X-74520858-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074520858
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074520858
    reference: chr 0
allele count: 1
allele frequency: 1.276226453621931e-5
allele num: 78356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*27+8T>C
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.586+58T>C
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.367+58T>C
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000433987
  ensembl transcript: ENST00000462237
  gene symbol: UPRT
  hgvsc: ENST00000462237.1:c.*350+58T>C
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.823+58T>C
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.415+58T>C
  variant of: http://identifiers.org/hgnc/28334
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 246
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 889
  bin: 4.75e1
  variant carriers: 0
hgvs: c.*27+8T>C
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ

X-74520861-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074520861
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074520861
    reference: chr 0
allele count: 1
allele frequency: 1.288809269116263e-5
allele num: 77591
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.586+61A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.823+61A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.367+61A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.415+61A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000433987
  ensembl transcript: ENST00000462237
  gene symbol: UPRT
  hgvsc: ENST00000462237.1:c.*350+61A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*27+11A>G
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD

X-74520867-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074520867
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074520867
    reference: chr 0
allele count: 1
allele frequency: 1.323784434942614e-5
allele num: 75541
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.367+67T>C
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000433987
  ensembl transcript: ENST00000462237
  gene symbol: UPRT
  hgvsc: ENST00000462237.1:c.*350+67T>C
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.586+67T>C
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.823+67T>C
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.415+67T>C
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*27+17T>C
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

X-74523214-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523214
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523214
    reference: chr 0
allele count: 2
allele frequency: 2.601084652300009e-5
allele num: 76891
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.416-26C>T
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.824-26C>T
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.587-26C>T
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000433987
  ensembl transcript: ENST00000462237
  gene symbol: UPRT
  hgvsc: ENST00000462237.1:c.*351-26C>T
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.368-26C>T
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*28-26C>T
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP

X-74523215-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523215
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523215
    reference: chr 0
allele count: 2
allele frequency: 2.594403870850575e-5
allele num: 77089
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.368-25C>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*28-25C>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.587-25C>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000433987
  ensembl transcript: ENST00000462237
  gene symbol: UPRT
  hgvsc: ENST00000462237.1:c.*351-25C>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.824-25C>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.416-25C>A
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4780
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8559
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3197
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24192
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2312
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-74523236-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523236
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523236
    reference: chr 0
allele count: 6
allele frequency: 7.244102093545505e-5
allele num: 82826
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.368-4G>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.587-4G>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*28-4G>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.824-4G>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000433987
  ensembl transcript: ENST00000462237
  gene symbol: UPRT
  hgvsc: ENST00000462237.1:c.*351-4G>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.416-4G>A
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10196
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30092
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4664
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6533
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
hgvs: c.824-4G>A
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

X-74523255-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523255
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523255
    reference: chr 0
allele count: 1
allele frequency: 1.1648223645894e-5
allele num: 85850
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.602T>C
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000433987
  ensembl transcript: ENST00000462237
  gene symbol: UPRT
  hgvsc: ENST00000462237.1:c.*366T>C
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.431T>C
  hgvsp: ENSP00000434037.1:p.Ile144Thr
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*43T>C
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.839T>C
  hgvsp: ENSP00000362481.4:p.Ile280Thr
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.383T>C
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
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genotype depth: GenotypeDepth
  all individuals: 1740
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1854
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 6531
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genotype quality: GenotypeQuality
  all individuals: 38782
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile280Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

X-74523268-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523268
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523268
    reference: chr 0
allele count: 1
allele frequency: 1.155561718551388e-5
allele num: 86538
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000433987
  ensembl transcript: ENST00000462237
  gene symbol: UPRT
  hgvsc: ENST00000462237.1:c.*379A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.444A>G
  hgvsp: ENST00000530743.1:c.444A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.615A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.396A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.852A>G
  hgvsp: ENST00000373383.4:c.852A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*56A>G
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2169
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1619
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro284Pro
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff

X-74523278-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523278
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523278
    reference: chr 0
allele count: 1
allele frequency: 1.151410477835348e-5
allele num: 86850
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*66A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.862A>G
  hgvsp: ENSP00000362481.4:p.Ile288Val
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000433987
  ensembl transcript: ENST00000462237
  gene symbol: UPRT
  hgvsc: ENST00000462237.1:c.*389A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.406A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.454A>G
  hgvsp: ENSP00000434037.1:p.Ile152Val
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.625A>G
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12069
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2179
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5226
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1624
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1553
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ile288Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

X-74523292-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523292
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523292
    reference: chr 0
allele count: 1
allele frequency: 1.149398864393922e-5
allele num: 87002
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.420A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.639A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.468A>G
  hgvsp: ENST00000530743.1:c.468A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.876A>G
  hgvsp: ENST00000373383.4:c.876A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000433987
  ensembl transcript: ENST00000462237
  gene symbol: UPRT
  hgvsc: ENST00000462237.1:c.*403A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*80A>G
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33455
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6531
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2171
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40552
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu292Glu
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ

X-74523307-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523307
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523307
    reference: chr 0
allele count: 1
allele frequency: 1.149887885931122e-5
allele num: 86965
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.435A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.891A>G
  hgvsp: ENST00000373383.4:c.891A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.483A>G
  hgvsp: ENST00000530743.1:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*95A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000433987
  ensembl transcript: ENST00000462237
  gene symbol: UPRT
  hgvsc: ENST00000462237.1:c.*418A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.654A>G
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12354
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5204
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6529
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1115
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 40137
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 2
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala297Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

X-74523314-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523314
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523314
    reference: chr 0
allele count: 1
allele frequency: 1.151410477835348e-5
allele num: 86850
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*102C>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000433987
  ensembl transcript: ENST00000462237
  gene symbol: UPRT
  hgvsc: ENST00000462237.1:c.*425C>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.442C>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.661C>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.490C>A
  hgvsp: ENSP00000434037.1:p.His164Asn
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.898C>A
  hgvsp: ENSP00000362481.4:p.His300Asn
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39455
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6529
  bin: 9.75e1
  variant carriers: 1
hgvs: p.His300Asn
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

X-74523325-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523325
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523325
    reference: chr 0
allele count: 2
allele frequency: 2.308802308802309e-5
allele num: 86625
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.672G>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000433987
  ensembl transcript: ENST00000462237
  gene symbol: UPRT
  hgvsc: ENST00000462237.1:c.*436G>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.909G>A
  hgvsp: ENST00000373383.4:c.909G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.453G>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.501G>A
  hgvsp: ENST00000530743.1:c.501G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*113G>A
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6530
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 421
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38245
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 2252
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5115
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln303Gln
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

X-74523358-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523358
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523358
    reference: chr 0
allele count: 2
allele frequency: 2.361721222426905e-5
allele num: 84684
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*146A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.486A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.705A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.*12A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.*12A>G
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20741
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1512
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19325
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6746
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2648
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4349
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6523
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1770
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5017
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

X-74523367-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523367
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523367
    reference: chr 0
allele count: 77473
allele frequency: 9.267770414144556e-1
allele num: 83594
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*155A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.*21A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.714A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.*21A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.495A>G
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5566
  bin: 3.25e1
  variant carriers: 5408
genotype depth: GenotypeDepth
  all individuals: 7035
  bin: 2.75e1
  variant carriers: 6781
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.25e1
  variant carriers: 476
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 4.75e1
  variant carriers: 2362
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 5.25e1
  variant carriers: 1843
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.75e1
  variant carriers: 1211
genotype depth: GenotypeDepth
  all individuals: 4311
  bin: 3.75e1
  variant carriers: 4245
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 6.25e1
  variant carriers: 913
genotype depth: GenotypeDepth
  all individuals: 9512
  bin: 1.75e1
  variant carriers: 9266
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 2.5e0
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 6.75e1
  variant carriers: 672
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 7.5e0
  variant carriers: 1955
genotype depth: GenotypeDepth
  all individuals: 8807
  bin: 2.25e1
  variant carriers: 8546
genotype depth: GenotypeDepth
  all individuals: 7739
  bin: 1.25e1
  variant carriers: 6717
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.75e1
  variant carriers: 390
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.25e1
  variant carriers: 251
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 9.75e1
  variant carriers: 2300
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 4.25e1
  variant carriers: 3276
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 185
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.75e1
  variant carriers: 234
genotype quality: GenotypeQuality
  all individuals: 2499
  bin: 8.25e1
  variant carriers: 2473
genotype quality: GenotypeQuality
  all individuals: 2700
  bin: 7.75e1
  variant carriers: 2664
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 7.5e0
  variant carriers: 99
genotype quality: GenotypeQuality
  all individuals: 3628
  bin: 4.75e1
  variant carriers: 3611
genotype quality: GenotypeQuality
  all individuals: 22728
  bin: 9.75e1
  variant carriers: 22567
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.5e0
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 1803
  bin: 4.25e1
  variant carriers: 1777
genotype quality: GenotypeQuality
  all individuals: 3228
  bin: 6.75e1
  variant carriers: 3150
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 1.25e1
  variant carriers: 143
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 2.75e1
  variant carriers: 707
genotype quality: GenotypeQuality
  all individuals: 3703
  bin: 5.25e1
  variant carriers: 3676
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 8.75e1
  variant carriers: 1144
genotype quality: GenotypeQuality
  all individuals: 3953
  bin: 6.25e1
  variant carriers: 3518
genotype quality: GenotypeQuality
  all individuals: 1794
  bin: 5.75e1
  variant carriers: 1767
genotype quality: GenotypeQuality
  all individuals: 2180
  bin: 3.25e1
  variant carriers: 2028
num of homozygotes: 22536
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

X-74523369-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523369
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523367
    reference: chr 0
allele count: 1
allele frequency: 1.330548052742925e-5
allele num: 75157
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.*24_*25delTT
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.717_718delTT
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*158_*159delTT
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.*24_*25delTT
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.498_499delTT
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9061
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17906
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19858
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: CTT
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

X-74523371-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523371
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523371
    reference: chr 0
allele count: 1
allele frequency: 1.352082206598161e-5
allele num: 73960
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.*25T>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.718T>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*159T>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.*25T>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.499T>G
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10828
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 512
  bin: 5.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-74523373-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523373
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523373
    reference: chr 0
allele count: 22
allele frequency: 2.973535533749628e-4
allele num: 73986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.720T>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*161T>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.*27T>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.501T>A
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.*27T>A
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum

X-74523379-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074523379
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074523379
    reference: chr 0
allele count: 1
allele frequency: 1.389969976648504e-5
allele num: 71944
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362477
  ensembl transcript: ENST00000373379
  gene symbol: UPRT
  hgvsc: ENST00000373379.1:c.*167A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000434037
  ensembl transcript: ENST00000530743
  gene symbol: UPRT
  hgvsc: ENST00000530743.1:c.*33A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000474175
  gene symbol: UPRT
  hgvsc: ENST00000474175.1:n.507A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000094841
  ensembl protein: ENSP00000362481
  ensembl transcript: ENST00000373383
  gene symbol: UPRT
  hgvsc: ENST00000373383.4:c.*33A>G
  variant of: http://identifiers.org/hgnc/28334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000094841
  ensembl transcript: ENST00000526850
  gene symbol: UPRT
  hgvsc: ENST00000526850.1:n.726A>G
  variant of: http://identifiers.org/hgnc/28334
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ

X-74598944-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074598944
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074598944
    reference: chr 0
allele count: 1
allele frequency: 1.163399453202257e-5
allele num: 85955
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.*32+11T>C
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.*32+11T>C
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
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  allele frequency: 0.0e0
  allele num: 8439
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

X-74598951-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074598951
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074598951
    reference: chr 0
allele count: 1
allele frequency: 1.162331171397355e-5
allele num: 86034
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.*32+4A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.*32+4A>G
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: c.*32+4A>G
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population: Other
  type: Population
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  allele frequency: 0.0e0
  allele num: 612
  num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
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site quality: BaseQRankSum
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site quality: FS
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X-74598956-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074598956
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074598956
    reference: chr 0
allele count: 1
allele frequency: 1.161467165323236e-5
allele num: 86098
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.*31A>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.*31A>T
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: c.*31A>T
num of homozygotes: 0
population: East Asian
  type: Population
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  allele frequency: 0.0e0
  allele num: 6586
  num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
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X-74598956-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074598956
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074598956
    reference: chr 0
allele count: 1
allele frequency: 1.161467165323236e-5
allele num: 86098
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.*31A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.*31A>G
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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population: East Asian
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  allele num: 6586
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population: Latino
population: European (Finnish)
population: South Asian
population: Other
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population: African
reference allele: T
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
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X-74598959-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074598959
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074598959
    reference: chr 0
allele count: 1
allele frequency: 1.160887382315042e-5
allele num: 86141
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.*28G>C
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.*28G>C
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
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  allele frequency: 0.0e0
  allele num: 4464
  num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

X-74598963-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074598963
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074598963
    reference: chr 0
allele count: 3
allele frequency: 3.478341526760041e-5
allele num: 86248
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.*24C>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.*24C>A
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
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  allele frequency: 0.0e0
  allele num: 4467
  num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
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X-74598967-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074598967
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074598967
    reference: chr 0
allele count: 2
allele frequency: 2.317067519347514e-5
allele num: 86316
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.*20A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.*20A>G
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4472
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

X-74598971-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074598971
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074598971
    reference: chr 0
allele count: 1
allele frequency: 1.156778141520238e-5
allele num: 86447
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.*16C>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.*16C>G
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4621
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: Other
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  allele num: 616
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population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
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site quality: ReadPosRankSum
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site quality: InbreedingCoeff
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site quality: DP

X-74598975-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074598975
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074598975
    reference: chr 0
allele count: 1
allele frequency: 1.155107887076653e-5
allele num: 86572
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.*12T>C
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.*12T>C
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: Other
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  allele num: 617
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population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
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site quality: DP
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X-74598990-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074598990
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074598990
    reference: chr 0
allele count: 1
allele frequency: 1.150271464065519e-5
allele num: 86936
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.1011A>G
  hgvsp: ENST00000373367.3:c.1011A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.984A>G
  hgvsp: ENST00000541184.1:c.984A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 210
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  variant carriers: 0
hgvs: p.Thr337Thr
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 1
  allele frequency: 1.084010840108401e-4
  allele num: 9225
  num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

X-74598993-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074598993
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074598993
    reference: chr 0
allele count: 22
allele frequency: 2.529055397808919e-4
allele num: 86989
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.981A>G
  hgvsp: ENST00000541184.1:c.981A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.1008A>G
  hgvsp: ENST00000373367.3:c.1008A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 88
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  variant carriers: 0
hgvs: p.Glu336Glu
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 3
  allele frequency: 3.251327625447058e-4
  allele num: 9227
  num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

X-74598996-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074598996
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074598996
    reference: chr 0
allele count: 1
allele frequency: 1.148725489069877e-5
allele num: 87053
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.1005G>A
  hgvsp: ENST00000373367.3:c.1005G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.978G>A
  hgvsp: ENST00000541184.1:c.978G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 87
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  variant carriers: 0
hgvs: p.Thr335Thr
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4496
  num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

X-74598997-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074598997
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074598997
    reference: chr 0
allele count: 10
allele frequency: 1.148567162464825e-4
allele num: 87065
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*319C>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.977C>T
  hgvsp: ENSP00000445420.1:p.Thr326Met
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.1004C>T
  hgvsp: ENSP00000362465.3:p.Thr335Met
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2297
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr335Met
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

X-74598998-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074598998
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074598998
    reference: chr 0
allele count: 6
allele frequency: 6.889266522757543e-5
allele num: 87092
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.1003A>T
  hgvsp: ENSP00000362465.3:p.Thr335Ser
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.976A>T
  hgvsp: ENSP00000445420.1:p.Thr326Ser
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*318A>T
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1473
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  variant carriers: 0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Thr335Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD

X-74599009-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074599009
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074599009
    reference: chr 0
allele count: 8
allele frequency: 9.17610084534829e-5
allele num: 87183
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.965T>C
  hgvsp: ENSP00000445420.1:p.Leu322Pro
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.992T>C
  hgvsp: ENSP00000362465.3:p.Leu331Pro
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*307T>C
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 6
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  variant carriers: 0
hgvs: p.Leu331Pro
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

X-74599022-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074599022
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074599022
    reference: chr 0
allele count: 3
allele frequency: 3.441511511856007e-5
allele num: 87171
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*294G>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.952G>A
  hgvsp: ENSP00000445420.1:p.Gly318Ser
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.979G>A
  hgvsp: ENSP00000362465.3:p.Gly327Ser
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Gly327Ser
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

X-74599037-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074599037
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074599037
    reference: chr 0
allele count: 2
allele frequency: 2.29750376216241e-5
allele num: 87051
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*283-4G>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.941-4G>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.968-4G>T
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 104
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  variant carriers: 0
hgvs: c.968-4G>T
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

X-74599048-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074599048
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074599048
    reference: chr 0
allele count: 6
allele frequency: 6.902899217671422e-5
allele num: 86920
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.968-15G>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*283-15G>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.941-15G>A
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 364
  bin: 8.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1801
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 642
  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 1762
  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24459
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

X-74599049-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074599049
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074599049
    reference: chr 0
allele count: 1
allele frequency: 1.150509675786373e-5
allele num: 86918
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*283-16C>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.968-16C>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.941-16C>T
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12144
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 302
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 559
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1800
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
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  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

X-74599056-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074599056
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074599056
    reference: chr 0
allele count: 1
allele frequency: 1.151582850628188e-5
allele num: 86837
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.968-23A>C
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.941-23A>C
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*283-23A>C
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 868
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17784
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  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 275
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2283
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 22538
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP

X-74599065-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074599065
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074599065
    reference: chr 0
allele count: 5
allele frequency: 5.766746632219967e-5
allele num: 86704
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.968-32C>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*283-32C>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.941-32C>G
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 91
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4622
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2940
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 559
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 454
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1753
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

X-74599071-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074599071
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074599071
    reference: chr 0
allele count: 1
allele frequency: 1.156497201276773e-5
allele num: 86468
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*283-38C>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.941-38C>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.968-38C>T
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4751
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3883
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
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X-74599084-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074599084
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074599084
    reference: chr 0
allele count: 2
allele frequency: 2.325527313318295e-5
allele num: 86002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*283-51C>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.968-51C>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.941-51C>A
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
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X-74636884-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074636884
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074636884
    reference: chr 0
allele count: 1
allele frequency: 1.203470809815508e-5
allele num: 83093
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.940+38C>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*282+38C>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
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  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.967+38C>A
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
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X-74636888-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074636888
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074636888
    reference: chr 0
allele count: 1
allele frequency: 1.201460976547482e-5
allele num: 83232
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*282+34A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.940+34A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.967+34A>G
  variant of: http://identifiers.org/hgnc/20342
canonical: true
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filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: African
population: Latino
population: South Asian
population: Other
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population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
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X-74636902-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074636902
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074636902
    reference: chr 0
allele count: 1
allele frequency: 1.189499101928178e-5
allele num: 84069
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.940+20A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*282+20A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
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  gene symbol: ZDHHC15
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  variant of: http://identifiers.org/hgnc/20342
canonical: true
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

X-74636911-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074636911
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074636911
    reference: chr 0
allele count: 1
allele frequency: 1.17974611863527e-5
allele num: 84764
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.967+11T>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*282+11T>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.940+11T>A
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1729
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

X-74636912-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074636912
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074636912
    reference: chr 0
allele count: 1
allele frequency: 1.178967224711153e-5
allele num: 84820
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.940+10G>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.967+10G>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*282+10G>A
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1873
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

X-74636917-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074636917
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074636917
    reference: chr 0
allele count: 1
allele frequency: 1.171522627959559e-5
allele num: 85359
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.940+5G>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*282+5G>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.967+5G>T
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.967+5G>T
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

X-74636917-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074636917
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074636917
    reference: chr 0
allele count: 2
allele frequency: 2.343045255919118e-5
allele num: 85359
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.940+5G>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*282+5G>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.967+5G>A
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5170
  bin: 6.75e1
  variant carriers: 0
hgvs: c.967+5G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-74636938-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074636938
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074636938
    reference: chr 0
allele count: 8
allele frequency: 9.217758010807821e-5
allele num: 86789
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.924C>T
  hgvsp: ENST00000541184.1:c.924C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*266C>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.951C>T
  hgvsp: ENST00000373367.3:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 13235
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genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn317Asn
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

X-74636982-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074636982
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074636982
    reference: chr 0
allele count: 6
allele frequency: 6.871435442864014e-5
allele num: 87318
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.907T>A
  hgvsp: ENSP00000362465.3:p.Ser303Thr
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.880T>A
  hgvsp: ENSP00000445420.1:p.Ser294Thr
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*222T>A
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 83
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  variant carriers: 0
hgvs: p.Ser303Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum

X-74636987-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074636987
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074636987
    reference: chr 0
allele count: 1
allele frequency: 1.146171215056105e-5
allele num: 87247
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.902A>G
  hgvsp: ENSP00000362465.3:p.Asn301Ser
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*217A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.875A>G
  hgvsp: ENSP00000445420.1:p.Asn292Ser
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asn301Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-74636996-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074636996
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074636996
    reference: chr 0
allele count: 1
allele frequency: 1.147723490456679e-5
allele num: 87129
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.893G>A
  hgvsp: ENSP00000362465.3:p.Arg298Lys
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.866G>A
  hgvsp: ENSP00000445420.1:p.Arg289Lys
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*208G>A
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg298Lys
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

X-74637018-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074637018
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074637018
    reference: chr 0
allele count: 1
allele frequency: 1.160564034120583e-5
allele num: 86165
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.844G>A
  hgvsp: ENSP00000445420.1:p.Asp282Asn
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*186G>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.871G>A
  hgvsp: ENSP00000362465.3:p.Asp291Asn
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5165
  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 911
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp291Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

X-74637023-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074637023
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074637023
    reference: chr 0
allele count: 2
allele frequency: 2.330133283623823e-5
allele num: 85832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*181C>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.839C>T
  hgvsp: ENSP00000445420.1:p.Pro280Leu
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.866C>T
  hgvsp: ENSP00000362465.3:p.Pro289Leu
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2458
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  variant carriers: 0
hgvs: p.Pro289Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

X-74637025-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074637025
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074637025
    reference: chr 0
allele count: 1
allele frequency: 1.165963202201339e-5
allele num: 85766
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.864C>T
  hgvsp: ENST00000373367.3:c.864C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.837C>T
  hgvsp: ENST00000541184.1:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*179C>T
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.864C>T
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD

X-74637030-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074637030
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074637030
    reference: chr 0
allele count: 1
allele frequency: 1.1707271386258e-5
allele num: 85417
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.864-5A>C
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.837-5A>C
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*179-5A>C
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 696
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.864-5A>C
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-74637033-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074637033
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074637033
    reference: chr 0
allele count: 1
allele frequency: 1.175253854832644e-5
allele num: 85088
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.864-8C>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*179-8C>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.837-8C>G
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4934
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25941
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1511
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4893
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2434
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13220
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1681
  bin: 7.25e1
  variant carriers: 0
hgvs: c.864-8C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

X-74637051-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074637051
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074637051
    reference: chr 0
allele count: 1
allele frequency: 1.196000574080276e-5
allele num: 83612
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.837-26G>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*179-26G>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.864-26G>T
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8883
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8765
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2548
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1508
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18590
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4425
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1839
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13215
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ

X-74637052-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074637052
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074637052
    reference: chr 0
allele count: 1
allele frequency: 1.195685965038142e-5
allele num: 83634
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.864-27A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*179-27A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.837-27A>G
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8919
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4413
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

X-74637060-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074637060
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074637060
    reference: chr 0
allele count: 47
allele frequency: 5.690692690486857e-4
allele num: 82591
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*179-35G>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.837-35G>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.864-35G>A
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10211
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 9103
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2022
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3764
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 927
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1120
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  variant carriers: 3
genotype depth: GenotypeDepth
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  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 7.5e0
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8375
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2800
  bin: 3.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 2
genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 12877
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 13221
  bin: 9.75e1
  variant carriers: 20
num of homozygotes: 1
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

X-74637066-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074637066
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074637066
    reference: chr 0
allele count: 1
allele frequency: 1.221821736208687e-5
allele num: 81845
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.864-41A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*179-41A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.837-41A>G
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

X-74637070-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074637070
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074637070
    reference: chr 0
allele count: 1
allele frequency: 1.23117836080913e-5
allele num: 81223
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*179-45G>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.864-45G>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.837-45G>T
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1798
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genotype quality: GenotypeQuality
  all individuals: 165
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  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

X-74637073-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074637073
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074637073
    reference: chr 0
allele count: 1
allele frequency: 1.243719217949356e-5
allele num: 80404
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.864-48A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.837-48A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*179-48A>G
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

X-74637075-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074637075
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074637075
    reference: chr 0
allele count: 1
allele frequency: 1.248034345905199e-5
allele num: 80126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*179-50C>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.837-50C>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.864-50C>A
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

X-74641648-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074641648
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074641648
    reference: chr 0
allele count: 1
allele frequency: 1.208327795164272e-5
allele num: 82759
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.836+51C>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*178+51C>A
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.863+51C>A
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1209
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2640
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23680
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1445
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6480
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1328
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4641
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 2298
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1913
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2160
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS

X-74641650-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074641650
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074641650
    reference: chr 0
allele count: 4
allele frequency: 4.829984544049459e-5
allele num: 82816
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.863+49A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*178+49A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.836+49A>G
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5377
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 150
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3113
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genotype quality: GenotypeQuality
  all individuals: 819
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 6495
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
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genotype quality: GenotypeQuality
  all individuals: 1423
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4633
  bin: 9.75e1
  variant carriers: 4
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

X-74641660-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074641660
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074641660
    reference: chr 0
allele count: 2
allele frequency: 2.409609522776834e-5
allele num: 83001
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.863+39C>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.836+39C>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*178+39C>T
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7089
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2979
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2066
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

X-74641662-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074641662
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074641662
    reference: chr 0
allele count: 1
allele frequency: 1.204572557427997e-5
allele num: 83017
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*178+37G>C
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.836+37G>C
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.863+37G>C
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 17994
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4972
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1354
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 425
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 29954
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  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

X-74641669-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074641669
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074641669
    reference: chr 0
allele count: 14
allele frequency: 1.681398923904689e-4
allele num: 83264
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*178+30A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.836+30A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.863+30A>G
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1009
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3800
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1857
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4025
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1523
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

X-74641675-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074641675
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074641675
    reference: chr 0
allele count: 2
allele frequency: 2.398311588641596e-5
allele num: 83392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.836+24G>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.863+24G>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*178+24G>T
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17529
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 132
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

X-74641684-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074641684
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074641684
    reference: chr 0
allele count: 1
allele frequency: 1.192961526990755e-5
allele num: 83825
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*178+15C>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.863+15C>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.836+15C>T
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 786
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

X-74641699-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074641699
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074641699
    reference: chr 0
allele count: 1
allele frequency: 1.17974611863527e-5
allele num: 84764
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.863G>A
  hgvsp: ENSP00000362465.3:p.Ser288Asn
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.836G>A
  hgvsp: ENSP00000445420.1:p.Ser279Asn
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*178G>A
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 36287
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  variant carriers: 0
hgvs: p.Ser288Asn
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD

X-74641708-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074641708
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074641708
    reference: chr 0
allele count: 1
allele frequency: 1.170617500731636e-5
allele num: 85425
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.827T>C
  hgvsp: ENSP00000445420.1:p.Ile276Thr
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.854T>C
  hgvsp: ENSP00000362465.3:p.Ile285Thr
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*169T>C
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6884
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile285Thr
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

X-74641709-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074641709
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074641709
    reference: chr 0
allele count: 9
allele frequency: 1.052803967901177e-4
allele num: 85486
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*168A>G
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.826A>G
  hgvsp: ENSP00000445420.1:p.Ile276Val
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.853A>G
  hgvsp: ENSP00000362465.3:p.Ile285Val
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19827
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37595
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2083
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4605
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6879
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile285Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

X-74641731-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24074641731
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24074641731
    reference: chr 0
allele count: 1
allele frequency: 1.161399718941268e-5
allele num: 86103
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362459
  ensembl transcript: ENST00000373361
  gene symbol: ZDHHC15
  hgvsc: ENST00000373361.3:c.*146G>T
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000362465
  ensembl transcript: ENST00000373367
  gene symbol: ZDHHC15
  hgvsc: ENST00000373367.3:c.831G>T
  hgvsp: ENSP00000362465.3:p.Lys277Asn
  variant of: http://identifiers.org/hgnc/20342
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102383
  ensembl protein: ENSP00000445420
  ensembl transcript: ENST00000541184
  gene symbol: ZDHHC15
  hgvsc: ENST00000541184.1:c.804G>T
  hgvsp: ENSP00000445420.1:p.Lys268Asn
  variant of: http://identifiers.org/hgnc/20342
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2065
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6876
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37909
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4609
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2000
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Lys277Asn
num of homozygotes: 0
population: African
population: Latino
reference allele: C

GenotypeQuality
all individuals: 6395
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4044
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5749
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3430
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3619
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 565
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6178
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.466705778820769e-4
allele num: 6818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4367
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.429267e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
SIO_000300: 2.691e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -9.83e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 449
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11008
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1161
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4086
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6394
bin: 9.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6116
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.328614008941878e-5
allele num: 42944
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4346
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8777
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6680
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.409816e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.639e-1

MQ
type: SiteQuality
SIO_000300: 5.884e1

QD
type: SiteQuality
SIO_000300: 3.139e1

GenotypeQuality
all individuals: 2631
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5028
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6684
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2420
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1363
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2985
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4303
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.400268830108972e-5
allele num: 41662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5958
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8084
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.676e1

VQSLOD
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.379244e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

MQRankSum
type: SiteQuality
SIO_000300: -4.91e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.208e0

GenotypeQuality
all individuals: 2029
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4211
bin: 6.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 573
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variant carriers: 0

GenotypeQuality
all individuals: 1508
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6519
bin: 9.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7925
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.435104465981591e-5
allele num: 41066
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.185817621249852e-4
allele num: 8433
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 563
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8756
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.994e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.266e-1

DP
type: SiteQuality
SIO_000300: 1.641489e6

GenotypeQuality
all individuals: 922
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4220
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1838
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6522
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4141
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6042
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 561
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41184
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.522068095838588e-4
allele num: 7930
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8777
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.32e0

VQSLOD
type: SiteQuality
SIO_000300: -5.105e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.488e0

DP
type: SiteQuality
SIO_000300: 1.652097e6

FS
type: SiteQuality
SIO_000300: 4.72e0

MQRankSum
type: SiteQuality
SIO_000300: 9.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.29e-1

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1539
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34944
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4808
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2119
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6453
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.334133813621506e-4
allele num: 44973
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8941
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8205
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.16e-2

MQ
type: SiteQuality
SIO_000300: 5.944e1

QD
type: SiteQuality
SIO_000300: 1.597e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.438e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e-1

FS
type: SiteQuality
SIO_000300: 8.28e-1

DP
type: SiteQuality
SIO_000300: 1.796211e6

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1608
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1551
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.519756838905775e-4
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8363
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9699
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4479
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46984
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 615
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.19e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

FS
type: SiteQuality
SIO_000300: 6.314e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.11e-1

DP
type: SiteQuality
SIO_000300: 1.858203e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.25e-1

QD
type: SiteQuality
SIO_000300: 1.445e1

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5222
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6532
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39855
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1556
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8409
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47385
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4495
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9843
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.589e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.664e0

VQSLOD
type: SiteQuality
SIO_000300: 2.47e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

QD
type: SiteQuality
SIO_000300: 1.194e1

DP
type: SiteQuality
SIO_000300: 1.873752e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
all individuals: 140
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6530
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40443
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.102960969044415e-5
allele num: 47552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9200
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6615
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4507
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9917
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.099999999999999e-2

QD
type: SiteQuality
SIO_000300: 2.922e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-2

DP
type: SiteQuality
SIO_000300: 1.880461e6

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1629
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5247
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1557
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9956
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.183992422448496e-4
allele num: 8446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9213
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47629
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.883803e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.87e-2

QD
type: SiteQuality
SIO_000300: 3.397e1

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1557
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2171
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9951
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9207
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8435
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.10017851517379e-5
allele num: 47615
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4509
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6622
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.8808e6

FS
type: SiteQuality
SIO_000300: 7.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.639999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.14e-1

QD
type: SiteQuality
SIO_000300: 1.231e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQ
type: SiteQuality
SIO_000300: 5.929e1

GenotypeQuality
all individuals: 122
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1551
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2160
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5159
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9203
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4505
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8417
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47559
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.510802235987309e-4
allele num: 6619
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9921
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.315e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.285e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.875294e6

QD
type: SiteQuality
SIO_000300: 1.228e1

GenotypeQuality
all individuals: 2121
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1538
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.087547580206634e-4
allele num: 9195
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6617
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9861
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.107259509008534e-5
allele num: 47455
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4501
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 1.861673e6

FS
type: SiteQuality
SIO_000300: 7.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.419999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.561e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

QD
type: SiteQuality
SIO_000300: 1.157e1

GenotypeQuality
all individuals: 355
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1864
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 934
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3719
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1372
bin: 7.25e1
variant carriers: 1

South Asian
type: Population
allele count: 2
allele frequency: 2.132878319291884e-4
allele num: 9377
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6569
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46664
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7879
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9133
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-2

DP
type: SiteQuality
SIO_000300: 1.710897e6

QD
type: SiteQuality
SIO_000300: 2.826e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.66e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.414e0

VQSLOD
type: SiteQuality
SIO_000300: -4.412e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

GenotypeQuality
all individuals: 2173
bin: 2.25e1
variant carriers: 868

GenotypeQuality
all individuals: 2180
bin: 9.25e1
variant carriers: 2154

GenotypeQuality
all individuals: 2956
bin: 3.75e1
variant carriers: 2888

GenotypeQuality
all individuals: 552
bin: 1.75e1
variant carriers: 451

GenotypeQuality
all individuals: 1524
bin: 7.25e1
variant carriers: 1490

African
type: Population
allele count: 3921
allele frequency: 5.248995983935743e-1
allele num: 7470
num of homozygotes: 745

European (Finnish)
type: Population
allele count: 4351
allele frequency: 9.83499095840868e-1
allele num: 4424
num of homozygotes: 1156

European (Non-Finnish)
type: Population
allele count: 45186
allele frequency: 9.760870974013349e-1
allele num: 46293
num of homozygotes: 13706

East Asian
type: Population
allele count: 6390
allele frequency: 9.791602819491265e-1
allele num: 6526
num of homozygotes: 2197

Other
type: Population
allele count: 583
allele frequency: 9.588815789473685e-1
allele num: 608
num of homozygotes: 161

Latino
type: Population
allele count: 8797
allele frequency: 9.670220951962185e-1
allele num: 9097
num of homozygotes: 3258

South Asian
type: Population
allele count: 8245
allele frequency: 8.98539668700959e-1
allele num: 9176
num of homozygotes: 1313

DP
type: SiteQuality
SIO_000300: 2.017886e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.035e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.6e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.36e-1

QD
type: SiteQuality
SIO_000300: 2.955e1

GenotypeQuality
all individuals: 1671
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3412
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3886
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 903
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7076
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8573
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 551
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4031
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.676445934618609e-4
allele num: 5965
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41327
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.558e0

DP
type: SiteQuality
SIO_000300: 1.355785e6

QD
type: SiteQuality
SIO_000300: 1.502e1

MQ
type: SiteQuality
SIO_000300: 5.944e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

GenotypeQuality
all individuals: 620
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2820
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4461
bin: 3.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3977
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 40703
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8505
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6924
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.349345567399811e-4
allele num: 7411
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.222e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.584e0

DP
type: SiteQuality
SIO_000300: 1.305083e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

GenotypeQuality
all individuals: 3732
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variant carriers: 0

GenotypeQuality
all individuals: 396
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variant carriers: 1

GenotypeQuality
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bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 263
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GenotypeQuality
all individuals: 193
bin: 5.75e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 5898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7402
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 9.819565484227323e-5
allele num: 40735
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Finnish)
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allele count: 17
allele frequency: 4.27243025885901e-3
allele num: 3979
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6920
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Other
type: Population
allele count: 1
allele frequency: 1.851851851851852e-3
allele num: 540
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.28e-2

DP
type: SiteQuality
SIO_000300: 1.30272e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

VQSLOD
type: SiteQuality
SIO_000300: -7.499e-1

QD
type: SiteQuality
SIO_000300: 2.167e1

FS
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MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: -3.45e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 4.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7023
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African
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allele num: 6727
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Other
type: Population
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allele frequency: 0.0e0
allele num: 531
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8389
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.523022581052101e-5
allele num: 39635
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3880
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East Asian
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allele frequency: 0.0e0
allele num: 5759
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.234178e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.036e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9413
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4453
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 613
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6575
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.114477829699955e-5
allele num: 47293
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Latino
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allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 3.129e0

MQRankSum
type: SiteQuality
SIO_000300: -4.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

DP
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MQ
type: SiteQuality
SIO_000300: 5.938e1

VQSLOD
type: SiteQuality
SIO_000300: 5.81e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.22e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.67e-1

Latino
type: Population
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allele frequency: 0.0e0
allele num: 9170
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.112423160607533e-5
allele num: 47339
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South Asian
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African
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allele frequency: 0.0e0
allele num: 8444
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4455
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East Asian
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allele num: 6578
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VQSLOD
type: SiteQuality
SIO_000300: 8.31e-1

DP
type: SiteQuality
SIO_000300: 2.315047e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.5e-3

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.17e-1

FS
type: SiteQuality
SIO_000300: 3.391e0

MQRankSum
type: SiteQuality
SIO_000300: -7.32e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

Latino
type: Population
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African
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allele frequency: 0.0e0
allele num: 8443
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.111620246214921e-5
allele num: 47357
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9456
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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allele num: 614
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VQSLOD
type: SiteQuality
SIO_000300: -1.634e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-2

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.331577e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.13e-1

QD
type: SiteQuality
SIO_000300: 1.972e1

Latino
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allele frequency: 0.0e0
allele num: 9178
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4464
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South Asian
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allele frequency: 1.057529610829103e-4
allele num: 9456
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 614
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47357
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African
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DP
type: SiteQuality
SIO_000300: 2.331577e6

QD
type: SiteQuality
SIO_000300: 1.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.47e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 615
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.110283411062106e-5
allele num: 47387
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
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South Asian
type: Population
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.339348e6

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.921e1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.51e-1

South Asian
type: Population
allele count: 3
allele frequency: 3.158559696778269e-4
allele num: 9498
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Other
type: Population
allele count: 0
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allele num: 616
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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allele num: 6598
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Latino
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QD
type: SiteQuality
SIO_000300: 1.512e1

MQRankSum
type: SiteQuality
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DP
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.02e-1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.678e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.05e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47456
num of homozygotes: 0

African
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allele frequency: 2.365744026496333e-4
allele num: 8454
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Latino
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South Asian
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East Asian
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allele count: 0
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Other
type: Population
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.57e-1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.358764e6

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

FS
type: SiteQuality
SIO_000300: 2.087e0

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 9.1e-1

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-2

QD
type: SiteQuality
SIO_000300: 1.085e1

African
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allele count: 0
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European (Non-Finnish)
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allele count: 1
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allele num: 47516
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East Asian
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European (Finnish)
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allele count: 0
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num of homozygotes: 0

Latino
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South Asian
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
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FS
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.370014e6

Latino
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African
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East Asian
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4480
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.102342008998024e-5
allele num: 47566
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.69e-1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.67e-1

FS
type: SiteQuality
SIO_000300: 1.77e0

MQRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e0

African
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Other
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East Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47712
num of homozygotes: 0

South Asian
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

FS
type: SiteQuality
SIO_000300: 9.05e-1

QD
type: SiteQuality
SIO_000300: 9.01e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.942e0

MQRankSum
type: SiteQuality
SIO_000300: 6.44e-1

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

African
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num of homozygotes: 0

East Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 3.770739064856712e-4
allele num: 47736
num of homozygotes: 0

South Asian
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Other
type: Population
allele count: 1
allele frequency: 1.602564102564103e-3
allele num: 624
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FS
type: SiteQuality
SIO_000300: 1.124e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.254e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

QD
type: SiteQuality
SIO_000300: 2.062e1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.399903e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.395e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.22e-1

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 624
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9830
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.083306250677066e-4
allele num: 9231
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47755
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.402503e6

MQRankSum
type: SiteQuality
SIO_000300: 5.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.69e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.213e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e-2

MQ
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SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 2.119e1

GenotypeQuality
all individuals: 121
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.256334017337409e-4
allele num: 47758
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.53440150801131e-4
allele num: 8488
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.083071591032167e-4
allele num: 9233
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4495
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9835
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.556999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 2.404049e6

FS
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.68e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.68e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.83e-1

QD
type: SiteQuality
SIO_000300: 1.246e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.81e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 6
allele frequency: 6.497022198159177e-4
allele num: 9235
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4496
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9843
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.89e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-2

DP
type: SiteQuality
SIO_000300: 2.404246e6

MQ
type: SiteQuality
SIO_000300: 5.976e1

VQSLOD
type: SiteQuality
SIO_000300: 3.87e-1

FS
type: SiteQuality
SIO_000300: 2.477e0

QD
type: SiteQuality
SIO_000300: 1.374e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4502
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9884
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9246
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.67381525264149e-4
allele num: 47795
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.307e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.09e-1

FS
type: SiteQuality
SIO_000300: 3.241e0

QD
type: SiteQuality
SIO_000300: 2.003e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.99e-1

DP
type: SiteQuality
SIO_000300: 2.407896e6

VQSLOD
type: SiteQuality
SIO_000300: 4.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8495
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.277069863787583e-5
allele num: 47793
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9243
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4501
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.18e-2

MQ
type: SiteQuality
SIO_000300: 5.987e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.63e-1

FS
type: SiteQuality
SIO_000300: 1.629e0

VQSLOD
type: SiteQuality
SIO_000300: -3.795e-1

DP
type: SiteQuality
SIO_000300: 2.407457e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.085e0

QD
type: SiteQuality
SIO_000300: 1.44e1

GenotypeQuality
all individuals: 1807
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4503
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47740
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9836
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8483
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.01659125188537e-4
allele num: 6630
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.423e1

FS
type: SiteQuality
SIO_000300: 5.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.61e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

MQRankSum
type: SiteQuality
SIO_000300: -6.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.388e0

DP
type: SiteQuality
SIO_000300: 2.400936e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.13e-2

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.062474479379339e-4
allele num: 9796
num of homozygotes: 0

Other
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allele count: 1
allele frequency: 1.605136436597111e-3
allele num: 623
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.097447406506282e-5
allele num: 47677
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.509661835748792e-4
allele num: 6624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9228
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4498
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.056e0

DP
type: SiteQuality
SIO_000300: 2.387924e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.81e-1

QD
type: SiteQuality
SIO_000300: 1.884e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.84e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.886e0

VQSLOD
type: SiteQuality
SIO_000300: -1.885e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e0

GenotypeQuality
all individuals: 2054
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9227
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4498
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.097359424484574e-5
allele num: 47679
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8473
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.02e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.736e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.94e-1

QD
type: SiteQuality
SIO_000300: 1.603e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 5.89e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

DP
type: SiteQuality
SIO_000300: 2.386642e6

GenotypeQuality
all individuals: 2558
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.098988287645355e-5
allele num: 47642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4496
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8469
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.64e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 3.175e1

DP
type: SiteQuality
SIO_000300: 2.370455e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9715
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.050530517911545e-4
allele num: 47595
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4491
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9207
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.04e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.336602e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

QD
type: SiteQuality
SIO_000300: 1.306e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.105662125455349e-5
allele num: 47491
num of homozygotes: 0

East Asian
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allele count: 0
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num of homozygotes: 0

South Asian
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allele count: 0
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Latino
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8451
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4482
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.116e0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

DP
type: SiteQuality
SIO_000300: 2.310415e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.596e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Latino
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allele count: 2
allele frequency: 2.185553491421703e-4
allele num: 9151
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4451
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47294
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9483
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.159999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

FS
type: SiteQuality
SIO_000300: 8.984e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.08e-1

DP
type: SiteQuality
SIO_000300: 2.282506e6

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.39e-2

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46410
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 1.319783555496899e-4
allele num: 7577
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.6487e1

QD
type: SiteQuality
SIO_000300: 1.014e1

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

DP
type: SiteQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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South Asian
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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European (Non-Finnish)
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allele frequency: 2.151416707902153e-5
allele num: 46481
num of homozygotes: 0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 1.181753722524226e-4
allele num: 8462
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.2e-2

MQ
type: SiteQuality
SIO_000300: 5.961e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.335e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.58e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

DP
type: SiteQuality
SIO_000300: 2.12801e6

QD
type: SiteQuality
SIO_000300: 1.766e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

GenotypeQuality
all individuals: 1513
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.179384361363368e-4
allele num: 8479
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 601
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6619
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47185
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9156
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.134e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.113e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

QD
type: SiteQuality
SIO_000300: 1.378e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.149798e6

VQSLOD
type: SiteQuality
SIO_000300: -3.452e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.682e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47212
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8480
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South Asian
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allele count: 1
allele frequency: 1.216249087813184e-4
allele num: 8222
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.513e0

FS
type: SiteQuality
SIO_000300: 9.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

DP
type: SiteQuality
SIO_000300: 2.152755e6

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.242e1

MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9183
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4525
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.110996179096916e-5
allele num: 47371
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.979e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.44e-2

FS
type: SiteQuality
SIO_000300: 2.193e0

VQSLOD
type: SiteQuality
SIO_000300: -2.792e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.932e0

MQRankSum
type: SiteQuality
SIO_000300: 2.9e0

DP
type: SiteQuality
SIO_000300: 2.165064e6

QD
type: SiteQuality
SIO_000300: 2.372e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.221992358193831e-5
allele num: 47371
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4525
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9183
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.193e0

VQSLOD
type: SiteQuality
SIO_000300: -2.792e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.36e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

MQRankSum
type: SiteQuality
SIO_000300: 2.9e0

QD
type: SiteQuality
SIO_000300: 2.372e1

DP
type: SiteQuality
SIO_000300: 2.165064e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.932e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.44e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 5.413012882970661e-4
allele num: 9237
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.351281448389372e-4
allele num: 8506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.094635638130747e-5
allele num: 47741
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9521
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.35e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.572e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.44e0

DP
type: SiteQuality
SIO_000300: 2.196177e6

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9881
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.253054319904768e-4
allele num: 47883
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9257
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.967e1

DP
type: SiteQuality
SIO_000300: 2.207594e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.295e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

FS
type: SiteQuality
SIO_000300: 5.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.02e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

VQSLOD
type: SiteQuality
SIO_000300: 2.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8505
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9249
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47869
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.508068164681044e-4
allele num: 6631
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9835
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.739e0

QD
type: SiteQuality
SIO_000300: 3.131e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.739e0

DP
type: SiteQuality
SIO_000300: 2.205414e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.905e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.39e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8503
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47821
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.508295625942685e-4
allele num: 6630
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9243
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 3.212e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.048e0

DP
type: SiteQuality
SIO_000300: 2.202512e6

MQRankSum
type: SiteQuality
SIO_000300: 5.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.967e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.922e0

QD
type: SiteQuality
SIO_000300: 4.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

GenotypeQuality
all individuals: 2463
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47525
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8493
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9204
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9187
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.512172992590352e-4
allele num: 6613
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4523
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.173565e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.88e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

VQSLOD
type: SiteQuality
SIO_000300: -4.459e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.273e0

MQRankSum
type: SiteQuality
SIO_000300: -8.22e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 1.466e1

GenotypeQuality
all individuals: 5122
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.221012198725254e-5
allele num: 47382
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9037
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8487
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.133e0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.160514e6

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 619
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9184
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6599
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.111887816519186e-5
allele num: 47351
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9009
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.246e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

VQSLOD
type: SiteQuality
SIO_000300: 4.25e-1

DP
type: SiteQuality
SIO_000300: 2.157272e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.283e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9157
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4514
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.127141568981064e-4
allele num: 8872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47199
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.92e-2

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.143991e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 3.2e0

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47059
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 611
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9128
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.522997258604935e-4
allele num: 6566
num of homozygotes: 0

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.1219e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.971e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.131588e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

QD
type: SiteQuality
SIO_000300: 1.479e1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.553e0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8988
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8250
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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African
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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FS
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VQSLOD
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DP
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QD
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BaseQRankSum
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MQ
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 1.185536455245999e-4
allele num: 8435
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East Asian
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European (Non-Finnish)
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South Asian
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European (Finnish)
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MQ
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ClippingRankSum
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FS
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DP
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QD
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MQRankSum
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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DP
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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MQ
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QD
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VQSLOD
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FS
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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MQRankSum
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VQSLOD
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MQ
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QD
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DP
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.211997876482038e-5
allele num: 45208
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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Latino
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East Asian
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South Asian
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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QD
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MQ
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FS
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DP
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VQSLOD
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.232591368801768e-5
allele num: 44791
num of homozygotes: 0

East Asian
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Latino
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Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 7323
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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InbreedingCoeff
type: SiteQuality
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QD
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ClippingRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 577
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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allele num: 8678
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South Asian
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African
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East Asian
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FS
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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DP
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VQSLOD
type: SiteQuality
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QD
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ReadPosRankSum
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MQ
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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num of homozygotes: 0

Other
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European (Non-Finnish)
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allele frequency: 2.164221096827252e-5
allele num: 46206
num of homozygotes: 0

East Asian
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South Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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QD
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ReadPosRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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VQSLOD
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MQ
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FS
type: SiteQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 9079
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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European (Non-Finnish)
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East Asian
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allele frequency: 6.072567177774404e-4
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South Asian
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Other
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DP
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ClippingRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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FS
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ReadPosRankSum
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MQ
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QD
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele frequency: 1.100473203477495e-4
allele num: 9087
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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African
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Other
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BaseQRankSum
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MQ
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QD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeQuality
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Other
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South Asian
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East Asian
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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BaseQRankSum
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QD
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FS
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
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DP
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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num of homozygotes: 0

Latino
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allele num: 9094
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East Asian
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Other
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South Asian
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African
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allele frequency: 1.439366678661389e-3
allele num: 8337
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European (Finnish)
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MQ
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BaseQRankSum
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ClippingRankSum
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DP
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FS
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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South Asian
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East Asian
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European (Finnish)
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African
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Other
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Latino
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allele frequency: 2.198526986918764e-4
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European (Non-Finnish)
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ReadPosRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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MQ
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FS
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VQSLOD
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MQRankSum
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QD
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

Latino
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Other
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InbreedingCoeff
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FS
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DP
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VQSLOD
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MQ
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QD
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GenotypeQuality
all individuals: 1850
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4600
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 605
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9117
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8371
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4475
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.512630464377553e-4
allele num: 6611
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46869
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.67e-2

DP
type: SiteQuality
SIO_000300: 1.688824e6

QD
type: SiteQuality
SIO_000300: 2.94e1

VQSLOD
type: SiteQuality
SIO_000300: -6.67e-2

GenotypeQuality
all individuals: 563
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9122
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.511258878645912e-4
allele num: 6617
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8385
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4479
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.849e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.25e-2

DP
type: SiteQuality
SIO_000300: 1.703977e6

VQSLOD
type: SiteQuality
SIO_000300: 8.169999999999999e-1

GenotypeQuality
all individuals: 563
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4479
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.912045889101338e-4
allele num: 47070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6617
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9123
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9199
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.71e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.278e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 2.007e1

DP
type: SiteQuality
SIO_000300: 1.706081e6

GenotypeQuality
all individuals: 418
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8383
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.096250822188117e-4
allele num: 9122
num of homozygotes: 0