21-44153529-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44153529
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44153529
    reference: chr 21
allele count: 1
allele frequency: 8.365820603342981e-6
allele num: 119534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.471C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.307C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.347C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.224C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.258C>T
  hgvsp: ENST00000398234.3:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.169C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.180C>T
  hgvsp: ENST00000398224.3:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.311C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.428C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.81C>T
  hgvsp: ENST00000398227.3:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.303C>T
  hgvsp: ENST00000398236.3:c.303C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.466C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.483C>T
  hgvsp: ENST00000328862.6:c.483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.561C>T
  hgvsp: ENST00000291539.6:c.561C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.213C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.255C>T
  hgvsp: ENST00000335440.6:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.177C>T
  hgvsp: ENST00000349112.3:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.402C>T
  hgvsp: ENST00000380328.2:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.177C>T
  hgvsp: ENST00000539837.1:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.517C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg187Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

21-44153533-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44153533
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44153533
    reference: chr 21
allele count: 1
allele frequency: 8.387713677005921e-6
allele num: 119222
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.85G>C
  hgvsp: ENSP00000381283.3:p.Glu29Gln
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.181G>C
  hgvsp: ENSP00000441899.1:p.Glu61Gln
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.163G>C
  hgvsp: ENSP00000381285.3:p.Glu55Gln
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.442G>C
  hgvsp: ENSP00000381281.3:p.Glu148Gln
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.487G>C
  hgvsp: ENSP00000328699.6:p.Glu163Gln
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.385G>C
  hgvsp: ENSP00000335242.4:p.Glu129Gln
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.565G>C
  hgvsp: ENSP00000291539.6:p.Glu189Gln
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.228G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.475G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.364G>C
  hgvsp: ENSP00000381287.3:p.Glu122Gln
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.521G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.288G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.259G>C
  hgvsp: ENSP00000335365.6:p.Glu87Gln
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.184G>C
  hgvsp: ENSP00000381280.3:p.Glu62Gln
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.307G>C
  hgvsp: ENSP00000381291.3:p.Glu103Gln
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.217G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.173G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.181G>C
  hgvsp: ENSP00000344730.3:p.Glu61Gln
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.432G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.351G>C
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Glu189Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

21-44153543-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44153543
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44153543
    reference: chr 21
allele count: 1
allele frequency: 8.425451604205986e-6
allele num: 118688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.184+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.388+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.310+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.166+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.490+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.184+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.435+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.187+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.473+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.568+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.354+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.220+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.88+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.367+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.478+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.314+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.318+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.291+7G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.524+7G>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.568+7G>A
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

21-44153545-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44153545
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44153545
    reference: chr 21
allele count: 37
allele frequency: 3.121309262696136e-4
allele num: 118540
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.184+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.388+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.88+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.310+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.490+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.445+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.314+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.166+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.187+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.435+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.262+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.184+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.220+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.354+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.473+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.291+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.568+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.478+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.176+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.265+9C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.367+9C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

21-44153556-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44153556
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44153556
    reference: chr 21
allele count: 2
allele frequency: 1.69606512890095e-5
allele num: 117920
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.187+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.445+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.184+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.291+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.318+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.220+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.176+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.568+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.409+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.388+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.314+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.310+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.478+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.490+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.435+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.367+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.231+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.473+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.88+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.265+20C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.524+20C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

21-44153564-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44153564
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44153564
    reference: chr 21
allele count: 1
allele frequency: 8.526748409761421e-6
allele num: 117278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.187+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.490+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.367+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.176+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.435+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.291+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.310+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.184+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.354+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.265+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.262+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.314+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.524+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.88+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.388+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.231+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.568+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.478+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.166+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.445+28C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.318+28C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

21-44153570-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44153570
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44153570
    reference: chr 21
allele count: 1
allele frequency: 8.552271483305966e-6
allele num: 116928
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.367+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.231+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.176+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.184+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.478+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.291+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.314+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.318+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.262+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.435+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.445+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.568+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.388+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.187+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.166+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.265+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.524+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.88+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.220+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.490+34T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.409+34T>C
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/21-44153574-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44153574
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44153574
    reference: chr 21
allele count: 2
allele frequency: 1.718065458293961e-5
allele num: 116410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.524+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.187+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.490+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.478+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.568+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.265+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.354+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.367+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.473+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.176+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.314+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.310+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.409+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.166+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.388+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.435+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.318+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.184+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.184+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.445+38C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.262+38C>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/21-44153580-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44153580
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44153580
    reference: chr 21
allele count: 1
allele frequency: 8.624109560687859e-6
allele num: 115954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.490+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.388+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.473+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.409+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.354+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.265+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.262+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.88+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.314+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.367+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.220+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.318+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.176+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.445+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.184+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.524+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.478+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.166+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.291+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.187+44C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.435+44C>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

21-44163835-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163835
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163835
    reference: chr 21
allele count: 2
allele frequency: 7.734550235903782e-5
allele num: 25858
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.569-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.491-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.525-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.479-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.311-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7391C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7391C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.263-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.89-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7391C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.167-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.355-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7391C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.410-51C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ

21-44163836-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163836
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163836
    reference: chr 21
allele count: 0
allele frequency: 0.0e0
allele num: 25958
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.263-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7390T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.266-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7390T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.355-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.311-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.479-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.491-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.569-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.89-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.436-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-50T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7390T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.525-50T>C
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

21-44163837-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163837
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163837
    reference: chr 21
allele count: 0
allele frequency: 0.0e0
allele num: 25974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.263-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7389C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.479-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.410-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.569-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7389C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7389C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.89-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.232-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7389C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.266-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.525-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.311-49C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-49C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

21-44163838-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163838
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163838
    reference: chr 21
allele count: 1
allele frequency: 3.85000385000385e-5
allele num: 25974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.89-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.410-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.232-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7388C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.355-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.491-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.436-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.266-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.525-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.569-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7388C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.167-48C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.263-48C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

21-44163839-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163839
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163839
    reference: chr 21
allele count: 28199
allele frequency: 9.601293837248893e-1
allele num: 29370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7387A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.167-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7387A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.479-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.436-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.355-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.311-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.263-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.232-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.266-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7387A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.410-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.89-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.525-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-47A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7387A>G
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 13567
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP

21-44163845-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163845
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163845
    reference: chr 21
allele count: 81
allele frequency: 2.856336836166161e-3
allele num: 28358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.436-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7381G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.266-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.89-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.569-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.311-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7381G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.355-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.167-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7381G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.410-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.491-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.479-41G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-41G>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 3
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD

21-44163845-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163845
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163845
    reference: chr 21
allele count: 86
allele frequency: 3.032653924818393e-3
allele num: 28358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.232-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7381G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.266-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7381G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.355-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7381G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.525-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7381G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.436-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.479-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.311-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.491-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.410-41G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-41G>C
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

21-44163848-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163848
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163848
    reference: chr 21
allele count: 128
allele frequency: 4.50260306739834e-3
allele num: 28428
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.311-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7378C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7378C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.266-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.410-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.436-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.479-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.569-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.525-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.491-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.355-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7378C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.263-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-38C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7378C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 3
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

21-44163849-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163849
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163849
    reference: chr 21
allele count: 0
allele frequency: 0.0e0
allele num: 28574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7377G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.263-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.266-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.436-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.569-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.89-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.525-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7377G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.167-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.355-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7377G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7377G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.232-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.311-37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.410-37G>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/21-44163857-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163857
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163857
    reference: chr 21
allele count: 1
allele frequency: 3.412503412503413e-5
allele num: 29304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.569-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.263-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.479-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.410-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7369C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.89-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.311-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7369C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.232-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.266-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7369C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.525-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.436-29C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-29C>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

21-44163866-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163866
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163866
    reference: chr 21
allele count: 1
allele frequency: 3.345600535296086e-5
allele num: 29890
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.167-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.355-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.266-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.479-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.410-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.263-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.232-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.525-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.491-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7360G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.569-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.436-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.89-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7360G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-20G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.311-20G>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

21-44163866-GTC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163866
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163864
    reference: chr 21
allele count: 15
allele frequency: 5.018400802944129e-4
allele num: 29890
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7350_315-7349delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.525-10_525-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.167-10_167-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-10_292-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.491-10_491-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.569-10_569-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.89-10_89-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-10_368-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-10_474-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-10_188-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.479-10_479-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-10_389-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-10_185-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-10_446-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7350_319-7349delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.436-10_436-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-10_185-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.263-10_263-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7350_221-7349delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.232-10_232-9delCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7350_177-7349delCT
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: GTC
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

21-44163866-G-GTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163866
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163868
    reference: chr 21
allele count: 1
allele frequency: 3.345600535296086e-5
allele num: 29890
alternate allele: GTC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7350_221-7349dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-10_185-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.491-10_491-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.436-10_436-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.525-10_525-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7350_319-7349dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.311-10_311-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.89-10_89-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-10_368-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-10_185-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.410-10_410-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.167-10_167-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.263-10_263-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-10_474-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.355-10_355-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-10_446-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.569-10_569-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.232-10_232-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.266-10_266-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-10_292-9dupCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7350_315-7349dupCT
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

21-44163866-GTCTC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163866
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163862
    reference: chr 21
allele count: 2
allele frequency: 6.691201070592172e-5
allele num: 29890
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.525-12_525-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.355-12_355-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-12_185-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-12_368-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-12_185-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.232-12_232-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.89-12_89-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.266-12_266-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-12_446-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-12_292-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.263-12_263-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.436-12_436-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.479-12_479-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7352_319-7349delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7352_221-7349delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-12_389-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7352_177-7349delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.491-12_491-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-12_188-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.569-12_569-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-12_474-9delCTCT
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: GTCTC
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ

21-44163867-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163867
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163867
    reference: chr 21
allele count: 0
allele frequency: 0.0e0
allele num: 30240
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.525-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.410-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.232-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7359T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.569-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.266-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7359T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.311-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.167-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.491-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.355-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7359T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-19T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7359T>C
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

21-44163874-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163874
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163874
    reference: chr 21
allele count: 1
allele frequency: 3.031221582297666e-5
allele num: 32990
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7352C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7352C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.266-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.311-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.436-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.355-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.479-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7352C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7352C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.167-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.89-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.410-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.263-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-12C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-12C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

21-44163878-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163878
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163878
    reference: chr 21
allele count: 1
allele frequency: 2.958404828116679e-5
allele num: 33802
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.232-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.185-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.167-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.446-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7348G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.311-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.263-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.355-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.436-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.389-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.479-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.569-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7348G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.368-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.292-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.188-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.185-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.474-8G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.491-8G>C
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.569-8G>C
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

21-44163895-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163895
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163895
    reference: chr 21
allele count: 0
allele frequency: 0.0e0
allele num: 37376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.197T>C
  hgvsp: ENSP00000381280.3:p.Leu66Pro
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.98T>C
  hgvsp: ENSP00000381283.3:p.Leu33Pro
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.488T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.419T>C
  hgvsp: ENSP00000369685.2:p.Leu140Pro
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.398T>C
  hgvsp: ENSP00000335242.4:p.Leu133Pro
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.320T>C
  hgvsp: ENSP00000381291.3:p.Leu107Pro
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7331T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.500T>C
  hgvsp: ENSP00000328699.6:p.Leu167Pro
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.194T>C
  hgvsp: ENSP00000441899.1:p.Leu65Pro
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.455T>C
  hgvsp: ENSP00000381281.3:p.Leu152Pro
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.275T>C
  hgvsp: ENSP00000381289.3:p.Leu92Pro
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.578T>C
  hgvsp: ENSP00000291539.6:p.Leu193Pro
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.272T>C
  hgvsp: ENSP00000335365.6:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.377T>C
  hgvsp: ENSP00000381287.3:p.Leu126Pro
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.241T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.176T>C
  hgvsp: ENSP00000381285.3:p.Leu59Pro
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.301T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.364T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.483T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.445T>C
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Leu193Pro
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS

21-44163910-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163910
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163910
    reference: chr 21
allele count: 0
allele frequency: 0.0e0
allele num: 39236
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.191T>C
  hgvsp: ENSP00000381285.3:p.Ile64Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.515T>C
  hgvsp: ENSP00000328699.6:p.Ile172Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.209T>C
  hgvsp: ENSP00000441899.1:p.Ile70Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.460T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.209T>C
  hgvsp: ENSP00000344730.3:p.Ile70Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.290T>C
  hgvsp: ENSP00000381289.3:p.Ile97Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.498T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.549T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.287T>C
  hgvsp: ENSP00000335365.6:p.Ile96Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.392T>C
  hgvsp: ENSP00000381287.3:p.Ile131Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.335T>C
  hgvsp: ENSP00000381291.3:p.Ile112Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7316T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.212T>C
  hgvsp: ENSP00000381280.3:p.Ile71Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.434T>C
  hgvsp: ENSP00000369685.2:p.Ile145Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.113T>C
  hgvsp: ENSP00000381283.3:p.Ile38Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.413T>C
  hgvsp: ENSP00000335242.4:p.Ile138Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.503T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7316T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.316T>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7316T>C
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ile198Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

21-44163919-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163919
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163919
    reference: chr 21
allele count: 1
allele frequency: 2.571884162337328e-5
allele num: 38882
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.443G>A
  hgvsp: ENSP00000369685.2:p.Cys148Tyr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.524G>A
  hgvsp: ENSP00000328699.6:p.Cys175Tyr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.602G>A
  hgvsp: ENSP00000291539.6:p.Cys201Tyr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.122G>A
  hgvsp: ENSP00000381283.3:p.Cys41Tyr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.344G>A
  hgvsp: ENSP00000381291.3:p.Cys115Tyr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.218G>A
  hgvsp: ENSP00000344730.3:p.Cys73Tyr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.296G>A
  hgvsp: ENSP00000335365.6:p.Cys99Tyr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.388G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.221G>A
  hgvsp: ENSP00000381280.3:p.Cys74Tyr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.200G>A
  hgvsp: ENSP00000381285.3:p.Cys67Tyr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.479G>A
  hgvsp: ENSP00000381281.3:p.Cys160Tyr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.469G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.401G>A
  hgvsp: ENSP00000381287.3:p.Cys134Tyr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.422G>A
  hgvsp: ENSP00000335242.4:p.Cys141Tyr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.299G>A
  hgvsp: ENSP00000381289.3:p.Cys100Tyr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7307G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7307G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.265G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7307G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7307G>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Cys201Tyr
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ

21-44163923-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163923
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163923
    reference: chr 21
allele count: 2
allele frequency: 5.150922015040692e-5
allele num: 38828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.329G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.473G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.511G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.126G>A
  hgvsp: ENST00000398227.3:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.225G>A
  hgvsp: ENST00000398224.3:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.204G>A
  hgvsp: ENST00000398229.3:c.204G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.222G>A
  hgvsp: ENST00000349112.3:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.405G>A
  hgvsp: ENST00000398232.3:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.516G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.426G>A
  hgvsp: ENST00000335512.4:c.426G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7303G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.483G>A
  hgvsp: ENST00000398225.3:c.483G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.348G>A
  hgvsp: ENST00000398236.3:c.348G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.447G>A
  hgvsp: ENST00000380328.2:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.606G>A
  hgvsp: ENST00000291539.6:c.606G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.528G>A
  hgvsp: ENST00000328862.6:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.222G>A
  hgvsp: ENST00000539837.1:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.269G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7303G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.562G>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Lys202Lys
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP

21-44163934-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163934
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163933
    reference: chr 21
allele count: 1
allele frequency: 2.651254043162416e-5
allele num: 37718
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.234delG
  hgvsp: ENSP00000441899.1:p.Lys79ArgfsTer2
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.234delG
  hgvsp: ENSP00000344730.3:p.Lys79ArgfsTer2
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.237delG
  hgvsp: ENSP00000381280.3:p.Lys80ArgfsTer2
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.495delG
  hgvsp: ENSP00000381281.3:p.Lys166ArgfsTer2
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.438delG
  hgvsp: ENSP00000335242.4:p.Lys147ArgfsTer2
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.404delG
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7291delG
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7291delG
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.138delG
  hgvsp: ENSP00000381283.3:p.Lys47ArgfsTer2
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.315delG
  hgvsp: ENSP00000381289.3:p.Lys106ArgfsTer2
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.574delG
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.216delG
  hgvsp: ENSP00000381285.3:p.Lys73ArgfsTer2
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.523delG
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.312delG
  hgvsp: ENSP00000335365.6:p.Lys105ArgfsTer2
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.618delG
  hgvsp: ENSP00000291539.6:p.Lys207ArgfsTer2
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.459delG
  hgvsp: ENSP00000369685.2:p.Lys154ArgfsTer2
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.360delG
  hgvsp: ENSP00000381291.3:p.Lys121ArgfsTer2
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.540delG
  hgvsp: ENSP00000328699.6:p.Lys181ArgfsTer2
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7291delG
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.341delG
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Lys207ArgfsTer2
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: AG
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

21-44163935-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163935
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163935
    reference: chr 21
allele count: 259
allele frequency: 6.938491213030433e-3
allele num: 37328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7291G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.234G>A
  hgvsp: ENST00000349112.3:c.234G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.495G>A
  hgvsp: ENST00000398225.3:c.495G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7291G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.459G>A
  hgvsp: ENST00000380328.2:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.574G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7291G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.138G>A
  hgvsp: ENST00000398227.3:c.138G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.237G>A
  hgvsp: ENST00000398224.3:c.237G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.540G>A
  hgvsp: ENST00000328862.6:c.540G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.360G>A
  hgvsp: ENST00000398236.3:c.360G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.618G>A
  hgvsp: ENST00000291539.6:c.618G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.312G>A
  hgvsp: ENST00000335440.6:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.341G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.234G>A
  hgvsp: ENST00000539837.1:c.234G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.438G>A
  hgvsp: ENST00000335512.4:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.485G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.216G>A
  hgvsp: ENST00000398229.3:c.216G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7291G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.528G>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Lys206Lys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

21-44163944-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163944
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163944
    reference: chr 21
allele count: 12
allele frequency: 3.325205054311683e-4
allele num: 36088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.243G>A
  hgvsp: ENST00000539837.1:c.243G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.369G>A
  hgvsp: ENST00000398236.3:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.324G>A
  hgvsp: ENST00000398234.3:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.426G>A
  hgvsp: ENST00000398232.3:c.426G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.447G>A
  hgvsp: ENST00000335512.4:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.147G>A
  hgvsp: ENST00000398227.3:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.246G>A
  hgvsp: ENST00000398224.3:c.246G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.321G>A
  hgvsp: ENST00000335440.6:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7282G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.494G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.549G>A
  hgvsp: ENST00000328862.6:c.549G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.583G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7282G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.504G>A
  hgvsp: ENST00000398225.3:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.290G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.532G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7282G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.413G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.350G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.537G>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg209Arg
num of homozygotes: 1
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

21-44163957-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163957
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163957
    reference: chr 21
allele count: 2
allele frequency: 6.037189084762135e-5
allele num: 33128
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.640G>A
  hgvsp: ENSP00000291539.6:p.Ala214Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.507G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.256G>A
  hgvsp: ENSP00000344730.3:p.Ala86Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.334G>A
  hgvsp: ENSP00000335365.6:p.Ala112Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.382G>A
  hgvsp: ENSP00000381291.3:p.Ala128Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.460G>A
  hgvsp: ENSP00000335242.4:p.Ala154Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.517G>A
  hgvsp: ENSP00000381281.3:p.Ala173Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.545G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.337G>A
  hgvsp: ENSP00000381289.3:p.Ala113Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.481G>A
  hgvsp: ENSP00000369685.2:p.Ala161Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7269G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.562G>A
  hgvsp: ENSP00000328699.6:p.Ala188Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.160G>A
  hgvsp: ENSP00000381283.3:p.Ala54Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7269G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.256G>A
  hgvsp: ENSP00000441899.1:p.Ala86Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.238G>A
  hgvsp: ENSP00000381285.3:p.Ala80Thr
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.363G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.550G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.426G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.303G>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala214Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

21-44163981-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163981
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163981
    reference: chr 21
allele count: 1
allele frequency: 3.536067892503536e-5
allele num: 28280
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.251+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.439+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.520+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7245C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.609+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.558+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.350+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7245C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.494+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7245C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.347+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.272+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.173+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.269+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.269+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7245C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.653+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.530+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.563+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.395+11C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.316+11C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

21-44163982-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163982
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163982
    reference: chr 21
allele count: 1
allele frequency: 3.572194041580339e-5
allele num: 27994
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.520+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7244G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.563+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.350+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7244G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.575+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.530+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.609+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7244G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.376+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.452+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.653+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.269+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.473+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.173+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.272+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.439+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.316+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.347+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.494+12G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.395+12G>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/21-44163996-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163996
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163996
    reference: chr 21
allele count: 1
allele frequency: 4.297009281540048e-5
allele num: 23272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.376+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7230C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.609+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.251+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.395+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.269+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.272+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.350+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.575+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.173+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7230C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7230C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.316+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.530+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.520+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.473+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.269+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7230C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.439+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.563+26C>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.653+26C>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

21-44163996-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44163996
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44163996
    reference: chr 21
allele count: 0
allele frequency: 0.0e0
allele num: 23272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7230C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.316+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.272+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.563+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.473+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.575+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.452+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.494+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.269+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.350+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7230C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7230C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.347+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.609+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.520+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.653+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.558+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.530+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.269+26C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7230C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.173+26C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

21-44164000-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44164000
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44164000
    reference: chr 21
allele count: 1
allele frequency: 4.440497335701598e-5
allele num: 22520
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.558+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.452+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.563+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.439+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.269+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.520+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7226C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.395+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.251+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.609+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.376+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7226C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.269+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.272+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.473+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.350+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.347+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.653+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.530+30C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7226C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.575+30C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

21-44164001-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44164001
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44164001
    reference: chr 21
allele count: 0
allele frequency: 0.0e0
allele num: 22384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.452+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.269+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.520+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7225G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.269+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.473+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.609+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7225G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.376+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7225G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.395+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.530+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.575+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.653+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.272+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.350+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.251+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.347+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7225G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.173+31G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.563+31G>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP

21-44164007-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44164007
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44164007
    reference: chr 21
allele count: 2
allele frequency: 9.211495946941784e-5
allele num: 21712
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.350+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.272+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7219G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.347+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.575+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.439+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.563+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.520+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.609+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.269+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.316+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.473+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.173+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.251+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.530+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7219G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7219G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.653+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.269+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.376+37G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.452+37G>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

21-44164013-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44164013
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44164013
    reference: chr 21
allele count: 0
allele frequency: 0.0e0
allele num: 21288
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7213G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.575+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.494+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.269+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.173+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.395+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.439+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.520+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.350+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.316+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7213G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.473+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.558+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.272+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.347+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.609+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7213G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.530+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.269+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.251+43G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.653+43G>C
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

21-44164021-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44164021
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44164021
    reference: chr 21
allele count: 1
allele frequency: 4.785604900459418e-5
allele num: 20896
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7205G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.563+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.609+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.439+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.653+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.251+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7205G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.520+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.376+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7205G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.316+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.558+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.269+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.473+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.350+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.269+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7205G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.272+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.173+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.452+51G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.494+51G>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

21-44164021-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44164021
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44164021
    reference: chr 21
allele count: 0
allele frequency: 0.0e0
allele num: 20896
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.251+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.473+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.563+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.376+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.269+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-7205G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.272+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.653+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.347+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-7205G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.316+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.439+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.350+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-7205G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.269+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.395+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.530+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.173+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.575+51G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-7205G>C
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.558+51G>C
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

21-44171175-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44171175
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44171175
    reference: chr 21
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.377-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.610-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.564-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.576-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.270-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.252-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.440-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.351-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.174-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.348-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.270-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.495-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.654-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.531-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.453-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.396-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.474-51C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.559-51C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

21-44171176-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44171176
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44171176
    reference: chr 21
allele count: 2
allele frequency: 1.648478454386601e-5
allele num: 121324
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.474-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.317-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.396-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.273-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.351-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.576-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.252-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.270-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.440-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.270-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.564-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.521-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.453-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.610-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.654-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.531-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.559-50A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-50A>G
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

21-44171180-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44171180
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44171180
    reference: chr 21
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.576-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.351-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.610-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.654-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.521-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.270-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.396-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.564-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.559-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.474-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.495-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.377-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.348-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.273-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.270-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.453-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.531-46G>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.252-46G>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

21-44171202-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44171202
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44171202
    reference: chr 21
allele count: 2
allele frequency: 1.648206751054852e-5
allele num: 121344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.440-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.576-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.273-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.610-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.270-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.521-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.654-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.474-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.396-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.351-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.270-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.559-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.252-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.564-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.174-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.453-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.495-24C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.317-24C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

21-44171214-CCTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44171214
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44171211
    reference: chr 21
allele count: 2
allele frequency: 1.647636465490254e-5
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.377-9_377-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.396-9_396-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.252-9_252-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.270-9_270-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.270-9_270-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.453-9_453-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.474-9_474-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-9_315-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.440-9_440-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.610-9_610-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-9_319-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.654-9_654-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.348-9_348-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.351-9_351-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.564-9_564-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.317-9_317-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.273-9_273-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.495-9_495-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.521-9_521-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.174-9_174-7delTCT
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.177-9_177-7delTCT
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: CCTT
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

21-44171222-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44171222
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44171222
    reference: chr 21
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.654-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.440-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.270-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.531-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.273-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.495-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.521-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.351-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.610-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.474-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.270-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.252-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.315-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.564-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.221-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.348-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.319-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.576-4C>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.377-4C>G
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.654-4C>G
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

21-44171229-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44171229
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44171229
    reference: chr 21
allele count: 4
allele frequency: 3.294947198471145e-5
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.180C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.255C>T
  hgvsp: ENST00000398229.3:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.320C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.399C>T
  hgvsp: ENST00000398236.3:c.399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.579C>T
  hgvsp: ENST00000328862.6:c.579C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.657C>T
  hgvsp: ENST00000291539.6:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.273C>T
  hgvsp: ENST00000349112.3:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.322C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.273C>T
  hgvsp: ENST00000539837.1:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.276C>T
  hgvsp: ENST00000398224.3:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.354C>T
  hgvsp: ENST00000398234.3:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.177C>T
  hgvsp: ENST00000398227.3:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.534C>T
  hgvsp: ENST00000398225.3:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.498C>T
  hgvsp: ENST00000380328.2:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.477C>T
  hgvsp: ENST00000335512.4:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.524C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.613C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.224C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.318C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.351C>T
  hgvsp: ENST00000335440.6:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Thr219Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

21-44171238-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44171238
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44171238
    reference: chr 21
allele count: 9
allele frequency: 7.413142678286081e-5
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.186C>T
  hgvsp: ENST00000398227.3:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.666C>T
  hgvsp: ENST00000291539.6:c.666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.363C>T
  hgvsp: ENST00000398234.3:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.282C>T
  hgvsp: ENST00000539837.1:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.507C>T
  hgvsp: ENST00000380328.2:c.507C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.282C>T
  hgvsp: ENST00000349112.3:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.588C>T
  hgvsp: ENST00000328862.6:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.571C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.329C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.360C>T
  hgvsp: ENST00000335440.6:c.360C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.486C>T
  hgvsp: ENST00000335512.4:c.486C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.285C>T
  hgvsp: ENST00000398224.3:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.264C>T
  hgvsp: ENST00000398229.3:c.264C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.622C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.408C>T
  hgvsp: ENST00000398236.3:c.408C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.543C>T
  hgvsp: ENST00000398225.3:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.189C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.465C>T
  hgvsp: ENST00000398232.3:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.233C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.327C>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro222Pro
num of homozygotes: 1
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

21-44171247-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44171247
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44171247
    reference: chr 21
allele count: 7
allele frequency: 5.765777638666952e-5
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.675C>T
  hgvsp: ENST00000291539.6:c.675C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.340C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.195C>T
  hgvsp: ENST00000398227.3:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.372C>T
  hgvsp: ENST00000398234.3:c.372C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.542C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.631C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.294C>T
  hgvsp: ENST00000398224.3:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.585C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.461C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.398C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.516C>T
  hgvsp: ENST00000380328.2:c.516C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.474C>T
  hgvsp: ENST00000398232.3:c.474C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.338C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.597C>T
  hgvsp: ENST00000328862.6:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.242C>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.273C>T
  hgvsp: ENST00000398229.3:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.291C>T
  hgvsp: ENST00000539837.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.552C>T
  hgvsp: ENST00000398225.3:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.369C>T
  hgvsp: ENST00000335440.6:c.369C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.417C>T
  hgvsp: ENST00000398236.3:c.417C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Tyr225Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

21-44171249-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44171249
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44171249
    reference: chr 21
allele count: 4
allele frequency: 3.294730079238259e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.197G>A
  hgvsp: ENSP00000381283.3:p.Ser66Asn
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.633G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.371G>A
  hgvsp: ENSP00000335365.6:p.Ser124Asn
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.599G>A
  hgvsp: ENSP00000328699.6:p.Ser200Asn
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.419G>A
  hgvsp: ENSP00000381291.3:p.Ser140Asn
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.587G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.544G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.293G>A
  hgvsp: ENSP00000441899.1:p.Ser98Asn
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.400G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.338G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.342G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460989
  gene symbol: PDE9A
  hgvsc: ENST00000460989.1:n.200G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.497G>A
  hgvsp: ENSP00000335242.4:p.Ser166Asn
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.677G>A
  hgvsp: ENSP00000291539.6:p.Ser226Asn
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.374G>A
  hgvsp: ENSP00000381289.3:p.Ser125Asn
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.554G>A
  hgvsp: ENSP00000381281.3:p.Ser185Asn
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.244G>A
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.296G>A
  hgvsp: ENSP00000381280.3:p.Ser99Asn
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.275G>A
  hgvsp: ENSP00000381285.3:p.Ser92Asn
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.340G>A
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser226Asn
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

21-44171255-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44171255
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44171255
    reference: chr 21
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.605T>G
  hgvsp: ENSP00000328699.6:p.Leu202Trp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.593T>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.299T>G
  hgvsp: ENSP00000441899.1:p.Leu100Trp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.203T>G
  hgvsp: ENSP00000381283.3:p.Leu68Trp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.482T>G
  hgvsp: ENSP00000381287.3:p.Leu161Trp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.302T>G
  hgvsp: ENSP00000381280.3:p.Leu101Trp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.425T>G
  hgvsp: ENSP00000381291.3:p.Leu142Trp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.639T>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000462571
  gene symbol: PDE9A
  hgvsc: ENST00000462571.1:n.469T>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.250T>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.503T>G
  hgvsp: ENSP00000335242.4:p.Leu168Trp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.380T>G
  hgvsp: ENSP00000381289.3:p.Leu127Trp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.683T>G
  hgvsp: ENSP00000291539.6:p.Leu228Trp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.344T>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.377T>G
  hgvsp: ENSP00000335365.6:p.Leu126Trp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.406T>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.524T>G
  hgvsp: ENSP00000369685.2:p.Leu175Trp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.299T>G
  hgvsp: ENSP00000344730.3:p.Leu100Trp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.588T>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.348T>G
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Leu228Trp
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

21-44171260-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44171260
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44171260
    reference: chr 21
allele count: 7
allele frequency: 5.765587678115476e-5
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.565A>G
  hgvsp: ENSP00000381281.3:p.Asn189Asp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.382A>G
  hgvsp: ENSP00000335365.6:p.Asn128Asp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.430A>G
  hgvsp: ENSP00000381291.3:p.Asn144Asp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.487A>G
  hgvsp: ENSP00000381287.3:p.Asn163Asp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000470987
  gene symbol: PDE9A
  hgvsc: ENST00000470987.1:n.644A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.208A>G
  hgvsp: ENSP00000381283.3:p.Asn70Asp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.610A>G
  hgvsp: ENSP00000328699.6:p.Asn204Asp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.304A>G
  hgvsp: ENSP00000344730.3:p.Asn102Asp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.255A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.598A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.349A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495343
  gene symbol: PDE9A
  hgvsc: ENST00000495343.1:n.353A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.385A>G
  hgvsp: ENSP00000381289.3:p.Asn129Asp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.688A>G
  hgvsp: ENSP00000291539.6:p.Asn230Asp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.286A>G
  hgvsp: ENSP00000381285.3:p.Asn96Asp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000468805
  gene symbol: PDE9A
  hgvsc: ENST00000468805.1:n.411A>G
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.304A>G
  hgvsp: ENSP00000441899.1:p.Asn102Asp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.307A>G
  hgvsp: ENSP00000381280.3:p.Asn103Asp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.508A>G
  hgvsp: ENSP00000335242.4:p.Asn170Asp
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.529A>G
  hgvsp: ENSP00000369685.2:p.Asn177Asp
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Asn230Asp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

21-44171261-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44171261
    reference: chr 21
  end: Position
    type: ExactPosition
    position: 44171261
    reference: chr 21
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000328699
  ensembl transcript: ENST00000328862
  gene symbol: PDE9A
  hgvsc: ENST00000328862.6:c.611A>T
  hgvsp: ENSP00000328699.6:p.Asn204Ile
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335365
  ensembl transcript: ENST00000335440
  gene symbol: PDE9A
  hgvsc: ENST00000335440.6:c.383A>T
  hgvsp: ENSP00000335365.6:p.Asn128Ile
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000335242
  ensembl transcript: ENST00000335512
  gene symbol: PDE9A
  hgvsc: ENST00000335512.4:c.509A>T
  hgvsp: ENSP00000335242.4:p.Asn170Ile
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000369685
  ensembl transcript: ENST00000380328
  gene symbol: PDE9A
  hgvsc: ENST00000380328.2:c.530A>T
  hgvsp: ENSP00000369685.2:p.Asn177Ile
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000497805
  gene symbol: PDE9A
  hgvsc: ENST00000497805.1:n.599A>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000441899
  ensembl transcript: ENST00000539837
  gene symbol: PDE9A
  hgvsc: ENST00000539837.1:c.305A>T
  hgvsp: ENSP00000441899.1:p.Asn102Ile
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000495521
  gene symbol: PDE9A
  hgvsc: ENST00000495521.1:n.256A>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000490803
  gene symbol: PDE9A
  hgvsc: ENST00000490803.1:n.556A>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381289
  ensembl transcript: ENST00000398234
  gene symbol: PDE9A
  hgvsc: ENST00000398234.3:c.386A>T
  hgvsp: ENSP00000381289.3:p.Asn129Ile
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381291
  ensembl transcript: ENST00000398236
  gene symbol: PDE9A
  hgvsc: ENST00000398236.3:c.431A>T
  hgvsp: ENSP00000381291.3:p.Asn144Ile
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381280
  ensembl transcript: ENST00000398224
  gene symbol: PDE9A
  hgvsc: ENST00000398224.3:c.308A>T
  hgvsp: ENSP00000381280.3:p.Asn103Ile
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000291539
  ensembl transcript: ENST00000291539
  gene symbol: PDE9A
  hgvsc: ENST00000291539.6:c.689A>T
  hgvsp: ENSP00000291539.6:p.Asn230Ile
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467162
  gene symbol: PDE9A
  hgvsc: ENST00000467162.1:n.350A>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381283
  ensembl transcript: ENST00000398227
  gene symbol: PDE9A
  hgvsc: ENST00000398227.3:c.209A>T
  hgvsp: ENSP00000381283.3:p.Asn70Ile
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381281
  ensembl transcript: ENST00000398225
  gene symbol: PDE9A
  hgvsc: ENST00000398225.3:c.566A>T
  hgvsp: ENSP00000381281.3:p.Asn189Ile
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000344730
  ensembl transcript: ENST00000349112
  gene symbol: PDE9A
  hgvsc: ENST00000349112.3:c.305A>T
  hgvsp: ENSP00000344730.3:p.Asn102Ile
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381287
  ensembl transcript: ENST00000398232
  gene symbol: PDE9A
  hgvsc: ENST00000398232.3:c.488A>T
  hgvsp: ENSP00000381287.3:p.Asn163Ile
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160191
  ensembl protein: ENSP00000381285
  ensembl transcript: ENST00000398229
  gene symbol: PDE9A
  hgvsc: ENST00000398229.3:c.287A>T
  hgvsp: ENSP00000381285.3:p.Asn96Ile
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000460905
  gene symbol: PDE9A
  hgvsc: ENST00000460905.1:n.594A>T
  variant of: http://identifiers.org/hgnc/8795
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160191
  ensembl transcript: ENST00000467403
  gene symbol: PDE9A
  hgvsc: ENST00000467403.1:n.352A>T
  variant of: http://identifiers.org/hgnc/8795
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Asn230Ile
num of homozygotes: 0
population: Other
reference allele: A

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000468805
gene symbol: PDE9A
hgvsc: ENST00000468805.1:n.284C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381287
ensembl transcript: ENST00000398232
gene symbol: PDE9A
hgvsc: ENST00000398232.3:c.360C>T
hgvsp: ENST00000398232.3:c.360C>T(p.%3D)
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381285
ensembl transcript: ENST00000398229
gene symbol: PDE9A
hgvsc: ENST00000398229.3:c.159C>T
hgvsp: ENST00000398229.3:c.159C>T(p.%3D)
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335242
ensembl transcript: ENST00000335512
gene symbol: PDE9A
hgvsc: ENST00000335512.4:c.381C>T
hgvsp: ENST00000335512.4:c.381C>T(p.%3D)
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381281
ensembl transcript: ENST00000398225
gene symbol: PDE9A
hgvsc: ENST00000398225.3:c.438C>T
hgvsp: ENST00000398225.3:c.438C>T(p.%3D)
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 237
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 261
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 460
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35717
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1806
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 462
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 911
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 728
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10708
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 302
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3887
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1117
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1299
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1551
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 323
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38743
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1507
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1494
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4917
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6986
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2094
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16030
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65586
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.737942e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 5.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.201e1

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381289
ensembl transcript: ENST00000398234
gene symbol: PDE9A
hgvsc: ENST00000398234.3:c.262G>C
hgvsp: ENSP00000381289.3:p.Glu88Gln
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495343
gene symbol: PDE9A
hgvsc: ENST00000495343.1:n.315G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467162
gene symbol: PDE9A
hgvsc: ENST00000467162.1:n.311G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.470G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.406G>C
hgvsp: ENSP00000369685.2:p.Glu136Gln
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 462
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 727
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3886
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1053
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1115
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 34639
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 777
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 323
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 237
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1812
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 261
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10667
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1950
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 303
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1551
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1950
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4854
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1666
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6987
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 395
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37502
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2086
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15990
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529847321237341e-5
allele num: 65366
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.003e0

FS
type: SiteQuality
SIO_000300: 1.562e0

QD
type: SiteQuality
SIO_000300: 1.058e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.163e0

VQSLOD
type: SiteQuality
SIO_000300: 8.3e-1

DP
type: SiteQuality
SIO_000300: 1.728006e6

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.409+7G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.231+7G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381281
ensembl transcript: ENST00000398225
gene symbol: PDE9A
hgvsc: ENST00000398225.3:c.445+7G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.176+7G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335365
ensembl transcript: ENST00000335440
gene symbol: PDE9A
hgvsc: ENST00000335440.6:c.262+7G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381289
ensembl transcript: ENST00000398234
gene symbol: PDE9A
hgvsc: ENST00000398234.3:c.265+7G>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 10475
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 462
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3126
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 237
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 324
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 303
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 261
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1388
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1550
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1116
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 729
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1812
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3856
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1306
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 32805
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 176
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1254
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6988
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2064
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35192
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2655
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4768
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1482
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539788125153979e-5
allele num: 64944
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15954
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.70931e6

FS
type: SiteQuality
SIO_000300: 4.129e0

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.702e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.423e0

VQSLOD
type: SiteQuality
SIO_000300: -1.573e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.331e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 5.787e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.409+9C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.231+9C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495343
gene symbol: PDE9A
hgvsc: ENST00000495343.1:n.318+9C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000470987
gene symbol: PDE9A
hgvsc: ENST00000470987.1:n.524+9C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 10458
bin: 2.75e1
variant carriers: 5

GenotypeDepth
all individuals: 1358
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3876
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 307
bin: 6.75e1
variant carriers: 4

GenotypeDepth
all individuals: 1814
bin: 3.75e1
variant carriers: 2

GenotypeDepth
all individuals: 732
bin: 4.75e1
variant carriers: 4

GenotypeDepth
all individuals: 1592
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 32188
bin: 2.25e1
variant carriers: 5

GenotypeDepth
all individuals: 233
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 326
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 3453
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1131
bin: 4.25e1
variant carriers: 8

GenotypeDepth
all individuals: 1551
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 261
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 463
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 237
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1481
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7019
bin: 9.75e1
variant carriers: 36

GenotypeQuality
all individuals: 48
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34529
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2830
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4743
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2056
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.761183515322297e-4
allele num: 11356
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167133520074697e-4
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 32
allele frequency: 4.933703361085415e-4
allele num: 64860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.255020080321285e-4
allele num: 15936
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.93e-1

QD
type: SiteQuality
SIO_000300: 1.265e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

DP
type: SiteQuality
SIO_000300: 1.705807e6

VQSLOD
type: SiteQuality
SIO_000300: 5.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

MQRankSum
type: SiteQuality
SIO_000300: 2.77e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335365
ensembl transcript: ENST00000335440
gene symbol: PDE9A
hgvsc: ENST00000335440.6:c.262+20C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.354+20C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381285
ensembl transcript: ENST00000398229
gene symbol: PDE9A
hgvsc: ENST00000398229.3:c.166+20C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000344730
ensembl transcript: ENST00000349112
gene symbol: PDE9A
hgvsc: ENST00000349112.3:c.184+20C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 325
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 10340
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1622
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1811
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5738
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3127
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 239
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 303
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1119
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 729
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3870
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28218
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 176
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 464
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 261
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1549
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6990
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 79
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4589
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3867
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1575
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30608
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 925
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2507
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1729
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2047
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.298022420959819e-5
allele num: 15878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552843256001739e-5
allele num: 64398
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.117e0

VQSLOD
type: SiteQuality
SIO_000300: -1.876e0

MQRankSum
type: SiteQuality
SIO_000300: -3.18e-1

FS
type: SiteQuality
SIO_000300: 5.854e0

DP
type: SiteQuality
SIO_000300: 1.671745e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.115e0

QD
type: SiteQuality
SIO_000300: 1.554e1

MQ
type: SiteQuality
SIO_000300: 5.754e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.473+28C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495521
gene symbol: PDE9A
hgvsc: ENST00000495521.1:n.220+28C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000344730
ensembl transcript: ENST00000349112
gene symbol: PDE9A
hgvsc: ENST00000349112.3:c.184+28C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.409+28C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1805
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1817
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 261
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23288
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3802
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 303
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 239
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9346
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 730
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7713
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6890
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 129
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 324
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1120
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1549
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 465
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3318
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4227
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3963
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4499
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6989
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 692
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1480
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23708
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.880994671403197e-5
allele num: 11260
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.869999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.007e-1

DP
type: SiteQuality
SIO_000300: 1.62661e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.289e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.28e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e0

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381291
ensembl transcript: ENST00000398236
gene symbol: PDE9A
hgvsc: ENST00000398236.3:c.310+34T>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.354+34T>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.473+34T>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000441899
ensembl transcript: ENST00000539837
gene symbol: PDE9A
hgvsc: ENST00000539837.1:c.184+34T>C
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 303
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 261
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8481
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 728
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 146
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 21830
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3680
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7999
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1812
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1935
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 324
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 464
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 239
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8911
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1118
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1549
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1579
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3830
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1675
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6987
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1477
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4340
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4647
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2389
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22617
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1608
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4207
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2040
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.686168151879117e-5
allele num: 10324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15772
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.014e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 1.323e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.97e-1

DP
type: SiteQuality
SIO_000300: 1.611412e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

FS
type: SiteQuality
SIO_000300: 2.564e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495521
gene symbol: PDE9A
hgvsc: ENST00000495521.1:n.220+38C>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381283
ensembl transcript: ENST00000398227
gene symbol: PDE9A
hgvsc: ENST00000398227.3:c.88+38C>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000468805
gene symbol: PDE9A
hgvsc: ENST00000468805.1:n.291+38C>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.231+38C>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 176
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19761
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 155
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 732
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1820
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 261
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 240
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 303
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 325
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1130
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8525
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 465
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 314
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8061
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3711
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10635
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2106
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 231
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1549
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4484
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2525
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4608
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4098
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19287
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2098
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2029
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6988
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4656
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1597
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2629
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.947745168217609e-5
allele num: 11176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.578731331502005e-5
allele num: 63342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.145e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.86e-1

FS
type: SiteQuality
SIO_000300: 3.409e0

VQSLOD
type: SiteQuality
SIO_000300: -3.11e-1

DP
type: SiteQuality
SIO_000300: 1.598293e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.407e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.69e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.231+44C>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381291
ensembl transcript: ENST00000398236
gene symbol: PDE9A
hgvsc: ENST00000398236.3:c.310+44C>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: true
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000291539
ensembl transcript: ENST00000291539
gene symbol: PDE9A
hgvsc: ENST00000291539.6:c.568+44C>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000344730
ensembl transcript: ENST00000349112
gene symbol: PDE9A
hgvsc: ENST00000349112.3:c.184+44C>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 1127
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2339
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 11358
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1549
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8003
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 303
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1808
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 467
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 261
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8018
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19474
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3619
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 731
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 231
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 325
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 240
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2426
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4484
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1484
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4779
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2587
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4826
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6989
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2036
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17123
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3607
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4023
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.58654608916389e-5
allele num: 63030
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.788e0

MQ
type: SiteQuality
SIO_000300: 5.872e1

VQSLOD
type: SiteQuality
SIO_000300: -6.099e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

QD
type: SiteQuality
SIO_000300: 1.08e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.09e-1

DP
type: SiteQuality
SIO_000300: 1.588228e6

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381289
ensembl transcript: ENST00000398234
gene symbol: PDE9A
hgvsc: ENST00000398234.3:c.266-51C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.474-51C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.232-51C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000490803
gene symbol: PDE9A
hgvsc: ENST00000490803.1:n.436-51C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 233
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 220
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4241
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20727
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 163
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 205
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2419
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 23548
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 299
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 200
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 151
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1464
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 732
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 247
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1576
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 213
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1711
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1952
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1231
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3754
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 437
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15090
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6846
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1569
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12324
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8288
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 934
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 1.893939393939394e-3
allele num: 1056
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12398
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.781e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.11e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 1.549e1

DP
type: SiteQuality
SIO_000300: 7.32066e5

VQSLOD
type: SiteQuality
SIO_000300: 2.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381285
ensembl transcript: ENST00000398229
gene symbol: PDE9A
hgvsc: ENST00000398229.3:c.167-50T>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495343
gene symbol: PDE9A
hgvsc: ENST00000495343.1:n.319-7390T>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.232-50T>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.410-50T>C
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 205
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 213
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 163
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20628
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 1464
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2363
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 151
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4264
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23543
bin: 7.5e0
variant carriers: 2

GenotypeDepth
all individuals: 220
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1607
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 247
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 301
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 200
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 750
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11880
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8288
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7327
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1722
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1226
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1206
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15279
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 585
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3752
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 161
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3140
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1056
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 938
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12468
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

DP
type: SiteQuality
SIO_000300: 7.33705e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.385e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.04e-2

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000490803
gene symbol: PDE9A
hgvsc: ENST00000490803.1:n.436-49C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381285
ensembl transcript: ENST00000398229
gene symbol: PDE9A
hgvsc: ENST00000398229.3:c.167-49C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000328699
ensembl transcript: ENST00000328862
gene symbol: PDE9A
hgvsc: ENST00000328862.6:c.491-49C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.355-49C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 200
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20603
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 772
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 247
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2308
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4294
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 151
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 205
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1645
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23539
bin: 7.5e0
variant carriers: 2

GenotypeDepth
all individuals: 176
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 220
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 213
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1464
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 153
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 163
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1227
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1722
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8156
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15554
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11032
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 464
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8241
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3752
bin: 9.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1050
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3140
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 938
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.656e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.831e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.877e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.95e-2

DP
type: SiteQuality
SIO_000300: 7.35736e5

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-2

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381291
ensembl transcript: ENST00000398236
gene symbol: PDE9A
hgvsc: ENST00000398236.3:c.311-48C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000497805
gene symbol: PDE9A
hgvsc: ENST00000497805.1:n.479-48C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495521
gene symbol: PDE9A
hgvsc: ENST00000495521.1:n.221-7388C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495343
gene symbol: PDE9A
hgvsc: ENST00000495343.1:n.319-7388C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 213
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 247
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1707
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 151
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 307
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 163
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 153
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1464
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23556
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 220
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2230
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 802
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4320
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 200
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20526
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 205
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8166
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10152
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1214
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9066
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1724
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1951
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15893
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3754
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 71
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1052
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.988496564946476e-5
allele num: 12518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 946
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.38386e5

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

QD
type: SiteQuality
SIO_000300: 1.418e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.07e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.32e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000328699
ensembl transcript: ENST00000328862
gene symbol: PDE9A
hgvsc: ENST00000328862.6:c.491-47A>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: true
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000291539
ensembl transcript: ENST00000291539
gene symbol: PDE9A
hgvsc: ENST00000291539.6:c.569-47A>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000441899
ensembl transcript: ENST00000539837
gene symbol: PDE9A
hgvsc: ENST00000539837.1:c.185-47A>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000344730
ensembl transcript: ENST00000349112
gene symbol: PDE9A
hgvsc: ENST00000349112.3:c.185-47A>G
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 156
bin: 5.25e1
variant carriers: 156

GenotypeDepth
all individuals: 982
bin: 2.75e1
variant carriers: 980

GenotypeDepth
all individuals: 13620
bin: 2.5e0
variant carriers: 13094

GenotypeDepth
all individuals: 223
bin: 7.25e1
variant carriers: 222

GenotypeDepth
all individuals: 197
bin: 6.25e1
variant carriers: 197

GenotypeDepth
all individuals: 205
bin: 8.25e1
variant carriers: 205

GenotypeDepth
all individuals: 5216
bin: 1.25e1
variant carriers: 5191

GenotypeDepth
all individuals: 169
bin: 5.75e1
variant carriers: 169

GenotypeDepth
all individuals: 167
bin: 9.25e1
variant carriers: 166

GenotypeDepth
all individuals: 2466
bin: 1.75e1
variant carriers: 2451

GenotypeDepth
all individuals: 206
bin: 3.75e1
variant carriers: 206

GenotypeDepth
all individuals: 377
bin: 3.25e1
variant carriers: 375

GenotypeDepth
all individuals: 25356
bin: 7.5e0
variant carriers: 24991

GenotypeDepth
all individuals: 1776
bin: 2.25e1
variant carriers: 1764

GenotypeDepth
all individuals: 222
bin: 7.75e1
variant carriers: 221

GenotypeDepth
all individuals: 151
bin: 4.75e1
variant carriers: 150

GenotypeDepth
all individuals: 152
bin: 4.25e1
variant carriers: 152

GenotypeDepth
all individuals: 184
bin: 8.75e1
variant carriers: 183

GenotypeDepth
all individuals: 1704
bin: 9.75e1
variant carriers: 1703

GenotypeDepth
all individuals: 189
bin: 6.75e1
variant carriers: 189

GenotypeQuality
all individuals: 877
bin: 5.25e1
variant carriers: 874

GenotypeQuality
all individuals: 629
bin: 6.75e1
variant carriers: 629

GenotypeQuality
all individuals: 761
bin: 2.5e0
variant carriers: 47

GenotypeQuality
all individuals: 796
bin: 6.25e1
variant carriers: 783

GenotypeQuality
all individuals: 522
bin: 4.25e1
variant carriers: 518

GenotypeQuality
all individuals: 371
bin: 8.25e1
variant carriers: 371

GenotypeQuality
all individuals: 940
bin: 4.75e1
variant carriers: 935

GenotypeQuality
all individuals: 8727
bin: 2.25e1
variant carriers: 8710

GenotypeQuality
all individuals: 1454
bin: 3.75e1
variant carriers: 1446

GenotypeQuality
all individuals: 2980
bin: 3.25e1
variant carriers: 2969

GenotypeQuality
all individuals: 13033
bin: 1.75e1
variant carriers: 13016

GenotypeQuality
all individuals: 6224
bin: 7.5e0
variant carriers: 6100

GenotypeQuality
all individuals: 6937
bin: 1.25e1
variant carriers: 6911

GenotypeQuality
all individuals: 206
bin: 8.75e1
variant carriers: 206

GenotypeQuality
all individuals: 289
bin: 7.25e1
variant carriers: 288

GenotypeQuality
all individuals: 495
bin: 7.75e1
variant carriers: 495

GenotypeQuality
all individuals: 501
bin: 5.75e1
variant carriers: 501

GenotypeQuality
all individuals: 226
bin: 9.25e1
variant carriers: 226

GenotypeQuality
all individuals: 5063
bin: 9.75e1
variant carriers: 5057

GenotypeQuality
all individuals: 2687
bin: 2.75e1
variant carriers: 2683

East Asian
type: Population
allele count: 1192
allele frequency: 9.46031746031746e-1
allele num: 1260
num of homozygotes: 564

Other
type: Population
allele count: 252
allele frequency: 9.767441860465116e-1
allele num: 258
num of homozygotes: 123

Latino
type: Population
allele count: 1209
allele frequency: 9.861337683523654e-1
allele num: 1226
num of homozygotes: 596

African
type: Population
allele count: 3326
allele frequency: 9.946172248803827e-1
allele num: 3344
num of homozygotes: 1654

South Asian
type: Population
allele count: 7165
allele frequency: 8.989962358845671e-1
allele num: 7970
num of homozygotes: 3229

European (Non-Finnish)
type: Population
allele count: 14415
allele frequency: 9.830196399345336e-1
allele num: 14664
num of homozygotes: 7085

European (Finnish)
type: Population
allele count: 640
allele frequency: 9.876543209876543e-1
allele num: 648
num of homozygotes: 316

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

QD
type: SiteQuality
SIO_000300: 3.223e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.849e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.76e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.93997e5

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000470987
gene symbol: PDE9A
hgvsc: ENST00000470987.1:n.525-41G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.232-41G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335365
ensembl transcript: ENST00000335440
gene symbol: PDE9A
hgvsc: ENST00000335440.6:c.263-41G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.177-7381G>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 1434
bin: 2.75e1
variant carriers: 6

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 131
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 452
bin: 3.75e1
variant carriers: 5

GenotypeDepth
all individuals: 127
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4565
bin: 1.25e1
variant carriers: 31

GenotypeDepth
all individuals: 18886
bin: 2.5e0
variant carriers: 41

GenotypeDepth
all individuals: 170
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1725
bin: 1.75e1
variant carriers: 8

GenotypeDepth
all individuals: 627
bin: 9.75e1
variant carriers: 12

GenotypeDepth
all individuals: 306
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2500
bin: 2.25e1
variant carriers: 5

GenotypeDepth
all individuals: 25802
bin: 7.5e0
variant carriers: 105

GenotypeDepth
all individuals: 186
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 237
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 371
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 198
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 771
bin: 3.25e1
variant carriers: 2

GenotypeDepth
all individuals: 112
bin: 9.25e1
variant carriers: 3

GenotypeDepth
all individuals: 163
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 173
bin: 9.25e1
variant carriers: 10

GenotypeQuality
all individuals: 633
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 268
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 14802
bin: 7.5e0
variant carriers: 14

GenotypeQuality
all individuals: 468
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 327
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 780
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 15907
bin: 2.25e1
variant carriers: 12

GenotypeQuality
all individuals: 6808
bin: 1.25e1
variant carriers: 23

GenotypeQuality
all individuals: 1040
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1684
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2952
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1650
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6949
bin: 1.75e1
variant carriers: 31

GenotypeQuality
all individuals: 417
bin: 7.75e1
variant carriers: 6

GenotypeQuality
all individuals: 995
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 134
bin: 8.75e1
variant carriers: 8

GenotypeQuality
all individuals: 301
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 2644
bin: 9.75e1
variant carriers: 88

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13934
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 6.116207951070336e-4
allele num: 3270
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 1.375e-3
allele num: 8000
num of homozygotes: 0

East Asian
type: Population
allele count: 68
allele frequency: 5.448717948717949e-2
allele num: 1248
num of homozygotes: 3

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.73e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.68e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 6.72118e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.592e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381285
ensembl transcript: ENST00000398229
gene symbol: PDE9A
hgvsc: ENST00000398229.3:c.167-41G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335365
ensembl transcript: ENST00000335440
gene symbol: PDE9A
hgvsc: ENST00000335440.6:c.263-41G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: true
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000291539
ensembl transcript: ENST00000291539
gene symbol: PDE9A
hgvsc: ENST00000291539.6:c.569-41G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381283
ensembl transcript: ENST00000398227
gene symbol: PDE9A
hgvsc: ENST00000398227.3:c.89-41G>C
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 1434
bin: 2.75e1
variant carriers: 2

GenotypeDepth
all individuals: 2500
bin: 2.25e1
variant carriers: 4

GenotypeDepth
all individuals: 131
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 18886
bin: 2.5e0
variant carriers: 26

GenotypeDepth
all individuals: 25802
bin: 7.5e0
variant carriers: 55

GenotypeDepth
all individuals: 163
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 771
bin: 3.25e1
variant carriers: 4

GenotypeDepth
all individuals: 1725
bin: 1.75e1
variant carriers: 12

GenotypeDepth
all individuals: 4565
bin: 1.25e1
variant carriers: 18

GenotypeDepth
all individuals: 237
bin: 5.25e1
variant carriers: 2

GenotypeDepth
all individuals: 112
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 3

GenotypeDepth
all individuals: 627
bin: 9.75e1
variant carriers: 18

GenotypeDepth
all individuals: 186
bin: 6.75e1
variant carriers: 4

GenotypeDepth
all individuals: 452
bin: 3.75e1
variant carriers: 3

GenotypeDepth
all individuals: 371
bin: 4.25e1
variant carriers: 3

GenotypeDepth
all individuals: 170
bin: 7.25e1
variant carriers: 2

GenotypeDepth
all individuals: 127
bin: 8.75e1
variant carriers: 7

GenotypeDepth
all individuals: 306
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 198
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 633
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14802
bin: 7.5e0
variant carriers: 7

GenotypeQuality
all individuals: 995
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2952
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 15907
bin: 2.25e1
variant carriers: 7

GenotypeQuality
all individuals: 417
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 780
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 6949
bin: 1.75e1
variant carriers: 18

GenotypeQuality
all individuals: 301
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 268
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 173
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1650
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1684
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6808
bin: 1.25e1
variant carriers: 12

GenotypeQuality
all individuals: 468
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 8.75e1
variant carriers: 6

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2644
bin: 9.75e1
variant carriers: 90

African
type: Population
allele count: 83
allele frequency: 2.53822629969419e-2
allele num: 3270
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8000
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13934
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.664298401420959e-3
allele num: 1126
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.592e1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.73e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

DP
type: SiteQuality
SIO_000300: 6.72118e5

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.232-38C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000468805
gene symbol: PDE9A
hgvsc: ENST00000468805.1:n.292-38C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381285
ensembl transcript: ENST00000398229
gene symbol: PDE9A
hgvsc: ENST00000398229.3:c.167-38C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381283
ensembl transcript: ENST00000398227
gene symbol: PDE9A
hgvsc: ENST00000398227.3:c.89-38C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 376
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2797
bin: 2.25e1
variant carriers: 31

GenotypeDepth
all individuals: 605
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4592
bin: 1.25e1
variant carriers: 17

GenotypeDepth
all individuals: 1346
bin: 1.75e1
variant carriers: 22

GenotypeDepth
all individuals: 308
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 197
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26488
bin: 7.5e0
variant carriers: 51

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18511
bin: 2.5e0
variant carriers: 13

GenotypeDepth
all individuals: 814
bin: 3.25e1
variant carriers: 18

GenotypeDepth
all individuals: 173
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 185
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1572
bin: 2.75e1
variant carriers: 27

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 463
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 7

GenotypeQuality
all individuals: 18492
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 965
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5443
bin: 1.75e1
variant carriers: 10

GenotypeQuality
all individuals: 14855
bin: 7.5e0
variant carriers: 6

GenotypeQuality
all individuals: 206
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 410
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 3339
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6152
bin: 1.25e1
variant carriers: 7

GenotypeQuality
all individuals: 406
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2640
bin: 9.75e1
variant carriers: 138

GenotypeQuality
all individuals: 999
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 311
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 267
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1640
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 122
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 8.103727714748784e-4
allele num: 1234
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.756567425569177e-4
allele num: 1142
num of homozygotes: 0

South Asian
type: Population
allele count: 126
allele frequency: 1.57224856501123e-2
allele num: 8014
num of homozygotes: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13988
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.80726e5

VQSLOD
type: SiteQuality
SIO_000300: 4.58e0

QD
type: SiteQuality
SIO_000300: 1.567e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.71e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000328699
ensembl transcript: ENST00000328862
gene symbol: PDE9A
hgvsc: ENST00000328862.6:c.491-37G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000497805
gene symbol: PDE9A
hgvsc: ENST00000497805.1:n.479-37G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.474-37G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000344730
ensembl transcript: ENST00000349112
gene symbol: PDE9A
hgvsc: ENST00000349112.3:c.185-37G>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1158
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 18190
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 197
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 604
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4577
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26944
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 823
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2993
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1621
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 308
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 462
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1650
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5729
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 966
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14864
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20173
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 679
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1642
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4447
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3691
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14056
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1252
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8042
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1164
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.38e1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 6.86648e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.516e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.456e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.83e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.177-7369C>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000328699
ensembl transcript: ENST00000328862
gene symbol: PDE9A
hgvsc: ENST00000328862.6:c.491-29C>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.355-29C>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381285
ensembl transcript: ENST00000398229
gene symbol: PDE9A
hgvsc: ENST00000398229.3:c.167-29C>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 29526
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 198
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 465
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1811
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 379
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15640
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 308
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3652
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4573
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 677
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 604
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 899
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1682
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13556
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1551
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4366
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24992
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3893
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1102
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2989
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.718213058419244e-3
allele num: 582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1222
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8106
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.032e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.57e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.931999999999999e-1

DP
type: SiteQuality
SIO_000300: 7.14645e5

QD
type: SiteQuality
SIO_000300: 7.14e0

MQRankSum
type: SiteQuality
SIO_000300: -3.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381280
ensembl transcript: ENST00000398224
gene symbol: PDE9A
hgvsc: ENST00000398224.3:c.188-20G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.177-7360G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495521
gene symbol: PDE9A
hgvsc: ENST00000495521.1:n.221-7360G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335242
ensembl transcript: ENST00000335512
gene symbol: PDE9A
hgvsc: ENST00000335512.4:c.389-20G>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 2134
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11945
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 242
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1110
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 799
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 200
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32057
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 427
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4061
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 167
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4811
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 234
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 321
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 532
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 604
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2010
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10908
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29022
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1550
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4886
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1278
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.920560747663551e-4
allele num: 3424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8046
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.29e-2

FS
type: SiteQuality
SIO_000300: 5.676e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

QD
type: SiteQuality
SIO_000300: 3.56e0

VQSLOD
type: SiteQuality
SIO_000300: 1.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

DP
type: SiteQuality
SIO_000300: 7.58998e5

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381289
ensembl transcript: ENST00000398234
gene symbol: PDE9A
hgvsc: ENST00000398234.3:c.266-10_266-9delCT
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.410-10_410-9delCT
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381291
ensembl transcript: ENST00000398236
gene symbol: PDE9A
hgvsc: ENST00000398236.3:c.311-10_311-9delCT
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.355-10_355-9delCT
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 234
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4061
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 242
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 604
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 167
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11945
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4811
bin: 1.25e1
variant carriers: 2

GenotypeDepth
all individuals: 32057
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 427
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 799
bin: 1.75e1
variant carriers: 4

GenotypeDepth
all individuals: 1110
bin: 3.25e1
variant carriers: 7

GenotypeDepth
all individuals: 532
bin: 3.75e1
variant carriers: 12

GenotypeDepth
all individuals: 321
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2134
bin: 2.75e1
variant carriers: 6

GenotypeDepth
all individuals: 200
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2010
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 181
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4886
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1117
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29022
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 437
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10908
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 2511
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 219
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1550
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 609
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1947
bin: 1.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2400
bin: 1.25e1
variant carriers: 6

GenotypeQuality
all individuals: 276
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.25e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3424
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 8.699975142928163e-4
allele num: 8046
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 4.045307443365696e-4
allele num: 14832
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.564945226917058e-3
allele num: 1278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.29e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.95e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 5.676e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

DP
type: SiteQuality
SIO_000300: 7.58998e5

VQSLOD
type: SiteQuality
SIO_000300: 1.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-2

QD
type: SiteQuality
SIO_000300: 3.56e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000497805
gene symbol: PDE9A
hgvsc: ENST00000497805.1:n.479-10_479-9dupCT
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.177-7350_177-7349dupCT
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381280
ensembl transcript: ENST00000398224
gene symbol: PDE9A
hgvsc: ENST00000398224.3:c.188-10_188-9dupCT
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335242
ensembl transcript: ENST00000335512
gene symbol: PDE9A
hgvsc: ENST00000335512.4:c.389-10_389-9dupCT
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 799
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 242
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 200
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 321
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4811
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 32057
bin: 7.5e0
variant carriers: 4

GenotypeDepth
all individuals: 11945
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 532
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 167
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 427
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 604
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1110
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2134
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4061
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4886
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2010
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29022
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10908
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1550
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 276
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3424
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 6.993006993006993e-4
allele num: 1430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8046
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.676e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.95e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.29e-2

QD
type: SiteQuality
SIO_000300: 3.56e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.44e-1

DP
type: SiteQuality
SIO_000300: 7.58998e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-2

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.410-12_410-9delCTCT
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381285
ensembl transcript: ENST00000398229
gene symbol: PDE9A
hgvsc: ENST00000398229.3:c.167-12_167-9delCTCT
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381291
ensembl transcript: ENST00000398236
gene symbol: PDE9A
hgvsc: ENST00000398236.3:c.311-12_311-9delCTCT
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467162
gene symbol: PDE9A
hgvsc: ENST00000467162.1:n.315-7352_315-7349delCTCT
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 234
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4811
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 799
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4061
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 427
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 242
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 167
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32057
bin: 7.5e0
variant carriers: 2

GenotypeDepth
all individuals: 1110
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2134
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 532
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11945
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 200
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 321
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 604
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 609
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2010
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10908
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4886
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29022
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1550
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8046
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 5.841121495327102e-4
allele num: 3424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14832
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

DP
type: SiteQuality
SIO_000300: 7.58998e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.29e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

FS
type: SiteQuality
SIO_000300: 5.676e0

QD
type: SiteQuality
SIO_000300: 3.56e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335365
ensembl transcript: ENST00000335440
gene symbol: PDE9A
hgvsc: ENST00000335440.6:c.263-19T>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000490803
gene symbol: PDE9A
hgvsc: ENST00000490803.1:n.436-19T>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000497805
gene symbol: PDE9A
hgvsc: ENST00000497805.1:n.479-19T>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381283
ensembl transcript: ENST00000398227
gene symbol: PDE9A
hgvsc: ENST00000398227.3:c.89-19T>C
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 4760
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 418
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32339
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 790
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 237
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 197
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 604
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4128
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2169
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11643
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1070
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 522
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2215
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4971
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2326
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29171
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1574
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1134
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10725
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 586
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 9.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15042
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8082
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1460
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

QD
type: SiteQuality
SIO_000300: 1.4e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.03e-1

FS
type: SiteQuality
SIO_000300: 5.269e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.57e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 7.58646e5

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000470987
gene symbol: PDE9A
hgvsc: ENST00000470987.1:n.525-12C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000328699
ensembl transcript: ENST00000328862
gene symbol: PDE9A
hgvsc: ENST00000328862.6:c.491-12C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: true
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000291539
ensembl transcript: ENST00000291539
gene symbol: PDE9A
hgvsc: ENST00000291539.6:c.569-12C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.232-12C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 183
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2390
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 34161
bin: 7.5e0
variant carriers: 2

GenotypeDepth
all individuals: 4784
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 514
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 604
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 625
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9618
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4436
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 390
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2510
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6077
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32517
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 160
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1452
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 185
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8898
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1659
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.189909566872918e-4
allele num: 8404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.78e-2

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

FS
type: SiteQuality
SIO_000300: 4.287e0

VQSLOD
type: SiteQuality
SIO_000300: 8.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.516e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.077e1

DP
type: SiteQuality
SIO_000300: 7.80048e5

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381289
ensembl transcript: ENST00000398234
gene symbol: PDE9A
hgvsc: ENST00000398234.3:c.266-8G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495521
gene symbol: PDE9A
hgvsc: ENST00000495521.1:n.221-7348G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381283
ensembl transcript: ENST00000398227
gene symbol: PDE9A
hgvsc: ENST00000398227.3:c.89-8G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467162
gene symbol: PDE9A
hgvsc: ENST00000467162.1:n.315-7348G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000470987
gene symbol: PDE9A
hgvsc: ENST00000470987.1:n.525-8G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.410-8G>C
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 112
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5251
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8529
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 391
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 604
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 34834
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4360
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2455
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 509
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 608
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1117
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6530
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2510
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1372
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33400
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7975
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1370
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1322
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1874
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.181753722524226e-4
allele num: 8462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.67e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.808e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.496e-1

QD
type: SiteQuality
SIO_000300: 1.57e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-1

DP
type: SiteQuality
SIO_000300: 7.92941e5

MQ
type: SiteQuality
SIO_000300: 5.923e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000470987
gene symbol: PDE9A
hgvsc: ENST00000470987.1:n.534T>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000344730
ensembl transcript: ENST00000349112
gene symbol: PDE9A
hgvsc: ENST00000349112.3:c.194T>C
hgvsp: ENSP00000344730.3:p.Leu65Pro
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467162
gene symbol: PDE9A
hgvsc: ENST00000467162.1:n.315-7331T>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495343
gene symbol: PDE9A
hgvsc: ENST00000495343.1:n.319-7331T>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.177-7331T>C
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 390
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35767
bin: 7.5e0
variant carriers: 2

GenotypeDepth
all individuals: 6670
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2630
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 506
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5955
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1146
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 604
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4441
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 630
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1375
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 150
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2508
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35493
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8004
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 890
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5860
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1592
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2022
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.32e-2

QD
type: SiteQuality
SIO_000300: 1.208e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.48e0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

DP
type: SiteQuality
SIO_000300: 8.30552e5

FS
type: SiteQuality
SIO_000300: 0.0e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495521
gene symbol: PDE9A
hgvsc: ENST00000495521.1:n.221-7316T>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381281
ensembl transcript: ENST00000398225
gene symbol: PDE9A
hgvsc: ENST00000398225.3:c.470T>C
hgvsp: ENSP00000381281.3:p.Ile157Thr
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.256T>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: true
consequence: missense_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000291539
ensembl transcript: ENST00000291539
gene symbol: PDE9A
hgvsc: ENST00000291539.6:c.593T>C
hgvsp: ENSP00000291539.6:p.Ile198Thr
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.379T>C
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 35191
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 2716
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 604
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5601
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6858
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5075
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 505
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1149
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 389
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 646
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1095
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2508
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35697
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 171
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5639
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8239
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1653
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1375
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 960
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2206
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.41094e5

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.27e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000497805
gene symbol: PDE9A
hgvsc: ENST00000497805.1:n.512G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000468805
gene symbol: PDE9A
hgvsc: ENST00000468805.1:n.325G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000470987
gene symbol: PDE9A
hgvsc: ENST00000470987.1:n.558G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.507G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000441899
ensembl transcript: ENST00000539837
gene symbol: PDE9A
hgvsc: ENST00000539837.1:c.218G>A
hgvsp: ENSP00000441899.1:p.Cys73Tyr
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 183
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 390
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6098
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 674
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6284
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1145
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5551
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 507
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 34723
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2755
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 604
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1987
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35325
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1367
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6195
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7644
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2178
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3970
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 4.325259515570934e-4
allele num: 2312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 320
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.09e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.246e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.38e-2

QD
type: SiteQuality
SIO_000300: 1.56e0

VQSLOD
type: SiteQuality
SIO_000300: -2.867e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 8.34758e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.177-7303G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335365
ensembl transcript: ENST00000335440
gene symbol: PDE9A
hgvsc: ENST00000335440.6:c.300G>A
hgvsp: ENST00000335440.6:c.300G>A(p.%3D)
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381289
ensembl transcript: ENST00000398234
gene symbol: PDE9A
hgvsc: ENST00000398234.3:c.303G>A
hgvsp: ENST00000398234.3:c.303G>A(p.%3D)
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.392G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495343
gene symbol: PDE9A
hgvsc: ENST00000495343.1:n.319-7303G>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 2729
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 34474
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6420
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5688
bin: 1.25e1
variant carriers: 2

GenotypeDepth
all individuals: 628
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1148
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 506
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 390
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 604
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6128
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7672
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6532
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1367
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 825
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1565
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 175
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1074
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35675
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3956
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 9.208103130755065e-4
allele num: 2172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 946
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.78e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.283e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.44e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.31009e5

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467162
gene symbol: PDE9A
hgvsc: ENST00000467162.1:n.315-7291delG
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000490803
gene symbol: PDE9A
hgvsc: ENST00000490803.1:n.485delG
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.281delG
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000497805
gene symbol: PDE9A
hgvsc: ENST00000497805.1:n.528delG
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: frameshift_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381287
ensembl transcript: ENST00000398232
gene symbol: PDE9A
hgvsc: ENST00000398232.3:c.417delG
hgvsp: ENSP00000381287.3:p.Lys140ArgfsTer2
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 33306
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2663
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5035
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8175
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 604
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 604
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1144
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6222
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 506
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 313
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 390
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1048
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 991
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8280
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34768
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6654
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1788
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.101520253035404e-5
allele num: 19602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2236
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.73e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.637e0

MQ
type: SiteQuality
SIO_000300: 6.265e1

QD
type: SiteQuality
SIO_000300: 3.07e0

DP
type: SiteQuality
SIO_000300: 8.07461e5

FS
type: SiteQuality
SIO_000300: 2.616e0

MQRankSum
type: SiteQuality
SIO_000300: 2.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.64e0

VQSLOD
type: SiteQuality
SIO_000300: -2.745e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.932e0

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381289
ensembl transcript: ENST00000398234
gene symbol: PDE9A
hgvsc: ENST00000398234.3:c.315G>A
hgvsp: ENST00000398234.3:c.315G>A(p.%3D)
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381287
ensembl transcript: ENST00000398232
gene symbol: PDE9A
hgvsc: ENST00000398232.3:c.417G>A
hgvsp: ENST00000398232.3:c.417G>A(p.%3D)
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.523G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.281G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.404G>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 237
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 506
bin: 3.75e1
variant carriers: 2

GenotypeDepth
all individuals: 32714
bin: 7.5e0
variant carriers: 72

GenotypeDepth
all individuals: 8757
bin: 2.5e0
variant carriers: 3

GenotypeDepth
all individuals: 2649
bin: 2.75e1
variant carriers: 5

GenotypeDepth
all individuals: 181
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4766
bin: 2.25e1
variant carriers: 16

GenotypeDepth
all individuals: 391
bin: 4.25e1
variant carriers: 2

GenotypeDepth
all individuals: 164
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 689
bin: 1.75e1
variant carriers: 77

GenotypeDepth
all individuals: 1143
bin: 3.25e1
variant carriers: 2

GenotypeDepth
all individuals: 616
bin: 9.75e1
variant carriers: 26

GenotypeDepth
all individuals: 6391
bin: 1.25e1
variant carriers: 114

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 112
bin: 9.25e1
variant carriers: 2

GenotypeDepth
all individuals: 197
bin: 6.25e1
variant carriers: 2

GenotypeDepth
all individuals: 123
bin: 8.75e1
variant carriers: 3

GenotypeDepth
all individuals: 316
bin: 4.75e1
variant carriers: 3

GenotypeDepth
all individuals: 171
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 429
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1091
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8840
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 397
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1344
bin: 6.75e1
variant carriers: 11

GenotypeQuality
all individuals: 97
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 33319
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 298
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 136
bin: 5.25e1
variant carriers: 6

GenotypeQuality
all individuals: 2726
bin: 9.75e1
variant carriers: 247

GenotypeQuality
all individuals: 1035
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 688
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 151
bin: 5.75e1
variant carriers: 8

GenotypeQuality
all individuals: 137
bin: 8.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2466
bin: 1.75e1
variant carriers: 5

GenotypeQuality
all individuals: 316
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 175
bin: 9.25e1
variant carriers: 10

GenotypeQuality
all individuals: 6273
bin: 6.25e1
variant carriers: 7

GenotypeQuality
all individuals: 488
bin: 7.75e1
variant carriers: 8

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 2.475247524752475e-3
allele num: 808
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 6.852444038373687e-4
allele num: 8756
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 5.494505494505495e-3
allele num: 2184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 233
allele frequency: 1.200288481351741e-2
allele num: 19412
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 1.307531380753138e-3
allele num: 3824
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 3.333333333333334e-3
allele num: 300
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.001e0

MQRankSum
type: SiteQuality
SIO_000300: 4.05e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.05e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.01e0

QD
type: SiteQuality
SIO_000300: 1.166e1

DP
type: SiteQuality
SIO_000300: 8.04855e5

Annotation
canonical: true
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000291539
ensembl transcript: ENST00000291539
gene symbol: PDE9A
hgvsc: ENST00000291539.6:c.627G>A
hgvsp: ENST00000291539.6:c.627G>A(p.%3D)
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000344730
ensembl transcript: ENST00000349112
gene symbol: PDE9A
hgvsc: ENST00000349112.3:c.243G>A
hgvsp: ENST00000349112.3:c.243G>A(p.%3D)
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.468G>A
hgvsp: ENST00000380328.2:c.468G>A(p.%3D)
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495521
gene symbol: PDE9A
hgvsc: ENST00000495521.1:n.221-7282G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381285
ensembl transcript: ENST00000398229
gene symbol: PDE9A
hgvsc: ENST00000398229.3:c.225G>A
hgvsp: ENST00000398229.3:c.225G>A(p.%3D)
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 2614
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10811
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 121
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4160
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 584
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 170
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 505
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31197
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 1146
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6510
bin: 1.25e1
variant carriers: 4

GenotypeDepth
all individuals: 131
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 396
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 198
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 596
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 316
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10928
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 672
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 429
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5775
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31741
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2632
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1323
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2506
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 8.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1938
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2078
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18618
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 1.383125864453665e-3
allele num: 8676
num of homozygotes: 1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

FS
type: SiteQuality
SIO_000300: 2.454e0

QD
type: SiteQuality
SIO_000300: 1.145e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.11e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

DP
type: SiteQuality
SIO_000300: 7.80132e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000470987
gene symbol: PDE9A
hgvsc: ENST00000470987.1:n.596G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381280
ensembl transcript: ENST00000398224
gene symbol: PDE9A
hgvsc: ENST00000398224.3:c.259G>A
hgvsp: ENSP00000381280.3:p.Ala87Thr
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381287
ensembl transcript: ENST00000398232
gene symbol: PDE9A
hgvsc: ENST00000398232.3:c.439G>A
hgvsp: ENSP00000381287.3:p.Ala147Thr
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495521
gene symbol: PDE9A
hgvsc: ENST00000495521.1:n.221-7269G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.177-7269G>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 2570
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 197
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3594
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1146
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 406
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5922
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27738
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 15398
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 316
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 595
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 506
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 394
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 121
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15583
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3300
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5286
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1312
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26430
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1714
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16790
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.359603586597452e-4
allele num: 8476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.119e0

QD
type: SiteQuality
SIO_000300: 9.369999999999999e0

FS
type: SiteQuality
SIO_000300: 6.334e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.03e-2

DP
type: SiteQuality
SIO_000300: 7.41366e5

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381287
ensembl transcript: ENST00000398232
gene symbol: PDE9A
hgvsc: ENST00000398232.3:c.452+11C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000328699
ensembl transcript: ENST00000328862
gene symbol: PDE9A
hgvsc: ENST00000328862.6:c.575+11C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335242
ensembl transcript: ENST00000335512
gene symbol: PDE9A
hgvsc: ENST00000335512.4:c.473+11C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000468805
gene symbol: PDE9A
hgvsc: ENST00000468805.1:n.376+11C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 316
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4066
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 24562
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 197
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3111
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20148
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2474
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 595
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 502
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 121
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 400
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1155
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 296
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1810
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17530
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 289
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1319
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25171
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4739
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2496
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2343
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1266
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.121098626716604e-4
allele num: 3204
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13732
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.85e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

DP
type: SiteQuality
SIO_000300: 6.72384e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.67e-2

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000441899
ensembl transcript: ENST00000539837
gene symbol: PDE9A
hgvsc: ENST00000539837.1:c.269+12G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381285
ensembl transcript: ENST00000398229
gene symbol: PDE9A
hgvsc: ENST00000398229.3:c.251+12G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495343
gene symbol: PDE9A
hgvsc: ENST00000495343.1:n.319-7244G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.558+12G>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 293
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25181
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3950
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19609
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2474
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 393
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1146
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 197
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 502
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 316
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3076
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 121
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 595
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2496
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4728
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25787
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2461
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16847
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1772
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.206563706563707e-4
allele num: 8288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1136
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.75e-2

QD
type: SiteQuality
SIO_000300: 7.91e0

FS
type: SiteQuality
SIO_000300: 6.227e0

VQSLOD
type: SiteQuality
SIO_000300: -1.127e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 6.67266e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.494+26C>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335365
ensembl transcript: ENST00000335440
gene symbol: PDE9A
hgvsc: ENST00000335440.6:c.347+26C>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381287
ensembl transcript: ENST00000398232
gene symbol: PDE9A
hgvsc: ENST00000398232.3:c.452+26C>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.558+26C>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 14613
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 2027
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 191
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 693
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 464
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31031
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 121
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2272
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2543
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 595
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 349
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1041
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4071
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8748
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2223
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2495
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29656
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3827
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1047
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2492
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.182033096926714e-3
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7998
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.54e-2

QD
type: SiteQuality
SIO_000300: 5.14e0

MQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.907e-1

DP
type: SiteQuality
SIO_000300: 6.00752e5

FS
type: SiteQuality
SIO_000300: 3.559e0

MQ
type: SiteQuality
SIO_000300: 5.728e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000468805
gene symbol: PDE9A
hgvsc: ENST00000468805.1:n.376+26C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.439+26C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381285
ensembl transcript: ENST00000398229
gene symbol: PDE9A
hgvsc: ENST00000398229.3:c.251+26C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381291
ensembl transcript: ENST00000398236
gene symbol: PDE9A
hgvsc: ENST00000398236.3:c.395+26C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 121
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 349
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1041
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 191
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 693
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2272
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14613
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 31031
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 295
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 595
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2543
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2027
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 464
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8748
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2495
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2492
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3827
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4071
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29656
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 135
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2223
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 371
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7998
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2866
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 5.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.728e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.907e-1

FS
type: SiteQuality
SIO_000300: 3.559e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.54e-2

DP
type: SiteQuality
SIO_000300: 6.00752e5

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.316+30C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.494+30C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.177-7226C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381283
ensembl transcript: ENST00000398227
gene symbol: PDE9A
hgvsc: ENST00000398227.3:c.173+30C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 223
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2198
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 961
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 121
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13801
bin: 7.5e0
variant carriers: 2

GenotypeDepth
all individuals: 439
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2465
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 595
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 287
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 333
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31867
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 224
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1782
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 843
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7681
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29899
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2493
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2222
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3582
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2836
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4333
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 9.950248756218905e-5
allele num: 10050
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7954
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.96e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

QD
type: SiteQuality
SIO_000300: 1.137e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.72e0

DP
type: SiteQuality
SIO_000300: 5.87027e5

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.439+31G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.558+31G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.316+31G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.494+31G>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 944
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1734
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 222
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 595
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13661
bin: 7.5e0
variant carriers: 2

GenotypeDepth
all individuals: 121
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2438
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 286
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32026
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 331
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2167
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 894
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 431
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 224
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3537
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29900
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1002
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4384
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2970
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7469
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2201
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7964
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9968
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.99e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 1.534e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

DP
type: SiteQuality
SIO_000300: 5.83935e5

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.558+37G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.494+37G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495343
gene symbol: PDE9A
hgvsc: ENST00000495343.1:n.319-7219G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381291
ensembl transcript: ENST00000398236
gene symbol: PDE9A
hgvsc: ENST00000398236.3:c.395+37G>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 308
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2245
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 220
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2011
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 867
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 121
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1218
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 222
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1529
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13174
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 32363
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 278
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 595
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29439
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3527
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6172
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2495
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4891
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3177
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 409
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 7.326007326007326e-4
allele num: 2730
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.981e1

MQRankSum
type: SiteQuality
SIO_000300: 1.56e0

VQSLOD
type: SiteQuality
SIO_000300: -8.924e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.11e-2

QD
type: SiteQuality
SIO_000300: 1.62e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

FS
type: SiteQuality
SIO_000300: 3.509e0

DP
type: SiteQuality
SIO_000300: 5.68321e5

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495343
gene symbol: PDE9A
hgvsc: ENST00000495343.1:n.319-7213G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381287
ensembl transcript: ENST00000398232
gene symbol: PDE9A
hgvsc: ENST00000398232.3:c.452+43G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000497805
gene symbol: PDE9A
hgvsc: ENST00000497805.1:n.563+43G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000468805
gene symbol: PDE9A
hgvsc: ENST00000468805.1:n.376+43G>C
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 189
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1519
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 788
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 395
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 593
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32237
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 219
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 276
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 298
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13103
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 2260
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1744
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1350
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 122
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 222
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4714
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4857
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27883
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3271
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 266
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2536
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5397
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.476e1

DP
type: SiteQuality
SIO_000300: 5.56328e5

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.25e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335365
ensembl transcript: ENST00000335440
gene symbol: PDE9A
hgvsc: ENST00000335440.6:c.347+51G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000328699
ensembl transcript: ENST00000328862
gene symbol: PDE9A
hgvsc: ENST00000328862.6:c.575+51G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381291
ensembl transcript: ENST00000398236
gene symbol: PDE9A
hgvsc: ENST00000398236.3:c.395+51G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381281
ensembl transcript: ENST00000398225
gene symbol: PDE9A
hgvsc: ENST00000398225.3:c.530+51G>A
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 373
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 122
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 214
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 592
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1290
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1667
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2426
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13077
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 286
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 221
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1487
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 728
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32234
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7276
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3106
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4722
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2490
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1710
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25323
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5562
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 319
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9106
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.515151515151515e-3
allele num: 660
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7784
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.946e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e-1

FS
type: SiteQuality
SIO_000300: 6.584e0

DP
type: SiteQuality
SIO_000300: 5.53565e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.25e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e-1

QD
type: SiteQuality
SIO_000300: 1.479e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381287
ensembl transcript: ENST00000398232
gene symbol: PDE9A
hgvsc: ENST00000398232.3:c.452+51G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.494+51G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000470987
gene symbol: PDE9A
hgvsc: ENST00000470987.1:n.609+51G>C
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000490803
gene symbol: PDE9A
hgvsc: ENST00000490803.1:n.520+51G>C
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 122
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 221
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32234
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 728
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1290
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2426
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 286
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1487
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 373
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13077
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 170
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 592
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 214
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1667
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25323
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1710
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5562
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4722
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7276
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3106
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 269
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2490
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 591
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9106
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.946e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 6.584e0

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

QD
type: SiteQuality
SIO_000300: 1.479e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.25e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.53565e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.317-51C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495343
gene symbol: PDE9A
hgvsc: ENST00000495343.1:n.319-51C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381280
ensembl transcript: ENST00000398224
gene symbol: PDE9A
hgvsc: ENST00000398224.3:c.273-51C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000490803
gene symbol: PDE9A
hgvsc: ENST00000490803.1:n.521-51C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 728
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1137
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3867
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1776
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 915
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1771
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 220
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2334
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2866
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1412
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1169
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3401
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1023
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1836
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4099
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25110
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2817
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51388
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3458
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1435
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66680
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

FS
type: SiteQuality
SIO_000300: 8.9e-1

DP
type: SiteQuality
SIO_000300: 5.173955e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

QD
type: SiteQuality
SIO_000300: 1.428e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.198e0

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335365
ensembl transcript: ENST00000335440
gene symbol: PDE9A
hgvsc: ENST00000335440.6:c.348-50A>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381283
ensembl transcript: ENST00000398227
gene symbol: PDE9A
hgvsc: ENST00000398227.3:c.174-50A>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000468805
gene symbol: PDE9A
hgvsc: ENST00000468805.1:n.377-50A>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.495-50A>G
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 4195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1768
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1169
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 702
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1776
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 221
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1133
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1412
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3401
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4099
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1023
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2871
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3867
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2334
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2817
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 915
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1863
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25110
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 81
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3509
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51388
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.173829e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.72e0

VQSLOD
type: SiteQuality
SIO_000300: -1.334e0

FS
type: SiteQuality
SIO_000300: 3.356e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

QD
type: SiteQuality
SIO_000300: 1.318e1

MQ
type: SiteQuality
SIO_000300: 5.985e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.01e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495343
gene symbol: PDE9A
hgvsc: ENST00000495343.1:n.319-46G>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.440-46G>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381283
ensembl transcript: ENST00000398227
gene symbol: PDE9A
hgvsc: ENST00000398227.3:c.174-46G>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.317-46G>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 586
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1951
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1763
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 218
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2910
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3867
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1023
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25110
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1412
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1169
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3401
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2334
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 915
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2817
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1776
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1131
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4099
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3840
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51387
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 215
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1458
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.171e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 2.03e0

VQSLOD
type: SiteQuality
SIO_000300: -3.689e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

DP
type: SiteQuality
SIO_000300: 5.174221e6

MQRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.55e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.177-24C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000468805
gene symbol: PDE9A
hgvsc: ENST00000468805.1:n.377-24C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381281
ensembl transcript: ENST00000398225
gene symbol: PDE9A
hgvsc: ENST00000398225.3:c.531-24C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335365
ensembl transcript: ENST00000335440
gene symbol: PDE9A
hgvsc: ENST00000335440.6:c.348-24C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4099
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1776
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3228
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 102
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2334
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1123
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1861
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 920
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2131
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1025
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1412
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1170
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25110
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 2817
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3867
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3401
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51385
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 351
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1472
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4541
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.977e0

FS
type: SiteQuality
SIO_000300: 4.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.07e-1

DP
type: SiteQuality
SIO_000300: 5.18031e6

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

MQRankSum
type: SiteQuality
SIO_000300: 8.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

QD
type: SiteQuality
SIO_000300: 1.351e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.559-9_559-7delTCT
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000328699
ensembl transcript: ENST00000328862
gene symbol: PDE9A
hgvsc: ENST00000328862.6:c.576-9_576-7delTCT
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381281
ensembl transcript: ENST00000398225
gene symbol: PDE9A
hgvsc: ENST00000398225.3:c.531-9_531-7delTCT
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495521
gene symbol: PDE9A
hgvsc: ENST00000495521.1:n.221-9_221-7delTCT
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 1170
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1871
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2817
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 917
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3867
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3401
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3326
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1024
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1776
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1412
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2206
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1123
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25110
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 4195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4099
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2334
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51385
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 20
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1493
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4851
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e0

FS
type: SiteQuality
SIO_000300: 2.488e0

MQRankSum
type: SiteQuality
SIO_000300: -1.097e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.822e1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.38e-1

QD
type: SiteQuality
SIO_000300: 1.824e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.57e-1

DP
type: SiteQuality
SIO_000300: 5.182204e6

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381287
ensembl transcript: ENST00000398232
gene symbol: PDE9A
hgvsc: ENST00000398232.3:c.453-4C>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.177-4C>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.559-4C>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381283
ensembl transcript: ENST00000398227
gene symbol: PDE9A
hgvsc: ENST00000398227.3:c.174-4C>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381291
ensembl transcript: ENST00000398236
gene symbol: PDE9A
hgvsc: ENST00000398236.3:c.396-4C>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.317-4C>G
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1879
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1024
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1170
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 918
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1124
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3401
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1776
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2817
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3344
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2203
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1412
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2334
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 25109
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4100
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3867
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1495
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4882
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51386
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 786
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.18207e6

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.68e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.097e-1

QD
type: SiteQuality
SIO_000300: 1.522e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.66e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.443C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000497805
gene symbol: PDE9A
hgvsc: ENST00000497805.1:n.567C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.562C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381287
ensembl transcript: ENST00000398232
gene symbol: PDE9A
hgvsc: ENST00000398232.3:c.456C>T
hgvsp: ENST00000398232.3:c.456C>T(p.%3D)
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000468805
gene symbol: PDE9A
hgvsc: ENST00000468805.1:n.380C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 1024
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4100
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2334
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2215
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1879
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25109
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 917
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2817
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3351
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1776
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3401
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3867
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1171
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1412
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51386
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 640
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4910
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1499
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422774076317383e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.951e-1

QD
type: SiteQuality
SIO_000300: 1.141e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.09e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.182547e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.91e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.12e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000497805
gene symbol: PDE9A
hgvsc: ENST00000497805.1:n.576C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.452C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495343
gene symbol: PDE9A
hgvsc: ENST00000495343.1:n.331C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000468805
gene symbol: PDE9A
hgvsc: ENST00000468805.1:n.389C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000490803
gene symbol: PDE9A
hgvsc: ENST00000490803.1:n.533C>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 3354
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25108
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 4100
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2218
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3868
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 916
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1877
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1025
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1170
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2817
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1412
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1776
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2335
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1126
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3401
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4922
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51388
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 639
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.450581395348837e-4
allele num: 16512
num of homozygotes: 1

VQSLOD
type: SiteQuality
SIO_000300: 2.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.914e-1

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.47e1

DP
type: SiteQuality
SIO_000300: 5.182691e6

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.198C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467162
gene symbol: PDE9A
hgvsc: ENST00000467162.1:n.336C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000335242
ensembl transcript: ENST00000335512
gene symbol: PDE9A
hgvsc: ENST00000335512.4:c.495C>T
hgvsp: ENST00000335512.4:c.495C>T(p.%3D)
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.580C>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000344730
ensembl transcript: ENST00000349112
gene symbol: PDE9A
hgvsc: ENST00000349112.3:c.291C>T
hgvsp: ENST00000349112.3:c.291C>T(p.%3D)
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 1412
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1170
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3402
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2818
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1775
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3353
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2335
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 25105
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1127
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4101
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1025
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2224
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1876
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3867
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 916
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4929
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51386
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 784
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.726888333653661e-4
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

QD
type: SiteQuality
SIO_000300: 1.219e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQRankSum
type: SiteQuality
SIO_000300: -5.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 5.182076e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.449e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.579e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.463G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.582G>A
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000369685
ensembl transcript: ENST00000380328
gene symbol: PDE9A
hgvsc: ENST00000380328.2:c.518G>A
hgvsp: ENSP00000369685.2:p.Ser173Asn
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000344730
ensembl transcript: ENST00000349112
gene symbol: PDE9A
hgvsc: ENST00000349112.3:c.293G>A
hgvsp: ENSP00000344730.3:p.Ser98Asn
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381287
ensembl transcript: ENST00000398232
gene symbol: PDE9A
hgvsc: ENST00000398232.3:c.476G>A
hgvsp: ENSP00000381287.3:p.Ser159Asn
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3353
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1775
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2221
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25101
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2817
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1025
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1875
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3404
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1130
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2335
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1170
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 917
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1412
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4102
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 620
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4926
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51386
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.181205e6

MQ
type: SiteQuality
SIO_000300: 5.943e1

VQSLOD
type: SiteQuality
SIO_000300: 6.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.582e0

FS
type: SiteQuality
SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: 7.72e-1

QD
type: SiteQuality
SIO_000300: 1.257e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-2

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381285
ensembl transcript: ENST00000398229
gene symbol: PDE9A
hgvsc: ENST00000398229.3:c.281T>G
hgvsp: ENSP00000381285.3:p.Leu94Trp
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000160191
ensembl protein: ENSP00000381281
ensembl transcript: ENST00000398225
gene symbol: PDE9A
hgvsc: ENST00000398225.3:c.560T>G
hgvsp: ENSP00000381281.3:p.Leu187Trp
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000490803
gene symbol: PDE9A
hgvsc: ENST00000490803.1:n.550T>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.206T>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.346T>G
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1126
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1877
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4101
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1025
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3404
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1775
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1412
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1170
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2222
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 917
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3868
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3356
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25101
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2336
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2817
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4933
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1499
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51383
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 640
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.180873e6

FS
type: SiteQuality
SIO_000300: 8.18e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -8.818e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.17e0

QD
type: SiteQuality
SIO_000300: 8.300000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.41e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000467403
gene symbol: PDE9A
hgvsc: ENST00000467403.1:n.351A>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000490803
gene symbol: PDE9A
hgvsc: ENST00000490803.1:n.555A>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.474A>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.211A>G
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460905
gene symbol: PDE9A
hgvsc: ENST00000460905.1:n.593A>G
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 3404
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 917
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2817
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2222
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1776
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2336
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3358
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1412
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1875
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1126
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3868
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1170
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4101
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25100
bin: 9.75e1
variant carriers: 6

GenotypeDepth
all individuals: 1025
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4935
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51383
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 349
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.04887770086008e-4
allele num: 66738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.18162e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.952e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.76e0

QD
type: SiteQuality
SIO_000300: 1.356e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.6e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000470987
gene symbol: PDE9A
hgvsc: ENST00000470987.1:n.645A>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000495343
gene symbol: PDE9A
hgvsc: ENST00000495343.1:n.354A>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000468805
gene symbol: PDE9A
hgvsc: ENST00000468805.1:n.412A>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000462571
gene symbol: PDE9A
hgvsc: ENST00000462571.1:n.475A>T
variant of: http://identifiers.org/hgnc/8795

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000160191
ensembl transcript: ENST00000460989
gene symbol: PDE9A
hgvsc: ENST00000460989.1:n.212A>T
variant of: http://identifiers.org/hgnc/8795

GenotypeDepth
all individuals: 1025
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2224
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3404
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1412
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1170
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1875
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3356
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 917
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2336
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1775
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1126
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2818
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4101
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25099
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4937
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51383
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 494
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0