19-3435240-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3435240
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3435240
    reference: chr 19
allele count: 1
allele frequency: 1.454587769826031e-5
allele num: 68748
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.162+35G>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.859+35G>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.958+35G>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.931+35G>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.931+35G>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.859+35G>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.958+35G>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.958+35G>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7952
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14830
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1789
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5103
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19398
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-3435240-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3435240
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3435240
    reference: chr 19
allele count: 1
allele frequency: 1.454587769826031e-5
allele num: 68748
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.958+35G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.859+35G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.162+35G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.931+35G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.958+35G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.859+35G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.931+35G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.958+35G>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7952
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14830
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1789
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9038
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9528
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2472
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19398
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/19-3435246-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3435246
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3435246
    reference: chr 19
allele count: 8
allele frequency: 1.19706718539578e-4
allele num: 66830
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.931+41A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.859+41A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.931+41A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.958+41A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.958+41A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.162+41A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.859+41A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.958+41A>C
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9136
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17248
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8022
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14092
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4070
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16669
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5451
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

19-3435248-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3435248
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3435248
    reference: chr 19
allele count: 1
allele frequency: 1.520588771972508e-5
allele num: 65764
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.931+43T>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.859+43T>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.859+43T>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.162+43T>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.958+43T>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.958+43T>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.931+43T>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.958+43T>G
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7926
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17579
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9178
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5832
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4162
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4055
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

19-3435249-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3435249
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3435249
    reference: chr 19
allele count: 1
allele frequency: 1.536995481233285e-5
allele num: 65062
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.859+44C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.931+44C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.958+44C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.958+44C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.931+44C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.859+44C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.958+44C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.162+44C>G
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13673
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17693
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7866
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4069
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5399
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1667
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

19-3435251-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3435251
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3435251
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 64002
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.958+46C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.958+46C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.859+46C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.162+46C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.859+46C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.931+46C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.958+46C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.931+46C>G
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17935
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2576
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1776
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13215
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

19-3435252-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3435252
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3435252
    reference: chr 19
allele count: 1
allele frequency: 1.577934168586487e-5
allele num: 63374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.931+47C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.859+47C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.931+47C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.162+47C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.958+47C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.958+47C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.958+47C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.859+47C>G
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9096
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7692
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4080
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1795
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3833
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ

19-3435252-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3435252
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3435252
    reference: chr 19
allele count: 6
allele frequency: 9.467605011518919e-5
allele num: 63374
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.958+47C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.859+47C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.958+47C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.162+47C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.931+47C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.931+47C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.958+47C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.859+47C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7692
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9096
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13456
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17955
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8866
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4042
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1795
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 12676
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ

19-3435254-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3435254
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3435254
    reference: chr 19
allele count: 27323
allele frequency: 4.313840032839685e-1
allele num: 63338
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.162+49T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.859+49T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.958+49T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.931+49T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.958+49T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.958+49T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.931+49T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.859+49T>C
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 5873
  bin: 2.25e1
  variant carriers: 3464
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.25e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 17837
  bin: 7.5e0
  variant carriers: 9414
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 2.75e1
  variant carriers: 1648
genotype depth: GenotypeDepth
  all individuals: 14051
  bin: 1.25e1
  variant carriers: 9068
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.25e1
  variant carriers: 736
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9265
  bin: 1.75e1
  variant carriers: 6007
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 3.75e1
  variant carriers: 285
genotype depth: GenotypeDepth
  all individuals: 6362
  bin: 2.5e0
  variant carriers: 1805
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1584
  bin: 5.25e1
  variant carriers: 1039
genotype quality: GenotypeQuality
  all individuals: 2547
  bin: 3.75e1
  variant carriers: 1096
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 9.25e1
  variant carriers: 724
genotype quality: GenotypeQuality
  all individuals: 4178
  bin: 7.5e0
  variant carriers: 850
genotype quality: GenotypeQuality
  all individuals: 6079
  bin: 2.25e1
  variant carriers: 1975
genotype quality: GenotypeQuality
  all individuals: 2136
  bin: 6.25e1
  variant carriers: 920
genotype quality: GenotypeQuality
  all individuals: 1940
  bin: 4.75e1
  variant carriers: 998
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 8.25e1
  variant carriers: 964
num of homozygotes: 6214
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS

19-3435257-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3435257
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3435257
    reference: chr 19
allele count: 2
allele frequency: 3.323584153150758e-5
allele num: 60176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.931+52C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.859+52C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.162+52C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.958+52C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.859+52C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.958+52C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.958+52C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.931+52C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8021
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13912
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9026
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2299
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3837
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1776
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4487
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9457
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4560
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

19-3448962-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3448962
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3448962
    reference: chr 19
allele count: 1
allele frequency: 8.651716500553709e-6
allele num: 115584
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-50C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-50C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-50C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-50C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-50C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-50C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-50C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-50C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10697
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8274
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

19-3448969-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3448969
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3448969
    reference: chr 19
allele count: 21
allele frequency: 1.814254859611231e-4
allele num: 115750
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-43G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-43G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-43G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-43G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-43G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-43G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-43G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-43G>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10696
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 8279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4503
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2313
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2126
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3877
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18324
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum

19-3448970-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3448970
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3448970
    reference: chr 19
allele count: 1
allele frequency: 8.638711795297085e-6
allele num: 115758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-42G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-42G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-42G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-42G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-42G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-42G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-42G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-42G>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10698
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2169
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11094
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

19-3448976-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3448976
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3448976
    reference: chr 19
allele count: 1
allele frequency: 8.630957518427095e-6
allele num: 115862
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-36C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-36C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-36C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-36C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-36C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-36C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-36C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-36C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10701
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12266
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2317
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4463
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1671
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

19-3448982-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3448982
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3448982
    reference: chr 19
allele count: 4
allele frequency: 3.439794988218702e-5
allele num: 116286
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-30T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-30T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-30T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-30T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-30T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-30T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-30T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-30T>C
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2317
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3875
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

19-3448983-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3448983
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3448983
    reference: chr 19
allele count: 39
allele frequency: 3.351321623758292e-4
allele num: 116372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-29G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-29G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-29G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-29G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-29G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-29G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-29G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-29G>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12270
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 10704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1674
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5592
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3878
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 18974
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

19-3448986-ACT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3448986
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3448984
    reference: chr 19
allele count: 1
allele frequency: 8.58663918942126e-6
allele num: 116460
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-20_959-19delTC
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-20_959-19delTC
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-20_860-19delTC
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-20_163-19delTC
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-20_860-19delTC
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-20_932-19delTC
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-20_959-19delTC
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-20_932-19delTC
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12271
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10710
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5594
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3876
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4482
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11199
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: ACT
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-3448987-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3448987
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3448987
    reference: chr 19
allele count: 5
allele frequency: 4.292287617608681e-5
allele num: 116488
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-25C>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-25C>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-25C>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-25C>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-25C>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-25C>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-25C>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-25C>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12272
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10710
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1676
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19153
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4485
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5589
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

19-3448987-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3448987
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3448987
    reference: chr 19
allele count: 1
allele frequency: 8.584575235217362e-6
allele num: 116488
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-25C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-25C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-25C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-25C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-25C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-25C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-25C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-25C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10710
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12272
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5589
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2249
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11203
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

19-3448993-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3448993
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3448993
    reference: chr 19
allele count: 4
allele frequency: 3.419563321763811e-5
allele num: 116974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-19C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-19C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-19C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-19C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-19C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-19C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-19C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-19C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4490
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2079
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4497
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1674
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7369
  bin: 9.75e1
  variant carriers: 4
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-3448994-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3448994
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3448994
    reference: chr 19
allele count: 6
allele frequency: 5.119541289100497e-5
allele num: 117198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-18G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-18G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-18G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-18G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-18G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-18G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-18G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-18G>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

19-3448996-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3448996
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3448996
    reference: chr 19
allele count: 1
allele frequency: 8.512521919743944e-6
allele num: 117474
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-16C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-16C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-16C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-16C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-16C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-16C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-16C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-16C>G
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 12274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11295
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20155
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

19-3449001-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449001
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449001
    reference: chr 19
allele count: 2
allele frequency: 1.693107359937694e-5
allele num: 118126
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-11C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-11C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-11C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-11C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-11C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-11C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-11C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-11C>G
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11381
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20607
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2318
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

19-3449001-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449001
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449001
    reference: chr 19
allele count: 1
allele frequency: 8.465536799688468e-6
allele num: 118126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-11C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-11C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-11C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-11C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-11C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-11C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-11C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-11C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7361
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1643
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2318
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP

19-3449002-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449002
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449002
    reference: chr 19
allele count: 1
allele frequency: 8.454371755634839e-6
allele num: 118282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-10C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-10C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-10C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-10C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-10C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-10C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-10C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-10C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12276
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3900
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

19-3449003-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449003
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449003
    reference: chr 19
allele count: 1
allele frequency: 8.441953130276222e-6
allele num: 118456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-9C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-9C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-9C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-9C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-9C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-9C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-9C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-9C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12280
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1679
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1517
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

19-3449006-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449006
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449006
    reference: chr 19
allele count: 7
allele frequency: 5.895332580976604e-5
allele num: 118738
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-6C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-6C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-6C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-6C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-6C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-6C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-6C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-6C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4292
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8460
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11440
  bin: 6.75e1
  variant carriers: 0
hgvs: c.959-6C>T
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum

19-3449009-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449009
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449009
    reference: chr 19
allele count: 2
allele frequency: 1.679966400671986e-5
allele num: 119050
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.860-3C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.163-3C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.860-3C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.932-3C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.932-3C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.959-3C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.959-3C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.959-3C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12288
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10717
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21301
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4564
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5671
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7357
  bin: 9.75e1
  variant carriers: 2
hgvs: c.959-3C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

19-3449015-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449015
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449015
    reference: chr 19
allele count: 1
allele frequency: 8.36456102783726e-6
allele num: 119552
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.962T>A
  hgvsp: ENSP00000342194.2:p.Ile321Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.863T>A
  hgvsp: ENSP00000465177.1:p.Ile288Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.962T>A
  hgvsp: ENSP00000466647.1:p.Ile321Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.935T>A
  hgvsp: ENSP00000465655.1:p.Ile312Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.863T>A
  hgvsp: ENSP00000301935.6:p.Ile288Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.962T>A
  hgvsp: ENSP00000396843.2:p.Ile321Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.166T>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.935T>A
  hgvsp: ENSP00000378543.2:p.Ile312Asn
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10720
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12287
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11575
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile321Asn
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-3449019-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449019
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449019
    reference: chr 19
allele count: 4
allele frequency: 3.335390157263646e-5
allele num: 119926
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.939G>A
  hgvsp: ENST00000395111.3:c.939G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.939G>A
  hgvsp: ENST00000589123.1:c.939G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.966G>A
  hgvsp: ENST00000590282.1:c.966G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.867G>A
  hgvsp: ENST00000586919.1:c.867G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.966G>A
  hgvsp: ENST00000341919.3:c.966G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.966G>A
  hgvsp: ENST00000443272.2:c.966G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.170G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.867G>A
  hgvsp: ENST00000346156.5:c.867G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10720
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5706
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3933
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7358
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4608
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser322Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

19-3449025-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449025
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449025
    reference: chr 19
allele count: 1
allele frequency: 8.30675172780436e-6
allele num: 120384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.945G>A
  hgvsp: ENST00000589123.1:c.945G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.873G>A
  hgvsp: ENST00000346156.5:c.873G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.873G>A
  hgvsp: ENST00000586919.1:c.873G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.945G>A
  hgvsp: ENST00000395111.3:c.945G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.972G>A
  hgvsp: ENST00000341919.3:c.972G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.972G>A
  hgvsp: ENST00000590282.1:c.972G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.972G>A
  hgvsp: ENST00000443272.2:c.972G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.176G>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10721
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11687
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro324Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

19-3449041-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449041
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449041
    reference: chr 19
allele count: 1
allele frequency: 8.285004142502071e-6
allele num: 120700
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.889A>T
  hgvsp: ENSP00000301935.6:p.Met297Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.988A>T
  hgvsp: ENSP00000466647.1:p.Met330Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.961A>T
  hgvsp: ENSP00000465655.1:p.Met321Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.988A>T
  hgvsp: ENSP00000396843.2:p.Met330Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.961A>T
  hgvsp: ENSP00000378543.2:p.Met321Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.192A>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.988A>T
  hgvsp: ENSP00000342194.2:p.Met330Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.889A>T
  hgvsp: ENSP00000465177.1:p.Met297Leu
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10724
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11742
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met330Leu
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum

19-3449042-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449042
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449042
    reference: chr 19
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.989T>C
  hgvsp: ENSP00000466647.1:p.Met330Thr
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.989T>C
  hgvsp: ENSP00000342194.2:p.Met330Thr
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.890T>C
  hgvsp: ENSP00000465177.1:p.Met297Thr
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.989T>C
  hgvsp: ENSP00000396843.2:p.Met330Thr
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.962T>C
  hgvsp: ENSP00000378543.2:p.Met321Thr
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.193T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.962T>C
  hgvsp: ENSP00000465655.1:p.Met321Thr
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.890T>C
  hgvsp: ENSP00000301935.6:p.Met297Thr
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10730
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4493
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8666
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3948
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1697
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22405
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11737
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met330Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

19-3449049-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449049
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449049
    reference: chr 19
allele count: 1
allele frequency: 8.285690612312537e-6
allele num: 120690
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.969G>C
  hgvsp: ENSP00000465655.1:p.Lys323Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.996G>C
  hgvsp: ENSP00000466647.1:p.Lys332Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.897G>C
  hgvsp: ENSP00000465177.1:p.Lys299Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.897G>C
  hgvsp: ENSP00000301935.6:p.Lys299Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.996G>C
  hgvsp: ENSP00000342194.2:p.Lys332Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.969G>C
  hgvsp: ENSP00000378543.2:p.Lys323Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.200G>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.996G>C
  hgvsp: ENSP00000396843.2:p.Lys332Asn
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10728
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12295
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4992
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4652
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3950
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Lys332Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

19-3449066-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449066
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449066
    reference: chr 19
allele count: 1
allele frequency: 8.307717869901138e-6
allele num: 120370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.986C>T
  hgvsp: ENSP00000465655.1:p.Pro329Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.217C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.914C>T
  hgvsp: ENSP00000301935.6:p.Pro305Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.914C>T
  hgvsp: ENSP00000465177.1:p.Pro305Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.986C>T
  hgvsp: ENSP00000378543.2:p.Pro329Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1013C>T
  hgvsp: ENSP00000466647.1:p.Pro338Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1013C>T
  hgvsp: ENSP00000342194.2:p.Pro338Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1013C>T
  hgvsp: ENSP00000396843.2:p.Pro338Leu
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9893
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11291
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19443
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5674
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7408
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Pro338Leu
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

19-3449067-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449067
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449067
    reference: chr 19
allele count: 3
allele frequency: 2.508403150554357e-5
allele num: 119598
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.915G>A
  hgvsp: ENST00000586919.1:c.915G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1014G>A
  hgvsp: ENST00000341919.3:c.1014G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.987G>A
  hgvsp: ENST00000395111.3:c.987G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.987G>A
  hgvsp: ENST00000589123.1:c.987G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.915G>A
  hgvsp: ENST00000346156.5:c.915G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1014G>A
  hgvsp: ENST00000590282.1:c.1014G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.218G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1014G>A
  hgvsp: ENST00000443272.2:c.1014G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11092
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6550
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2225
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro338Pro
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

19-3449068-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449068
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449068
    reference: chr 19
allele count: 19
allele frequency: 1.868276662274578e-4
allele num: 101698
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1015T>C
  hgvsp: ENSP00000396843.2:p.Ser339Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1015T>C
  hgvsp: ENSP00000466647.1:p.Ser339Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.988T>C
  hgvsp: ENSP00000378543.2:p.Ser330Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1015T>C
  hgvsp: ENSP00000342194.2:p.Ser339Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.916T>C
  hgvsp: ENSP00000301935.6:p.Ser306Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.219T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.988T>C
  hgvsp: ENSP00000465655.1:p.Ser330Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.916T>C
  hgvsp: ENSP00000465177.1:p.Ser306Pro
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4133
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6618
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11422
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9628
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1654
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2394
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1541
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser339Pro
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

19-3449068-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449068
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449069
    reference: chr 19
allele count: 2
allele frequency: 1.966607012920608e-5
allele num: 101698
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.994dupC
  hgvsp: ENSP00000465655.1:p.Gln332ProfsTer201
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1021dupC
  hgvsp: ENSP00000396843.2:p.Gln341ProfsTer201
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.922dupC
  hgvsp: ENSP00000301935.6:p.Gln308ProfsTer118
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.994dupC
  hgvsp: ENSP00000378543.2:p.Gln332ProfsTer118
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1021dupC
  hgvsp: ENSP00000466647.1:p.Gln341ProfsTer118
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.922dupC
  hgvsp: ENSP00000465177.1:p.Gln308ProfsTer?
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1021dupC
  hgvsp: ENSP00000342194.2:p.Gln341ProfsTer121
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.225dupC
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11422
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9628
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6618
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1752
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1817
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2394
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15839
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 1.25e1
  variant carriers: 1
hgvs: p.Gln341ProfsTer201
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-3449074-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449074
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449074
    reference: chr 19
allele count: 2
allele frequency: 1.665639522294585e-5
allele num: 120074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.922C>A
  hgvsp: ENSP00000465177.1:p.Gln308Lys
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.922C>A
  hgvsp: ENSP00000301935.6:p.Gln308Lys
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.994C>A
  hgvsp: ENSP00000378543.2:p.Gln332Lys
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.994C>A
  hgvsp: ENSP00000465655.1:p.Gln332Lys
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1021C>A
  hgvsp: ENSP00000342194.2:p.Gln341Lys
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1021C>A
  hgvsp: ENSP00000466647.1:p.Gln341Lys
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.225C>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1021C>A
  hgvsp: ENSP00000396843.2:p.Gln341Lys
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4729
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6576
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8008
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8703
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2539
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1383
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3686
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Gln341Lys
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/19-3449078-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449078
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449078
    reference: chr 19
allele count: 17
allele frequency: 1.540357362908195e-4
allele num: 110364
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1025A>C
  hgvsp: ENSP00000396843.2:p.Asp342Ala
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.998A>C
  hgvsp: ENSP00000465655.1:p.Asp333Ala
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.926A>C
  hgvsp: ENSP00000465177.1:p.Asp309Ala
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1025A>C
  hgvsp: ENSP00000342194.2:p.Asp342Ala
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.926A>C
  hgvsp: ENSP00000301935.6:p.Asp309Ala
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1025A>C
  hgvsp: ENSP00000466647.1:p.Asp342Ala
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.229A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.998A>C
  hgvsp: ENSP00000378543.2:p.Asp333Ala
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 10956
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12732
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10850
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8083
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3008
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3751
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2368
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 4367
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3125
  bin: 7.75e1
  variant carriers: 2
hgvs: p.Asp342Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-3449080-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449080
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449080
    reference: chr 19
allele count: 9
allele frequency: 7.755678880424667e-5
allele num: 116044
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1000T>C
  hgvsp: ENSP00000465655.1:p.Ser334Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.231T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.928T>C
  hgvsp: ENSP00000465177.1:p.Ser310Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1027T>C
  hgvsp: ENSP00000342194.2:p.Ser343Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1000T>C
  hgvsp: ENSP00000378543.2:p.Ser334Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.928T>C
  hgvsp: ENSP00000301935.6:p.Ser310Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1027T>C
  hgvsp: ENSP00000466647.1:p.Ser343Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1027T>C
  hgvsp: ENSP00000396843.2:p.Ser343Pro
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 11378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8614
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12348
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10399
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5403
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1795
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3494
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2360
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4628
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser343Pro
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD

19-3449082-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449082
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449082
    reference: chr 19
allele count: 26
allele frequency: 5.875175125412392e-4
allele num: 44254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1002T>A
  hgvsp: ENST00000395111.3:c.1002T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1002T>A
  hgvsp: ENST00000589123.1:c.1002T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.930T>A
  hgvsp: ENST00000586919.1:c.930T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.233T>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1029T>A
  hgvsp: ENST00000341919.3:c.1029T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1029T>A
  hgvsp: ENST00000590282.1:c.1029T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.930T>A
  hgvsp: ENST00000346156.5:c.930T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1029T>A
  hgvsp: ENST00000443272.2:c.1029T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8583
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9579
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12645
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11461
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5696
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2037
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32323
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser343Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD

19-3449082-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449082
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449082
    reference: chr 19
allele count: 652
allele frequency: 1.473313146834184e-2
allele num: 44254
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1029T>C
  hgvsp: ENST00000590282.1:c.1029T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1029T>C
  hgvsp: ENST00000341919.3:c.1029T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1002T>C
  hgvsp: ENST00000589123.1:c.1002T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1029T>C
  hgvsp: ENST00000443272.2:c.1029T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.930T>C
  hgvsp: ENST00000586919.1:c.930T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1002T>C
  hgvsp: ENST00000395111.3:c.1002T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.233T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.930T>C
  hgvsp: ENST00000346156.5:c.930T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 9579
  bin: 2.25e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 5.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 8583
  bin: 3.75e1
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 11461
  bin: 3.25e1
  variant carriers: 205
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 1.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 5696
  bin: 4.25e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 12645
  bin: 2.75e1
  variant carriers: 186
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 4.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2124
  bin: 7.5e0
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 8.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 3.75e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 1887
  bin: 1.25e1
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 7.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 4.75e1
  variant carriers: 59
hgvs: p.Ser343Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

19-3449086-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449086
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449086
    reference: chr 19
allele count: 1
allele frequency: 8.317391665973551e-6
allele num: 120230
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1006C>T
  hgvsp: ENSP00000378543.2:p.Arg336Cys
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1033C>T
  hgvsp: ENSP00000342194.2:p.Arg345Cys
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1033C>T
  hgvsp: ENSP00000466647.1:p.Arg345Cys
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1006C>T
  hgvsp: ENSP00000465655.1:p.Arg336Cys
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.934C>T
  hgvsp: ENSP00000465177.1:p.Arg312Cys
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.237C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1033C>T
  hgvsp: ENSP00000396843.2:p.Arg345Cys
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.934C>T
  hgvsp: ENSP00000301935.6:p.Arg312Cys
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10102
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg345Cys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

19-3449087-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449087
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449087
    reference: chr 19
allele count: 14
allele frequency: 1.164492946499867e-4
allele num: 120224
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1007G>A
  hgvsp: ENSP00000378543.2:p.Arg336His
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1034G>A
  hgvsp: ENSP00000466647.1:p.Arg345His
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1034G>A
  hgvsp: ENSP00000396843.2:p.Arg345His
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.935G>A
  hgvsp: ENSP00000301935.6:p.Arg312His
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.935G>A
  hgvsp: ENSP00000465177.1:p.Arg312His
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1007G>A
  hgvsp: ENSP00000465655.1:p.Arg336His
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1034G>A
  hgvsp: ENSP00000342194.2:p.Arg345His
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.238G>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9771
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg345His
num of homozygotes: 1
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

19-3449089-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449089
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449089
    reference: chr 19
allele count: 1
allele frequency: 8.317114959162966e-6
allele num: 120234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.937C>G
  hgvsp: ENSP00000301935.6:p.Leu313Val
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.937C>G
  hgvsp: ENSP00000465177.1:p.Leu313Val
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1009C>G
  hgvsp: ENSP00000465655.1:p.Leu337Val
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1009C>G
  hgvsp: ENSP00000378543.2:p.Leu337Val
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1036C>G
  hgvsp: ENSP00000466647.1:p.Leu346Val
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1036C>G
  hgvsp: ENSP00000342194.2:p.Leu346Val
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1036C>G
  hgvsp: ENSP00000396843.2:p.Leu346Val
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.240C>G
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41591
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2333
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu346Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

19-3449091-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449091
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449091
    reference: chr 19
allele count: 1
allele frequency: 8.317806760713336e-6
allele num: 120224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.939C>T
  hgvsp: ENST00000346156.5:c.939C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1038C>T
  hgvsp: ENST00000590282.1:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.242C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1011C>T
  hgvsp: ENST00000589123.1:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1011C>T
  hgvsp: ENST00000395111.3:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1038C>T
  hgvsp: ENST00000443272.2:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1038C>T
  hgvsp: ENST00000341919.3:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.939C>T
  hgvsp: ENST00000586919.1:c.939C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu346Leu
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum

19-3449092-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449092
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449092
    reference: chr 19
allele count: 1
allele frequency: 8.319052293562717e-6
allele num: 120206
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1012T>C
  hgvsp: ENSP00000465655.1:p.Ser338Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.940T>C
  hgvsp: ENSP00000301935.6:p.Ser314Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1039T>C
  hgvsp: ENSP00000466647.1:p.Ser347Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1012T>C
  hgvsp: ENSP00000378543.2:p.Ser338Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1039T>C
  hgvsp: ENSP00000396843.2:p.Ser347Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.243T>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1039T>C
  hgvsp: ENSP00000342194.2:p.Ser347Pro
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.940T>C
  hgvsp: ENSP00000465177.1:p.Ser314Pro
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3097
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2323
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser347Pro
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

19-3449112-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449112
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449112
    reference: chr 19
allele count: 1
allele frequency: 8.365680631776201e-6
allele num: 119536
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1059C>G
  hgvsp: ENSP00000466647.1:p.His353Gln
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.960C>G
  hgvsp: ENSP00000465177.1:p.His320Gln
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.960C>G
  hgvsp: ENSP00000301935.6:p.His320Gln
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1059C>G
  hgvsp: ENSP00000396843.2:p.His353Gln
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1032C>G
  hgvsp: ENSP00000378543.2:p.His344Gln
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1059C>G
  hgvsp: ENSP00000342194.2:p.His353Gln
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1032C>G
  hgvsp: ENSP00000465655.1:p.His344Gln
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.263C>G
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15332
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9876
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His353Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP

19-3449115-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449115
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449115
    reference: chr 19
allele count: 9
allele frequency: 7.562643900307548e-5
allele num: 119006
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1062G>A
  hgvsp: ENST00000590282.1:c.1062G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.963G>A
  hgvsp: ENST00000346156.5:c.963G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.963G>A
  hgvsp: ENST00000586919.1:c.963G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1035G>A
  hgvsp: ENST00000395111.3:c.1035G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1062G>A
  hgvsp: ENST00000443272.2:c.1062G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1062G>A
  hgvsp: ENST00000341919.3:c.1062G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1035G>A
  hgvsp: ENST00000589123.1:c.1035G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.266G>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14972
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2928
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27705
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg354Arg
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

19-3449118-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449118
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449118
    reference: chr 19
allele count: 1
allele frequency: 8.416233230655287e-6
allele num: 118818
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1065C>G
  hgvsp: ENST00000443272.2:c.1065C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.966C>G
  hgvsp: ENST00000586919.1:c.966C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1038C>G
  hgvsp: ENST00000589123.1:c.1038C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1065C>G
  hgvsp: ENST00000590282.1:c.1065C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.966C>G
  hgvsp: ENST00000346156.5:c.966C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.269C>G
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1065C>G
  hgvsp: ENST00000341919.3:c.1065C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1038C>G
  hgvsp: ENST00000395111.3:c.1038C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14780
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2389
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro355Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

19-3449118-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449118
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449118
    reference: chr 19
allele count: 3
allele frequency: 2.524869969196586e-5
allele num: 118818
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1065C>T
  hgvsp: ENST00000443272.2:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1038C>T
  hgvsp: ENST00000395111.3:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.966C>T
  hgvsp: ENST00000346156.5:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.269C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1065C>T
  hgvsp: ENST00000341919.3:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1038C>T
  hgvsp: ENST00000589123.1:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1065C>T
  hgvsp: ENST00000590282.1:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.966C>T
  hgvsp: ENST00000586919.1:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14780
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2389
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2245
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro355Pro
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

19-3449119-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449119
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449119
    reference: chr 19
allele count: 3
allele frequency: 2.525592672413793e-5
allele num: 118784
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.967G>A
  hgvsp: ENSP00000301935.6:p.Val323Ile
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.967G>A
  hgvsp: ENSP00000465177.1:p.Val323Ile
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.270G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1066G>A
  hgvsp: ENSP00000466647.1:p.Val356Ile
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1039G>A
  hgvsp: ENSP00000465655.1:p.Val347Ile
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1039G>A
  hgvsp: ENSP00000378543.2:p.Val347Ile
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1066G>A
  hgvsp: ENSP00000396843.2:p.Val356Ile
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1066G>A
  hgvsp: ENSP00000342194.2:p.Val356Ile
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14726
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2076
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val356Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-3449122-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449122
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449122
    reference: chr 19
allele count: 1
allele frequency: 8.432983083435934e-6
allele num: 118582
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1069A>C
  hgvsp: ENSP00000466647.1:p.Ile357Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.273A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.970A>C
  hgvsp: ENSP00000301935.6:p.Ile324Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1069A>C
  hgvsp: ENSP00000396843.2:p.Ile357Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.970A>C
  hgvsp: ENSP00000465177.1:p.Ile324Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1042A>C
  hgvsp: ENSP00000378543.2:p.Ile348Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1042A>C
  hgvsp: ENSP00000465655.1:p.Ile348Leu
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1069A>C
  hgvsp: ENSP00000342194.2:p.Ile357Leu
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10098
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40204
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile357Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

19-3449124-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449124
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449124
    reference: chr 19
allele count: 47
allele frequency: 3.967717971229824e-4
allele num: 118456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.972C>T
  hgvsp: ENST00000586919.1:c.972C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.275C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1044C>T
  hgvsp: ENST00000589123.1:c.1044C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1071C>T
  hgvsp: ENST00000590282.1:c.1071C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.972C>T
  hgvsp: ENST00000346156.5:c.972C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1071C>T
  hgvsp: ENST00000443272.2:c.1071C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1071C>T
  hgvsp: ENST00000341919.3:c.1071C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1044C>T
  hgvsp: ENST00000395111.3:c.1044C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10124
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 14396
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27346
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2886
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile357Ile
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

19-3449127-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449127
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449127
    reference: chr 19
allele count: 2
allele frequency: 1.69741822687692e-5
allele num: 117826
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.278C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1047C>T
  hgvsp: ENST00000395111.3:c.1047C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.975C>T
  hgvsp: ENST00000346156.5:c.975C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.975C>T
  hgvsp: ENST00000586919.1:c.975C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1047C>T
  hgvsp: ENST00000589123.1:c.1047C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1074C>T
  hgvsp: ENST00000341919.3:c.1074C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1074C>T
  hgvsp: ENST00000590282.1:c.1074C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1074C>T
  hgvsp: ENST00000443272.2:c.1074C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3609
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala358Ala
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

19-3449135-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449135
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449135
    reference: chr 19
allele count: 1
allele frequency: 8.67362869930264e-6
allele num: 115292
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1055G>A
  hgvsp: ENSP00000378543.2:p.Ser352Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.286G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.983G>A
  hgvsp: ENSP00000465177.1:p.Ser328Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1082G>A
  hgvsp: ENSP00000396843.2:p.Ser361Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1082G>A
  hgvsp: ENSP00000466647.1:p.Ser361Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1082G>A
  hgvsp: ENSP00000342194.2:p.Ser361Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.983G>A
  hgvsp: ENSP00000301935.6:p.Ser328Asn
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1055G>A
  hgvsp: ENSP00000465655.1:p.Ser352Asn
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9726
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35676
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser361Asn
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

19-3449136-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449136
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449136
    reference: chr 19
allele count: 11
allele frequency: 9.561392834170679e-5
allele num: 115046
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.287C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.984C>T
  hgvsp: ENST00000346156.5:c.984C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1056C>T
  hgvsp: ENST00000395111.3:c.1056C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1083C>T
  hgvsp: ENST00000341919.3:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1083C>T
  hgvsp: ENST00000443272.2:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1083C>T
  hgvsp: ENST00000590282.1:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.984C>T
  hgvsp: ENST00000586919.1:c.984C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1056C>T
  hgvsp: ENST00000589123.1:c.1056C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5552
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24328
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12279
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1676
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1083C>T
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-3449140-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449140
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449140
    reference: chr 19
allele count: 1
allele frequency: 8.834702712253733e-6
allele num: 113190
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1084+3A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.288+3A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1084+3A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1057+3A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1057+3A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.985+3A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.985+3A>C
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1084+3A>C
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11042
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7385
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1084+3A>C
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

19-3449142-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449142
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449142
    reference: chr 19
allele count: 1
allele frequency: 8.933357155619082e-6
allele num: 111940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1057+5G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.985+5G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1084+5G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1084+5G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.288+5G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1084+5G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.985+5G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1057+5G>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1084+5G>A
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-3449143-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449143
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449143
    reference: chr 19
allele count: 1
allele frequency: 8.971023593792052e-6
allele num: 111470
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1084+6C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.985+6C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.288+6C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1057+6C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1084+6C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1084+6C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.985+6C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1057+6C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8848
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29720
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1084+6C>T
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

19-3449144-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449144
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449144
    reference: chr 19
allele count: 4
allele frequency: 3.593244699964068e-5
allele num: 111320
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.985+7G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1084+7G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.288+7G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.985+7G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1084+7G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1057+7G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1057+7G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1084+7G>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9956
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9749
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8904
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21017
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2159
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 4.25e1
  variant carriers: 0
hgvs: c.1084+7G>A
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

19-3449148-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449148
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449148
    reference: chr 19
allele count: 251
allele frequency: 2.296768053877969e-3
allele num: 109284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.985+11C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1057+11C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1084+11C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1057+11C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.985+11C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1084+11C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.288+11C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1084+11C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18847
  bin: 2.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 9241
  bin: 2.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 11144
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 8885
  bin: 3.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 1.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4836
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 3.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 9.75e1
  variant carriers: 243
genotype quality: GenotypeQuality
  all individuals: 6531
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2776
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 5
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

19-3449149-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449149
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449149
    reference: chr 19
allele count: 5
allele frequency: 4.598885230220195e-5
allele num: 108722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.288+12G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.985+12G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1084+12G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1057+12G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1084+12G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1084+12G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1057+12G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.985+12G>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8604
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9054
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18321
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11869
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2907
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6460
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26267
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12869
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

19-3449152-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449152
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449152
    reference: chr 19
allele count: 3
allele frequency: 2.793296089385475e-5
allele num: 107400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1084+15C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1084+15C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1057+15C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1057+15C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.985+15C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.288+15C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.985+15C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1084+15C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16625
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7845
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13637
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8694
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3346
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1406
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23920
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5796
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14323
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ

19-3449159-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449159
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449159
    reference: chr 19
allele count: 9
allele frequency: 8.813851457223441e-5
allele num: 102112
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1084+22C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1084+22C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1057+22C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1057+22C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1084+22C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.985+22C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.985+22C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.288+22C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6167
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4500
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20294
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10127
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8703
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3325
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

19-3449160-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449160
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449160
    reference: chr 19
allele count: 5
allele frequency: 4.887203346756852e-5
allele num: 102308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.985+23G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1084+23G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1084+23G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1057+23G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.288+23G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1057+23G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.985+23G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1084+23G>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10194
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20390
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6899
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2446
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5288
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15548
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18373
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3286
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

19-3449162-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449162
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449162
    reference: chr 19
allele count: 1
allele frequency: 9.754574895626049e-6
allele num: 102516
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.288+25G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1084+25G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.985+25G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1057+25G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1084+25G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1084+25G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1057+25G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.985+25G>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10227
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20496
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7013
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3232
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2445
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6503
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1840
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD

19-3449164-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449164
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449163
    reference: chr 19
allele count: 1
allele frequency: 9.938382031405287e-6
allele num: 100620
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1057+31delG
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.985+31delG
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1057+31delG
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.288+31delG
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1084+31delG
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1084+31delG
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.985+31delG
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1084+31delG
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8039
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10546
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7433
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4047
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18774
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: AG
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

19-3449165-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449165
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449165
    reference: chr 19
allele count: 1
allele frequency: 1.007313093055584e-5
allele num: 99274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1084+28G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.985+28G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1084+28G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1057+28G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.985+28G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1057+28G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1084+28G>A
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.288+28G>A
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11661
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7835
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7070
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18417
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1128
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-3449169-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3449169
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 3449169
    reference: chr 19
allele count: 1
allele frequency: 1.023960679909891e-5
allele num: 97660
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000342194
  ensembl transcript: ENST00000341919
  gene symbol: NFIC
  hgvsc: ENST00000341919.3:c.1084+32C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000396843
  ensembl transcript: ENST00000443272
  gene symbol: NFIC
  hgvsc: ENST00000443272.2:c.1084+32C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000301935
  ensembl transcript: ENST00000346156
  gene symbol: NFIC
  hgvsc: ENST00000346156.5:c.985+32C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000466647
  ensembl transcript: ENST00000590282
  gene symbol: NFIC
  hgvsc: ENST00000590282.1:c.1084+32C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465177
  ensembl transcript: ENST00000586919
  gene symbol: NFIC
  hgvsc: ENST00000586919.1:c.985+32C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl transcript: ENST00000589537
  gene symbol: NFIC
  hgvsc: ENST00000589537.1:n.288+32C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000378543
  ensembl transcript: ENST00000395111
  gene symbol: NFIC
  hgvsc: ENST00000395111.3:c.1057+32C>T
  variant of: http://identifiers.org/hgnc/7786
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141905
  ensembl protein: ENSP00000465655
  ensembl transcript: ENST00000589123
  gene symbol: NFIC
  hgvsc: ENST00000589123.1:c.1057+32C>T
  variant of: http://identifiers.org/hgnc/7786
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 2472
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 977
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9038
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3355
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9528
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4034
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2084
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.399923202457521e-5
allele num: 41668
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6050
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.054e1

DP
type: SiteQuality
SIO_000300: 7.44059e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.103e0

FS
type: SiteQuality
SIO_000300: 9.115e0

VQSLOD
type: SiteQuality
SIO_000300: -1.033e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.85e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.211e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.24e-1

GenotypeQuality
all individuals: 5103
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3355
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 977
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4034
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1085
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6050
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9424
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.876172607879925e-4
allele num: 5330
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.85e-2

QD
type: SiteQuality
SIO_000300: 1.054e1

FS
type: SiteQuality
SIO_000300: 9.115e0

VQSLOD
type: SiteQuality
SIO_000300: -1.033e0

DP
type: SiteQuality
SIO_000300: 7.44059e5

MQRankSum
type: SiteQuality
SIO_000300: -1.211e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.103e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 9388
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3131
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 34
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.716696095742594e-4
allele num: 40776
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.730702665282105e-4
allele num: 5778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1978
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9110
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

DP
type: SiteQuality
SIO_000300: 7.19643e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.017e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e-1

FS
type: SiteQuality
SIO_000300: 3.433e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.29e-1

GenotypeQuality
all individuals: 164
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9302
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4086
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5503
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15275
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5148
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1928
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.484101748807631e-5
allele num: 40256
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQ
type: SiteQuality
SIO_000300: 5.878e1

DP
type: SiteQuality
SIO_000300: 7.13903e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.56e-2

QD
type: SiteQuality
SIO_000300: 1.396e1

VQSLOD
type: SiteQuality
SIO_000300: -9.072e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.755e0

GenotypeQuality
all individuals: 9244
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5493
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4505
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variant carriers: 0

GenotypeQuality
all individuals: 770
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variant carriers: 0

GenotypeQuality
all individuals: 14654
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variant carriers: 0

GenotypeQuality
all individuals: 3876
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
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variant carriers: 0

GenotypeQuality
all individuals: 991
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2215
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39884
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.137656427758817e-4
allele num: 8790
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.41e-2

FS
type: SiteQuality
SIO_000300: 7.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

DP
type: SiteQuality
SIO_000300: 7.12545e5

QD
type: SiteQuality
SIO_000300: 2.13e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

GenotypeQuality
all individuals: 191
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5736
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4115
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5570
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4067
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4038
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8984
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4237
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5068
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1844
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3246
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.13e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.843e1

DP
type: SiteQuality
SIO_000300: 7.10126e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e-1

GenotypeQuality
all individuals: 8866
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1236
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5536
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4042
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2605
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4249
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
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variant carriers: 0

GenotypeQuality
all individuals: 12676
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 6163
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 420
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variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5038
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3210
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.164415463437354e-4
allele num: 8588
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.10272e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.338e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 1.0671e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1693
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4249
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1236
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2605
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5536
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4080
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6163
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3833
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 7.25e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.542971763616726e-4
allele num: 38886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-2

DP
type: SiteQuality
SIO_000300: 7.10272e5

FS
type: SiteQuality
SIO_000300: 1.0671e1

QD
type: SiteQuality
SIO_000300: 1.338e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5659
bin: 2.5e0
variant carriers: 111

GenotypeQuality
all individuals: 3925
bin: 1.75e1
variant carriers: 2031

GenotypeQuality
all individuals: 2384
bin: 2.75e1
variant carriers: 1060

GenotypeQuality
all individuals: 2391
bin: 1.25e1
variant carriers: 1056

GenotypeQuality
all individuals: 1020
bin: 6.75e1
variant carriers: 800

GenotypeQuality
all individuals: 3282
bin: 3.25e1
variant carriers: 1427

GenotypeQuality
all individuals: 954
bin: 5.75e1
variant carriers: 799

GenotypeQuality
all individuals: 13736
bin: 9.75e1
variant carriers: 13717

GenotypeQuality
all individuals: 957
bin: 7.75e1
variant carriers: 894

GenotypeQuality
all individuals: 1327
bin: 4.25e1
variant carriers: 719

GenotypeQuality
all individuals: 806
bin: 8.75e1
variant carriers: 799

GenotypeQuality
all individuals: 769
bin: 7.25e1
variant carriers: 700

African
type: Population
allele count: 3268
allele frequency: 5.970040189989039e-1
allele num: 5474
num of homozygotes: 960

South Asian
type: Population
allele count: 4073
allele frequency: 4.682685674867786e-1
allele num: 8698
num of homozygotes: 953

European (Finnish)
type: Population
allele count: 550
allele frequency: 3.052164261931188e-1
allele num: 1802
num of homozygotes: 72

East Asian
type: Population
allele count: 3869
allele frequency: 7.568466353677621e-1
allele num: 5112
num of homozygotes: 1446

Other
type: Population
allele count: 148
allele frequency: 4.0e-1
allele num: 370
num of homozygotes: 23

Latino
type: Population
allele count: 2097
allele frequency: 6.050201961915753e-1
allele num: 3466
num of homozygotes: 611

European (Non-Finnish)
type: Population
allele count: 13318
allele frequency: 3.466784673052895e-1
allele num: 38416
num of homozygotes: 2149

MQRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.391e-1

DP
type: SiteQuality
SIO_000300: 7.20551e5

VQSLOD
type: SiteQuality
SIO_000300: 2.83e0

QD
type: SiteQuality
SIO_000300: 1.774e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.601e0

GenotypeQuality
all individuals: 246
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8267
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2055
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8608
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5884
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1877
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.368551028077522e-5
allele num: 37254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4812
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3010
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.411e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.43e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

DP
type: SiteQuality
SIO_000300: 6.98415e5

QD
type: SiteQuality
SIO_000300: 9.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

GenotypeQuality
all individuals: 3875
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11074
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7458
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4449
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1712
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18007
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5596
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2316
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1681
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540594669542443e-5
allele num: 64910
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.23e0

FS
type: SiteQuality
SIO_000300: 1.176e0

DP
type: SiteQuality
SIO_000300: 2.383441e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.584e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.044e0

MQRankSum
type: SiteQuality
SIO_000300: 3.25e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 218
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7464
bin: 9.75e1
variant carriers: 21

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5593
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11093
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1679
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4451
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 21
allele frequency: 1.629928593604471e-3
allele num: 12884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64944
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.94e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.563e0

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.68e-1

FS
type: SiteQuality
SIO_000300: 3.55e0

QD
type: SiteQuality
SIO_000300: 1.194e1

DP
type: SiteQuality
SIO_000300: 2.385685e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

GenotypeQuality
all individuals: 321
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3878
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5592
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18363
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7447
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2313
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64936
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.747133560582585e-5
allele num: 12908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.462e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.575e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.8e-1

DP
type: SiteQuality
SIO_000300: 2.384935e6

QD
type: SiteQuality
SIO_000300: 1.793e1

GenotypeQuality
all individuals: 11133
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5591
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2231
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3877
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7394
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 601
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18572
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64986
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.717240314863405e-5
allele num: 12958
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.68e0

MQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.447e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.863e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.39e-1

DP
type: SiteQuality
SIO_000300: 2.386552e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.708e0

GenotypeQuality
all individuals: 1672
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4475
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5591
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2288
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18877
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7392
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 11174
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.511030522816561e-4
allele num: 13236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65108
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.319647413593134e-4
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.31e-1

MQ
type: SiteQuality
SIO_000300: 5.908e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.496e0

MQRankSum
type: SiteQuality
SIO_000300: 3.25e-1

QD
type: SiteQuality
SIO_000300: 1.161e1

DP
type: SiteQuality
SIO_000300: 2.391968e6

VQSLOD
type: SiteQuality
SIO_000300: 4.15e-1

GenotypeQuality
all individuals: 247
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7407
bin: 9.75e1
variant carriers: 37

GenotypeQuality
all individuals: 99
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2278
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11184
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4475
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 39
allele frequency: 2.932771845390284e-3
allele num: 13298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65130
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.258e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.927e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.45e-1

DP
type: SiteQuality
SIO_000300: 2.392259e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

MQ
type: SiteQuality
SIO_000300: 5.912e1

GenotypeQuality
all individuals: 1677
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19163
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2262
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7373
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 150
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65162
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.903e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e0

FS
type: SiteQuality
SIO_000300: 1.0619e1

MQ
type: SiteQuality
SIO_000300: 6.018e1

VQSLOD
type: SiteQuality
SIO_000300: 6.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.491e0

DP
type: SiteQuality
SIO_000300: 2.392405e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

GenotypeQuality
all individuals: 231
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7373
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 11203
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2249
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3879
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.671770951606469e-5
allele num: 65174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.35e-1

DP
type: SiteQuality
SIO_000300: 2.393409e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.731e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.95e-1

FS
type: SiteQuality
SIO_000300: 5.24e-1

QD
type: SiteQuality
SIO_000300: 1.106e1

MQ
type: SiteQuality
SIO_000300: 5.945e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

GenotypeQuality
all individuals: 642
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7373
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4485
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1676
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19153
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3879
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534354190321294e-5
allele num: 65174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.106e1

MQRankSum
type: SiteQuality
SIO_000300: 3.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.731e0

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

FS
type: SiteQuality
SIO_000300: 5.24e-1

DP
type: SiteQuality
SIO_000300: 2.393409e6

GenotypeQuality
all individuals: 3882
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 19638
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GenotypeQuality
all individuals: 11238
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531440472908818e-5
allele num: 65298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.59920291110726e-4
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13696
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.155e1

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

FS
type: SiteQuality
SIO_000300: 1.745e0

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.49e-1

DP
type: SiteQuality
SIO_000300: 2.400584e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.73e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

GenotypeQuality
all individuals: 2317
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.900792883388126e-4
allele num: 10342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.590525156077855e-5
allele num: 65352
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.0e-2

QD
type: SiteQuality
SIO_000300: 1.311e1

FS
type: SiteQuality
SIO_000300: 1.736e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.77e-1

MQ
type: SiteQuality
SIO_000300: 5.92e1

DP
type: SiteQuality
SIO_000300: 2.403452e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7361
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528397627926881e-5
allele num: 65428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14050
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.406404e6

MQRankSum
type: SiteQuality
SIO_000300: -3.18e-1

FS
type: SiteQuality
SIO_000300: 3.8624e1

QD
type: SiteQuality
SIO_000300: 2.629e1

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -7.707e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.629999999999999e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524390243902439e-5
allele num: 65600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.51e-1

DP
type: SiteQuality
SIO_000300: 2.415357e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.48e-1

FS
type: SiteQuality
SIO_000300: 5.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.39e-1

MQ
type: SiteQuality
SIO_000300: 5.92e1

QD
type: SiteQuality
SIO_000300: 1.189e1

GenotypeQuality
all individuals: 3894
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5644
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variant carriers: 0

GenotypeQuality
all individuals: 20607
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524390243902439e-5
allele num: 65600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

FS
type: SiteQuality
SIO_000300: 5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.51e-1

QD
type: SiteQuality
SIO_000300: 1.189e1

MQ
type: SiteQuality
SIO_000300: 5.92e1

DP
type: SiteQuality
SIO_000300: 2.415357e6

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11399
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 20721
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4549
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variant carriers: 0

GenotypeQuality
all individuals: 5645
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.839945280437756e-5
allele num: 14620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: -2.79e-1

FS
type: SiteQuality
SIO_000300: 1.213e0

DP
type: SiteQuality
SIO_000300: 2.416848e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.06e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.426e0

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.272e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 315
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522162688748173e-5
allele num: 65696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.418379e6

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.036e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.43e-1

FS
type: SiteQuality
SIO_000300: 1.066e0

VQSLOD
type: SiteQuality
SIO_000300: -1.574e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5657
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.689803028272812e-4
allele num: 14926
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.258e0

MQRankSum
type: SiteQuality
SIO_000300: 5.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.916e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.409999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.202e1

DP
type: SiteQuality
SIO_000300: 2.422116e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-2

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 255
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 125
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GenotypeQuality
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GenotypeQuality
all individuals: 3909
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GenotypeQuality
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GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65836
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15154
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.18e-1

QD
type: SiteQuality
SIO_000300: 1.26e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.569e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.28e-1

FS
type: SiteQuality
SIO_000300: 5.4e-1

DP
type: SiteQuality
SIO_000300: 2.4264e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4596
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1684
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.449116471043467e-5
allele num: 15506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65974
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.55e0

DP
type: SiteQuality
SIO_000300: 2.432762e6

VQSLOD
type: SiteQuality
SIO_000300: -2.268e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.036e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.41e-1

MQ
type: SiteQuality
SIO_000300: 5.766e1

GenotypeQuality
all individuals: 21970
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11640
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.026542780182198e-5
allele num: 66082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.343567622430856e-5
allele num: 15764
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.232e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.171e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

DP
type: SiteQuality
SIO_000300: 2.438313e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

GenotypeQuality
all individuals: 5743
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 585
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variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510345869204048e-5
allele num: 66210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16084
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.729e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.96e1

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.593e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.648e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.79e-1

DP
type: SiteQuality
SIO_000300: 2.443984e6

QD
type: SiteQuality
SIO_000300: 1.681e1

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22436
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66302
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.446896e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.071e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e0

MQRankSum
type: SiteQuality
SIO_000300: 2.52e-1

MQ
type: SiteQuality
SIO_000300: 5.849e1

FS
type: SiteQuality
SIO_000300: 8.070000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.218e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e0

GenotypeQuality
all individuals: 479
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
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GenotypeQuality
all individuals: 7334
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 95
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variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.13195977434388e-5
allele num: 16308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.48e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.04e-1

FS
type: SiteQuality
SIO_000300: 3.522e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.932e1

DP
type: SiteQuality
SIO_000300: 2.446854e6

QD
type: SiteQuality
SIO_000300: 1.605e1

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5761
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.124448799608035e-5
allele num: 16328
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

DP
type: SiteQuality
SIO_000300: 2.444973e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.366e1

MQ
type: SiteQuality
SIO_000300: 5.878e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.71e-1

FS
type: SiteQuality
SIO_000300: 4.432e0

VQSLOD
type: SiteQuality
SIO_000300: -5.007e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66014
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.680542110358181e-5
allele num: 10330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.206e1

MQ
type: SiteQuality
SIO_000300: 5.907e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.92e-1

FS
type: SiteQuality
SIO_000300: 7.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-2

DP
type: SiteQuality
SIO_000300: 2.384026e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.042380358392406e-5
allele num: 65738
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6182
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 6.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

DP
type: SiteQuality
SIO_000300: 2.358128e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

FS
type: SiteQuality
SIO_000300: 7.426e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.268e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 2

GenotypeQuality
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bin: 1.75e1
variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1817
bin: 9.75e1
variant carriers: 6

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3550
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GenotypeQuality
all individuals: 2025
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9154
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.137665669089354e-4
allele num: 14034
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 1.397298556124825e-3
allele num: 4294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.062280882656218e-4
allele num: 9698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.415478254715312e-4
allele num: 56518
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: -4.794e0

MQRankSum
type: SiteQuality
SIO_000300: 2.74e-1

FS
type: SiteQuality
SIO_000300: 5.4559e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.292e0

QD
type: SiteQuality
SIO_000300: 4.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.95e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.129999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.348076e6

GenotypeQuality
all individuals: 1735
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6552
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1541
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1654
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1798
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3212
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1798
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8121
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3550
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2160
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2025
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9154
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.031140441328109e-4
allele num: 9698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.76934781839414e-5
allele num: 56518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7252
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.794e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.129999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.292e0

FS
type: SiteQuality
SIO_000300: 5.4559e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.95e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.74e-1

DP
type: SiteQuality
SIO_000300: 2.348076e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.01e-1

GenotypeQuality
all individuals: 1297
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2367
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4533
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variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1616
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1791
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variant carriers: 0

GenotypeQuality
all individuals: 19239
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5321
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10747
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.708737864077671e-5
allele num: 10300
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65808
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.678e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e0

FS
type: SiteQuality
SIO_000300: 1.114e0

DP
type: SiteQuality
SIO_000300: 2.11937e6

GenotypeQuality
all individuals: 6470
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13451
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2514
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2781
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1827
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4132
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 935
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 868
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2759
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 894
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1973
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 906
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2482
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 8.36470096194061e-4
allele num: 4782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.024590163934426e-4
allele num: 9760
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.878992859827133e-4
allele num: 10644
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.231527093596059e-4
allele num: 8120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.603493247928155e-5
allele num: 60574
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.186743148502231e-4
allele num: 15690
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.25e-2

DP
type: SiteQuality
SIO_000300: 1.922711e6

MQ
type: SiteQuality
SIO_000300: 5.859e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.687e0

QD
type: SiteQuality
SIO_000300: 1.41e0

FS
type: SiteQuality
SIO_000300: 7.9964e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.007e1

GenotypeQuality
all individuals: 4048
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2925
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1872
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5364
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4896
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2968
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4464
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2739
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12013
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2754
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 981
bin: 9.25e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 1.012965964343598e-4
allele num: 9872
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.983111749910169e-5
allele num: 11132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.874759819825495e-5
allele num: 63494
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.179523472517103e-4
allele num: 8478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.680672268907563e-4
allele num: 5950
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.311e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.584e1

MQRankSum
type: SiteQuality
SIO_000300: 2.37e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

FS
type: SiteQuality
SIO_000300: 5.6564e1

DP
type: SiteQuality
SIO_000300: 1.933693e6

QD
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
all individuals: 1887
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1397
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2100
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2536
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 536
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 2124
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1966
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1185
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6137
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1134
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 6.648936170212766e-4
allele num: 3008
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 9.843400447427293e-4
allele num: 22350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2492
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.339728591483388e-4
allele num: 4274
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.577319587628866e-3
allele num: 388
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.131e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.809999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

DP
type: SiteQuality
SIO_000300: 1.966627e6

FS
type: SiteQuality
SIO_000300: 7.1916e1

VQSLOD
type: SiteQuality
SIO_000300: -2.293e1

MQ
type: SiteQuality
SIO_000300: 5.93e1

QD
type: SiteQuality
SIO_000300: 8.6e-1

GenotypeQuality
all individuals: 2037
bin: 1.75e1
variant carriers: 83

GenotypeQuality
all individuals: 2536
bin: 2.25e1
variant carriers: 81

GenotypeQuality
all individuals: 2100
bin: 3.25e1
variant carriers: 74

GenotypeQuality
all individuals: 195
bin: 8.25e1
variant carriers: 13

GenotypeQuality
all individuals: 1193
bin: 6.75e1
variant carriers: 19

GenotypeQuality
all individuals: 882
bin: 5.75e1
variant carriers: 46

GenotypeQuality
all individuals: 1966
bin: 2.75e1
variant carriers: 81

GenotypeQuality
all individuals: 32323
bin: 2.5e0
variant carriers: 64

GenotypeQuality
all individuals: 1397
bin: 4.25e1
variant carriers: 58

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 8

GenotypeQuality
all individuals: 374
bin: 7.25e1
variant carriers: 23

GenotypeQuality
all individuals: 6137
bin: 6.25e1
variant carriers: 24

GenotypeQuality
all individuals: 1185
bin: 5.25e1
variant carriers: 34

GenotypeQuality
all individuals: 536
bin: 9.75e1
variant carriers: 48

European (Non-Finnish)
type: Population
allele count: 329
allele frequency: 1.472035794183445e-2
allele num: 22350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 60
allele frequency: 5.291005291005291e-2
allele num: 1134
num of homozygotes: 0

Latino
type: Population
allele count: 81
allele frequency: 2.69281914893617e-2
allele num: 3008
num of homozygotes: 0

African
type: Population
allele count: 53
allele frequency: 1.240056153486196e-2
allele num: 4274
num of homozygotes: 0

South Asian
type: Population
allele count: 67
allele frequency: 6.315987933634993e-3
allele num: 10608
num of homozygotes: 0

Other
type: Population
allele count: 7
allele frequency: 1.804123711340206e-2
allele num: 388
num of homozygotes: 0

East Asian
type: Population
allele count: 55
allele frequency: 2.207062600321027e-2
allele num: 2492
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.809999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.93e1

QD
type: SiteQuality
SIO_000300: 8.6e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.293e1

FS
type: SiteQuality
SIO_000300: 7.1916e1

DP
type: SiteQuality
SIO_000300: 1.966627e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.131e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 163
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.25e1
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GenotypeQuality
all individuals: 2339
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variant carriers: 0

GenotypeQuality
all individuals: 876
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variant carriers: 0

GenotypeQuality
all individuals: 41382
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GenotypeQuality
all individuals: 107
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variant carriers: 0

GenotypeQuality
all individuals: 56
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GenotypeQuality
all individuals: 2509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

MQRankSum
type: SiteQuality
SIO_000300: 3.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.304e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.954e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

QD
type: SiteQuality
SIO_000300: 1.398e1

DP
type: SiteQuality
SIO_000300: 1.731712e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.797e1

GenotypeQuality
all individuals: 1019
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10114
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41447
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2335
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variant carriers: 0

GenotypeQuality
all individuals: 2503
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.12449543233482e-4
allele num: 65898
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.418e0

FS
type: SiteQuality
SIO_000300: 5.104e0

QD
type: SiteQuality
SIO_000300: 1.318e1

VQSLOD
type: SiteQuality
SIO_000300: -7.072000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.886e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.967e0

MQRankSum
type: SiteQuality
SIO_000300: 4.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.06e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.88e0

DP
type: SiteQuality
SIO_000300: 1.730404e6

GenotypeQuality
all individuals: 145
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65910
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.386e0

BaseQRankSum
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SIO_000300: -9.29e-1

MQ
type: SiteQuality
SIO_000300: 5.868e1

FS
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 1.729177e6

MQRankSum
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SIO_000300: 1.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.13e0

QD
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VQSLOD
type: SiteQuality
SIO_000300: -2.739e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.701202949165696e-5
allele num: 10308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65910
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.035e1

VQSLOD
type: SiteQuality
SIO_000300: -3.126e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e-1

ReadPosRankSum
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SIO_000300: 1.69e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.208e0

FS
type: SiteQuality
SIO_000300: 5.352e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.871e1

DP
type: SiteQuality
SIO_000300: 1.728579e6

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.093845216331505e-5
allele num: 16410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.225e0

QD
type: SiteQuality
SIO_000300: 6.63e0

MQ
type: SiteQuality
SIO_000300: 5.9e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 1.728213e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.05e0

VQSLOD
type: SiteQuality
SIO_000300: -2.036e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163061177017911e-4
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.71e-1

MQ
type: SiteQuality
SIO_000300: 5.706e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

FS
type: SiteQuality
SIO_000300: 1.985e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.321e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

QD
type: SiteQuality
SIO_000300: 1.163e1

DP
type: SiteQuality
SIO_000300: 1.708574e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.050910789350771e-3
allele num: 8564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65236
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16316
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.848e-1

MQ
type: SiteQuality
SIO_000300: 5.848e1

MQRankSum
type: SiteQuality
SIO_000300: -4.47e-1

FS
type: SiteQuality
SIO_000300: 1.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.269e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.96e-1

QD
type: SiteQuality
SIO_000300: 1.296e1

DP
type: SiteQuality
SIO_000300: 1.689167e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65150
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16284
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.758101243650377e-5
allele num: 11418
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.79e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.91e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.758101243650377e-5
allele num: 11418
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65150
num of homozygotes: 0

East Asian
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South Asian
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allele count: 2
allele frequency: 1.228199459592238e-4
allele num: 16284
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6360
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.93e1

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65132
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.336994624912363e-4
allele num: 8558
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South Asian
type: Population
allele count: 1
allele frequency: 6.141751627564181e-5
allele num: 16282
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Other
type: Population
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DP
type: SiteQuality
SIO_000300: 1.680682e6

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6338
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537988311288834e-5
allele num: 65020
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.574e0

VQSLOD
type: SiteQuality
SIO_000300: -4.522e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.67063e6

MQ
type: SiteQuality
SIO_000300: 5.863e1

QD
type: SiteQuality
SIO_000300: 6.0e-1

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 47

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
all individuals: 2019
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.973164956590371e-4
allele num: 10136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 43
allele frequency: 6.619661935404415e-4
allele num: 64958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.15955766192733e-4
allele num: 6330
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.37e0

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.52e-1

QD
type: SiteQuality
SIO_000300: 1.33e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.666043e6

MQRankSum
type: SiteQuality
SIO_000300: -7.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.909e1

GenotypeQuality
all individuals: 519
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 276
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GenotypeQuality
all individuals: 190
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.984126984126984e-4
allele num: 10080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16190
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.74e-1

MQ
type: SiteQuality
SIO_000300: 5.656e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.642088e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

QD
type: SiteQuality
SIO_000300: 1.267e1

GenotypeQuality
all individuals: 184
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6592
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 489
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GenotypeQuality
all individuals: 206
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6092
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10960
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.580078371887246e-5
allele num: 63288
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15990
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.881e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.742e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.149e0

DP
type: SiteQuality
SIO_000300: 1.560085e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

VQSLOD
type: SiteQuality
SIO_000300: -4.61e-1

QD
type: SiteQuality
SIO_000300: 1.086e1

GenotypeQuality
all individuals: 7884
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
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GenotypeQuality
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GenotypeQuality
all individuals: 577
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 181
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GenotypeQuality
all individuals: 870
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 680
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 1.007695126419934e-3
allele num: 10916
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6070
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15986
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
type: SiteQuality
SIO_000300: 1.553175e6

VQSLOD
type: SiteQuality
SIO_000300: 8.22e-1

FS
type: SiteQuality
SIO_000300: 4.762e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.85e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

QD
type: SiteQuality
SIO_000300: 1.186e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1684
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 170
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variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5954
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9682
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.324878776575905e-5
allele num: 10724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62150
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15810
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.080000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.418e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.65e-1

DP
type: SiteQuality
SIO_000300: 1.492108e6

GenotypeQuality
all individuals: 276
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
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variant carriers: 0

GenotypeQuality
all individuals: 701
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GenotypeQuality
all individuals: 626
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1552
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GenotypeQuality
all individuals: 30482
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7912
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15742
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.62813415825464e-5
allele num: 61420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5860
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 1.281e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.450992e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.193e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7056
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7870
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.367804381049414e-5
allele num: 15704
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 1.438333e6

FS
type: SiteQuality
SIO_000300: 4.562e0

QD
type: SiteQuality
SIO_000300: 1.448e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.84e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.6e-2

GenotypeQuality
all individuals: 168
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
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GenotypeQuality
all individuals: 882
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1594
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variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.638216310081583e-5
allele num: 61042
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9550
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.910584638899503e-4
allele num: 15702
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.942e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-1

QD
type: SiteQuality
SIO_000300: 1.283e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.007e0

FS
type: SiteQuality
SIO_000300: 1.1498e1

VQSLOD
type: SiteQuality
SIO_000300: -6.945e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.27e-1

DP
type: SiteQuality
SIO_000300: 1.434564e6

GenotypeQuality
all individuals: 12215
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 598
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GenotypeQuality
all individuals: 435
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GenotypeQuality
all individuals: 2737
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GenotypeQuality
all individuals: 1389
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 548
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variant carriers: 2

GenotypeQuality
all individuals: 26713
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 233
allele frequency: 2.484008528784648e-2
allele num: 9380
num of homozygotes: 5

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.336781340718742e-5
allele num: 59938
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.75561797752809e-4
allele num: 5696
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.463985945734921e-3
allele num: 10246
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7676
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.369911e6

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

FS
type: SiteQuality
SIO_000300: 8.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.49e-1

QD
type: SiteQuality
SIO_000300: 1.436e1

GenotypeQuality
all individuals: 1172
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1495
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1101
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2985
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 152
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.070205479452055e-4
allele num: 9344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.353116721993092e-5
allele num: 59646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5660
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.459113809585325e-5
allele num: 15482
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.314751511964239e-4
allele num: 7606
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

DP
type: SiteQuality
SIO_000300: 1.349486e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.262e0

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

FS
type: SiteQuality
SIO_000300: 3.536e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.307e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e-1

GenotypeQuality
all individuals: 1210
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3554
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1412
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 167
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.090094675760969e-5
allele num: 58938
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9238
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.300708e6

FS
type: SiteQuality
SIO_000300: 5.801e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

MQRankSum
type: SiteQuality
SIO_000300: -8.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.816e0

QD
type: SiteQuality
SIO_000300: 1.533e1

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeQuality
all individuals: 5284
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14583
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6529
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18073
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1063
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1278
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.914975105323631e-4
allele num: 5222
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.25886604924328e-4
allele num: 8854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.377886132224294e-5
allele num: 55784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.191489361702127e-4
allele num: 9400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15038
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

FS
type: SiteQuality
SIO_000300: 6.846e0

QD
type: SiteQuality
SIO_000300: 1.204e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

DP
type: SiteQuality
SIO_000300: 1.096804e6

GenotypeQuality
all individuals: 6504
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 612
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 547
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.06224771616741e-4
allele num: 9414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5244
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.639224538573895e-5
allele num: 15062
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.414827391058291e-4
allele num: 7068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.579098067287044e-5
allele num: 55880
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

DP
type: SiteQuality
SIO_000300: 1.092793e6

FS
type: SiteQuality
SIO_000300: 4.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.56e-1

QD
type: SiteQuality
SIO_000300: 1.492e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

GenotypeQuality
all individuals: 18736
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5290
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 470
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16767
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8912
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15052
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.784567064030266e-5
allele num: 56036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: 3.83e-1

DP
type: SiteQuality
SIO_000300: 1.089118e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

QD
type: SiteQuality
SIO_000300: 1.359e1

GenotypeQuality
all individuals: 1149
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5738
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7477
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 925
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13029
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 485
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5110
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8772
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.820034944670938e-5
allele num: 54944
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-3

MQ
type: SiteQuality
SIO_000300: 6.2e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.48e-1

QD
type: SiteQuality
SIO_000300: 1.231e1

DP
type: SiteQuality
SIO_000300: 1.03412e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.002e0

GenotypeQuality
all individuals: 1337
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7903
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4533
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1083
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10743
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5954
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6764
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4988
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.844065796267611e-5
allele num: 54228
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8694
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.005493e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.406e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.083e0

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.83e-1