22-39144722-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144722
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144722
    reference: chr 22
allele count: 4
allele frequency: 3.299023489047242e-5
allele num: 121248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.681G>A
  hgvsp: ENST00000405510.1:c.681G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.648G>A
  hgvsp: ENST00000411587.2:c.648G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.681G>A
  hgvsp: ENST00000406622.1:c.681G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.251G>A
  hgvsp: ENST00000430185.1:c.251G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.681G>A
  hgvsp: ENST00000216064.4:c.681G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.543G>A
  hgvsp: ENST00000438058.1:c.543G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.744G>A
  hgvsp: ENST00000405018.1:c.744G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.176C>T
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7422
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6400
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1870
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6418
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3680
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr248Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

22-39144731-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144731
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144731
    reference: chr 22
allele count: 12
allele frequency: 9.895764612745745e-5
allele num: 121264
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.534G>A
  hgvsp: ENST00000438058.1:c.534G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.672G>A
  hgvsp: ENST00000406622.1:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.639G>A
  hgvsp: ENST00000411587.2:c.639G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.672G>A
  hgvsp: ENST00000405510.1:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.185C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.672G>A
  hgvsp: ENST00000216064.4:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.242G>A
  hgvsp: ENST00000430185.1:c.242G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.735G>A
  hgvsp: ENST00000405018.1:c.735G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7423
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2931
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1870
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6516
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr245Thr
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

22-39144732-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144732
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144732
    reference: chr 22
allele count: 1
allele frequency: 8.246742536698004e-6
allele num: 121260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.671C>T
  hgvsp: ENSP00000216064.4:p.Thr224Met
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.241C>T
  hgvsp: ENSP00000403694.1:p.Thr81Met
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.186G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.734C>T
  hgvsp: ENSP00000385616.1:p.Thr245Met
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.671C>T
  hgvsp: ENSP00000385740.1:p.Thr224Met
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.671C>T
  hgvsp: ENSP00000383992.1:p.Thr224Met
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.533C>T
  hgvsp: ENSP00000406941.1:p.Thr178Met
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.638C>T
  hgvsp: ENSP00000395601.2:p.Thr213Met
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr245Met
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP

22-39144734-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144734
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144734
    reference: chr 22
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.732G>C
  hgvsp: ENST00000405018.1:c.732G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.239G>C
  hgvsp: ENST00000430185.1:c.239G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.188C>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.669G>C
  hgvsp: ENST00000216064.4:c.669G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.669G>C
  hgvsp: ENST00000406622.1:c.669G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.669G>C
  hgvsp: ENST00000405510.1:c.669G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.531G>C
  hgvsp: ENST00000438058.1:c.531G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.636G>C
  hgvsp: ENST00000411587.2:c.636G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3004
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3680
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3424
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu244Leu
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

22-39144742-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144742
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144742
    reference: chr 22
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.523C>T
  hgvsp: ENSP00000406941.1:p.Leu175Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.661C>T
  hgvsp: ENSP00000216064.4:p.Leu221Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.196G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.231C>T
  hgvsp: ENSP00000403694.1:p.Leu78Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.661C>T
  hgvsp: ENSP00000385740.1:p.Leu221Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.628C>T
  hgvsp: ENSP00000395601.2:p.Leu210Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.724C>T
  hgvsp: ENSP00000385616.1:p.Leu242Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.661C>T
  hgvsp: ENSP00000383992.1:p.Leu221Phe
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7425
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3424
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1832
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6450
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu242Phe
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

22-39144744-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144744
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144744
    reference: chr 22
allele count: 1
allele frequency: 8.247966876165026e-6
allele num: 121242
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.722T>C
  hgvsp: ENSP00000385616.1:p.Leu241Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.229T>C
  hgvsp: ENSP00000403694.1:p.Leu77Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.659T>C
  hgvsp: ENSP00000216064.4:p.Leu220Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.521T>C
  hgvsp: ENSP00000406941.1:p.Leu174Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.626T>C
  hgvsp: ENSP00000395601.2:p.Leu209Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.659T>C
  hgvsp: ENSP00000385740.1:p.Leu220Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.659T>C
  hgvsp: ENSP00000383992.1:p.Leu220Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.198A>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7425
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6471
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3669
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37178
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Leu241Pro
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

22-39144746-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144746
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144746
    reference: chr 22
allele count: 41
allele frequency: 3.381722203893105e-4
allele num: 121240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.624G>A
  hgvsp: ENST00000411587.2:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.657G>A
  hgvsp: ENST00000406622.1:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.657G>A
  hgvsp: ENST00000405510.1:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.720G>A
  hgvsp: ENST00000405018.1:c.720G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.519G>A
  hgvsp: ENST00000438058.1:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.200C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.227G>A
  hgvsp: ENST00000430185.1:c.227G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.657G>A
  hgvsp: ENST00000216064.4:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7112
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5500
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 9.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 6397
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3003
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro240Pro
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

22-39144747-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144747
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144747
    reference: chr 22
allele count: 380
allele frequency: 3.1341757117878e-3
allele num: 121244
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.201G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.518C>T
  hgvsp: ENSP00000406941.1:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.656C>T
  hgvsp: ENSP00000383992.1:p.Pro219Leu
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.719C>T
  hgvsp: ENSP00000385616.1:p.Pro240Leu
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.226C>T
  hgvsp: ENSP00000403694.1:p.Pro76Leu
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.656C>T
  hgvsp: ENSP00000385740.1:p.Pro219Leu
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.656C>T
  hgvsp: ENSP00000216064.4:p.Pro219Leu
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.623C>T
  hgvsp: ENSP00000395601.2:p.Pro208Leu
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5489
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6562
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7110
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5278
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6387
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6679
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7408
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 9.75e1
  variant carriers: 301
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2928
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37204
  bin: 9.75e1
  variant carriers: 376
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6503
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1870
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro240Leu
num of homozygotes: 4
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

22-39144747-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144747
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144747
    reference: chr 22
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.623C>A
  hgvsp: ENSP00000395601.2:p.Pro208Gln
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.656C>A
  hgvsp: ENSP00000216064.4:p.Pro219Gln
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.226C>A
  hgvsp: ENSP00000403694.1:p.Pro76Gln
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.518C>A
  hgvsp: ENSP00000406941.1:p.Pro173Gln
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.719C>A
  hgvsp: ENSP00000385616.1:p.Pro240Gln
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.656C>A
  hgvsp: ENSP00000383992.1:p.Pro219Gln
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.201G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.656C>A
  hgvsp: ENSP00000385740.1:p.Pro219Gln
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5489
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7110
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6679
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3669
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2928
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro240Gln
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

22-39144767-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144767
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144767
    reference: chr 22
allele count: 3
allele frequency: 2.474839135456195e-5
allele num: 121220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.498G>A
  hgvsp: ENST00000438058.1:c.498G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.206G>A
  hgvsp: ENST00000430185.1:c.206G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.636G>A
  hgvsp: ENST00000406622.1:c.636G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.636G>A
  hgvsp: ENST00000216064.4:c.636G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.636G>A
  hgvsp: ENST00000405510.1:c.636G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.603G>A
  hgvsp: ENST00000411587.2:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.699G>A
  hgvsp: ENST00000405018.1:c.699G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.221C>T
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5516
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37030
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Thr233Thr
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

22-39144768-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144768
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144768
    reference: chr 22
allele count: 38
allele frequency: 3.135313531353136e-4
allele num: 121200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.205C>T
  hgvsp: ENSP00000403694.1:p.Thr69Met
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.635C>T
  hgvsp: ENSP00000385740.1:p.Thr212Met
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.602C>T
  hgvsp: ENSP00000395601.2:p.Thr201Met
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.222G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.635C>T
  hgvsp: ENSP00000383992.1:p.Thr212Met
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.497C>T
  hgvsp: ENSP00000406941.1:p.Thr166Met
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.698C>T
  hgvsp: ENSP00000385616.1:p.Thr233Met
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.635C>T
  hgvsp: ENSP00000216064.4:p.Thr212Met
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5515
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 9.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3429
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3024
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2944
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr233Met
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

22-39144779-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144779
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144779
    reference: chr 22
allele count: 5
allele frequency: 4.127115146512587e-5
allele num: 121150
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.233C>T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.687G>A
  hgvsp: ENST00000405018.1:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.624G>A
  hgvsp: ENST00000216064.4:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.624G>A
  hgvsp: ENST00000406622.1:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.591G>A
  hgvsp: ENST00000411587.2:c.591G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.194G>A
  hgvsp: ENST00000430185.1:c.194G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.486G>A
  hgvsp: ENST00000438058.1:c.486G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.624G>A
  hgvsp: ENST00000405510.1:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7447
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6691
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6253
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser229Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

22-39144783-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144783
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144783
    reference: chr 22
allele count: 2
allele frequency: 1.651009592365732e-5
allele num: 121138
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.620T>C
  hgvsp: ENSP00000383992.1:p.Phe207Ser
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.587T>C
  hgvsp: ENSP00000395601.2:p.Phe196Ser
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.620T>C
  hgvsp: ENSP00000385740.1:p.Phe207Ser
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.190T>C
  hgvsp: ENSP00000403694.1:p.Phe64Ser
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.482T>C
  hgvsp: ENSP00000406941.1:p.Phe161Ser
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.683T>C
  hgvsp: ENSP00000385616.1:p.Phe228Ser
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.620T>C
  hgvsp: ENSP00000216064.4:p.Phe207Ser
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.237A>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7447
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3621
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3430
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6244
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Phe228Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS

http://identifiers.org/exac.variant/22-39144786-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144786
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144786
    reference: chr 22
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.479G>T
  hgvsp: ENSP00000406941.1:p.Arg160Leu
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.680G>T
  hgvsp: ENSP00000385616.1:p.Arg227Leu
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.617G>T
  hgvsp: ENSP00000385740.1:p.Arg206Leu
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.617G>T
  hgvsp: ENSP00000216064.4:p.Arg206Leu
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.584G>T
  hgvsp: ENSP00000395601.2:p.Arg195Leu
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.187G>T
  hgvsp: ENSP00000403694.1:p.Arg63Leu
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.240C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.617G>T
  hgvsp: ENSP00000383992.1:p.Arg206Leu
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6370
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7447
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37006
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1820
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg227Leu
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

22-39144786-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144786
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144786
    reference: chr 22
allele count: 2
allele frequency: 1.651254953764861e-5
allele num: 121120
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.680G>A
  hgvsp: ENSP00000385616.1:p.Arg227His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.617G>A
  hgvsp: ENSP00000385740.1:p.Arg206His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.584G>A
  hgvsp: ENSP00000395601.2:p.Arg195His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.240C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.187G>A
  hgvsp: ENSP00000403694.1:p.Arg63His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.617G>A
  hgvsp: ENSP00000383992.1:p.Arg206His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.617G>A
  hgvsp: ENSP00000216064.4:p.Arg206His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.479G>A
  hgvsp: ENSP00000406941.1:p.Arg160His
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7144
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7447
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6370
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3430
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg227His
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

22-39144787-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144787
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144787
    reference: chr 22
allele count: 1
allele frequency: 8.257092842751923e-6
allele num: 121108
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.616C>T
  hgvsp: ENSP00000385740.1:p.Arg206Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.616C>T
  hgvsp: ENSP00000216064.4:p.Arg206Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.478C>T
  hgvsp: ENSP00000406941.1:p.Arg160Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.186C>T
  hgvsp: ENSP00000403694.1:p.Arg63Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.241G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.583C>T
  hgvsp: ENSP00000395601.2:p.Arg195Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.616C>T
  hgvsp: ENSP00000383992.1:p.Arg206Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.679C>T
  hgvsp: ENSP00000385616.1:p.Arg227Cys
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3953
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3429
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg227Cys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD

22-39144787-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144787
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144787
    reference: chr 22
allele count: 13
allele frequency: 1.07342206955775e-4
allele num: 121108
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.679C>A
  hgvsp: ENSP00000385616.1:p.Arg227Ser
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.616C>A
  hgvsp: ENSP00000385740.1:p.Arg206Ser
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.478C>A
  hgvsp: ENSP00000406941.1:p.Arg160Ser
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.616C>A
  hgvsp: ENSP00000383992.1:p.Arg206Ser
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.186C>A
  hgvsp: ENSP00000403694.1:p.Arg63Ser
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.616C>A
  hgvsp: ENSP00000216064.4:p.Arg206Ser
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.241G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.583C>A
  hgvsp: ENSP00000395601.2:p.Arg195Ser
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3953
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6601
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3429
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg227Ser
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

22-39144792-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144792
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144792
    reference: chr 22
allele count: 1
allele frequency: 8.26296045347127e-6
allele num: 121022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-4C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-4C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-4C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-4C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.246G>A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-4C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-4C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-4C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6693
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5914
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3020
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
hgvs: c.678-4C>T
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

22-39144797-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144797
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144797
    reference: chr 22
allele count: 7
allele frequency: 5.786462983169659e-5
allele num: 120972
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-9G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.251C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-9G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-9G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-9G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-9G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-9G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-9G>A
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3428
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3507
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

22-39144798-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144798
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144798
    reference: chr 22
allele count: 25
allele frequency: 2.066525591852929e-4
allele num: 120976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-10C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-10C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-10C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.252G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-10C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-10C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-10C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-10C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5517
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1803
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

22-39144799-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144799
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144799
    reference: chr 22
allele count: 12
allele frequency: 9.921783275180659e-5
allele num: 120946
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.253C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-11G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-11G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-11G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-11G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-11G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-11G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-11G>A
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7450
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1882
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2928
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36988
  bin: 9.75e1
  variant carriers: 12
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

22-39144807-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144807
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144807
    reference: chr 22
allele count: 115
allele frequency: 9.511836032489124e-4
allele num: 120902
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-19G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-19G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-19G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.261C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-19G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-19G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-19G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-19G>A
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6691
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6542
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6197
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 9.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 8.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 7129
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7444
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5783
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3009
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3425
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

22-39144810-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144810
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144810
    reference: chr 22
allele count: 1
allele frequency: 8.272530236098013e-6
allele num: 120882
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-22C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-22C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-22C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-22C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-22C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-22C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.264G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-22C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6687
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7455
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5524
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1788
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5659
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/22-39144812-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144812
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144812
    reference: chr 22
allele count: 3
allele frequency: 2.483155925637757e-5
allele num: 120814
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-24G>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-24G>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-24G>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-24G>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-24G>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.266C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-24G>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-24G>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6688
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6533
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2906
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

22-39144812-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144812
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144812
    reference: chr 22
allele count: 13
allele frequency: 1.076034234443028e-4
allele num: 120814
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-24G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-24G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-24G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-24G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.266C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-24G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-24G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-24G>A
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6533
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6688
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5365
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3358
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3013
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

22-39144813-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144813
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144813
    reference: chr 22
allele count: 11
allele frequency: 9.10324737660962e-5
allele num: 120836
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-25C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-25C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-25C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.267G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-25C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-25C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-25C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-25C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6532
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6686
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7457
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5523
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2904
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36937
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3015
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

22-39144814-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144814
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144814
    reference: chr 22
allele count: 1
allele frequency: 8.27417299640901e-6
allele num: 120858
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-26C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.268G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-26C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-26C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-26C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-26C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-26C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-26C>G
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7458
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36934
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3427
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2909
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1778
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

22-39144820-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144820
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144820
    reference: chr 22
allele count: 1
allele frequency: 8.276090374906894e-6
allele num: 120830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-32C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-32C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-32C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.274G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-32C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-32C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-32C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-32C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6491
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7119
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7452
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6684
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3010
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1877
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36931
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2905
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

22-39144821-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144821
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144821
    reference: chr 22
allele count: 1
allele frequency: 8.277597510098669e-6
allele num: 120808
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-33G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.275C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-33G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-33G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-33G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-33G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-33G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-33G>A
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6056
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1757
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3002
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3330
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3424
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

22-39144822-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144822
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144822
    reference: chr 22
allele count: 29
allele frequency: 2.400463537786607e-4
allele num: 120810
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.276G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-34C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-34C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-34C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-34C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-34C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-34C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-34C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5525
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4596
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6471
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6687
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5188
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum

22-39144833-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144833
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144833
    reference: chr 22
allele count: 3
allele frequency: 2.485007123687088e-5
allele num: 120724
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-45C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-45C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.287G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-45C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-45C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-45C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-45C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-45C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7434
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5637
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7088
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4012
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

22-39144840-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39144840
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39144840
    reference: chr 22
allele count: 1
allele frequency: 8.290499088045101e-6
allele num: 120620
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.615-52G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.615-52G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.185-52G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.582-52G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000225450
  ensembl transcript: ENST00000416406
  gene symbol: RP3-508I15.14
  hgvsc: ENST00000416406.1:n.294C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.477-52G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.678-52G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.615-52G>A
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7075
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7425
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 906
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2794
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD

22-39145721-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145721
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145721
    reference: chr 22
allele count: 1100
allele frequency: 9.686679934482819e-3
allele num: 113558
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.184+50G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.677+50G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.614+50G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.476+50G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.614+50G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.614+50G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.581+50G>A
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 3.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 3.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10871
  bin: 1.25e1
  variant carriers: 228
genotype depth: GenotypeDepth
  all individuals: 10883
  bin: 2.75e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 16336
  bin: 2.25e1
  variant carriers: 279
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 7.5e0
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15470
  bin: 1.75e1
  variant carriers: 365
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19825
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4305
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 7.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3621
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1756
  bin: 9.75e1
  variant carriers: 1011
genotype quality: GenotypeQuality
  all individuals: 2367
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 4.25e1
  variant carriers: 5
num of homozygotes: 30
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS

http://identifiers.org/exac.variant/22-39145728-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145728
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145728
    reference: chr 22
allele count: 2
allele frequency: 1.752541184717841e-5
allele num: 114120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.614+43G>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.614+43G>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.677+43G>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.581+43G>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.184+43G>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.476+43G>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.614+43G>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10029
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11505
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21647
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27806
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4246
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3859
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2829
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

22-39145737-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145737
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145737
    reference: chr 22
allele count: 1
allele frequency: 8.708373972411871e-6
allele num: 114832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.614+34A>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.476+34A>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.614+34A>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.581+34A>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.184+34A>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.614+34A>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.677+34A>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12729
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8426
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2998
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3562
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1584
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1946
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

22-39145739-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145739
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145739
    reference: chr 22
allele count: 3
allele frequency: 2.612830740824609e-5
allele num: 114818
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.614+32G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.476+32G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.677+32G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.184+32G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.614+32G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.581+32G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.614+32G>A
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13176
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29128
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37574
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1793
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3607
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 3187
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

22-39145740-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145740
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145740
    reference: chr 22
allele count: 3
allele frequency: 2.607380625423699e-5
allele num: 115058
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.614+31C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.614+31C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.184+31C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.476+31C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.614+31C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.581+31C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.677+31C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13447
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3524
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2701
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4056
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

22-39145740-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145740
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145740
    reference: chr 22
allele count: 1
allele frequency: 8.691268751412331e-6
allele num: 115058
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.614+31C>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.476+31C>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.581+31C>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.184+31C>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.677+31C>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.614+31C>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.614+31C>A
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13447
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2930
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

22-39145749-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145749
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145749
    reference: chr 22
allele count: 1
allele frequency: 8.622622311897494e-6
allele num: 115974
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.677+22C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.614+22C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.476+22C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.184+22C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.581+22C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.614+22C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.614+22C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43305
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

22-39145750-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145750
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145750
    reference: chr 22
allele count: 1
allele frequency: 8.618015098762453e-6
allele num: 116036
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.614+21G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.614+21G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.476+21G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.184+21G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.677+21G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.614+21G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.581+21G>A
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43679
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

22-39145753-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145753
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145753
    reference: chr 22
allele count: 1
allele frequency: 8.584575235217362e-6
allele num: 116488
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.677+18C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.581+18C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.614+18C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.476+18C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.184+18C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.614+18C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.614+18C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15028
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2747
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

22-39145756-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145756
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145756
    reference: chr 22
allele count: 2
allele frequency: 1.712768690588336e-5
allele num: 116770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.614+15A>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.184+15A>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.614+15A>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.614+15A>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.677+15A>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.476+15A>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.581+15A>G
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34914
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15569
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4438
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

22-39145758-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145758
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145758
    reference: chr 22
allele count: 1
allele frequency: 8.540584859251161e-6
allele num: 117088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.476+13C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.614+13C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.614+13C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.677+13C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.581+13C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.614+13C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.184+13C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15851
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4625
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

22-39145764-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145764
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145764
    reference: chr 22
allele count: 112
allele frequency: 9.527860484900043e-4
allele num: 117550
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.614+7G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.614+7G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.184+7G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.476+7G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.677+7G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.614+7G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.581+7G>A
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35616
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16326
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 3.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 2.25e1
  variant carriers: 0
hgvs: c.677+7G>A
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ

22-39145765-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145765
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145765
    reference: chr 22
allele count: 315
allele frequency: 2.675522788659181e-3
allele num: 117734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.614+6C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.184+6C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.677+6C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.614+6C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.614+6C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.476+6C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.581+6C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 3.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 35567
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 3.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 16499
  bin: 2.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4668
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 1
hgvs: c.677+6C>T
num of homozygotes: 4
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

22-39145781-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145781
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145781
    reference: chr 22
allele count: 4
allele frequency: 3.370748643273671e-5
allele num: 118668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.604G>A
  hgvsp: ENSP00000415588.1:p.Val202Ile
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.550G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.604G>A
  hgvsp: ENSP00000216064.4:p.Val202Ile
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.604G>A
  hgvsp: ENSP00000383992.1:p.Val202Ile
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.604G>A
  hgvsp: ENSP00000385740.1:p.Val202Ile
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.571G>A
  hgvsp: ENSP00000395601.2:p.Val191Ile
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.466G>A
  hgvsp: ENSP00000406941.1:p.Val156Ile
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.667G>A
  hgvsp: ENSP00000385616.1:p.Val223Ile
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.174G>A
  hgvsp: ENSP00000403694.1:p.Val59Ile
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val223Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

22-39145788-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145788
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145788
    reference: chr 22
allele count: 1
allele frequency: 8.420485356775965e-6
allele num: 118758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.597C>T
  hgvsp: ENST00000406622.1:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.564C>T
  hgvsp: ENST00000411587.2:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.459C>T
  hgvsp: ENST00000438058.1:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.597C>T
  hgvsp: ENST00000405510.1:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.597C>T
  hgvsp: ENST00000456894.1:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.597C>T
  hgvsp: ENST00000216064.4:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.543C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.660C>T
  hgvsp: ENST00000405018.1:c.660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.167C>T
  hgvsp: ENST00000430185.1:c.167C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp220Asp
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

22-39145793-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145793
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145793
    reference: chr 22
allele count: 2
allele frequency: 1.684806415742831e-5
allele num: 118708
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.559C>T
  hgvsp: ENSP00000395601.2:p.Leu187Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.454C>T
  hgvsp: ENSP00000406941.1:p.Leu152Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.592C>T
  hgvsp: ENSP00000385740.1:p.Leu198Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.538C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.655C>T
  hgvsp: ENSP00000385616.1:p.Leu219Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.592C>T
  hgvsp: ENSP00000383992.1:p.Leu198Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.162C>T
  hgvsp: ENSP00000403694.1:p.Leu55Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.592C>T
  hgvsp: ENSP00000415588.1:p.Leu198Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.592C>T
  hgvsp: ENSP00000216064.4:p.Leu198Phe
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36109
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17735
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu219Phe
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

22-39145793-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145793
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145793
    reference: chr 22
allele count: 1
allele frequency: 8.424032078714155e-6
allele num: 118708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.162C>A
  hgvsp: ENSP00000403694.1:p.Leu55Ile
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.592C>A
  hgvsp: ENSP00000415588.1:p.Leu198Ile
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.454C>A
  hgvsp: ENSP00000406941.1:p.Leu152Ile
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.592C>A
  hgvsp: ENSP00000383992.1:p.Leu198Ile
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.559C>A
  hgvsp: ENSP00000395601.2:p.Leu187Ile
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.592C>A
  hgvsp: ENSP00000385740.1:p.Leu198Ile
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.538C>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.592C>A
  hgvsp: ENSP00000216064.4:p.Leu198Ile
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.655C>A
  hgvsp: ENSP00000385616.1:p.Leu219Ile
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36109
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17735
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4934
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu219Ile
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/22-39145795-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145795
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145795
    reference: chr 22
allele count: 2
allele frequency: 1.685885764380605e-5
allele num: 118632
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.590T>G
  hgvsp: ENSP00000385740.1:p.Leu197Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.536T>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.590T>G
  hgvsp: ENSP00000383992.1:p.Leu197Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.160T>G
  hgvsp: ENSP00000403694.1:p.Leu54Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.590T>G
  hgvsp: ENSP00000415588.1:p.Leu197Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.452T>G
  hgvsp: ENSP00000406941.1:p.Leu151Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.557T>G
  hgvsp: ENSP00000395601.2:p.Leu186Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.653T>G
  hgvsp: ENSP00000385616.1:p.Leu218Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.590T>G
  hgvsp: ENSP00000216064.4:p.Leu197Arg
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1804
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu218Arg
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum

22-39145802-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145802
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145802
    reference: chr 22
allele count: 1
allele frequency: 8.464533604198409e-6
allele num: 118140
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.583G>C
  hgvsp: ENSP00000216064.4:p.Ala195Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.153G>C
  hgvsp: ENSP00000403694.1:p.Ala52Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.646G>C
  hgvsp: ENSP00000385616.1:p.Ala216Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.583G>C
  hgvsp: ENSP00000415588.1:p.Ala195Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.550G>C
  hgvsp: ENSP00000395601.2:p.Ala184Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.583G>C
  hgvsp: ENSP00000383992.1:p.Ala195Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.583G>C
  hgvsp: ENSP00000385740.1:p.Ala195Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.445G>C
  hgvsp: ENSP00000406941.1:p.Ala149Pro
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.529G>C
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala216Pro
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

22-39145811-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145811
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145812
    reference: chr 22
allele count: 1
allele frequency: 8.494300324482272e-6
allele num: 117726
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.143dupG
  hgvsp: ENSP00000403694.1:p.Thr49AspfsTer8
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.573dupG
  hgvsp: ENSP00000383992.1:p.Thr192AspfsTer8
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.540dupG
  hgvsp: ENSP00000395601.2:p.Thr181AspfsTer8
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.573dupG
  hgvsp: ENSP00000415588.1:p.Thr192AspfsTer8
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.573dupG
  hgvsp: ENSP00000216064.4:p.Thr192AspfsTer8
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.573dupG
  hgvsp: ENSP00000385740.1:p.Thr192AspfsTer8
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.519dupG
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.636dupG
  hgvsp: ENSP00000385616.1:p.Thr213AspfsTer8
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.435dupG
  hgvsp: ENSP00000406941.1:p.Thr146AspfsTer8
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34468
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr213AspfsTer8
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

22-39145816-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145816
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145816
    reference: chr 22
allele count: 3
allele frequency: 2.558460829964693e-5
allele num: 117258
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.632G>A
  hgvsp: ENSP00000385616.1:p.Arg211His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.515G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.569G>A
  hgvsp: ENSP00000415588.1:p.Arg190His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.569G>A
  hgvsp: ENSP00000216064.4:p.Arg190His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.139G>A
  hgvsp: ENSP00000403694.1:p.Arg47His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.431G>A
  hgvsp: ENSP00000406941.1:p.Arg144His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.569G>A
  hgvsp: ENSP00000385740.1:p.Arg190His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.536G>A
  hgvsp: ENSP00000395601.2:p.Arg179His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.569G>A
  hgvsp: ENSP00000383992.1:p.Arg190His
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33863
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg211His
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

22-39145817-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145817
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145817
    reference: chr 22
allele count: 4
allele frequency: 3.426241584294109e-5
allele num: 116746
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.514C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.568C>T
  hgvsp: ENSP00000383992.1:p.Arg190Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.535C>T
  hgvsp: ENSP00000395601.2:p.Arg179Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.568C>T
  hgvsp: ENSP00000385740.1:p.Arg190Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.138C>T
  hgvsp: ENSP00000403694.1:p.Arg47Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.568C>T
  hgvsp: ENSP00000216064.4:p.Arg190Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.568C>T
  hgvsp: ENSP00000415588.1:p.Arg190Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.430C>T
  hgvsp: ENSP00000406941.1:p.Arg144Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.631C>T
  hgvsp: ENSP00000385616.1:p.Arg211Cys
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg211Cys
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

22-39145824-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145824
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145824
    reference: chr 22
allele count: 1
allele frequency: 8.623068432671082e-6
allele num: 115968
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.561C>G
  hgvsp: ENST00000456894.1:c.561C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.561C>G
  hgvsp: ENST00000406622.1:c.561C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.528C>G
  hgvsp: ENST00000411587.2:c.528C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.131C>G
  hgvsp: ENST00000430185.1:c.131C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.624C>G
  hgvsp: ENST00000405018.1:c.624C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.561C>G
  hgvsp: ENST00000216064.4:c.561C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.507C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.423C>G
  hgvsp: ENST00000438058.1:c.423C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.561C>G
  hgvsp: ENST00000405510.1:c.561C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17892
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr208Thr
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS

22-39145836-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145836
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145836
    reference: chr 22
allele count: 1
allele frequency: 8.901231930499181e-6
allele num: 112344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.549G>A
  hgvsp: ENSP00000415588.1:p.Trp183Ter
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.411G>A
  hgvsp: ENSP00000406941.1:p.Trp137Ter
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.119G>A
  hgvsp: ENSP00000403694.1:p.Trp40Ter
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.549G>A
  hgvsp: ENSP00000383992.1:p.Trp183Ter
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.495G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.549G>A
  hgvsp: ENSP00000385740.1:p.Trp183Ter
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.516G>A
  hgvsp: ENSP00000395601.2:p.Trp172Ter
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.612G>A
  hgvsp: ENSP00000385616.1:p.Trp204Ter
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.549G>A
  hgvsp: ENSP00000216064.4:p.Trp183Ter
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42421
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Trp204Ter
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

22-39145841-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145841
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145841
    reference: chr 22
allele count: 2
allele frequency: 1.818942466849774e-5
allele num: 109954
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.544T>C
  hgvsp: ENSP00000415588.1:p.Trp182Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.511T>C
  hgvsp: ENSP00000395601.2:p.Trp171Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.406T>C
  hgvsp: ENSP00000406941.1:p.Trp136Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.114T>C
  hgvsp: ENSP00000403694.1:p.Trp39Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.544T>C
  hgvsp: ENSP00000385740.1:p.Trp182Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.607T>C
  hgvsp: ENSP00000385616.1:p.Trp203Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.544T>C
  hgvsp: ENSP00000216064.4:p.Trp182Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.544T>C
  hgvsp: ENSP00000383992.1:p.Trp182Arg
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.490T>C
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26844
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16866
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39764
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3852
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Trp203Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

22-39145843-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145843
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145843
    reference: chr 22
allele count: 3
allele frequency: 2.75846849828975e-5
allele num: 108756
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.112A>G
  hgvsp: ENSP00000403694.1:p.Tyr38Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.542A>G
  hgvsp: ENSP00000216064.4:p.Tyr181Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.542A>G
  hgvsp: ENSP00000383992.1:p.Tyr181Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.488A>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.542A>G
  hgvsp: ENSP00000415588.1:p.Tyr181Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.605A>G
  hgvsp: ENSP00000385616.1:p.Tyr202Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.509A>G
  hgvsp: ENSP00000395601.2:p.Tyr170Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.542A>G
  hgvsp: ENSP00000385740.1:p.Tyr181Cys
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.404A>G
  hgvsp: ENSP00000406941.1:p.Tyr135Cys
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6022
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25946
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16401
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1241
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Tyr202Cys
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

22-39145844-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145844
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145844
    reference: chr 22
allele count: 2
allele frequency: 1.839080459770115e-5
allele num: 108750
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.604T>C
  hgvsp: ENSP00000385616.1:p.Tyr202His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.541T>C
  hgvsp: ENSP00000383992.1:p.Tyr181His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.541T>C
  hgvsp: ENSP00000385740.1:p.Tyr181His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.487T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.111T>C
  hgvsp: ENSP00000403694.1:p.Tyr38His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.541T>C
  hgvsp: ENSP00000216064.4:p.Tyr181His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.541T>C
  hgvsp: ENSP00000415588.1:p.Tyr181His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.508T>C
  hgvsp: ENSP00000395601.2:p.Tyr170His
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.403T>C
  hgvsp: ENSP00000406941.1:p.Tyr135His
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6048
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6533
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3756
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10467
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Tyr202His
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ

22-39145847-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145847
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145847
    reference: chr 22
allele count: 1
allele frequency: 9.463244757362404e-6
allele num: 105672
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.400C>T
  hgvsp: ENSP00000406941.1:p.Leu134Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.538C>T
  hgvsp: ENSP00000385740.1:p.Leu180Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.505C>T
  hgvsp: ENSP00000395601.2:p.Leu169Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.538C>T
  hgvsp: ENSP00000216064.4:p.Leu180Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.538C>T
  hgvsp: ENSP00000383992.1:p.Leu180Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.538C>T
  hgvsp: ENSP00000415588.1:p.Leu180Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.601C>T
  hgvsp: ENSP00000385616.1:p.Leu201Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.108C>T
  hgvsp: ENSP00000403694.1:p.Leu37Phe
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.484C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15535
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 889
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3333
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu201Phe
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

22-39145857-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145857
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145857
    reference: chr 22
allele count: 1
allele frequency: 1.006988500191328e-5
allele num: 99306
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.98C>G
  hgvsp: ENST00000430185.1:c.98C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.474C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.528C>G
  hgvsp: ENST00000216064.4:c.528C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.591C>G
  hgvsp: ENST00000405018.1:c.591C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.495C>G
  hgvsp: ENST00000411587.2:c.495C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.390C>G
  hgvsp: ENST00000438058.1:c.390C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.528C>G
  hgvsp: ENST00000405510.1:c.528C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.528C>G
  hgvsp: ENST00000456894.1:c.528C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.528C>G
  hgvsp: ENST00000406622.1:c.528C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10395
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18989
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu197Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-39145862-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145862
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145862
    reference: chr 22
allele count: 3
allele frequency: 3.113260413856085e-5
allele num: 96362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.523C>T
  hgvsp: ENSP00000385740.1:p.Arg175Trp
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.385C>T
  hgvsp: ENSP00000406941.1:p.Arg129Trp
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.469C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.586C>T
  hgvsp: ENSP00000385616.1:p.Arg196Trp
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.93C>T
  hgvsp: ENSP00000403694.1:p.Arg32Trp
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.523C>T
  hgvsp: ENSP00000383992.1:p.Arg175Trp
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.523C>T
  hgvsp: ENSP00000415588.1:p.Arg175Trp
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.490C>T
  hgvsp: ENSP00000395601.2:p.Arg164Trp
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.523C>T
  hgvsp: ENSP00000216064.4:p.Arg175Trp
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13809
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16872
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11544
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11725
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Arg196Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/22-39145864-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145864
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145864
    reference: chr 22
allele count: 3
allele frequency: 3.149937001259975e-5
allele num: 95240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.521G>T
  hgvsp: ENSP00000216064.4:p.Gly174Val
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.521G>T
  hgvsp: ENSP00000415588.1:p.Gly174Val
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.91G>T
  hgvsp: ENSP00000403694.1:p.Gly31Val
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.521G>T
  hgvsp: ENSP00000385740.1:p.Gly174Val
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.488G>T
  hgvsp: ENSP00000395601.2:p.Gly163Val
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.584G>T
  hgvsp: ENSP00000385616.1:p.Gly195Val
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.521G>T
  hgvsp: ENSP00000383992.1:p.Gly174Val
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.467G>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.383G>T
  hgvsp: ENSP00000406941.1:p.Gly128Val
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11346
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly195Val
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

22-39145864-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145864
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145864
    reference: chr 22
allele count: 1
allele frequency: 1.049979000419992e-5
allele num: 95240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.521G>A
  hgvsp: ENSP00000216064.4:p.Gly174Asp
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.521G>A
  hgvsp: ENSP00000385740.1:p.Gly174Asp
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.521G>A
  hgvsp: ENSP00000383992.1:p.Gly174Asp
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.91G>A
  hgvsp: ENSP00000403694.1:p.Gly31Asp
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.584G>A
  hgvsp: ENSP00000385616.1:p.Gly195Asp
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.383G>A
  hgvsp: ENSP00000406941.1:p.Gly128Asp
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.467G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.488G>A
  hgvsp: ENSP00000395601.2:p.Gly163Asp
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.521G>A
  hgvsp: ENSP00000415588.1:p.Gly174Asp
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14435
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly195Asp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP

22-39145879-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145879
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145879
    reference: chr 22
allele count: 1
allele frequency: 1.196286726002488e-5
allele num: 83592
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.584-15T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.521-15T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.383-15T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.521-15T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.488-15T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.521-15T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.467-15T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.91-15T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.521-15T>C
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21741
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15984
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12313
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3751
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

22-39145884-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145884
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145884
    reference: chr 22
allele count: 3
allele frequency: 3.723747579564073e-5
allele num: 80564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.91-20C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.521-20C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.521-20C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.488-20C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.383-20C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.521-20C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.584-20C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.521-20C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.467-20C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22476
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6550
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16777
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30302
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4154
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP

22-39145886-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145886
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145886
    reference: chr 22
allele count: 3
allele frequency: 3.797756791655063e-5
allele num: 78994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.521-22G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.521-22G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.383-22G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.467-22G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.521-22G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.91-22G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.488-22G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.521-22G>A
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.584-22G>A
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22674
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5617
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4226
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30462
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10249
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum

22-39145887-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145887
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145887
    reference: chr 22
allele count: 3
allele frequency: 3.859513701273639e-5
allele num: 77730
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.488-23C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.521-23C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.521-23C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.521-23C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.383-23C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.467-23C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.584-23C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.91-23C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.521-23C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3073
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5945
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22826
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30494
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3964
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

22-39145891-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145891
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145891
    reference: chr 22
allele count: 10
allele frequency: 1.330494944119212e-4
allele num: 75160
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.521-27C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.584-27C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.521-27C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.383-27C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.467-27C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.521-27C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.488-27C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.521-27C>G
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.91-27C>G
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4478
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17764
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23182
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4770
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29984
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1148
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1728
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

22-39145898-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145898
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145898
    reference: chr 22
allele count: 1
allele frequency: 1.412668813923264e-5
allele num: 70788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.521-34T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.584-34T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.467-34T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.383-34T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.521-34T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.488-34T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.91-34T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.521-34T>C
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.521-34T>C
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4323
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22473
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5845
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5053
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2112
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

22-39145900-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39145900
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 39145900
    reference: chr 22
allele count: 60
allele frequency: 8.968341753609757e-4
allele num: 66902
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385616
  ensembl transcript: ENST00000405018
  gene symbol: SUN2
  hgvsc: ENST00000405018.1:c.584-36C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000415588
  ensembl transcript: ENST00000456894
  gene symbol: SUN2
  hgvsc: ENST00000456894.1:c.521-36C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl transcript: ENST00000480307
  gene symbol: SUN2
  hgvsc: ENST00000480307.1:n.467-36C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000395601
  ensembl transcript: ENST00000411587
  gene symbol: SUN2
  hgvsc: ENST00000411587.2:c.488-36C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000403694
  ensembl transcript: ENST00000430185
  gene symbol: SUN2
  hgvsc: ENST00000430185.1:c.91-36C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000385740
  ensembl transcript: ENST00000405510
  gene symbol: SUN2
  hgvsc: ENST00000405510.1:c.521-36C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000406941
  ensembl transcript: ENST00000438058
  gene symbol: SUN2
  hgvsc: ENST00000438058.1:c.383-36C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000383992
  ensembl transcript: ENST00000406622
  gene symbol: SUN2
  hgvsc: ENST00000406622.1:c.521-36C>T
  variant of: http://identifiers.org/hgnc/14210
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100242
  ensembl protein: ENSP00000216064
  ensembl transcript: ENST00000216064
  gene symbol: SUN2
  hgvsc: ENST00000216064.4:c.521-36C>T
  variant of: http://identifiers.org/hgnc/14210
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5376
  bin: 1.75e1
  variant carriers: 15
num of homozygotes: 1
reference allele: G

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1835
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37183
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3005
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2933
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001560811622043e-5
allele num: 66632
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.926040061633282e-4
allele num: 10384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.147e0

DP
type: SiteQuality
SIO_000300: 2.940063e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.28e-2

FS
type: SiteQuality
SIO_000300: 5.42e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.202e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.68e-1

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3681
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3003
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3423
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37184
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1830
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.926040061633282e-4
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.185825410544512e-4
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001200480192077e-5
allele num: 66640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.037e1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

FS
type: SiteQuality
SIO_000300: 5.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.206e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.45e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.940462e6

GenotypeQuality
all individuals: 1870
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3004
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3682
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37178
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2931
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6515
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3425
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500690317546071e-5
allele num: 66636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: 4.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.34e-1

FS
type: SiteQuality
SIO_000300: 1.132e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

QD
type: SiteQuality
SIO_000300: 1.109e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

DP
type: SiteQuality
SIO_000300: 2.939482e6

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2929
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6450
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37178
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500870504892838e-5
allele num: 66628
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 9.43e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e0

DP
type: SiteQuality
SIO_000300: 2.939373e6

FS
type: SiteQuality
SIO_000300: 1.821e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.92e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.064e0

GenotypeQuality
all individuals: 1869
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3667
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3005
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2931
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37177
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500915558490679e-5
allele num: 66626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.3e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.016e1

MQRankSum
type: SiteQuality
SIO_000300: 8.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.658e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.833e0

DP
type: SiteQuality
SIO_000300: 2.939153e6

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1868
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3424
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1830
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3004
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2932
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.118e0

DP
type: SiteQuality
SIO_000300: 2.939198e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 7.85e0

VQSLOD
type: SiteQuality
SIO_000300: -1.306e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.52e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

FS
type: SiteQuality
SIO_000300: 2.443e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.83e0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3425
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2930
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37180
bin: 9.75e1
variant carriers: 41

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6485
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1829
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1868
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.314279102059708e-4
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 38
allele frequency: 5.703650336215178e-4
allele num: 66624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.15e-1

DP
type: SiteQuality
SIO_000300: 2.942324e6

VQSLOD
type: SiteQuality
SIO_000300: 2.45e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-2

FS
type: SiteQuality
SIO_000300: 5.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.76e-1

QD
type: SiteQuality
SIO_000300: 1.03e1

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2999
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1825
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 369
allele frequency: 3.555598381190981e-2
allele num: 10378
num of homozygotes: 4

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.915629322268327e-4
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500870504892838e-5
allele num: 66628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.4e0

FS
type: SiteQuality
SIO_000300: 5.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

MQRankSum
type: SiteQuality
SIO_000300: 3.21e-1

DP
type: SiteQuality
SIO_000300: 2.965173e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.98e-2

QD
type: SiteQuality
SIO_000300: 1.322e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.46e-1

GenotypeQuality
all individuals: 2999
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6503
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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QD
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MQ
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501321162623108e-5
allele num: 66608
num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
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FS
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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QD
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ReadPosRankSum
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SIO_000300: 6.74e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 3.587962962962963e-3
allele num: 8640
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South Asian
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allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.504504504504505e-5
allele num: 66600
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.947e1

VQSLOD
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QD
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FS
type: SiteQuality
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MQRankSum
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DP
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SIO_000300: 2.929465e6

ClippingRankSum
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SIO_000300: -3.7e-1

BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66564
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10356
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East Asian
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allele count: 5
allele frequency: 5.785697755149271e-4
allele num: 8642
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 9.85e-1

ClippingRankSum
type: SiteQuality
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FS
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BaseQRankSum
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QD
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ReadPosRankSum
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SIO_000300: -3.28e-1

DP
type: SiteQuality
SIO_000300: 2.922809e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.005168890491646e-5
allele num: 66552
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10358
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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DP
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ReadPosRankSum
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MQ
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QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -8.1e-2

FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502810255177181e-5
allele num: 66542
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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BaseQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502810255177181e-5
allele num: 66542
num of homozygotes: 0

East Asian
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Other
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MQ
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VQSLOD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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DP
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FS
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QD
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66536
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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South Asian
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African
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East Asian
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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FS
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QD
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DP
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.658103148541626e-5
allele num: 10354
num of homozygotes: 0

Other
type: Population
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 11
allele frequency: 1.653240351088133e-4
allele num: 66536
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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QD
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FS
type: SiteQuality
SIO_000300: 1.324e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

MQRankSum
type: SiteQuality
SIO_000300: 3.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.019e0

GenotypeQuality
all individuals: 3428
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504438092372499e-5
allele num: 66470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.047e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.35e-1

QD
type: SiteQuality
SIO_000300: 9.460000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

MQRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

FS
type: SiteQuality
SIO_000300: 6.889999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.917014e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e0

GenotypeQuality
all individuals: 5797
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.053518752633797e-4
allele num: 66444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.95e1

MQRankSum
type: SiteQuality
SIO_000300: -3.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.83e0

FS
type: SiteQuality
SIO_000300: 7.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 2.915576e6

QD
type: SiteQuality
SIO_000300: 1.253e1

GenotypeQuality
all individuals: 40
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3509
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 25

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 71
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variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 3.009691205682297e-4
allele num: 66452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.939864209505335e-4
allele num: 10310
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.915312e6

VQSLOD
type: SiteQuality
SIO_000300: 4.31e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.68e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 1.258e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.741e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e-1

GenotypeQuality
all individuals: 3016
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
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variant carriers: 0

GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 39
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GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 5876
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GenotypeQuality
all individuals: 66
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variant carriers: 0

GenotypeQuality
all individuals: 27
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GenotypeQuality
all individuals: 3429
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variant carriers: 0

GenotypeQuality
all individuals: 164
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variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.354850364304209e-4
allele num: 66428
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730702665282105e-4
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e-1

DP
type: SiteQuality
SIO_000300: 2.913955e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.82e0

FS
type: SiteQuality
SIO_000300: 1.596e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.322e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e0

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1793
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2912
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variant carriers: 0

GenotypeQuality
all individuals: 217
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variant carriers: 0

GenotypeQuality
all individuals: 459
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variant carriers: 0

GenotypeQuality
all individuals: 240
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 37002
bin: 9.75e1
variant carriers: 117

GenotypeQuality
all individuals: 3460
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variant carriers: 0

GenotypeQuality
all individuals: 1877
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variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 107
allele frequency: 1.038230157189986e-2
allele num: 10306
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.057459328487366e-4
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66392
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.83e-1

DP
type: SiteQuality
SIO_000300: 2.91101e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.034e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.54e0

MQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

QD
type: SiteQuality
SIO_000300: 1.272e1

GenotypeQuality
all individuals: 3410
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2913
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 240
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GenotypeQuality
all individuals: 277
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GenotypeQuality
all individuals: 3432
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variant carriers: 0

GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 3014
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36947
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50652324565368e-5
allele num: 66378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.44e0

MQRankSum
type: SiteQuality
SIO_000300: -1.357e0

VQSLOD
type: SiteQuality
SIO_000300: -1.107e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.135e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.324e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.975e1

DP
type: SiteQuality
SIO_000300: 2.905248e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

GenotypeQuality
all individuals: 5365
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3358
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GenotypeQuality
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GenotypeQuality
all individuals: 1878
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GenotypeQuality
all individuals: 292
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GenotypeQuality
all individuals: 132
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variant carriers: 0

GenotypeQuality
all individuals: 57
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3431
bin: 9.25e1
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GenotypeQuality
all individuals: 116
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66338
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.473026163463765e-4
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e0

FS
type: SiteQuality
SIO_000300: 2.123e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

DP
type: SiteQuality
SIO_000300: 2.903348e6

QD
type: SiteQuality
SIO_000300: 1.293e1

VQSLOD
type: SiteQuality
SIO_000300: 3.66e0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 259
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variant carriers: 0

GenotypeQuality
all individuals: 305
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variant carriers: 0

GenotypeQuality
all individuals: 151
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GenotypeQuality
all individuals: 2906
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variant carriers: 0

GenotypeQuality
all individuals: 3431
bin: 9.25e1
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GenotypeQuality
all individuals: 36943
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 146
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1777
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1878
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818402230573403e-4
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731002250302925e-4
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.261403102570039e-4
allele num: 8638
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.66e0

FS
type: SiteQuality
SIO_000300: 2.123e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 2.903348e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e0

QD
type: SiteQuality
SIO_000300: 1.293e1

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5474
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.75e1
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GenotypeQuality
all individuals: 262
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 109
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3363
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1880
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3427
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.789510126363164e-4
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.014318010550113e-5
allele num: 66350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.285e0

MQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.0e0

DP
type: SiteQuality
SIO_000300: 2.902704e6

QD
type: SiteQuality
SIO_000300: 1.58e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 101
bin: 5.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 5581
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3014
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e-1

DP
type: SiteQuality
SIO_000300: 2.90217e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.315e0

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 2.275e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.268e1

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.01e-1

GenotypeQuality
all individuals: 131
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5297
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66354
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.855e0

FS
type: SiteQuality
SIO_000300: 2.372e0

VQSLOD
type: SiteQuality
SIO_000300: 6.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.24e-1

QD
type: SiteQuality
SIO_000300: 1.606e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.898167e6

GenotypeQuality
all individuals: 56
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 162
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GenotypeQuality
all individuals: 85
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66344
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.569e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: 6.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 2.898168e6

QD
type: SiteQuality
SIO_000300: 1.203e1

MQRankSum
type: SiteQuality
SIO_000300: -9.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e0

MQ
type: SiteQuality
SIO_000300: 5.903e1

GenotypeQuality
all individuals: 1749
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 28

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 2888
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GenotypeQuality
all individuals: 1867
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.944768572539868e-4
allele num: 10284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 3.918967804172193e-4
allele num: 66344
num of homozygotes: 1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.82e0

MQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.29e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.501e1

DP
type: SiteQuality
SIO_000300: 2.896111e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

GenotypeQuality
all individuals: 551
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
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GenotypeQuality
all individuals: 356
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variant carriers: 0

GenotypeQuality
all individuals: 362
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variant carriers: 0

GenotypeQuality
all individuals: 36896
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2827
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variant carriers: 0

GenotypeQuality
all individuals: 3415
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variant carriers: 0

GenotypeQuality
all individuals: 1846
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GenotypeQuality
all individuals: 1695
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variant carriers: 0

GenotypeQuality
all individuals: 3041
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2991
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66282
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21300339640951e-4
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.515610791148833e-4
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.644e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-1

FS
type: SiteQuality
SIO_000300: 8.977e0

DP
type: SiteQuality
SIO_000300: 2.884535e6

VQSLOD
type: SiteQuality
SIO_000300: -4.504e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3407
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1140
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variant carriers: 0

GenotypeQuality
all individuals: 545
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variant carriers: 0

GenotypeQuality
all individuals: 515
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GenotypeQuality
all individuals: 1851
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variant carriers: 0

GenotypeQuality
all individuals: 528
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variant carriers: 0

GenotypeQuality
all individuals: 49
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variant carriers: 0

GenotypeQuality
all individuals: 2681
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3188
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2971
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36877
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 6.076810889645114e-5
allele num: 16456
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.880793e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-2

QD
type: SiteQuality
SIO_000300: 1.516e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.7e-2

GenotypeQuality
all individuals: 5064
bin: 5.25e1
variant carriers: 7

GenotypeQuality
all individuals: 3833
bin: 6.75e1
variant carriers: 8

GenotypeQuality
all individuals: 5245
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 476
bin: 8.25e1
variant carriers: 9

GenotypeQuality
all individuals: 298
bin: 1.25e1
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GenotypeQuality
all individuals: 1473
bin: 5.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1011
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variant carriers: 4

GenotypeQuality
all individuals: 5699
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 178
bin: 9.25e1
variant carriers: 8

GenotypeQuality
all individuals: 185
bin: 8.75e1
variant carriers: 15

European (Non-Finnish)
type: Population
allele count: 104
allele frequency: 1.657793222176172e-3
allele num: 62734
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 7.352941176470588e-3
allele num: 816
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 1.951695535496463e-3
allele num: 8198
num of homozygotes: 0

African
type: Population
allele count: 17
allele frequency: 1.719951436665318e-3
allele num: 9884
num of homozygotes: 0

Latino
type: Population
allele count: 876
allele frequency: 8.121639161876507e-2
allele num: 10786
num of homozygotes: 29

European (Finnish)
type: Population
allele count: 54
allele frequency: 9.84323733138899e-3
allele num: 5486
num of homozygotes: 0

South Asian
type: Population
allele count: 27
allele frequency: 1.724798773476428e-3
allele num: 15654
num of homozygotes: 1

VQSLOD
type: SiteQuality
SIO_000300: 6.5e0

QD
type: SiteQuality
SIO_000300: 1.522e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-2

DP
type: SiteQuality
SIO_000300: 1.20783e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.19e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 148
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
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GenotypeQuality
all individuals: 462
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GenotypeQuality
all individuals: 335
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GenotypeQuality
all individuals: 854
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GenotypeQuality
all individuals: 2282
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variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3916
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variant carriers: 0

GenotypeQuality
all individuals: 5117
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variant carriers: 0

GenotypeQuality
all individuals: 1851
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.177932437156386e-5
allele num: 62934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8240
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10978
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

DP
type: SiteQuality
SIO_000300: 1.236393e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.095e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.05e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

QD
type: SiteQuality
SIO_000300: 9.51e0

GenotypeQuality
all individuals: 193
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3708
bin: 2.25e1
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GenotypeQuality
all individuals: 3732
bin: 3.75e1
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GenotypeQuality
all individuals: 381
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GenotypeQuality
all individuals: 3940
bin: 6.75e1
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GenotypeQuality
all individuals: 917
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GenotypeQuality
all individuals: 34986
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9968
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11024
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.322711178553364e-5
allele num: 15816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.289176e6

MQRankSum
type: SiteQuality
SIO_000300: -7.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.244e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.64e-1

QD
type: SiteQuality
SIO_000300: 1.339e1

GenotypeQuality
all individuals: 3928
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
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variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.25e1
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GenotypeQuality
all individuals: 687
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GenotypeQuality
all individuals: 737
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 370
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GenotypeQuality
all individuals: 1440
bin: 4.75e1
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GenotypeQuality
all individuals: 895
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variant carriers: 0

GenotypeQuality
all individuals: 3253
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.337938902268983e-5
allele num: 15778
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63346
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.207146306132303e-4
allele num: 8284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.067827348567283e-5
allele num: 11028
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9962
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.619e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.24e-1

QD
type: SiteQuality
SIO_000300: 1.294e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -8.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.906e0

DP
type: SiteQuality
SIO_000300: 1.308532e6

GenotypeQuality
all individuals: 39326
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1652
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 788
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2930
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8308
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.263423878711308e-4
allele num: 15830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.575845441079139e-5
allele num: 63458
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.49e-1

FS
type: SiteQuality
SIO_000300: 1.184e0

QD
type: SiteQuality
SIO_000300: 1.39e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 1.321518e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.48e-1

GenotypeQuality
all individuals: 141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2701
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1652
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3524
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4056
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15830
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.048136083966703e-5
allele num: 11052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63458
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQRankSum
type: SiteQuality
SIO_000300: -5.93e-1

DP
type: SiteQuality
SIO_000300: 1.321518e6

VQSLOD
type: SiteQuality
SIO_000300: 5.49e-1

FS
type: SiteQuality
SIO_000300: 1.184e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

QD
type: SiteQuality
SIO_000300: 1.39e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e0

GenotypeQuality
all individuals: 1819
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3034
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4319
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 73
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15924
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63974
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.989572096368213e-5
allele num: 11124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10032
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.613e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

FS
type: SiteQuality
SIO_000300: 2.884e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.365968e6

QD
type: SiteQuality
SIO_000300: 6.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.739e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.850000000000001e-1

GenotypeQuality
all individuals: 130
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4317
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2965
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1288
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10038
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.981498113885396e-5
allele num: 11134
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15932
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 6.21e0

FS
type: SiteQuality
SIO_000300: 2.884e0

VQSLOD
type: SiteQuality
SIO_000300: -8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.371877e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.161e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.96e-1

GenotypeQuality
all individuals: 150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4413
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45220
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.930486593843098e-5
allele num: 10070
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16000
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.412e0

FS
type: SiteQuality
SIO_000300: 1.091e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e0

VQSLOD
type: SiteQuality
SIO_000300: -3.679e0

DP
type: SiteQuality
SIO_000300: 1.385438e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.64e-1

QD
type: SiteQuality
SIO_000300: 2.679e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

GenotypeQuality
all individuals: 861
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 689
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44894
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2566
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11204
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.235969069593415e-5
allele num: 16036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552072016141549e-5
allele num: 64430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.39692e6

QD
type: SiteQuality
SIO_000300: 1.289e1

MQ
type: SiteQuality
SIO_000300: 5.939e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

GenotypeQuality
all individuals: 776
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1028
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2458
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46098
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16074
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.180080245456691e-4
allele num: 8474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5776
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.659999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.403027e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

QD
type: SiteQuality
SIO_000300: 1.079e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

GenotypeQuality
all individuals: 873
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47070
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1016
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 9.75e1
variant carriers: 111

GenotypeQuality
all individuals: 539
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 7
allele frequency: 6.192498230714791e-4
allele num: 11304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 102
allele frequency: 1.573976915005247e-3
allele num: 64804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.441156228492773e-4
allele num: 5812
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.897070467141726e-5
allele num: 10104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.34e0

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-3

FS
type: SiteQuality
SIO_000300: 1.254e0

DP
type: SiteQuality
SIO_000300: 1.419022e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.196e0

QD
type: SiteQuality
SIO_000300: 1.232e1

MQ
type: SiteQuality
SIO_000300: 5.981e1

GenotypeQuality
all individuals: 268
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2081
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 147
bin: 9.25e1
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GenotypeQuality
all individuals: 47305
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 980
bin: 9.75e1
variant carriers: 308

Other
type: Population
allele count: 1
allele frequency: 1.160092807424594e-3
allele num: 862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

African
type: Population
allele count: 298
allele frequency: 2.941176470588235e-2
allele num: 10132
num of homozygotes: 4

Latino
type: Population
allele count: 14
allele frequency: 1.238499646142958e-3
allele num: 11304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.081569135003544e-5
allele num: 64902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16180
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.07e-2

DP
type: SiteQuality
SIO_000300: 1.426505e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.3e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

MQRankSum
type: SiteQuality
SIO_000300: 3.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.03e0

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 371
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.965795164143896e-4
allele num: 10174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.224589762429586e-4
allele num: 16332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5940
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.352e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.859e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.058e1

MQ
type: SiteQuality
SIO_000300: 5.931e1

DP
type: SiteQuality
SIO_000300: 1.443992e6

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5950
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527977263698316e-5
allele num: 65446
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.865e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.58e-1

QD
type: SiteQuality
SIO_000300: 1.112e1

MQ
type: SiteQuality
SIO_000300: 5.88e1

DP
type: SiteQuality
SIO_000300: 1.445979e6

VQSLOD
type: SiteQuality
SIO_000300: -6.883e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.227e0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 180
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.222493887530562e-4
allele num: 16360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5936
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.445964e6

FS
type: SiteQuality
SIO_000300: 1.535e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.152e0

MQ
type: SiteQuality
SIO_000300: 5.662e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.04e-1

QD
type: SiteQuality
SIO_000300: 7.54e0

GenotypeQuality
all individuals: 130
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variant carriers: 0

GenotypeQuality
all individuals: 689
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variant carriers: 1

GenotypeQuality
all individuals: 64
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 142
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variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.850275807722617e-5
allele num: 10152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5936
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65428
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.16e0

DP
type: SiteQuality
SIO_000300: 1.445964e6

QD
type: SiteQuality
SIO_000300: 7.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.04e-1

FS
type: SiteQuality
SIO_000300: 1.535e0

MQRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.152e0

MQ
type: SiteQuality
SIO_000300: 5.662e1

GenotypeQuality
all individuals: 242
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 143
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GenotypeQuality
all individuals: 152
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.337540906965872e-4
allele num: 8556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16356
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65400
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.444966e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.05e-1

MQ
type: SiteQuality
SIO_000300: 5.847e1

VQSLOD
type: SiteQuality
SIO_000300: -1.573e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.94e-1

FS
type: SiteQuality
SIO_000300: 4.345e0

QD
type: SiteQuality
SIO_000300: 1.092e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 7.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 83
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53444836581249e-5
allele num: 65170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5818
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.19e-1

DP
type: SiteQuality
SIO_000300: 1.438932e6

VQSLOD
type: SiteQuality
SIO_000300: 9.88e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.5e-2

QD
type: SiteQuality
SIO_000300: 1.124e1

FS
type: SiteQuality
SIO_000300: 6.879999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.524e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.819897689186806e-5
allele num: 11338
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5790
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10026
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

FS
type: SiteQuality
SIO_000300: 5.153e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

QD
type: SiteQuality
SIO_000300: 1.327e1

MQ
type: SiteQuality
SIO_000300: 6.031e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

DP
type: SiteQuality
SIO_000300: 1.433324e6

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.854258898530193e-5
allele num: 11294
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.355157795572303e-4
allele num: 8492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64728
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.42798e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-2

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -6.48e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.47e0

GenotypeQuality
all individuals: 470
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 690
bin: 9.75e1
variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.183712121212121e-4
allele num: 8448
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.239925604463732e-4
allele num: 16130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11252
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551927493947483e-5
allele num: 64436
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-2

QD
type: SiteQuality
SIO_000300: 1.137e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 6.119e0

DP
type: SiteQuality
SIO_000300: 1.42115e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-2

MQ
type: SiteQuality
SIO_000300: 5.913e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.93e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.01419878296146e-4
allele num: 9860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11152
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16046
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64040
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5628
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.091e0

QD
type: SiteQuality
SIO_000300: 1.106e1

MQ
type: SiteQuality
SIO_000300: 5.936e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e0

MQRankSum
type: SiteQuality
SIO_000300: 2.88e-1

DP
type: SiteQuality
SIO_000300: 1.41091e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.836e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

FS
type: SiteQuality
SIO_000300: 6.673e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10748
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.611188090097638e-5
allele num: 62066
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.18e-1

FS
type: SiteQuality
SIO_000300: 7.381e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.187e0

DP
type: SiteQuality
SIO_000300: 1.361453e6

QD
type: SiteQuality
SIO_000300: 1.447e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.42e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60914
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.303950971443474e-4
allele num: 15338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7890
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.324029e6

FS
type: SiteQuality
SIO_000300: 3.751e0

MQRankSum
type: SiteQuality
SIO_000300: 5.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.67e-1

QD
type: SiteQuality
SIO_000300: 1.084e1

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 403
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GenotypeQuality
all individuals: 304
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7764
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.97694017717907e-5
allele num: 60278
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.75e-1

FS
type: SiteQuality
SIO_000300: 2.596e0

QD
type: SiteQuality
SIO_000300: 1.327e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.62e0

MQRankSum
type: SiteQuality
SIO_000300: -4.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

DP
type: SiteQuality
SIO_000300: 1.305715e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

GenotypeQuality
all individuals: 243
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1303
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 140
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5128
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15204
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.318841060701603e-5
allele num: 60262
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9332
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

VQSLOD
type: SiteQuality
SIO_000300: -6.002e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.77e-1

QD
type: SiteQuality
SIO_000300: 1.707e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

DP
type: SiteQuality
SIO_000300: 1.305282e6

FS
type: SiteQuality
SIO_000300: 4.503e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 13231
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.348072256672958e-4
allele num: 7418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4970
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9844
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

MQ
type: SiteQuality
SIO_000300: 5.217e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.080000000000001e-1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 7.17e0

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.665e0

VQSLOD
type: SiteQuality
SIO_000300: -1.388e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.811200463667319e-5
allele num: 55212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14368
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4592
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.399e0

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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BaseQRankSum
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
all individuals: 616
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.595135961803872e-5
allele num: 53618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.963e0

MQRankSum
type: SiteQuality
SIO_000300: -1.077e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

QD
type: SiteQuality
SIO_000300: 1.05e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.112299e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

VQSLOD
type: SiteQuality
SIO_000300: 2.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

GenotypeQuality
all individuals: 2515
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1102
bin: 3.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14006
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.657601931128126e-5
allele num: 53026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8396
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

QD
type: SiteQuality
SIO_000300: 1.299e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.867e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.56e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

FS
type: SiteQuality
SIO_000300: 1.563e0

DP
type: SiteQuality
SIO_000300: 1.093138e6

MQRankSum
type: SiteQuality
SIO_000300: -1.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.885867310376042e-5
allele num: 53026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14006
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.56e-1

QD
type: SiteQuality
SIO_000300: 1.299e1

MQRankSum
type: SiteQuality
SIO_000300: -1.08e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 1.563e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.867e0

DP
type: SiteQuality
SIO_000300: 1.093138e6

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 423
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variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.15740421125302e-5
allele num: 46352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13134
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.805e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

QD
type: SiteQuality
SIO_000300: 1.055e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.6e-3

DP
type: SiteQuality
SIO_000300: 8.98588e5

ClippingRankSum
type: SiteQuality
SIO_000300: -5.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.613e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 401
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7144
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 5.966587112171838e-4
allele num: 5028
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44698
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.77e-1

QD
type: SiteQuality
SIO_000300: 1.232e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.524e0

MQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.58089e5

GenotypeQuality
all individuals: 1350
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 136
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.833307222309259e-5
allele num: 12766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4870
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.10077519379845e-4
allele num: 6450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3484
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.554e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.28e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

FS
type: SiteQuality
SIO_000300: 6.278e0

DP
type: SiteQuality
SIO_000300: 8.42044e5

QD
type: SiteQuality
SIO_000300: 1.74e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6936
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4772
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.965405154399815e-5
allele num: 43070
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12632
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.279e0

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.113e-1

DP
type: SiteQuality
SIO_000300: 8.32212e5

QD
type: SiteQuality
SIO_000300: 7.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.946e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.11e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
all individuals: 197
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.200883850513978e-4
allele num: 41636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 7.400828892835998e-4
allele num: 6756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3256
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6018
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.92216e5

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.913e1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.58e-1

QD
type: SiteQuality
SIO_000300: 1.225e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.21e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1054
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GenotypeQuality
all individuals: 4680
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GenotypeQuality
all individuals: 332
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.546343450804645e-5
allele num: 39272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3026
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.46e-2

DP
type: SiteQuality
SIO_000300: 7.45667e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

VQSLOD
type: SiteQuality
SIO_000300: -9.886e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

MQ
type: SiteQuality
SIO_000300: 5.883e1

QD
type: SiteQuality
SIO_000300: 1.525e1