X-153044500-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153044500
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153044500
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 28662
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000472415
  gene symbol: PLXNB3
  hgvsc: ENST00000472415.1:n.404G>C
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000442736
  ensembl transcript: ENST00000538966
  gene symbol: PLXNB3
  hgvsc: ENST00000538966.1:c.*6G>C
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.-1181G>C
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000445569
  ensembl transcript: ENST00000538776
  gene symbol: PLXNB3
  hgvsc: ENST00000538776.1:c.*6G>C
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000355378
  ensembl transcript: ENST00000361971
  gene symbol: PLXNB3
  hgvsc: ENST00000361971.5:c.*6G>C
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000469190
  gene symbol: PLXNB3
  hgvsc: ENST00000469190.1:n.331G>C
  variant of: http://identifiers.org/hgnc/9105
canonical: false
consequence: 5' UTR
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

X-153044510-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153044510
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153044510
    reference: chr 0
allele count: 2
allele frequency: 8.258661271007969e-5
allele num: 24217
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.-1171G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000355378
  ensembl transcript: ENST00000361971
  gene symbol: PLXNB3
  hgvsc: ENST00000361971.5:c.*16G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000445569
  ensembl transcript: ENST00000538776
  gene symbol: PLXNB3
  hgvsc: ENST00000538776.1:c.*16G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000442736
  ensembl transcript: ENST00000538966
  gene symbol: PLXNB3
  hgvsc: ENST00000538966.1:c.*16G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000469190
  gene symbol: PLXNB3
  hgvsc: ENST00000469190.1:n.341G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000472415
  gene symbol: PLXNB3
  hgvsc: ENST00000472415.1:n.414G>A
  variant of: http://identifiers.org/hgnc/9105
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

X-153044519-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153044519
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153044519
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 21682
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.-1162C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000442736
  ensembl transcript: ENST00000538966
  gene symbol: PLXNB3
  hgvsc: ENST00000538966.1:c.*25C>T
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000469190
  gene symbol: PLXNB3
  hgvsc: ENST00000469190.1:n.350C>T
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000445569
  ensembl transcript: ENST00000538776
  gene symbol: PLXNB3
  hgvsc: ENST00000538776.1:c.*25C>T
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000472415
  gene symbol: PLXNB3
  hgvsc: ENST00000472415.1:n.423C>T
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000355378
  ensembl transcript: ENST00000361971
  gene symbol: PLXNB3
  hgvsc: ENST00000361971.5:c.*25C>T
  variant of: http://identifiers.org/hgnc/9105
canonical: false
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 18223
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

X-153044520-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153044520
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153044520
    reference: chr 0
allele count: 2
allele frequency: 9.45000945000945e-5
allele num: 21164
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000469190
  gene symbol: PLXNB3
  hgvsc: ENST00000469190.1:n.351G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000442736
  ensembl transcript: ENST00000538966
  gene symbol: PLXNB3
  hgvsc: ENST00000538966.1:c.*26G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000355378
  ensembl transcript: ENST00000361971
  gene symbol: PLXNB3
  hgvsc: ENST00000361971.5:c.*26G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000445569
  ensembl transcript: ENST00000538776
  gene symbol: PLXNB3
  hgvsc: ENST00000538776.1:c.*26G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.-1161G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000472415
  gene symbol: PLXNB3
  hgvsc: ENST00000472415.1:n.424G>A
  variant of: http://identifiers.org/hgnc/9105
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18468
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ

X-153044521-G-GATCCAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153044521
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153044527
    reference: chr 0
allele count: 1
allele frequency: 4.735296903115826e-5
allele num: 21118
alternate allele: GATCCAC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000469190
  gene symbol: PLXNB3
  hgvsc: ENST00000469190.1:n.353_358dupATCCAC
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000472415
  gene symbol: PLXNB3
  hgvsc: ENST00000472415.1:n.426_431dupATCCAC
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000445569
  ensembl transcript: ENST00000538776
  gene symbol: PLXNB3
  hgvsc: ENST00000538776.1:c.*28_*33dupATCCAC
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000442736
  ensembl transcript: ENST00000538966
  gene symbol: PLXNB3
  hgvsc: ENST00000538966.1:c.*28_*33dupATCCAC
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000355378
  ensembl transcript: ENST00000361971
  gene symbol: PLXNB3
  hgvsc: ENST00000361971.5:c.*28_*33dupATCCAC
  variant of: http://identifiers.org/hgnc/9105
canonical: false
consequence: 5' UTR
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7622
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17818
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 2433
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 18327
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1134
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

X-153044534-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153044534
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153044534
    reference: chr 0
allele count: 22
allele frequency: 1.430429128738622e-3
allele num: 15380
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000442736
  ensembl transcript: ENST00000538966
  gene symbol: PLXNB3
  hgvsc: ENST00000538966.1:c.*40C>T
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000355378
  ensembl transcript: ENST00000361971
  gene symbol: PLXNB3
  hgvsc: ENST00000361971.5:c.*40C>T
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.-1147C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000469190
  gene symbol: PLXNB3
  hgvsc: ENST00000469190.1:n.365C>T
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000445569
  ensembl transcript: ENST00000538776
  gene symbol: PLXNB3
  hgvsc: ENST00000538776.1:c.*40C>T
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000472415
  gene symbol: PLXNB3
  hgvsc: ENST00000472415.1:n.438C>T
  variant of: http://identifiers.org/hgnc/9105
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5171
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 16522
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 203
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 29365
  bin: 2.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4785
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 28219
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 9.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4279
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 32
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

X-153044535-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153044535
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153044535
    reference: chr 0
allele count: 4
allele frequency: 2.723126148818844e-4
allele num: 14689
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.-1146G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000469190
  gene symbol: PLXNB3
  hgvsc: ENST00000469190.1:n.366G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000472415
  gene symbol: PLXNB3
  hgvsc: ENST00000472415.1:n.439G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000445569
  ensembl transcript: ENST00000538776
  gene symbol: PLXNB3
  hgvsc: ENST00000538776.1:c.*41G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000442736
  ensembl transcript: ENST00000538966
  gene symbol: PLXNB3
  hgvsc: ENST00000538966.1:c.*41G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000355378
  ensembl transcript: ENST00000361971
  gene symbol: PLXNB3
  hgvsc: ENST00000361971.5:c.*41G>A
  variant of: http://identifiers.org/hgnc/9105
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16647
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genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29357
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 115
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genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP

X-153044539-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153044539
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153044539
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 13114
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000442736
  ensembl transcript: ENST00000538966
  gene symbol: PLXNB3
  hgvsc: ENST00000538966.1:c.*45C>T
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000445569
  ensembl transcript: ENST00000538776
  gene symbol: PLXNB3
  hgvsc: ENST00000538776.1:c.*45C>T
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.-1142C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000469190
  gene symbol: PLXNB3
  hgvsc: ENST00000469190.1:n.370C>T
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000355378
  ensembl transcript: ENST00000361971
  gene symbol: PLXNB3
  hgvsc: ENST00000361971.5:c.*45C>T
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000472415
  gene symbol: PLXNB3
  hgvsc: ENST00000472415.1:n.443C>T
  variant of: http://identifiers.org/hgnc/9105
canonical: false
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 574
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff

X-153044540-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153044540
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153044540
    reference: chr 0
allele count: 62
allele frequency: 4.727771846881196e-3
allele num: 13114
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000472415
  gene symbol: PLXNB3
  hgvsc: ENST00000472415.1:n.444G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.-1141G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198753
  ensembl transcript: ENST00000469190
  gene symbol: PLXNB3
  hgvsc: ENST00000469190.1:n.371G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000445569
  ensembl transcript: ENST00000538776
  gene symbol: PLXNB3
  hgvsc: ENST00000538776.1:c.*46G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000355378
  ensembl transcript: ENST00000361971
  gene symbol: PLXNB3
  hgvsc: ENST00000361971.5:c.*46G>A
  variant of: http://identifiers.org/hgnc/9105
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000198753
  ensembl protein: ENSP00000442736
  ensembl transcript: ENST00000538966
  gene symbol: PLXNB3
  hgvsc: ENST00000538966.1:c.*46G>A
  variant of: http://identifiers.org/hgnc/9105
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 20
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
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  variant carriers: 4
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 56
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 4
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 6
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 6.25e1
  variant carriers: 4
num of homozygotes: 1
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

X-153045649-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045649
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045649
    reference: chr 0
allele count: 1
allele frequency: 1.783803068141277e-4
allele num: 5606
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 148
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population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 466
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 4.502476361999099e-4
  allele num: 2221
  num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

X-153045678-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045678
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045678
    reference: chr 0
allele count: 1
allele frequency: 1.424501424501424e-4
allele num: 7020
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.-3C>A
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
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  allele num: 123
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population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3606
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4
  num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

X-153045721-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045721
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045721
    reference: chr 0
allele count: 40
allele frequency: 4.839685420447671e-3
allele num: 8265
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.41G>A
  hgvsp: ENSP00000420058.1:p.Arg14His
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg14His
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 40
  allele frequency: 8.795074758135445e-3
  allele num: 4548
  num of homozygotes: 0
population: Latino
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  allele frequency: 0.0e0
  allele num: 135
  num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

X-153045722-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045722
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045722
    reference: chr 0
allele count: 1
allele frequency: 1.209482341557813e-4
allele num: 8268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.42C>T
  hgvsp: ENST00000489426.1:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg14Arg
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 498
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 2.198768689533861e-4
  allele num: 4548
  num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

X-153045726-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045726
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045726
    reference: chr 0
allele count: 1
allele frequency: 1.208167210341911e-4
allele num: 8277
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.46C>G
  hgvsp: ENSP00000420058.1:p.His16Asp
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.His16Asp
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 136
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6
  num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD

X-153045746-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045746
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045746
    reference: chr 0
allele count: 1
allele frequency: 1.206709303728732e-4
allele num: 8287
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.66C>T
  hgvsp: ENST00000489426.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly22Gly
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 163
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff

X-153045758-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045758
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045758
    reference: chr 0
allele count: 1
allele frequency: 1.206418144528894e-4
allele num: 8289
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.78C>T
  hgvsp: ENST00000489426.1:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro26Pro
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4557
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 137
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

X-153045800-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045800
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045800
    reference: chr 0
allele count: 1
allele frequency: 1.205836247437598e-4
allele num: 8293
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.120T>C
  hgvsp: ENST00000489426.1:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Tyr40Tyr
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 3.51123595505618e-4
  allele num: 2848
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 138
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD

X-153045805-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045805
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045805
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 8293
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.125C>A
  hgvsp: ENSP00000420058.1:p.Ala42Glu
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala42Glu
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 89
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 496
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

X-153045812-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045812
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045812
    reference: chr 0
allele count: 3142
allele frequency: 3.789651429260644e-1
allele num: 8291
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.132C>T
  hgvsp: ENST00000489426.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 2.5e0
  variant carriers: 127
genotype depth: GenotypeDepth
  all individuals: 10
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 121
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.His44His
num of homozygotes: 297
population: South Asian
  type: Population
  allele count: 2349
  allele frequency: 5.158102766798419e-1
  allele num: 4554
  num of homozygotes: 215
population: European (Non-Finnish)
  type: Population
  allele count: 562
  allele frequency: 1.973314606741573e-1
  allele num: 2848
  num of homozygotes: 51
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-153045813-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045813
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045813
    reference: chr 0
allele count: 10
allele frequency: 1.206854936036688e-3
allele num: 8286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.133G>A
  hgvsp: ENSP00000420058.1:p.Asp45Asn
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4
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hgvs: p.Asp45Asn
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 2.195871761089152e-4
  allele num: 4554
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

X-153045826-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045826
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045826
    reference: chr 0
allele count: 3
allele frequency: 3.621001810500905e-4
allele num: 8285
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.146C>G
  hgvsp: ENSP00000420058.1:p.Ala49Gly
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 180
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  variant carriers: 0
hgvs: p.Ala49Gly
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 89
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 3
  allele frequency: 6.58906215681968e-4
  allele num: 4553
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

X-153045837-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045837
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045837
    reference: chr 0
allele count: 1
allele frequency: 1.208313194780087e-4
allele num: 8276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.157G>A
  hgvsp: ENSP00000420058.1:p.Glu53Lys
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2509
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4914
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genotype quality: GenotypeQuality
  all individuals: 179
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3
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  variant carriers: 0
hgvs: p.Glu53Lys
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 2.196836555360281e-4
  allele num: 4552
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

X-153045844-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045844
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045844
    reference: chr 0
allele count: 1
allele frequency: 1.20962864400629e-4
allele num: 8267
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.164A>G
  hgvsp: ENSP00000420058.1:p.Glu55Gly
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
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genotype depth: GenotypeDepth
  all individuals: 151
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 56
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  variant carriers: 0
hgvs: p.Glu55Gly
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 496
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 2.197319270490002e-4
  allele num: 4551
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD

X-153045899-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045899
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045899
    reference: chr 0
allele count: 1
allele frequency: 1.255808112520407e-4
allele num: 7963
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.219G>A
  hgvsp: ENST00000489426.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 10
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hgvs: p.Leu73Leu
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 2.127659574468085e-3
  allele num: 470
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

X-153045912-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045912
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045912
    reference: chr 0
allele count: 1
allele frequency: 1.304461257500652e-4
allele num: 7666
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.232G>A
  hgvsp: ENSP00000420058.1:p.Ala78Thr
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 38
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hgvs: p.Ala78Thr
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 121
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 85
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

X-153045983-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153045983
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153045983
    reference: chr 0
allele count: 2
allele frequency: 4.666355576294914e-4
allele num: 4286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.260+43G>A
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 3
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genotype depth: GenotypeDepth
  all individuals: 628
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
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  allele num: 81
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population: East Asian
  type: Population
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population: European (Non-Finnish)
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  allele num: 1758
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population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
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site quality: InbreedingCoeff
site quality: DP
site quality: QD
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X-153046509-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046509
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046509
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 124
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.-33C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.-33C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
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  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-162C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
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  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.-33C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
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  gene symbol: SRPK3
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  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
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site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
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X-153046518-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046518
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046518
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.-24G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.-24G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
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  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
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  hgvsc: ENST00000370108.3:c.-24G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
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  ensembl protein: ENSP00000420058
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  gene symbol: SRPK3
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  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
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site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
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site quality: InbreedingCoeff

X-153046532-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046532
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046532
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 193
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-139C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.-10C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
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  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
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  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
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  ensembl protein: ENSP00000359126
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  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.-10C>A
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
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X-153046533-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046533
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046533
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.-9G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
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  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-138G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
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  consequence: 5_prime_UTR_variant
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annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

X-153046543-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046543
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046543
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.2T>A
  hgvsp: ENSP00000359126.3:p.Met1?
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-128T>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.2T>A
  hgvsp: ENSP00000359122.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.2T>A
  hgvsp: ENSP00000377376.3:p.Met1?
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.2T>A
  hgvsp: ENSP00000359119.3:p.Met1?
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: start lost
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2
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hgvs: p.Met1?
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

X-153046559-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046559
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046559
    reference: chr 0
allele count: 1
allele frequency: 1.049317943336831e-3
allele num: 953
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.18C>A
  hgvsp: ENST00000370104.1:c.18C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.18C>A
  hgvsp: ENST00000393786.3:c.18C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-112C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.18C>A
  hgvsp: ENST00000370108.3:c.18C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.18C>A
  hgvsp: ENST00000370101.3:c.18C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27657
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3554
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  variant carriers: 0
hgvs: p.Gly6Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

X-153046559-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046559
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046559
    reference: chr 0
allele count: 2
allele frequency: 2.098635886673662e-3
allele num: 953
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-112C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.18C>T
  hgvsp: ENST00000370108.3:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.18C>T
  hgvsp: ENST00000370101.3:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.18C>T
  hgvsp: ENST00000370104.1:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.18C>T
  hgvsp: ENST00000393786.3:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 249
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  variant carriers: 0
hgvs: p.Gly6Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

X-153046570-A-ACAGCGGCGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046570
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046579
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 1722
alternate allele: ACAGCGGCGG
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.42_50dupCGGCGGCAG
  hgvsp: ENSP00000359126.3:p.Gly15_Ser17dup
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.42_50dupCGGCGGCAG
  hgvsp: ENSP00000359119.3:p.Gly15_Ser17dup
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-18_-10dupCGGCGGCAG
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.42_50dupCGGCGGCAG
  hgvsp: ENSP00000377376.3:p.Gly15_Ser17dup
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.42_50dupCGGCGGCAG
  hgvsp: ENSP00000359122.1:p.Gly15_Ser17dup
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.13_21dupCGGCGGCAG
  hgvsp: ENSP00000402300.1:p.Ala5_Ala7dup
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28039
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4468
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26379
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly15_Ser17dup
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum

X-153046570-ACAGCGGCGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046570
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046561
    reference: chr 0
allele count: 2
allele frequency: 1.16144018583043e-3
allele num: 1722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.42_50delCGGCGGCAG
  hgvsp: ENSP00000377376.3:p.Gly15_Ser17del
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.42_50delCGGCGGCAG
  hgvsp: ENSP00000359126.3:p.Gly15_Ser17del
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.13_21delCGGCGGCAG
  hgvsp: ENSP00000402300.1:p.Ala5_Ala7del
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.42_50delCGGCGGCAG
  hgvsp: ENSP00000359122.1:p.Gly15_Ser17del
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.42_50delCGGCGGCAG
  hgvsp: ENSP00000359119.3:p.Gly15_Ser17del
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-18_-10delCGGCGGCAG
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28039
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4468
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 26379
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly15_Ser17del
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: ACAGCGGCGG
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

X-153046583-CGGCGGCAGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046583
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046574
    reference: chr 0
allele count: 1
allele frequency: 3.045994517209869e-4
allele num: 3283
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.43_51delGGCGGCAGT
  hgvsp: ENSP00000359122.1:p.Gly15_Ser17del
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.14_22delGGCGGCAGT
  hgvsp: ENSP00000402300.1:p.Val8_Ala10del
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-17_-9delGGCGGCAGT
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.43_51delGGCGGCAGT
  hgvsp: ENSP00000359119.3:p.Gly15_Ser17del
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.43_51delGGCGGCAGT
  hgvsp: ENSP00000359126.3:p.Gly15_Ser17del
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.43_51delGGCGGCAGT
  hgvsp: ENSP00000377376.3:p.Gly15_Ser17del
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3842
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly15_Ser17del
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: CGGCGGCAGT
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

X-153046584-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046584
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046584
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 3487
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.14G>A
  hgvsp: ENST00000430541.1:c.14G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.43G>A
  hgvsp: ENSP00000359122.1:p.Gly15Ser
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-17G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-87G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.43G>A
  hgvsp: ENSP00000359126.3:p.Gly15Ser
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.43G>A
  hgvsp: ENSP00000359119.3:p.Gly15Ser
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.43G>A
  hgvsp: ENSP00000377376.3:p.Gly15Ser
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 28710
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3626
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4942
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 1
hgvs: p.Gly15Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

X-153046586-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046586
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046586
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 3706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.45C>A
  hgvsp: ENST00000393786.3:c.45C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.45C>A
  hgvsp: ENST00000370101.3:c.45C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.45C>A
  hgvsp: ENST00000370108.3:c.45C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-85C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.16C>A
  hgvsp: ENSP00000402300.1:p.Ala6Glu
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.45C>A
  hgvsp: ENST00000370104.1:c.45C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-15C>A
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29428
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6176
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.75e1
  variant carriers: 2
hgvs: p.Ala6Glu
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

X-153046587-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046587
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046587
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 3951
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.46G>A
  hgvsp: ENSP00000359126.3:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.46G>A
  hgvsp: ENSP00000359119.3:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.17G>A
  hgvsp: ENST00000430541.1:c.17G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.46G>A
  hgvsp: ENSP00000377376.3:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.46G>A
  hgvsp: ENSP00000359122.1:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-84G>A
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3071
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 449
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly16Ser
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

X-153046588-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046588
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046588
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 4047
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.47G>A
  hgvsp: ENSP00000359122.1:p.Gly16Asp
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.47G>A
  hgvsp: ENSP00000359119.3:p.Gly16Asp
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-13G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.47G>A
  hgvsp: ENSP00000377376.3:p.Gly16Asp
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.18G>A
  hgvsp: ENSP00000402300.1:p.Ala7Thr
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.47G>A
  hgvsp: ENSP00000359126.3:p.Gly16Asp
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-83G>A
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27569
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5525
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly16Asp
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD

X-153046591-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046591
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046591
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 4479
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.21G>A
  hgvsp: ENSP00000402300.1:p.Val8Ile
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.50G>A
  hgvsp: ENSP00000359122.1:p.Ser17Asn
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.50G>A
  hgvsp: ENSP00000359119.3:p.Ser17Asn
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-80G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.50G>A
  hgvsp: ENSP00000359126.3:p.Ser17Asn
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-10G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.50G>A
  hgvsp: ENSP00000377376.3:p.Ser17Asn
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7027
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28356
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser17Asn
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP

X-153046598-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046598
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046598
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 5371
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.57C>A
  hgvsp: ENSP00000359126.3:p.Ser19Arg
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-3C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-73C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.28C>A
  hgvsp: ENSP00000402300.1:p.Ala10Glu
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.57C>A
  hgvsp: ENSP00000377376.3:p.Ser19Arg
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.57C>A
  hgvsp: ENSP00000359119.3:p.Ser19Arg
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.57C>A
  hgvsp: ENSP00000359122.1:p.Ser19Arg
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33415
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30887
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2766
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Ser19Arg
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ

X-153046609-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046609
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046609
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 6907
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+9C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.39C>T
  hgvsp: ENSP00000402300.1:p.Arg14Trp
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.59+9C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.59+9C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.59+9C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.59+9C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-62C>T
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33496
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 2815
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 1691
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 977
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg14Trp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS

X-153046610-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046610
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046610
    reference: chr 0
allele count: 1
allele frequency: 1.351533991079876e-4
allele num: 7399
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+10G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.59+10G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-61G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.40G>A
  hgvsp: ENSP00000402300.1:p.Arg14Gln
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.59+10G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.59+10G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.59+10G>A
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14288
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 324
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg14Gln
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP

X-153046620-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046620
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046620
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 9987
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.50C>G
  hgvsp: ENSP00000402300.1:p.His17Gln
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.59+20C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.59+20C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-51C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.59+20C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+20C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.59+20C>G
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17451
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genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3828
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27012
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His17Gln
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-153046621-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046621
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046621
    reference: chr 0
allele count: 10
allele frequency: 9.693679720822024e-4
allele num: 10316
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.59+21C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+21C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.59+21C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.59+21C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.51C>A
  hgvsp: ENSP00000402300.1:p.Pro18Thr
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-50C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.59+21C>A
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 26703
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  variant carriers: 2
hgvs: p.Pro18Thr
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

X-153046622-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046622
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046622
    reference: chr 0
allele count: 1
allele frequency: 9.46880030300161e-5
allele num: 10561
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+22C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.52C>T
  hgvsp: ENSP00000402300.1:p.Pro18Leu
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.59+22C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-49C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.59+22C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.59+22C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.59+22C>T
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3665
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1729
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 817
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro18Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP

X-153046623-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046623
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046623
    reference: chr 0
allele count: 1
allele frequency: 9.245562130177515e-5
allele num: 10816
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+23G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.59+23G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.59+23G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.53G>A
  hgvsp: ENST00000430541.1:c.53G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.59+23G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.59+23G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-48G>A
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
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genotype depth: GenotypeDepth
  all individuals: 0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1341
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hgvs: p.Pro18Pro
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

X-153046627-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046627
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046627
    reference: chr 0
allele count: 1
allele frequency: 7.644091117566121e-5
allele num: 13082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.57C>A
  hgvsp: ENSP00000402300.1:p.Pro20Thr
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-44C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+27C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.59+27C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.59+27C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
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  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.59+27C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.59+27C>A
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22368
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro20Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

X-153046634-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046634
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046634
    reference: chr 0
allele count: 5
allele frequency: 2.996164908916587e-4
allele num: 16688
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.59+34C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-37C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.64C>T
  hgvsp: ENSP00000402300.1:p.Ala22Val
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+34C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.59+34C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.59+34C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.59+34C>T
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29492
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1198
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 17638
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 27952
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genotype quality: GenotypeQuality
  all individuals: 1034
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genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6469
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala22Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

X-153046635-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046635
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046635
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 17633
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.59+35G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.65G>A
  hgvsp: ENST00000430541.1:c.65G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.59+35G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+35G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.59+35G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.59+35G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-36G>A
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: synonymous
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30084
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 482
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6864
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala22Ala
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

X-153046635-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046635
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046635
    reference: chr 0
allele count: 1
allele frequency: 5.67118471048602e-5
allele num: 17633
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.59+35G>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.59+35G>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.65G>T
  hgvsp: ENST00000430541.1:c.65G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.59+35G>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+35G>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-36G>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.59+35G>T
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30084
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28687
  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 482
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala22Ala
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS

X-153046637-C-CTGAGAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046637
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046643
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 19164
alternate allele: CTGAGAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.60-33_60-32insGAGAAT
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.60-33_60-32insGAGAAT
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.60-33_60-32insGAGAAT
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.60-33_60-32insGAGAAT
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-33_261-32insGAGAAT
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.68_69insGAGAAT
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+38_-1+39insGAGAAT
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: inframe insertion
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 150
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 748
  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 502
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genotype quality: GenotypeQuality
  all individuals: 939
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genotype quality: GenotypeQuality
  all individuals: 15438
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser23_Leu24insGluAsn
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ

X-153046643-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046643
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046643
    reference: chr 0
allele count: 2
allele frequency: 8.668140250509253e-5
allele num: 23073
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.60-28T>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.73T>A
  hgvsp: ENSP00000402300.1:p.Met25Lys
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.60-28T>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.60-28T>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.60-28T>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+43T>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-28T>A
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 756
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  variant carriers: 0
hgvs: p.Met25Lys
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

X-153046655-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046655
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046655
    reference: chr 0
allele count: 1
allele frequency: 3.165057762304162e-5
allele num: 31595
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.60-16C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.60-16C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.60-16C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-16C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+55C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.85C>T
  hgvsp: ENSP00000402300.1:p.Thr29Ile
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.60-16C>T
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11796
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 369
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  variant carriers: 0
hgvs: p.Thr29Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP

X-153046662-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046662
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046662
    reference: chr 0
allele count: 4
allele frequency: 1.116196004018306e-4
allele num: 35836
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+62C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.60-9C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-9C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.92C>T
  hgvsp: ENST00000430541.1:c.92C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.60-9C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.60-9C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.60-9C>T
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7057
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Pro31Pro
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

X-153046664-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046664
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046664
    reference: chr 0
allele count: 2
allele frequency: 5.37735595407738e-5
allele num: 37193
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.94C>G
  hgvsp: ENSP00000402300.1:p.Thr32Ser
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.60-7C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.60-7C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+64C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.60-7C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.60-7C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-7C>G
  variant of: http://identifiers.org/hgnc/11402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29367
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6529
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr32Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

X-153046665-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046665
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046665
    reference: chr 0
allele count: 1
allele frequency: 2.65097290705689e-5
allele num: 37722
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.261-6C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.60-6C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.60-6C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.-1+65C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.95C>G
  hgvsp: ENST00000430541.1:c.95C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.60-6C>G
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.60-6C>G
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6416
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2345
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30507
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 4.25e1
  variant carriers: 0
hgvs: c.60-6C>G
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ

X-153046673-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046673
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046673
    reference: chr 0
allele count: 1
allele frequency: 2.334430515675701e-5
allele num: 42837
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-65C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.62C>T
  hgvsp: ENSP00000359119.3:p.Ser21Leu
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.62C>T
  hgvsp: ENSP00000359126.3:p.Ser21Leu
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.103C>T
  hgvsp: ENSP00000402300.1:p.Ser35Leu
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.62C>T
  hgvsp: ENSP00000359122.1:p.Ser21Leu
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.62C>T
  hgvsp: ENSP00000377376.3:p.Ser21Leu
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.263C>T
  hgvsp: ENSP00000420058.1:p.Ser88Leu
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28765
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5149
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1247
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1150
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser21Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

X-153046676-AGGCCTCCTGCGGGCCCGAGTCCTC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046676
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046652
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 44245
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsp: ENSP00000377376.3:p.Ala23_Ser30del
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsp: ENSP00000359122.1:p.Ala23_Ser30del
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsp: ENSP00000359126.3:p.Ala23_Ser30del
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsp: ENSP00000359119.3:p.Ala23_Ser30del
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsp: ENSP00000402300.1:p.Ala37_Ser44del
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsp: ENSP00000420058.1:p.Ala90_Ser97del
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: inframe deletion
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4726
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28276
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 16241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1584
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15595
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala23_Ser30del
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: AGGCCTCCTGCGGGCCCGAGTCCTC
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff

X-153046678-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046678
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046678
    reference: chr 0
allele count: 2
allele frequency: 4.466379329596463e-5
allele num: 44779
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.108G>A
  hgvsp: ENSP00000402300.1:p.Ala37Thr
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.67G>A
  hgvsp: ENSP00000359126.3:p.Ala23Thr
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.67G>A
  hgvsp: ENSP00000377376.3:p.Ala23Thr
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-60G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.67G>A
  hgvsp: ENSP00000359122.1:p.Ala23Thr
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.268G>A
  hgvsp: ENSP00000420058.1:p.Ala90Thr
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.67G>A
  hgvsp: ENSP00000359119.3:p.Ala23Thr
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28021
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5402
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4662
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2070
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1202
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala23Thr
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

X-153046681-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046681
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046681
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 46134
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.70T>G
  hgvsp: ENSP00000377376.3:p.Ser24Ala
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.271T>G
  hgvsp: ENSP00000420058.1:p.Ser91Ala
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.70T>G
  hgvsp: ENSP00000359119.3:p.Ser24Ala
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.111T>G
  hgvsp: ENSP00000402300.1:p.Ser38Ala
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.70T>G
  hgvsp: ENSP00000359126.3:p.Ser24Ala
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.70T>G
  hgvsp: ENSP00000359122.1:p.Ser24Ala
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-57T>G
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16379
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5536
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1451
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser24Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP

X-153046686-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046686
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046686
    reference: chr 0
allele count: 1
allele frequency: 2.068594596830913e-5
allele num: 48342
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.276C>A
  hgvsp: ENSP00000420058.1:p.Cys92Ter
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.75C>A
  hgvsp: ENSP00000359122.1:p.Cys25Ter
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.75C>A
  hgvsp: ENSP00000359119.3:p.Cys25Ter
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.75C>A
  hgvsp: ENSP00000359126.3:p.Cys25Ter
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-52C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.116C>A
  hgvsp: ENSP00000402300.1:p.Cys39Ter
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.75C>A
  hgvsp: ENSP00000377376.3:p.Cys25Ter
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 2
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2077
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genotype quality: GenotypeQuality
  all individuals: 16354
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Cys25Ter
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

X-153046686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046686
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046686
    reference: chr 0
allele count: 514
allele frequency: 1.063257622771089e-2
allele num: 48342
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.276C>T
  hgvsp: ENST00000489426.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.116C>T
  hgvsp: ENST00000430541.1:c.116C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.75C>T
  hgvsp: ENST00000370104.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-52C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.75C>T
  hgvsp: ENST00000393786.3:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.75C>T
  hgvsp: ENST00000370108.3:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.75C>T
  hgvsp: ENST00000370101.3:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3701
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genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 16994
  bin: 2.25e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 26370
  bin: 7.5e0
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 5881
  bin: 1.25e1
  variant carriers: 139
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 1.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
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genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
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  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 557
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  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 25356
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 2219
  bin: 3.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 3.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 3858
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2077
  bin: 2.75e1
  variant carriers: 16
hgvs: p.Cys25Cys
num of homozygotes: 14
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

X-153046687-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046687
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046687
    reference: chr 0
allele count: 5
allele frequency: 1.009102100950574e-4
allele num: 49549
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.277G>A
  hgvsp: ENSP00000420058.1:p.Gly93Arg
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.76G>A
  hgvsp: ENSP00000359122.1:p.Gly26Arg
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.76G>A
  hgvsp: ENSP00000359126.3:p.Gly26Arg
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.76G>A
  hgvsp: ENSP00000377376.3:p.Gly26Arg
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.76G>A
  hgvsp: ENSP00000359119.3:p.Gly26Arg
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.117G>A
  hgvsp: ENSP00000402300.1:p.Gly40Arg
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-51G>A
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5900
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17472
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25984
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1121
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25415
  bin: 2.25e1
  variant carriers: 1
hgvs: p.Gly26Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

X-153046692-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046692
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046692
    reference: chr 0
allele count: 1
allele frequency: 1.92474256568184e-5
allele num: 51955
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.122C>T
  hgvsp: ENST00000430541.1:c.122C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.81C>T
  hgvsp: ENST00000370108.3:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.282C>T
  hgvsp: ENST00000489426.1:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.81C>T
  hgvsp: ENST00000370101.3:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.81C>T
  hgvsp: ENST00000370104.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.81C>T
  hgvsp: ENST00000393786.3:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-46C>T
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24861
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18113
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1997
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24622
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro27Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

X-153046693-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046693
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046693
    reference: chr 0
allele count: 4
allele frequency: 7.6057195010648e-5
allele num: 52592
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.283G>A
  hgvsp: ENSP00000420058.1:p.Glu95Lys
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-45G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.82G>A
  hgvsp: ENSP00000359119.3:p.Glu28Lys
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.123G>A
  hgvsp: ENSP00000402300.1:p.Glu42Lys
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.82G>A
  hgvsp: ENSP00000359122.1:p.Glu28Lys
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.82G>A
  hgvsp: ENSP00000359126.3:p.Glu28Lys
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.82G>A
  hgvsp: ENSP00000377376.3:p.Glu28Lys
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4341
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6210
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18373
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2054
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24298
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2362
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 1.25e1
  variant carriers: 1
hgvs: p.Glu28Lys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS

X-153046695-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046695
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046695
    reference: chr 0
allele count: 1
allele frequency: 1.861261563087461e-5
allele num: 53727
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-43G>C
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.84G>C
  hgvsp: ENSP00000359119.3:p.Glu28Asp
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.125G>C
  hgvsp: ENSP00000402300.1:p.Glu42Asp
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.84G>C
  hgvsp: ENSP00000377376.3:p.Glu28Asp
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.84G>C
  hgvsp: ENSP00000359126.3:p.Glu28Asp
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.285G>C
  hgvsp: ENSP00000420058.1:p.Glu95Asp
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.84G>C
  hgvsp: ENSP00000359122.1:p.Glu28Asp
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 951
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 573
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 2187
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu28Asp
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

X-153046696-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046696
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046696
    reference: chr 0
allele count: 1
allele frequency: 1.855941797665225e-5
allele num: 53881
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.85T>C
  hgvsp: ENSP00000359122.1:p.Ser29Pro
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.286T>C
  hgvsp: ENSP00000420058.1:p.Ser96Pro
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.126T>C
  hgvsp: ENSP00000402300.1:p.Ser43Pro
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.85T>C
  hgvsp: ENSP00000377376.3:p.Ser29Pro
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.85T>C
  hgvsp: ENSP00000359126.3:p.Ser29Pro
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.85T>C
  hgvsp: ENSP00000359119.3:p.Ser29Pro
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-42T>C
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6371
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18744
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 1.75e1
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genotype depth: GenotypeDepth
  all individuals: 24002
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genotype depth: GenotypeDepth
  all individuals: 915
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genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
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genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
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genotype quality: GenotypeQuality
  all individuals: 75
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genotype quality: GenotypeQuality
  all individuals: 609
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genotype quality: GenotypeQuality
  all individuals: 2796
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2390
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser29Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-153046698-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046698
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046698
    reference: chr 0
allele count: 1
allele frequency: 1.826217173746302e-5
allele num: 54758
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.87C>G
  hgvsp: ENST00000370101.3:c.87C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.87C>G
  hgvsp: ENST00000393786.3:c.87C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.87C>G
  hgvsp: ENST00000370104.1:c.87C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.288C>G
  hgvsp: ENST00000489426.1:c.288C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.87C>G
  hgvsp: ENST00000370108.3:c.87C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.128C>G
  hgvsp: ENST00000430541.1:c.128C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-40C>G
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6361
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23650
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 945
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
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genotype quality: GenotypeQuality
  all individuals: 933
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 583
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genotype quality: GenotypeQuality
  all individuals: 2666
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genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser29Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-153046700-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046700
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046700
    reference: chr 0
allele count: 2
allele frequency: 3.614479605298827e-5
allele num: 55333
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-38C>T
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.130C>T
  hgvsp: ENSP00000402300.1:p.Ser44Leu
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.89C>T
  hgvsp: ENSP00000377376.3:p.Ser30Leu
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.89C>T
  hgvsp: ENSP00000359119.3:p.Ser30Leu
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.89C>T
  hgvsp: ENSP00000359122.1:p.Ser30Leu
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.290C>T
  hgvsp: ENSP00000420058.1:p.Ser97Leu
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.89C>T
  hgvsp: ENSP00000359126.3:p.Ser30Leu
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4820
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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genotype depth: GenotypeDepth
  all individuals: 2769
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19085
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 287
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser30Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

X-153046700-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046700
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046700
    reference: chr 0
allele count: 1
allele frequency: 1.807239802649413e-5
allele num: 55333
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.290C>A
  hgvsp: ENSP00000420058.1:p.Ser97Ter
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.130C>A
  hgvsp: ENSP00000402300.1:p.Ser44Ter
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.89C>A
  hgvsp: ENSP00000359122.1:p.Ser30Ter
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.89C>A
  hgvsp: ENSP00000359119.3:p.Ser30Ter
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.89C>A
  hgvsp: ENSP00000359126.3:p.Ser30Ter
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-38C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.89C>A
  hgvsp: ENSP00000377376.3:p.Ser30Ter
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6433
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2218
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19085
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23394
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2582
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser30Ter
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

X-153046704-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046704
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046704
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 57574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.93C>A
  hgvsp: ENST00000370108.3:c.93C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-34C>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.93C>A
  hgvsp: ENST00000370101.3:c.93C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.294C>A
  hgvsp: ENST00000489426.1:c.294C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.134C>A
  hgvsp: ENST00000430541.1:c.134C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.93C>A
  hgvsp: ENST00000393786.3:c.93C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.93C>A
  hgvsp: ENST00000370104.1:c.93C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: synonymous
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22210
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2371
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2415
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly31Gly
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum

X-153046704-CTCCGAACTAGCCCTGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046704
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046688
    reference: chr 0
allele count: 1
allele frequency: 1.736895126272276e-5
allele num: 57574
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsp: ENSP00000359119.3:p.Ser32ProfsTer33
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsp: ENSP00000359126.3:p.Ser32ProfsTer33
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsp: ENSP00000420058.1:p.Ser99ProfsTer33
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsp: ENSP00000377376.3:p.Ser32ProfsTer33
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsp: ENSP00000359122.1:p.Ser32ProfsTer33
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsp: ENSP00000402300.1:p.Ser46ProfsTer33
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5110
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22653
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2415
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2371
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20357
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser32ProfsTer33
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: CTCCGAACTAGCCCTGG
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ

X-153046708-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24153046708
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24153046708
    reference: chr 0
allele count: 5
allele frequency: 8.410711882653748e-5
allele num: 59448
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000402300
  ensembl transcript: ENST00000430541
  gene symbol: SRPK3
  hgvsc: ENST00000430541.1:c.138G>A
  hgvsp: ENSP00000402300.1:p.Glu47Lys
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359122
  ensembl transcript: ENST00000370104
  gene symbol: SRPK3
  hgvsc: ENST00000370104.1:c.97G>A
  hgvsp: ENSP00000359122.1:p.Glu33Lys
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359118
  ensembl transcript: ENST00000370100
  gene symbol: SRPK3
  hgvsc: ENST00000370100.1:c.1-30G>A
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359126
  ensembl transcript: ENST00000370108
  gene symbol: SRPK3
  hgvsc: ENST00000370108.3:c.97G>A
  hgvsp: ENSP00000359126.3:p.Glu33Lys
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000377376
  ensembl transcript: ENST00000393786
  gene symbol: SRPK3
  hgvsc: ENST00000393786.3:c.97G>A
  hgvsp: ENSP00000377376.3:p.Glu33Lys
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000420058
  ensembl transcript: ENST00000489426
  gene symbol: SRPK3
  hgvsc: ENST00000489426.1:c.298G>A
  hgvsp: ENSP00000420058.1:p.Glu100Lys
  variant of: http://identifiers.org/hgnc/11402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184343
  ensembl protein: ENSP00000359119
  ensembl transcript: ENST00000370101
  gene symbol: SRPK3
  hgvsc: ENST00000370101.3:c.97G>A
  hgvsp: ENSP00000359119.3:p.Glu33Lys
  variant of: http://identifiers.org/hgnc/11402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu33Lys
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16165
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 823
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 173
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2757
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2142
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.21e0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.15e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.666e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.62e-1

DP
type: SiteQuality
SIO_000300: 5.28308e5

QD
type: SiteQuality
SIO_000300: 1.283e1

GenotypeQuality
all individuals: 2909
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 384
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 112
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1710
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 6.944444444444444e-3
allele num: 144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13774
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 5.770340450086555e-4
allele num: 1733
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.77e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.713e0

QD
type: SiteQuality
SIO_000300: 7.55e0

FS
type: SiteQuality
SIO_000300: 1.745e0

VQSLOD
type: SiteQuality
SIO_000300: -1.763e0

DP
type: SiteQuality
SIO_000300: 4.68036e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.11e-1

GenotypeQuality
all individuals: 928
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26758
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2303
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1457
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12445
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 539
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 139
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.38898e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.205e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.14e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.55e-1

GenotypeQuality
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1854
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 788
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 27121
bin: 7.5e0
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1325
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 133
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.642845408247084e-4
allele num: 12174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1416
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.098e0

QD
type: SiteQuality
SIO_000300: 1.388e1

MQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.12e-1

FS
type: SiteQuality
SIO_000300: 4.513e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.27e-2

DP
type: SiteQuality
SIO_000300: 4.34184e5

VQSLOD
type: SiteQuality
SIO_000300: -8.73e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 141
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1770
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.237232289950576e-5
allele num: 12140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1301
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 125
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1409
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2073
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.339e0

MQRankSum
type: SiteQuality
SIO_000300: -1.154e0

MQ
type: SiteQuality
SIO_000300: 5.465e1

QD
type: SiteQuality
SIO_000300: 7.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.28e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.599e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.067e0

DP
type: SiteQuality
SIO_000300: 4.30247e5

GenotypeQuality
all individuals: 2931
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 848
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9542
bin: 2.25e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 316
num of homozygotes: 0

African
type: Population
allele count: 22
allele frequency: 7.596685082872928e-3
allele num: 2896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8939
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1475
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 958
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

QD
type: SiteQuality
SIO_000300: 1.467e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.07e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

FS
type: SiteQuality
SIO_000300: 1.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

DP
type: SiteQuality
SIO_000300: 3.68736e5

GenotypeQuality
all individuals: 693
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1065
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4806
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3132
bin: 1.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2821
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 94
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 645
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 4.449388209121246e-3
allele num: 899
num of homozygotes: 1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.43e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

FS
type: SiteQuality
SIO_000300: 3.129e0

QD
type: SiteQuality
SIO_000300: 1.607e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.309e0

DP
type: SiteQuality
SIO_000300: 3.63989e5

GenotypeQuality
all individuals: 140
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 9.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1250
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7629
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 545
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 216
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.55e-1

DP
type: SiteQuality
SIO_000300: 3.55004e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.497e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.710000000000001e-2

GenotypeQuality
all individuals: 6015
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 9.75e1
variant carriers: 59

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 100
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 826
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 165
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 116
bin: 8.25e1
variant carriers: 4

Latino
type: Population
allele count: 2
allele frequency: 3.663003663003663e-3
allele num: 546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

African
type: Population
allele count: 60
allele frequency: 2.306805074971165e-2
allele num: 2601
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1251
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

DP
type: SiteQuality
SIO_000300: 3.5484e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.93e-1

QD
type: SiteQuality
SIO_000300: 1.573e1

VQSLOD
type: SiteQuality
SIO_000300: 3.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.22e-2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2595
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 111
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.535e-1

FS
type: SiteQuality
SIO_000300: 9.523e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.71e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.081e0

DP
type: SiteQuality
SIO_000300: 9.1363e4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.927e0

QD
type: SiteQuality
SIO_000300: 1.147e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.061855670103093e-3
allele num: 485
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2570
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.255e1

VQSLOD
type: SiteQuality
SIO_000300: -5.223e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.81e-2

DP
type: SiteQuality
SIO_000300: 1.24562e5

FS
type: SiteQuality
SIO_000300: 6.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.433e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.25e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 91
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 163
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.05e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.93e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-1

FS
type: SiteQuality
SIO_000300: 5.95e-1

DP
type: SiteQuality
SIO_000300: 1.56881e5

QD
type: SiteQuality
SIO_000300: 2.246e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.699999999999999e-2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 91
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 163
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.928e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.725e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-1

DP
type: SiteQuality
SIO_000300: 1.56051e5

QD
type: SiteQuality
SIO_000300: 1.579e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.48e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 163
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.195871761089152e-4
allele num: 4554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 89
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2833
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.34e-2

DP
type: SiteQuality
SIO_000300: 1.56629e5

MQ
type: SiteQuality
SIO_000300: 5.95e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.645e-1

QD
type: SiteQuality
SIO_000300: 3.339e1

South Asian
type: Population
allele count: 1
allele frequency: 2.194426157559798e-4
allele num: 4557
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 89
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2845
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 137
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.514e-1

QD
type: SiteQuality
SIO_000300: 3.083e1

DP
type: SiteQuality
SIO_000300: 1.56825e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.33e-2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 89
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.512469265893923e-4
allele num: 2847
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 163
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 494
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.56583e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.83e0

QD
type: SiteQuality
SIO_000300: 1.527e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.39e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.1e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4557
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 89
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 163
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VQSLOD
type: SiteQuality
SIO_000300: 5.85e-1

MQ
type: SiteQuality
SIO_000300: 5.881e1

DP
type: SiteQuality
SIO_000300: 1.56966e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.12e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.076e1

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 4557
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 163
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.56597e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

QD
type: SiteQuality
SIO_000300: 9.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.07e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.317e-1

European (Finnish)
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allele count: 1
allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

African
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allele frequency: 1.048387096774194e-1
allele num: 496
num of homozygotes: 3

East Asian
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allele frequency: 5.705521472392638e-1
allele num: 163
num of homozygotes: 22

Latino
type: Population
allele count: 52
allele frequency: 3.741007194244604e-1
allele num: 139
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Other
type: Population
allele count: 33
allele frequency: 3.707865168539326e-1
allele num: 89
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.065e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

FS
type: SiteQuality
SIO_000300: 5.23e-1

QD
type: SiteQuality
SIO_000300: 2.434e1

VQSLOD
type: SiteQuality
SIO_000300: 4.656e1

DP
type: SiteQuality
SIO_000300: 3.9014e5

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.96e-1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 161
num of homozygotes: 0

European (Non-Finnish)
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allele count: 9
allele frequency: 3.161222339304531e-3
allele num: 2847
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 496
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 137
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 89
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 3.264e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.6458e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.74e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

QD
type: SiteQuality
SIO_000300: 1.761e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2848
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 495
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 137
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 161
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.46e-2

MQ
type: SiteQuality
SIO_000300: 5.947e1

QD
type: SiteQuality
SIO_000300: 3.337e1

VQSLOD
type: SiteQuality
SIO_000300: -3.542e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

DP
type: SiteQuality
SIO_000300: 1.63589e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.732e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2841
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 135
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 161
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 89
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.63293e5

QD
type: SiteQuality
SIO_000300: 2.898e1

VQSLOD
type: SiteQuality
SIO_000300: -1.192e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.04e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 159
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2835
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 89
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 135
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.98e-2

MQ
type: SiteQuality
SIO_000300: 5.937e1

QD
type: SiteQuality
SIO_000300: 3.308e1

DP
type: SiteQuality
SIO_000300: 1.62888e5

VQSLOD
type: SiteQuality
SIO_000300: 8.36e-1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2723
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.52032e5

QD
type: SiteQuality
SIO_000300: 3.194e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.59e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.322e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2659
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 157
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.387774594078319e-4
allele num: 4188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.726e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e0

FS
type: SiteQuality
SIO_000300: 3.072e0

QD
type: SiteQuality
SIO_000300: 1.21e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.02e-1

DP
type: SiteQuality
SIO_000300: 1.40793e5

MQRankSum
type: SiteQuality
SIO_000300: -7.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.47e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 5.899705014749262e-3
allele num: 339
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1937
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.98e-1

FS
type: SiteQuality
SIO_000300: 1.257e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.88e-2

DP
type: SiteQuality
SIO_000300: 6.5694e4

QD
type: SiteQuality
SIO_000300: 1.229e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 15
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.443e-1

QD
type: SiteQuality
SIO_000300: 2.016e1

DP
type: SiteQuality
SIO_000300: 2.3634e4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.164e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 35
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 39
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 3
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

VQSLOD
type: SiteQuality
SIO_000300: -3.724e-1

DP
type: SiteQuality
SIO_000300: 2.9865e4

QD
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SIO_000300: 1.439e1

FS
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.026e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.106e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 50
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 3
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 50
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 4.6486e4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.032e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.3e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 3
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South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 75
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.031e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 4.8946e4

MQRankSum
type: SiteQuality
SIO_000300: 9.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.107e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.221e0

QD
type: SiteQuality
SIO_000300: 1.172e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 72
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 127
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 23
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.22e-1

QD
type: SiteQuality
SIO_000300: 9.25e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.84e-2

DP
type: SiteQuality
SIO_000300: 6.6642e4

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.610966057441253e-3
allele num: 383
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 121
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.18e1

MQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

DP
type: SiteQuality
SIO_000300: 9.6881e4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e-1

FS
type: SiteQuality
SIO_000300: 1.057e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.83e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.533e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

GenotypeQuality
all individuals: 99
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 130
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.808988764044944e-3
allele num: 356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 383
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 8.264462809917356e-3
allele num: 121
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.83e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e-1

FS
type: SiteQuality
SIO_000300: 1.057e0

QD
type: SiteQuality
SIO_000300: 1.18e1

DP
type: SiteQuality
SIO_000300: 9.6881e4

MQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.533e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeQuality
all individuals: 439
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.75e1
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GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 1949
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 751
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 673
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.712e1

QD
type: SiteQuality
SIO_000300: 6.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.45e-2

FS
type: SiteQuality
SIO_000300: 1.866e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 1.16491e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.619999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e0

MQRankSum
type: SiteQuality
SIO_000300: -2.166e0

GenotypeQuality
all individuals: 30
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 85
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 673
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 6.41025641025641e-3
allele num: 156
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.331557922769641e-3
allele num: 751
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.45e-2

FS
type: SiteQuality
SIO_000300: 1.866e0

MQRankSum
type: SiteQuality
SIO_000300: -2.166e0

DP
type: SiteQuality
SIO_000300: 1.16491e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.619999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

QD
type: SiteQuality
SIO_000300: 6.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 4.712e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e0

GenotypeQuality
all individuals: 3
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25046
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 396
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.349206349206349e-4
allele num: 1575
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 103
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1255
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.35e0

DP
type: SiteQuality
SIO_000300: 1.44147e5

MQ
type: SiteQuality
SIO_000300: 5.766e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.229999999999999e-2

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 57
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25722
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GenotypeQuality
all individuals: 236
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variant carriers: 0

GenotypeQuality
all individuals: 133
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 229
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: -1.397e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.080000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

FS
type: SiteQuality
SIO_000300: 5.643e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 1.48328e5

QD
type: SiteQuality
SIO_000300: 5.11e0

GenotypeQuality
all individuals: 388
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26924
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3206
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GenotypeQuality
all individuals: 5278
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variant carriers: 0

GenotypeQuality
all individuals: 133
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 247
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1371
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 93
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1839
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 109
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.5597e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.684e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.96e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

QD
type: SiteQuality
SIO_000300: 1.194e1

GenotypeQuality
all individuals: 496
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 231
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 1158
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1968
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 113
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1447
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 99
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 1.60038e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 9.029999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.86e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

GenotypeQuality
all individuals: 3
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 259
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1490
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.6341e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.799999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.813e1

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 1438
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 127
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 103
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2273
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.09e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.67e-2

DP
type: SiteQuality
SIO_000300: 1.76111e5

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2004
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.75e1
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GenotypeQuality
all individuals: 263
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7322
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 291
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 121
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1989
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2711
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 317
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.0824e5

QD
type: SiteQuality
SIO_000300: 2.027e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.24e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.473e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31099
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 395
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 69
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 217
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 197
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 69
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.36e-2

DP
type: SiteQuality
SIO_000300: 2.66559e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.066e1

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3101
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.36986301369863e-2
allele num: 73
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3481
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 267
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.303e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

FS
type: SiteQuality
SIO_000300: 1.406e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.41e-2

QD
type: SiteQuality
SIO_000300: 8.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.96e-1

DP
type: SiteQuality
SIO_000300: 2.80691e5

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2134
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3971
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 371
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 611
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 85
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4115
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.45993e5

QD
type: SiteQuality
SIO_000300: 1.246e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.68e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.485e0

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

GenotypeQuality
all individuals: 802
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 2

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1853
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 19
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1260
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 64
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 699
bin: 3.25e1
variant carriers: 1

African
type: Population
allele count: 10
allele frequency: 1.377410468319559e-2
allele num: 726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 87
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 669
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4251
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 179
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4020
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.52814e5

VQSLOD
type: SiteQuality
SIO_000300: 1.74e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

QD
type: SiteQuality
SIO_000300: 1.329e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.26e-2

FS
type: SiteQuality
SIO_000300: 4.781e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

GenotypeQuality
all individuals: 4096
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4381
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 189
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 89
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 407
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.462447672986949e-4
allele num: 4061
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.42e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.33e-1

FS
type: SiteQuality
SIO_000300: 8.316000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -1.732e0

QD
type: SiteQuality
SIO_000300: 1.713e1

DP
type: SiteQuality
SIO_000300: 3.61138e5

GenotypeQuality
all individuals: 24839
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4117
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4100
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 771
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 409
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.167786689789725e-4
allele num: 4613
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 139
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.792e0

QD
type: SiteQuality
SIO_000300: 7.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.948e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.53e-2

DP
type: SiteQuality
SIO_000300: 3.71866e5

MQ
type: SiteQuality
SIO_000300: 5.616e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4319
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 583
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1077
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5812
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.050420168067227e-3
allele num: 952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 108
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 231
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.392e0

QD
type: SiteQuality
SIO_000300: 8.98e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.57e-2

DP
type: SiteQuality
SIO_000300: 4.06475e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e0

VQSLOD
type: SiteQuality
SIO_000300: -1.583e0

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.33e-1

MQ
type: SiteQuality
SIO_000300: 5.89e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.25e-1

GenotypeQuality
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 112
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 159
bin: 4.75e1
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GenotypeQuality
all individuals: 14
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 471
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 8.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.754820936639119e-3
allele num: 363
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 137
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.062009617818274e-4
allele num: 7902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4608
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

FS
type: SiteQuality
SIO_000300: 1.329e0

VQSLOD
type: SiteQuality
SIO_000300: 3.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.43e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

QD
type: SiteQuality
SIO_000300: 1.818e1

DP
type: SiteQuality
SIO_000300: 4.68505e5

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 1.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 807
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 147
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 922
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 387
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1643
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1396
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.95e-1

DP
type: SiteQuality
SIO_000300: 4.79387e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.92e-2

FS
type: SiteQuality
SIO_000300: 2.767e0

QD
type: SiteQuality
SIO_000300: 1.011e1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 16826
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 2.5e0
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GenotypeQuality
all individuals: 6864
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
all individuals: 564
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GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1643
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 147
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 387
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 922
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.1468441391155e-4
allele num: 4658
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e-1

QD
type: SiteQuality
SIO_000300: 1.011e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.92e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

DP
type: SiteQuality
SIO_000300: 4.79387e5

FS
type: SiteQuality
SIO_000300: 2.767e0

GenotypeQuality
all individuals: 104
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1169
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29584
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1038
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 449
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1517
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4758
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.054e0

QD
type: SiteQuality
SIO_000300: 4.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.19e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.98305e5

MQ
type: SiteQuality
SIO_000300: 5.177e1

GenotypeQuality
all individuals: 8991
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 3.25e1
variant carriers: 1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1919
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 175
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2449
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.730852444829078e-4
allele num: 11555
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5015
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.49e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.4623e5

VQSLOD
type: SiteQuality
SIO_000300: -4.099e-1

QD
type: SiteQuality
SIO_000300: 2.823e1

GenotypeQuality
all individuals: 30430
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8424
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 218
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 933
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2848
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.797268152408339e-4
allele num: 5564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2074
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3685
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 231
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.742e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.255e-1

MQ
type: SiteQuality
SIO_000300: 5.867e1

DP
type: SiteQuality
SIO_000300: 6.31774e5

GenotypeQuality
all individuals: 374
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13057
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1786
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 42
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 259
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1093
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 2.158545140575252e-4
allele num: 18531
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4310
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3325
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.35e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.74607e5

VQSLOD
type: SiteQuality
SIO_000300: 3.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.65e-1

QD
type: SiteQuality
SIO_000300: 2.128e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 651
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1857
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1328
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1855
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13556
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.191299382235374e-5
allele num: 19263
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 261
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2656
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1154
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4496
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.695202576707916e-4
allele num: 5899
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.874e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.002e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

FS
type: SiteQuality
SIO_000300: 7.558e0

DP
type: SiteQuality
SIO_000300: 6.87905e5

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-2

QD
type: SiteQuality
SIO_000300: 9.449999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.49e-2

GenotypeQuality
all individuals: 1861
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6339
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29033
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13475
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1189
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 265
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19549
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2704
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.681520094165125e-4
allele num: 5947
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.18e-1

QD
type: SiteQuality
SIO_000300: 2.824e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.42e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.93687e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 249
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1539
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27601
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 1

GenotypeQuality
all individuals: 448
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15434
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1453
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6283
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5325
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3241
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.509410288582183e-4
allele num: 3985
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22252
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.59e0

MQ
type: SiteQuality
SIO_000300: 5.766e1

VQSLOD
type: SiteQuality
SIO_000300: -1.958e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.668e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.23e-2

DP
type: SiteQuality
SIO_000300: 7.46201e5

GenotypeQuality
all individuals: 51
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2005
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4833
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27109
bin: 2.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5501
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4119
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3391
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23046
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.387e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.4e0

DP
type: SiteQuality
SIO_000300: 7.6106e5

QD
type: SiteQuality
SIO_000300: 3.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-2

GenotypeQuality
all individuals: 1780
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26402
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14720
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3433
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.570081844281613e-5
allele num: 23337
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6403
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-1

DP
type: SiteQuality
SIO_000300: 7.6692e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.16e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.071e1

MQRankSum
type: SiteQuality
SIO_000300: 9.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
all individuals: 753
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4370
bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
all individuals: 898
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1323
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1657
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15696
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5725
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24133
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3555
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6469
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 316
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-2

QD
type: SiteQuality
SIO_000300: 3.157e1

DP
type: SiteQuality
SIO_000300: 7.8036e5

GenotypeQuality
all individuals: 863
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2219
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1717
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 425
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1391
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 2.065262288310616e-4
allele num: 4842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3719
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25207
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5951
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 335
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.631e1

VQSLOD
type: SiteQuality
SIO_000300: 6.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.78e-1

DP
type: SiteQuality
SIO_000300: 8.09744e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

FS
type: SiteQuality
SIO_000300: 1.316e0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-3

GenotypeQuality
all individuals: 1392
bin: 1.75e1
variant carriers: 28

GenotypeQuality
all individuals: 1717
bin: 6.75e1
variant carriers: 11

GenotypeQuality
all individuals: 16354
bin: 6.25e1
variant carriers: 10

GenotypeQuality
all individuals: 805
bin: 1.25e1
variant carriers: 14

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 441
bin: 9.75e1
variant carriers: 403

GenotypeQuality
all individuals: 863
bin: 5.25e1
variant carriers: 12

GenotypeQuality
all individuals: 73
bin: 8.75e1
variant carriers: 7

GenotypeQuality
all individuals: 513
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 926
bin: 4.75e1
variant carriers: 10

GenotypeQuality
all individuals: 457
bin: 7.75e1
variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.586860792636966e-4
allele num: 25207
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.985074626865672e-3
allele num: 335
num of homozygotes: 0

Latino
type: Population
allele count: 19
allele frequency: 3.192740715846076e-3
allele num: 5951
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3719
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1722
num of homozygotes: 0

African
type: Population
allele count: 487
allele frequency: 1.00578273440727e-1
allele num: 4842
num of homozygotes: 14

South Asian
type: Population
allele count: 3
allele frequency: 4.568991775814804e-4
allele num: 6566
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.78e-1

QD
type: SiteQuality
SIO_000300: 1.631e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

FS
type: SiteQuality
SIO_000300: 1.316e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.22e0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-3

DP
type: SiteQuality
SIO_000300: 8.09744e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3657
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1426
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17423
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2119
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 71
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 74
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6084
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1774
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3831
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 7.728273890026663e-5
allele num: 25879
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 5.997600959616154e-4
allele num: 5002
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.299999999999999e-3

DP
type: SiteQuality
SIO_000300: 8.20648e5

VQSLOD
type: SiteQuality
SIO_000300: 3.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

FS
type: SiteQuality
SIO_000300: 4.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.27e-1

QD
type: SiteQuality
SIO_000300: 1.077e1

MQ
type: SiteQuality
SIO_000300: 5.942e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

GenotypeQuality
all individuals: 2315
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1450
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3201
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 275
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.667705849990831e-5
allele num: 27265
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6813
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 371
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1897
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5221
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.47628e5

VQSLOD
type: SiteQuality
SIO_000300: 7.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.106e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

FS
type: SiteQuality
SIO_000300: 3.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.262e0

GenotypeQuality
all individuals: 2180
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3062
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17906
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 81
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6435
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.086602194936434e-4
allele num: 27609
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6857
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1923
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.43842965130456e-4
allele num: 4101
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5291
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

DP
type: SiteQuality
SIO_000300: 8.54631e5

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

MQRankSum
type: SiteQuality
SIO_000300: 2.85e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

QD
type: SiteQuality
SIO_000300: 1.383e1

FS
type: SiteQuality
SIO_000300: 5.595e0

GenotypeQuality
all individuals: 2861
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18771
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1479
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 200
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2362
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24244
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.842978252856616e-4
allele num: 5426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1987
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 8.65022e5

QD
type: SiteQuality
SIO_000300: 2.82e1

GenotypeQuality
all individuals: 1449
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2222
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23584
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1526
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17565
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1002
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2136
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1990
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.525720128336213e-5
allele num: 28363
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6910
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5452
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.278e1

MQRankSum
type: SiteQuality
SIO_000300: 1.65e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.28e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.6701e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.37e-1

GenotypeQuality
all individuals: 2232
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1524
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 101
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 996
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23780
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18970
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28865
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4316
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6971
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 4.847309743092584e-4
allele num: 2063
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.271e0

DP
type: SiteQuality
SIO_000300: 8.77184e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.614e0

QD
type: SiteQuality
SIO_000300: 1.451e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.66e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

GenotypeQuality
all individuals: 635
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1534
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2218
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 102
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2225
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23394
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 77
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 686
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2099
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5577
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.42301636201821e-5
allele num: 29214
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7008
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.287805994051705e-4
allele num: 4371
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.088e1

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

FS
type: SiteQuality
SIO_000300: 8.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.98e-1

DP
type: SiteQuality
SIO_000300: 8.86661e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.76e-1

GenotypeQuality
all individuals: 1013
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1534
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2390
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 287
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2225
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4371
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6682
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29214
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5577
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.426940639269406e-4
allele num: 7008
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2099
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.088e1

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.76e-1

DP
type: SiteQuality
SIO_000300: 8.86661e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
all individuals: 2192
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22653
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 20357
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 786
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 395
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7125
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5855
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6933
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2234
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.12863e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 9.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.496e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.925e0

QD
type: SiteQuality
SIO_000300: 7.69e0

MQRankSum
type: SiteQuality
SIO_000300: -5.17e-1

GenotypeQuality
all individuals: 1520
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2192
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 786
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 395
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6933
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30474
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.707941929974381e-4
allele num: 5855
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7125
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4558
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.925e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.7e-3

QD
type: SiteQuality
SIO_000300: 7.69e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.496e0

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

DP
type: SiteQuality
SIO_000300: 9.12863e5

MQRankSum
type: SiteQuality
SIO_000300: -5.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1