
  ensembl protein: ENSP00000377311
  ensembl transcript: ENST00000393708
  gene symbol: FDX1L
  hgvsc: ENST00000393708.3:c.207C>T
  hgvsp: ENST00000393708.3:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000486454
  gene symbol: FDX1L
  hgvsc: ENST00000486454.1:n.429C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000460631
  gene symbol: FDX1L
  hgvsc: ENST00000460631.1:n.419C>T
  variant of: http://identifiers.org/hgnc/30546
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167807
  ensembl protein: ENSP00000408510
  ensembl transcript: ENST00000452032
  gene symbol: CTD-2369P2.10
  hgvsc: ENST00000452032.2:c.207C>T
  hgvsp: ENST00000452032.2:c.207C>T(p.%3D)
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000267673
  ensembl transcript: ENST00000453681
  gene symbol: FDX1L
  hgvsc: ENST00000453681.1:n.313C>T
  variant of: http://identifiers.org/hgnc/30546
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn69Asn
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

GenotypeQuality
all individuals: 242
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1891
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42581
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52545992616774e-5
allele num: 65554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.8e-1

DP
type: SiteQuality
SIO_000300: 1.651431e6

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.715e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

QD
type: SiteQuality
SIO_000300: 1.151e1

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2006
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529847321237341e-5
allele num: 65366
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.119202056051891e-5
allele num: 16342
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6346
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.392e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.54e-1

DP
type: SiteQuality
SIO_000300: 1.637652e6

FS
type: SiteQuality
SIO_000300: 1.443e0

MQ
type: SiteQuality
SIO_000300: 5.831e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e0

QD
type: SiteQuality
SIO_000300: 1.555e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e0

GenotypeQuality
all individuals: 155
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 409
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variant carriers: 0

GenotypeQuality
all individuals: 1999
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.121449559255632e-5
allele num: 16336
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531065315246348e-5
allele num: 65314
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.887284951552304e-5
allele num: 10114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6348
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.093e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.03e-1

DP
type: SiteQuality
SIO_000300: 1.632998e6

MQRankSum
type: SiteQuality
SIO_000300: -4.53e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

QD
type: SiteQuality
SIO_000300: 1.888e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.73e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.954e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

GenotypeQuality
all individuals: 494
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1923
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.079576250307958e-5
allele num: 64944
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10000
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 1.133e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -9.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.570000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.914e0

DP
type: SiteQuality
SIO_000300: 1.592855e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e-1

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 37627
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variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9956
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.543305142292734e-5
allele num: 64796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.63e-1

MQ
type: SiteQuality
SIO_000300: 5.812e1

FS
type: SiteQuality
SIO_000300: 6.673e0

MQRankSum
type: SiteQuality
SIO_000300: -1.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.94e0

VQSLOD
type: SiteQuality
SIO_000300: -2.527e0

DP
type: SiteQuality
SIO_000300: 1.577158e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 9.5e-1

GenotypeQuality
all individuals: 763
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1697
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 32742
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 6930
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 973
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variant carriers: 1

GenotypeQuality
all individuals: 1817
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557001837262168e-5
allele num: 64226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.96e-1

DP
type: SiteQuality
SIO_000300: 1.510858e6

QD
type: SiteQuality
SIO_000300: 1.261e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.38e-1

FS
type: SiteQuality
SIO_000300: 3.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.56e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 208
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 7.5e0
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 934
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.671005511786504e-5
allele num: 64226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.178689297501179e-4
allele num: 8484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6178
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.510858e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.56e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

FS
type: SiteQuality
SIO_000300: 3.55e0

MQRankSum
type: SiteQuality
SIO_000300: 5.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.38e-1

QD
type: SiteQuality
SIO_000300: 1.261e1

GenotypeQuality
all individuals: 1723
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 485
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64192
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.023122570083896e-4
allele num: 9774
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.52e0

FS
type: SiteQuality
SIO_000300: 9.638999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.714e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.033e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 1.508658e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeQuality
all individuals: 968
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2255
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variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6090
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11232
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16124
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.138731952291275e-4
allele num: 9558
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 1.457582e6

FS
type: SiteQuality
SIO_000300: 7.775e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.68e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 964
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 890
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.590280207372539e-5
allele num: 62882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16026
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.108e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.15e-1

FS
type: SiteQuality
SIO_000300: 3.203e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

QD
type: SiteQuality
SIO_000300: 1.003e1

DP
type: SiteQuality
SIO_000300: 1.38034e6

GenotypeQuality
all individuals: 479
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4873
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2815
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10976
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5968
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.673986649898423e-5
allele num: 62022
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.97e-1

MQ
type: SiteQuality
SIO_000300: 5.891e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

FS
type: SiteQuality
SIO_000300: 1.838e0

VQSLOD
type: SiteQuality
SIO_000300: 9.26e-1

QD
type: SiteQuality
SIO_000300: 1.259e1

DP
type: SiteQuality
SIO_000300: 1.324065e6

GenotypeQuality
all individuals: 1420
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 9.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2642
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9822
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.700616456714018e-5
allele num: 14924
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56672
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7692
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.406e0

MQRankSum
type: SiteQuality
SIO_000300: 1.82e0

MQ
type: SiteQuality
SIO_000300: 5.748e1

FS
type: SiteQuality
SIO_000300: 5.111e0

VQSLOD
type: SiteQuality
SIO_000300: -1.367e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.4e-3

QD
type: SiteQuality
SIO_000300: 1.838e1

DP
type: SiteQuality
SIO_000300: 1.224853e6

GenotypeQuality
all individuals: 3625
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 905
bin: 7.25e1
variant carriers: 6

GenotypeQuality
all individuals: 6131
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7416
bin: 2.25e1
variant carriers: 4

GenotypeQuality
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bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 4976
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1824
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1493
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2876
bin: 1.25e1
variant carriers: 4

GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3402
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1012
bin: 7.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2800
bin: 5.25e1
variant carriers: 6

GenotypeQuality
all individuals: 668
bin: 8.25e1
variant carriers: 5

Latino
type: Population
allele count: 12
allele frequency: 1.523229246001523e-3
allele num: 7878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 18
allele frequency: 4.162812210915819e-3
allele num: 4324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 6.361323155216285e-4
allele num: 6288
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.192338387869114e-4
allele num: 12530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 205
allele frequency: 4.298054344179805e-3
allele num: 47696
num of homozygotes: 1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

QD
type: SiteQuality
SIO_000300: 1.59e1

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.76e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.228022e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.42e0

GenotypeQuality
all individuals: 6228
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2832
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1900
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variant carriers: 0

GenotypeQuality
all individuals: 1364
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4142
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 335
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 768
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variant carriers: 0

GenotypeQuality
all individuals: 12454
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variant carriers: 0

GenotypeQuality
all individuals: 5765
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variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.759448237032867e-5
allele num: 56836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7838
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.132274e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.757e0

MQRankSum
type: SiteQuality
SIO_000300: 1.9e0

FS
type: SiteQuality
SIO_000300: 2.632e0

QD
type: SiteQuality
SIO_000300: 4.44e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

GenotypeQuality
all individuals: 5709
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1348
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3985
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variant carriers: 0

GenotypeQuality
all individuals: 7020
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variant carriers: 0

GenotypeQuality
all individuals: 218
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 425
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GenotypeQuality
all individuals: 4331
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.658676255160474e-5
allele num: 15018
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4912
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.28e-1

DP
type: SiteQuality
SIO_000300: 1.150912e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.096e0

QD
type: SiteQuality
SIO_000300: 1.217e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1350
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variant carriers: 0

GenotypeQuality
all individuals: 5095
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 4.816027740319784e-4
allele num: 10382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7928
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4934
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15028
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.171302e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.12e-1

QD
type: SiteQuality
SIO_000300: 1.186e1

VQSLOD
type: SiteQuality
SIO_000300: 3.21e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.763e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4521
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 518
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7954
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.737800639510635e-5
allele num: 57544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4938
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15056
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.456e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

QD
type: SiteQuality
SIO_000300: 3.44e0

MQRankSum
type: SiteQuality
SIO_000300: -3.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.371e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.632e0

DP
type: SiteQuality
SIO_000300: 1.191134e6

GenotypeQuality
all individuals: 699
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4843
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GenotypeQuality
all individuals: 433
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GenotypeQuality
all individuals: 1433
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GenotypeQuality
all individuals: 1165
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variant carriers: 2

GenotypeQuality
all individuals: 1214
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GenotypeQuality
all individuals: 1434
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GenotypeQuality
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GenotypeQuality
all individuals: 27270
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GenotypeQuality
all individuals: 563
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4996
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15110
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.907668828691339e-4
allele num: 10484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8072
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58158
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8846
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e-1

QD
type: SiteQuality
SIO_000300: 1.559e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.062e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

FS
type: SiteQuality
SIO_000300: 2.018e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-1

DP
type: SiteQuality
SIO_000300: 1.233021e6

GenotypeQuality
all individuals: 945
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 145
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GenotypeQuality
all individuals: 652
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GenotypeQuality
all individuals: 680
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variant carriers: 0

GenotypeQuality
all individuals: 1447
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GenotypeQuality
all individuals: 7183
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4931
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1169
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 2
allele frequency: 2.247696111485727e-4
allele num: 8898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8130
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5010
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58386
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-1

DP
type: SiteQuality
SIO_000300: 1.260344e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.06e-1

QD
type: SiteQuality
SIO_000300: 1.201e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.42e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.41e-1

GenotypeQuality
all individuals: 1170
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1510
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5148
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9056
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.36157052574963e-5
allele num: 59496
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

DP
type: SiteQuality
SIO_000300: 1.309372e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e-1

FS
type: SiteQuality
SIO_000300: 1.379e0

QD
type: SiteQuality
SIO_000300: 1.2e1

MQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.01e-1

GenotypeQuality
all individuals: 176
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9078
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.675884028825205e-5
allele num: 59670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5158
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.211e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

DP
type: SiteQuality
SIO_000300: 1.314484e6

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

QD
type: SiteQuality
SIO_000300: 1.591e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.458e0

GenotypeQuality
all individuals: 1654
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 375
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.13361744798195e-5
allele num: 63824
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15784
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -8.778e-1

DP
type: SiteQuality
SIO_000300: 1.437936e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.41e-1

QD
type: SiteQuality
SIO_000300: 3.24e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

FS
type: SiteQuality
SIO_000300: 2.706e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

GenotypeQuality
all individuals: 42658
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1565
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variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63928
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5474
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.063803929511849e-4
allele num: 9874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15804
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.606e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 4.303e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-1

DP
type: SiteQuality
SIO_000300: 1.439117e6

VQSLOD
type: SiteQuality
SIO_000300: 2.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-1

GenotypeQuality
all individuals: 1676
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
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GenotypeQuality
all individuals: 6195
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variant carriers: 0

GenotypeQuality
all individuals: 258
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GenotypeQuality
all individuals: 119
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GenotypeQuality
all individuals: 376
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 43983
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variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9966
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552843256001739e-5
allele num: 64398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15916
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.102e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.139999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.450235e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.254e0

MQ
type: SiteQuality
SIO_000300: 5.85e1

QD
type: SiteQuality
SIO_000300: 1.331e1

MQRankSum
type: SiteQuality
SIO_000300: -2.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.208e-1

GenotypeQuality
all individuals: 6274
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 248
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GenotypeQuality
all individuals: 141
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10086
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.2672348959639e-5
allele num: 15956
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.768e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.461858e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.317e0

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

QD
type: SiteQuality
SIO_000300: 6.78e0

GenotypeQuality
all individuals: 270
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1392
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GenotypeQuality
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variant carriers: 17

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 6

GenotypeQuality
all individuals: 5665
bin: 6.75e1
variant carriers: 4

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15366
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.847991505928154e-5
allele num: 11302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 35
allele frequency: 5.531148266380101e-4
allele num: 63278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 1.744186046511628e-3
allele num: 5160
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.172607879924953e-4
allele num: 8528
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 1.029018316526034e-3
allele num: 9718
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.525252525252525e-3
allele num: 792
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.879e2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.483e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.57e0

QD
type: SiteQuality
SIO_000300: 4.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.247e0

FS
type: SiteQuality
SIO_000300: 3.22766e2

DP
type: SiteQuality
SIO_000300: 1.465406e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 221
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GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550868486352357e-5
allele num: 64480
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.148e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.384e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.88e-1

DP
type: SiteQuality
SIO_000300: 1.438422e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63688
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9946
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11286
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167406023815083e-4
allele num: 8566
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.381e0

FS
type: SiteQuality
SIO_000300: 5.315e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.45e-1

QD
type: SiteQuality
SIO_000300: 1.169e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

DP
type: SiteQuality
SIO_000300: 1.40015e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.37e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5406
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.468428781204112e-4
allele num: 13620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62432
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

MQRankSum
type: SiteQuality
SIO_000300: 7.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

DP
type: SiteQuality
SIO_000300: 1.336042e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.824e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

QD
type: SiteQuality
SIO_000300: 1.169e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13508
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.96700143472023e-5
allele num: 11152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62260
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.236e0

FS
type: SiteQuality
SIO_000300: 3.384e0

DP
type: SiteQuality
SIO_000300: 1.325212e6

MQ
type: SiteQuality
SIO_000300: 5.855e1

MQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

QD
type: SiteQuality
SIO_000300: 1.347e1

VQSLOD
type: SiteQuality
SIO_000300: -1.045e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.62321851767685e-5
allele num: 61606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11096
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13122
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

FS
type: SiteQuality
SIO_000300: 1.958e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.98e-1

MQ
type: SiteQuality
SIO_000300: 5.796e1

QD
type: SiteQuality
SIO_000300: 1.082e1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.741e0

DP
type: SiteQuality
SIO_000300: 1.282423e6

VQSLOD
type: SiteQuality
SIO_000300: -1.773e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8318
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 8.195228555818613e-4
allele num: 10982
num of homozygotes: 0

African
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allele count: 41
allele frequency: 4.318516958078787e-3
allele num: 9494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.90720253624385e-5
allele num: 60562
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.94e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.371e1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

DP
type: SiteQuality
SIO_000300: 1.217267e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5212
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.658264791721942e-5
allele num: 60304
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8282
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9450
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VQSLOD
type: SiteQuality
SIO_000300: 4.9e-1

BaseQRankSum
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60392
num of homozygotes: 0

South Asian
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allele count: 5
allele frequency: 4.12609341475491e-4
allele num: 12118
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 10978
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.943e1

DP
type: SiteQuality
SIO_000300: 1.201701e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.678133915086424e-4
allele num: 11918
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10958
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8270
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.843e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1251
bin: 9.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.692906720839682e-5
allele num: 59070
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9284
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.794687724335966e-4
allele num: 11144
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.901e1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

MQ
type: SiteQuality
SIO_000300: 6.06e1

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

FS
type: SiteQuality
SIO_000300: 3.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.66e-1

DP
type: SiteQuality
SIO_000300: 1.139686e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

GenotypeQuality
all individuals: 34
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1194
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 35
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2992
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1934
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.14013e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.8e0

QD
type: SiteQuality
SIO_000300: 1.13e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.38e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeQuality
all individuals: 12
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 3294
bin: 1.75e1
variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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variant carriers: 11

GenotypeQuality
all individuals: 23
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variant carriers: 16

GenotypeQuality
all individuals: 26
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variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 100
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.936507936507936e-3
allele num: 756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.411764705882353e-3
allele num: 680
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.0e-3
allele num: 1250
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 1.162790697674419e-2
allele num: 774
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 6.625441696113074e-3
allele num: 2264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 27
allele frequency: 3.339104625278259e-3
allele num: 8086
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.169e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

FS
type: SiteQuality
SIO_000300: 7.2127e1

DP
type: SiteQuality
SIO_000300: 5.06873e5

VQSLOD
type: SiteQuality
SIO_000300: -2.008e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.734e0

MQ
type: SiteQuality
SIO_000300: 5.519e1

MQRankSum
type: SiteQuality
SIO_000300: -1.377e0

QD
type: SiteQuality
SIO_000300: 1.37e0

GenotypeQuality
all individuals: 2675
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 245
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variant carriers: 1

GenotypeQuality
all individuals: 2614
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2948
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20224
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3354
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.49e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

QD
type: SiteQuality
SIO_000300: 5.06e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.744e0

DP
type: SiteQuality
SIO_000300: 5.80143e5

GenotypeQuality
all individuals: 379
bin: 5.75e1
variant carriers: 316

GenotypeQuality
all individuals: 1807
bin: 3.75e1
variant carriers: 563

GenotypeQuality
all individuals: 3449
bin: 2.5e0
variant carriers: 101

GenotypeQuality
all individuals: 2745
bin: 6.25e1
variant carriers: 278

GenotypeQuality
all individuals: 4797
bin: 7.5e0
variant carriers: 206

GenotypeQuality
all individuals: 465
bin: 7.25e1
variant carriers: 315

GenotypeQuality
all individuals: 3067
bin: 2.75e1
variant carriers: 366

GenotypeQuality
all individuals: 3177
bin: 3.25e1
variant carriers: 622

GenotypeQuality
all individuals: 691
bin: 5.25e1
variant carriers: 559

GenotypeQuality
all individuals: 1305
bin: 1.25e1
variant carriers: 264

GenotypeQuality
all individuals: 461
bin: 9.25e1
variant carriers: 435

GenotypeQuality
all individuals: 562
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variant carriers: 540

GenotypeQuality
all individuals: 12168
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variant carriers: 12133

GenotypeQuality
all individuals: 1292
bin: 1.75e1
variant carriers: 484

GenotypeQuality
all individuals: 780
bin: 4.25e1
variant carriers: 431

GenotypeQuality
all individuals: 934
bin: 4.75e1
variant carriers: 615

South Asian
type: Population
allele count: 2790
allele frequency: 2.998710232158212e-1
allele num: 9304
num of homozygotes: 386

East Asian
type: Population
allele count: 1291
allele frequency: 3.703384968445209e-1
allele num: 3486
num of homozygotes: 163

Latino
type: Population
allele count: 2904
allele frequency: 5.537757437070938e-1
allele num: 5244
num of homozygotes: 677

European (Non-Finnish)
type: Population
allele count: 7300
allele frequency: 2.784134248665141e-1
allele num: 26220
num of homozygotes: 679

African
type: Population
allele count: 1081
allele frequency: 2.825405122843701e-1
allele num: 3826
num of homozygotes: 107

Other
type: Population
allele count: 147
allele frequency: 3.638613861386139e-1
allele num: 404
num of homozygotes: 21

European (Finnish)
type: Population
allele count: 939
allele frequency: 3.066623122142391e-1
allele num: 3062
num of homozygotes: 110

FS
type: SiteQuality
SIO_000300: 2.049e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.17e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.52e0

DP
type: SiteQuality
SIO_000300: 6.46162e5

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.948e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-2

GenotypeQuality
all individuals: 4243
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 4851
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1613
bin: 5.25e1
variant carriers: 10

GenotypeQuality
all individuals: 264
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variant carriers: 5

GenotypeQuality
all individuals: 409
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GenotypeQuality
all individuals: 2419
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variant carriers: 3

GenotypeQuality
all individuals: 413
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GenotypeQuality
all individuals: 1276
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variant carriers: 5

GenotypeQuality
all individuals: 666
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GenotypeQuality
all individuals: 4431
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GenotypeQuality
all individuals: 108
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GenotypeQuality
all individuals: 623
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GenotypeQuality
all individuals: 90
bin: 8.75e1
variant carriers: 8

GenotypeQuality
all individuals: 794
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variant carriers: 572

GenotypeQuality
all individuals: 2145
bin: 1.75e1
variant carriers: 8

GenotypeQuality
all individuals: 4324
bin: 7.5e0
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 6.859651529702291e-4
allele num: 29156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3996
num of homozygotes: 0

Latino
type: Population
allele count: 36
allele frequency: 5.787781350482315e-3
allele num: 6220
num of homozygotes: 0

African
type: Population
allele count: 440
allele frequency: 1.050119331742243e-1
allele num: 4190
num of homozygotes: 12

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.829654782116582e-4
allele num: 3534
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.136752136752137e-3
allele num: 468
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.54e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

QD
type: SiteQuality
SIO_000300: 1.906e1

VQSLOD
type: SiteQuality
SIO_000300: 1.48e-1

FS
type: SiteQuality
SIO_000300: 5.194e0

DP
type: SiteQuality
SIO_000300: 6.75354e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

GenotypeQuality
all individuals: 2085
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 24094
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GenotypeQuality
all individuals: 119
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GenotypeQuality
all individuals: 8646
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GenotypeQuality
all individuals: 2845
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GenotypeQuality
all individuals: 100
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 116
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GenotypeQuality
all individuals: 822
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GenotypeQuality
all individuals: 307
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3678
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.201434242540658e-5
allele num: 31236
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10076
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4192
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.749e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.87e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.17e-1

QD
type: SiteQuality
SIO_000300: 1.125e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

DP
type: SiteQuality
SIO_000300: 7.27892e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.1e-3

GenotypeQuality
all individuals: 233
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16557
bin: 6.25e1
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GenotypeQuality
all individuals: 5056
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 244
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GenotypeQuality
all individuals: 246
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GenotypeQuality
all individuals: 609
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GenotypeQuality
all individuals: 373
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GenotypeQuality
all individuals: 151
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GenotypeQuality
all individuals: 22288
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3407
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variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7074
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5330
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.748007694421545e-5
allele num: 36390
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.28429e5

QD
type: SiteQuality
SIO_000300: 8.949999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.184e0

FS
type: SiteQuality
SIO_000300: 5.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.28e-1

MQ
type: SiteQuality
SIO_000300: 5.889e1

GenotypeQuality
all individuals: 516
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39704
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GenotypeQuality
all individuals: 76
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GenotypeQuality
all individuals: 215
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GenotypeQuality
all individuals: 699
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GenotypeQuality
all individuals: 3332
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GenotypeQuality
all individuals: 915
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GenotypeQuality
all individuals: 288
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GenotypeQuality
all individuals: 310
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GenotypeQuality
all individuals: 359
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GenotypeQuality
all individuals: 1276
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GenotypeQuality
all individuals: 345
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5786
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.27258844489692e-4
allele num: 7858
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54776
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.08e-1

MQ
type: SiteQuality
SIO_000300: 5.874e1

QD
type: SiteQuality
SIO_000300: 1.447e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9954
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.797268152408339e-5
allele num: 55640
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7526
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5864
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -1.943e0

ReadPosRankSum
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SIO_000300: -1.21e-1

ClippingRankSum
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MQRankSum
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FS
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SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -1.6e-3

DP
type: SiteQuality
SIO_000300: 1.15956e6

QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56806
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7676
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8230
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.118451025056947e-5
allele num: 14048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5926
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

FS
type: SiteQuality
SIO_000300: 1.1524e1

DP
type: SiteQuality
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VQSLOD
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SIO_000300: -1.659e0

QD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.55e-1

MQ
type: SiteQuality
SIO_000300: 5.878e1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6114
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.259128682951398e-4
allele num: 7942
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58990
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.209429e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e0

VQSLOD
type: SiteQuality
SIO_000300: -1.704e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

QD
type: SiteQuality
SIO_000300: 7.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.739e0

MQRankSum
type: SiteQuality
SIO_000300: -1.482e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7990
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.68010752688172e-5
allele num: 59520
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

QD
type: SiteQuality
SIO_000300: 2.006e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.203e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.253e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.46e-1

MQ
type: SiteQuality
SIO_000300: 5.58e1

DP
type: SiteQuality
SIO_000300: 1.218933e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11102
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

African
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allele count: 4
allele frequency: 4.273504273504274e-4
allele num: 9360
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62684
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.58e-1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
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QD
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BaseQRankSum
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.07e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

East Asian
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South Asian
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African
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allele frequency: 6.384760309817878e-3
allele num: 9554
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Latino
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allele frequency: 7.145409074669524e-4
allele num: 11196
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.575994452499527e-5
allele num: 63452
num of homozygotes: 0

MQRankSum
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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DP
type: SiteQuality
SIO_000300: 1.290981e6

BaseQRankSum
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FS
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SIO_000300: 1.49e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 9604
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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ClippingRankSum
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MQRankSum
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QD
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ReadPosRankSum
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FS
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MQ
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11368
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.164958061509786e-4
allele num: 8584
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9946
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16166
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64842
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.769e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.360000000000001e-1

QD
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MQ
type: SiteQuality
SIO_000300: 5.859e1

VQSLOD
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SIO_000300: -2.863e0

MQRankSum
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SIO_000300: -6.68e-1

InbreedingCoeff
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SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.92e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.322358e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10040
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Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.535155050660117e-5
allele num: 65140
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.122e0

MQRankSum
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DP
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SIO_000300: 1.329046e6

FS
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MQ
type: SiteQuality
SIO_000300: 5.849e1

InbreedingCoeff
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SIO_000300: -5.0e-4

ReadPosRankSum
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.51e-1

QD
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SIO_000300: 1.358e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.533507130808158e-5
allele num: 65210
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.330136e6

MQ
type: SiteQuality
SIO_000300: 5.674e1

BaseQRankSum
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SIO_000300: -4.11e-1

VQSLOD
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QD
type: SiteQuality
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MQRankSum
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SIO_000300: 4.11e-1

FS
type: SiteQuality
SIO_000300: 1.225e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.768853034023149e-5
allele num: 11404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16250
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65244
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: -2.018e0

MQ
type: SiteQuality
SIO_000300: 5.833e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.330543e6

QD
type: SiteQuality
SIO_000300: 1.423e1

MQRankSum
type: SiteQuality
SIO_000300: 2.15e0

FS
type: SiteQuality
SIO_000300: 2.174e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.85e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10086
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.059788262652224e-5
allele num: 65364
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.901e0

VQSLOD
type: SiteQuality
SIO_000300: -2.692e-1

BaseQRankSum
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SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.335652e6

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 7.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.46e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.528864970645792e-5
allele num: 65408
num of homozygotes: 0

Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

FS
type: SiteQuality
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DP
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MQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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African
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allele num: 10098
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Other
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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FS
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MQ
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ReadPosRankSum
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DP
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QD
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ClippingRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10098
num of homozygotes: 0

Other
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European (Finnish)
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Latino
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South Asian
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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MQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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FS
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VQSLOD
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MQ
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SIO_000300: 5.898e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.135722174499939e-5
allele num: 16298
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.903e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.86e-1

FS
type: SiteQuality
SIO_000300: 3.288e0

MQRankSum
type: SiteQuality
SIO_000300: 3.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.894e0

QD
type: SiteQuality
SIO_000300: 6.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.73e-1

DP
type: SiteQuality
SIO_000300: 1.337792e6

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528164063693878e-5
allele num: 65438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16276
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

InbreedingCoeff
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SIO_000300: 1.0e-4

QD
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -8.293e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 8.99e-1

MQ
type: SiteQuality
SIO_000300: 5.83e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.530293720044242e-4
allele num: 16274
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65454
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.3371e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.44e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.975e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

MQ
type: SiteQuality
SIO_000300: 5.822e1

BaseQRankSum
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SIO_000300: -3.178e0

FS
type: SiteQuality
SIO_000300: 5.21e-1

QD
type: SiteQuality
SIO_000300: 1.118e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16250
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65394
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.497e0

MQRankSum
type: SiteQuality
SIO_000300: 6.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 9.212e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.1e-1

DP
type: SiteQuality
SIO_000300: 1.333707e6

QD
type: SiteQuality
SIO_000300: 1.028e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.159911297277319e-5
allele num: 16234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.765e0

MQ
type: SiteQuality
SIO_000300: 5.799e1

FS
type: SiteQuality
SIO_000300: 3.671e0

DP
type: SiteQuality
SIO_000300: 1.329514e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.86e-1

QD
type: SiteQuality
SIO_000300: 1.086e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537657225451303e-5
allele num: 65034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16176
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.46e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.319659e6

VQSLOD
type: SiteQuality
SIO_000300: -7.166e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 1.252e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.41e-1

QD
type: SiteQuality
SIO_000300: 7.49e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 6
allele frequency: 6.004803843074459e-4
allele num: 9992
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65010
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.313e1

InbreedingCoeff
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MQ
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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MQRankSum
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SIO_000300: 3.07e-1

FS
type: SiteQuality
SIO_000300: 5.27e-1

VQSLOD
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SIO_000300: 1.2e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64744
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6504
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African
type: Population
allele count: 1
allele frequency: 1.009489198465576e-4
allele num: 9906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.55e-1

ReadPosRankSum
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BaseQRankSum
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FS
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MQ
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MQRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: -7.0e-4

DP
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QD
type: SiteQuality
SIO_000300: 6.91e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 46695
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4053
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 213
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.172058134083451e-4
allele num: 8532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16072
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.75e-1

DP
type: SiteQuality
SIO_000300: 1.307799e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.993e0

FS
type: SiteQuality
SIO_000300: 5.698e0

VQSLOD
type: SiteQuality
SIO_000300: -1.729e0

MQ
type: SiteQuality
SIO_000300: 5.869e1

QD
type: SiteQuality
SIO_000300: 8.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
all individuals: 3997
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1056
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3494
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 941
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45687
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9850
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.495632642874969e-4
allele num: 16028
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.925e1

MQRankSum
type: SiteQuality
SIO_000300: 3.42e-1